1J3MA

Crystal structure of the conserved hypothetical protein tt1751 from thermus thermophilus hb8
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
127
structure length
127
Chain Sequence
GMRKTLKATLAEARAQVEAALKEEGFGILTEIDVAATLKAKLGLEKPPYLILGACNPNLAARALEALPEIGLLLPCNVVLREAEEGVEVLIQDPKEMFRVLPEATQRALAPVAEEARTRLSRALSRL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords the conserved hypothetical protein TT1751
publication title Crystal structure of a conserved hypothetical protein TT1751 from Thermus thermophilus HB8
pubmed doi rcsb
source organism Thermus thermophilus
total genus 42
structure length 127
sequence length 127
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-02-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03625 DUF302 Domain of unknown function DUF302
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.70 Alpha Beta 2-Layer Sandwich TATA-Binding Protein TT1751-like domain 1j3mA00
1J3MA 1Q9UA
chains in the Genus database with same CATH superfamily
2Z0FA 4C7PA 2FGTA 1VOKA 2QREA 3CVSA 1WJWA 2Y8QA 1K35A 1B9KA 3D7QA 1N39A 5EPCA 4EAJA 1QN5A 2NOFA 2Z8UA 1PCZA 2XHIA 3I0XA 1QTSA 2H5AX 2JPIA 4ROEB 1KYUA 2QLVA 1N3CA 1UT7A 2O3OA 4EAKA 4PY5A 5JMVD 1EBMA 2I5WA 2JOIA 2D0BA 4B0AA 3F10A 2OOXA 3I3WA 2YH5A 2NVMA 1PVSA 1LXTA 1QN8A 5HSHA 1FN7A 2DKAA 4EJYA 4ROCB 1NVPA 1EUVA 3HS9A 4WXAA 3CWUA 4EJZA 5IYCP 4DULA 2HL9A 2YA3A 2ZFDB 3ASMA 1QNEA 3KRMA 2FKMX 1TGHA 1C47A 2NOBA 1UT4A 3OSEA 1PCMX 2JHJA 4IL8A 1KY6A 3OCIA 1N3AA 5F9CA 1MP9A 1VKLA 2V8QA 1KY7A 1QTPA 1C4GA 1QNBA 1QNAA 1LWWA 3D4VA 1QN3A 1YTBA 1VTLE 3IH7A 3PDKA 2HZMA 3NA5A 1UL7A 3CWAA 1TUOA 2HKPA 4TPSA 3I0WA 1YQKA 3CW7A 1QNCA 2HL8A 1T6AA 1KO9A 4QG5A 1JDYA 2QR1A 2F7LA 4D7QA 2PWWA 5IYBP 2DKCA 1JFIC 1LWVA 2IV8A 1XSZA 2JHNA 2NOZA 1QN6A 2V92A 1C9BB 1M3HA 1J3MA 1Q9UA 1NGMA 2G30A 1E42A 1QN4A 3DPUA 4HJHA 2LAEA 4BJUA 5IYDP 1W80A 3N89A 2Y8LA 3RPJA 5AN4A 4EAGA 3HS8A 4MRQA 2HZSA 1QN7A 2QRDA 3T4NA 3OSMA 2FKFA 3H1ZA 1KYDA 1M5Q1 2NOIA 2VJ0A 2NOLA 1R4XA 3KTUA 1LWYA 2MZ8A 1CDWA 1K2YX 2EHBD 1VTOA 2QRCA 5KL0A 1P5GX 1YQRA 3SNSA 2NOHA 1MPGA 3EIKA 3PMGA 3TDHA 3OGDA 1QN9A 4Q11A 1TBAB 5BMPA 3RSMA 3CWTA 1KFQA 1KFIA 2NOEA 1P5DX 3CWSA 2D0CA 1V5SA 1NH2A 1YTFA 3F0ZA 2R5XA 4EAIA 3TE5A 1TBPA 3EAYA 1HU0A 2NLVA 1PZDA 4CFFA 2FUVA 3ENOC 3OSTA 3VN5A 3DPTA 2IV9A 4D7RA 3OH9A 2V9JA 3ULXA 1WQAA 1YQLA 1KYFA 2NWVA 4EALA 2MJ7A 4WX8A 1YQMA 1PCJX 3C04A 1M3QA 2H4LX 1VOLB 3ENCA 3OC3C 5BMNA 2D0AA 1D3UA 5JN5A 2OOYA 1DIZA 3UