3TL8B

The avrptob-bak1 complex reveals two structurally similar kinaseinteracting domains in a single type iii effector
Total Genus 24

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
87
structure length
87
Chain Sequence
IRVDRAAMRNRGNDEADAALRGLVQQGVNLEHLRTALERHVMQRLPIPLDIGSALQNVGINPSIDLGESLVQHPLLNLNVALNRMLG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase/ligase
source organism Arabidopsis thaliana
publication title Structural Analysis of Pseudomonas syringae AvrPtoB Bound to Host BAK1 Reveals Two Similar Kinase-Interacting Domains in a Type III Effector.
pubmed doi rcsb
molecule keywords BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
total genus 24
structure length 87
sequence length 87
chains with identical sequence F, K, L
ec nomenclature
pdb deposition date 2011-08-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF16847 AvrPtoB_bdg Avirulence AvrPtoB, BAK1-binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.220 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 3tl8B00
3TL8B 2LF6A 2LF3A
chains in the Genus database with same CATH superfamily
2P1QB 3LD8A 2JHPA 4M3TA 1FZHE 2H4TA 3CQ8A 4EP9A 2VJ4A 3HL8A 3OGLB 1FZ1E 2MW2A 2P1OB 1FXXA 4DTXA 3KD1E 4RNGA 5IREA 4RG8A 1LDKE 4AKHA 4KHNA 1MHZG 3TABA 4FJ9A 4X5NA 1WAFA 4IT5A 3UIQA 4KHYA 4HCCA 3SQ4A 3E4WA 1XVFE 3NCIA 1FPOA 3N1BA 3RMDA 4FJNA 5IBKB 3UO3A 3SQ1A 4FK0A 3L1NA 3SVIA 3J27A 4AI6A 3OGMB 4JS5A 3QEWA 2K5SA 3RMCA 2JH8A 4JRQA 2P1MB 1Q9YA 4ADNA 4FJIA 3NE6A 4M3YA 4M41A 3L2OB 4E4BA 1FZ6E 4ICGC 3QERA 1FZ9E 4EPHA 4AKGA 3QNNA 2ATQA 4I6JB 1XMGE 2DEBA 4I9QA 2QXFA 3CFOA 4FJ5A 3C6OB 1FZ5E 1XVDE 1MHYG 3NAEA 3L0MA 3N1EA 4I9LA 4DTMA 4HCBA 2MZWB 4FJKA 4M3XA 3SUQA 3NHGA 4DTRA 3SNNA 2VJ5A 3SJJA 2E32A 1MTYG 3QETA 3RWUA 3TAFA 1Q9XA 3KD5E 3QESA 2FYOA 4FJJA 1XMHE 4FK4A 2JHCA 3SI6A 2JQTA 2LF6A 2E31A 1XU5E 2MMBA 3SPYA 1XVBE 3OGKB 5IZ7A 3RMAA 1XVEE 3TAEA 4M42A 4J2DA 3LDSA 4J2BA 3LZJA 4FJGA 3QEIA 4M3ZA 4DTNA 1WAJA 4DU1A 4GAMC 1IG9A 3V7DB 3QEVA 4JRPA 4J2AA 2OZMA 3UO2A 2OVRB 4FJ8A 2DTUA 2B7MA 3HGKE 3NGIA 1XMFE 1P22A 2OYQA 1FZ4E 4M3UA 2HD0A 4FJXA 3C95A 2JH9A 3J2PA 2JPNA 2OVPB 1FZ3E 4RL5A 1FZ7E 4ADOA 4M45A 2RKHA 4KI4A 3RMBA 2B8IA 3SUNA 3SQ0A 4KHSA 4FJLA 4DTUA 1XVCE 2P5OA 3C6NB 4M3WA 4FJMA 2FW3A 1XL3C 3E4YA 4DU3A 3SQ2A 3SPZA 4DTOA 3K2OA 2P5GA 3BVOA 4J2EA 4DTPA 3L8BA 1N1CA 4KHQA 3CFPA 3C94A 4KHUA 4B08A 2OZSA 4JS4A 3HP9A 1CLQA 5H37A 4AKIA 4DTSA 2JHAA 3SUOA 2YB5A 3S9HA 3TJYA 3QEXA 3TL8B 1IH7A 3SUPA 3C6PB 3TAGA 2PFTA 1FS1A 4E3SA 1FZ8E 4X5MA 3LDBA 3LZIA 1FZIE 3MKSB 3WSOA 4M3RA 4EYWA 4FJ7A 1XVGE 3HGLA 3SCXA 2PFVA 1MMOG 2DY4A 2OVQB 4QNCA 2VIXA 2B1EA 2P1PB 3CFRA 4DTJA 1JW2A 3NDKA 3QEPA 2P1NB 1XU3E 4FJHA 4KI6A 2RCUA 4KHWA 1FZ2E 4FVMA 4DU4A 1FYZE 1FZ0E 1NEXB 4QNDA 2LF3A 4FK2A 3QNOA
chains in the Genus database with same CATH topology
2P1QB 3LD8A 2JHPA 4M3TA 1FZHE 2H4TA 3CQ8A 4EP9A 2VJ4A 3HL8A 3OGLB 1FZ1E 4DTXA 2P1OB 1FXXA 3KD1E 4RNGA 5IREA 4RG8A 1LDKE 4AKHA 4KHNA 1MHZG 3TABA 4FJ9A 4X5NA 1WAFA 3UIQA 4KHYA 4HCCA 3SQ4A 3E4WA 1XVFE 3NCIA 3RMDA 3N1BA 4FJNA 5IBKB 3SQ1A 4FK0A 3L1NA 3SVIA 3J27A 4AI6A 3OGMB 4JS5A 3QEWA 3RMCA 4FJIA 2JH8A 4JRQA 2P1MB 1Q9YA 4ADNA 3NE6A 4M3YA 4M41A 3L2OB 4E4BA 1FZ6E 3QERA 1FZ9E 4EPHA 4AKGA 3QNNA 2ATQA 4I6JB 1XMGE 2DEBA 4I9QA 2QXFA 3CFOA 4FJ5A 3C6OB 1FZ5E 1XVDE 1MHYG 3NAEA 3L0MA 3N1EA 4I9LA 4DTMA 4HCBA 2MZWB 4FJKA 4M3XA 3SUQA 3NHGA 4DTRA 3SNNA 2VJ5A 3SJJA 2E32A 1MTYG 3QETA 3RWUA 3TAFA 1Q9XA 3KD5E 3QESA 2FYOA 4FJJA 1XMHE 4FK4A 2JHCA 3SI6A 2LF6A 2E31A 1XU5E 2MMBA 3SPYA 1XVBE 3OGKB 5IZ7A 3RMAA 1XVEE 3TAEA 4M42A 4J2DA 3LDSA 4J2BA 3LZJA 4FJGA 3QEIA 4M3ZA 4DTNA 1WAJA 4DU1A 4GAMC 1IG9A 3V7DB 3QEVA 4JRPA 4J2AA 2OZMA 2OVRB 4FJ8A 2DTUA 2B7MA 3HGKE 3NGIA 1XMFE 1P22A 2OYQA 1FZ4E 4M3UA 2HD0A 4FJXA 3C95A 2JH9A 3J2PA 2JPNA 2OVPB 1FZ3E 4RL5A 1FZ7E 4ADOA 4M45A 4KI4A 3RMBA 2B8IA 3SUNA 3SQ0A 4KHSA 4FJLA 4DTUA 1XVCE 2P5OA 3C6NB 4M3WA 4FJMA 2FW3A 1XL3C 3E4YA 4DU3A 3SQ2A 3SPZA 4DTOA 3K2OA 2P5GA 4J2EA 4DTPA 3L8BA 4KHQA 3CFPA 3C94A 4KHUA 4B08A 2OZSA 4JS4A 3HP9A 1CLQA 5H37A 4AKIA 4DTSA 2JHAA 3SUOA 2YB5A 3S9HA 3TJYA 3QEXA 3TL8B 1IH7A 3SUPA 3C6PB 3TAGA 2PFTA 1FS1A 4E3SA 1FZ8E 4X5MA 3LDBA 3LZIA 1FZIE 3MKSB 3WSOA 4M3RA 4EYWA 4FJ7A 1XVGE 3HGLA 3SCXA 2PFVA 1MMOG 2DY4A 2OVQB 4QNCA 2VIXA 2B1EA 2P1PB 3CFRA 4DTJA 3NDKA 3QEPA 2P1NB 1XU3E 4FJHA 4KI6A 2RCUA 4KHWA 1FZ2E 4FVMA 4DU4A 1FYZE 1FZ0E 1NEXB 4QNDA 2LF3A 4FK2A 3QNOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TL8 B;  2LF6 A;  2LF3 A; 
#chains in the Genus database with same CATH topology
 2P1Q B;  3LD8 A;  2JHP A;  4M3T A;  1FZH E;  2H4T A;  3CQ8 A;  4EP9 A;  2VJ4 A;  3HL8 A;  3OGL B;  1FZ1 E;  2MW2 A;  2P1O B;  1FXX A;  4DTX A;  3KD1 E;  4RNG A;  5IRE A;  4RG8 A;  1LDK E;  4AKH A;  4KHN A;  1MHZ G;  3TAB A;  4FJ9 A;  4X5N A;  1WAF A;  4IT5 A;  3UIQ A;  4KHY A;  4HCC A;  3SQ4 A;  3E4W A;  1XVF E;  3NCI A;  1FPO A;  3N1B A;  3RMD A;  4FJN A;  5IBK B;  3UO3 A;  3SQ1 A;  4FK0 A;  3L1N A;  3SVI A;  3J27 A;  4AI6 A;  3OGM B;  4JS5 A;  3QEW A;  2K5S A;  3RMC A;  2JH8 A;  4JRQ A;  2P1M B;  1Q9Y A;  4ADN A;  4FJI A;  3NE6 A;  4M3Y A;  4M41 A;  3L2O B;  4E4B A;  1FZ6 E;  4ICG C;  3QER A;  1FZ9 E;  4EPH A;  4AKG A;  3QNN A;  2ATQ A;  4I6J B;  1XMG E;  2DEB A;  4I9Q A;  2QXF A;  3CFO A;  4FJ5 A;  3C6O B;  1FZ5 E;  1XVD E;  1MHY G;  3NAE A;  3L0M A;  3N1E A;  4I9L A;  4DTM A;  4HCB A;  2MZW B;  4FJK A;  4M3X A;  3SUQ A;  3NHG A;  4DTR A;  3SNN A;  2VJ5 A;  3SJJ A;  2E32 A;  1MTY G;  3QET A;  3RWU A;  3TAF A;  1Q9X A;  3KD5 E;  3QES A;  2FYO A;  4FJJ A;  1XMH E;  4FK4 A;  2JHC A;  3SI6 A;  2JQT A;  2LF6 A;  2E31 A;  1XU5 E;  2MMB A;  3SPY A;  1XVB E;  3OGK B;  5IZ7 A;  3RMA A;  1XVE E;  3TAE A;  4M42 A;  4J2D A;  3LDS A;  4J2B A;  3LZJ A;  4FJG A;  3QEI A;  4M3Z A;  4DTN A;  1WAJ A;  4DU1 A;  4GAM C;  1IG9 A;  3V7D B;  3QEV A;  4JRP A;  4J2A A;  2OZM A;  3UO2 A;  2OVR B;  4FJ8 A;  2DTU A;  2B7M A;  3HGK E;  3NGI A;  1XMF E;  1P22 A;  2OYQ A;  1FZ4 E;  4M3U A;  2HD0 A;  4FJX A;  3C95 A;  2JH9 A;  3J2P A;  2JPN A;  2OVP B;  1FZ3 E;  4RL5 A;  1FZ7 E;  4ADO A;  4M45 A;  2RKH A;  4KI4 A;  3RMB A;  2B8I A;  3SUN A;  3SQ0 A;  4KHS A;  4FJL A;  4DTU A;  1XVC E;  2P5O A;  3C6N B;  4M3W A;  4FJM A;  2FW3 A;  1XL3 C;  3E4Y A;  4DU3 A;  3SQ2 A;  3SPZ A;  4DTO A;  3K2O A;  2P5G A;  3BVO A;  4J2E A;  4DTP A;  3L8B A;  1N1C A;  4KHQ A;  3CFP A;  3C94 A;  4KHU A;  4B08 A;  2OZS A;  4JS4 A;  3HP9 A;  1CLQ A;  5H37 A;  4AKI A;  4DTS A;  2JHA A;  3SUO A;  2YB5 A;  3S9H A;  3TJY A;  3QEX A;  3TL8 B;  1IH7 A;  3SUP A;  3C6P B;  3TAG A;  2PFT A;  1FS1 A;  4E3S A;  1FZ8 E;  4X5M A;  3LDB A;  3LZI A;  1FZI E;  3MKS B;  3WSO A;  4M3R A;  4EYW A;  4FJ7 A;  1XVG E;  3HGL A;  3SCX A;  2PFV A;  1MMO G;  2DY4 A;  2OVQ B;  4QNC A;  2VIX A;  2B1E A;  2P1P B;  3CFR A;  4DTJ A;  1JW2 A;  3NDK A;  3QEP A;  2P1N B;  1XU3 E;  4FJH A;  4KI6 A;  2RCU A;  4KHW A;  1FZ2 E;  4FVM A;  4DU4 A;  1FYZ E;  1FZ0 E;  1NEX B;  4QND A;  2LF3 A;  4FK2 A;  3QNO A; 
#chains in the Genus database with same CATH homology
 2P1Q B;  3LD8 A;  2JHP A;  4M3T A;  1FZH E;  2H4T A;  3CQ8 A;  4EP9 A;  2VJ4 A;  3HL8 A;  3OGL B;  1FZ1 E;  4DTX A;  2P1O B;  1FXX A;  3KD1 E;  4RNG A;  5IRE A;  4RG8 A;  1LDK E;  4AKH A;  4KHN A;  1MHZ G;  3TAB A;  4FJ9 A;  4X5N A;  1WAF A;  3UIQ A;  4KHY A;  4HCC A;  3SQ4 A;  3E4W A;  1XVF E;  3NCI A;  3RMD A;  3N1B A;  4FJN A;  5IBK B;  3SQ1 A;  4FK0 A;  3L1N A;  3SVI A;  3J27 A;  4AI6 A;  3OGM B;  4JS5 A;  3QEW A;  3RMC A;  4FJI A;  2JH8 A;  4JRQ A;  2P1M B;  1Q9Y A;  4ADN A;  3NE6 A;  4M3Y A;  4M41 A;  3L2O B;  4E4B A;  1FZ6 E;  3QER A;  1FZ9 E;  4EPH A;  4AKG A;  3QNN A;  2ATQ A;  4I6J B;  1XMG E;  2DEB A;  4I9Q A;  2QXF A;  3CFO A;  4FJ5 A;  3C6O B;  1FZ5 E;  1XVD E;  1MHY G;  3NAE A;  3L0M A;  3N1E A;  4I9L A;  4DTM A;  4HCB A;  2MZW B;  4FJK A;  4M3X A;  3SUQ A;  3NHG A;  4DTR A;  3SNN A;  2VJ5 A;  3SJJ A;  2E32 A;  1MTY G;  3QET A;  3RWU A;  3TAF A;  1Q9X A;  3KD5 E;  3QES A;  2FYO A;  4FJJ A;  1XMH E;  4FK4 A;  2JHC A;  3SI6 A;  2LF6 A;  2E31 A;  1XU5 E;  2MMB A;  3SPY A;  1XVB E;  3OGK B;  5IZ7 A;  3RMA A;  1XVE E;  3TAE A;  4M42 A;  4J2D A;  3LDS A;  4J2B A;  3LZJ A;  4FJG A;  3QEI A;  4M3Z A;  4DTN A;  1WAJ A;  4DU1 A;  4GAM C;  1IG9 A;  3V7D B;  3QEV A;  4JRP A;  4J2A A;  2OZM A;  2OVR B;  4FJ8 A;  2DTU A;  2B7M A;  3HGK E;  3NGI A;  1XMF E;  1P22 A;  2OYQ A;  1FZ4 E;  4M3U A;  2HD0 A;  4FJX A;  3C95 A;  2JH9 A;  3J2P A;  2JPN A;  2OVP B;  1FZ3 E;  4RL5 A;  1FZ7 E;  4ADO A;  4M45 A;  4KI4 A;  3RMB A;  2B8I A;  3SUN A;  3SQ0 A;  4KHS A;  4FJL A;  4DTU A;  1XVC E;  2P5O A;  3C6N B;  4M3W A;  4FJM A;  2FW3 A;  1XL3 C;  3E4Y A;  4DU3 A;  3SQ2 A;  3SPZ A;  4DTO A;  3K2O A;  2P5G A;  4J2E A;  4DTP A;  3L8B A;  4KHQ A;  3CFP A;  3C94 A;  4KHU A;  4B08 A;  2OZS A;  4JS4 A;  3HP9 A;  1CLQ A;  5H37 A;  4AKI A;  4DTS A;  2JHA A;  3SUO A;  2YB5 A;  3S9H A;  3TJY A;  3QEX A;  3TL8 B;  1IH7 A;  3SUP A;  3C6P B;  3TAG A;  2PFT A;  1FS1 A;  4E3S A;  1FZ8 E;  4X5M A;  3LDB A;  3LZI A;  1FZI E;  3MKS B;  3WSO A;  4M3R A;  4EYW A;  4FJ7 A;  1XVG E;  3HGL A;  3SCX A;  2PFV A;  1MMO G;  2DY4 A;  2OVQ B;  4QNC A;  2VIX A;  2B1E A;  2P1P B;  3CFR A;  4DTJ A;  3NDK A;  3QEP A;  2P1N B;  1XU3 E;  4FJH A;  4KI6 A;  2RCU A;  4KHW A;  1FZ2 E;  4FVM A;  4DU4 A;  1FYZ E;  1FZ0 E;  1NEX B;  4QND A;  2LF3 A;  4FK2 A;  3QNO A; 
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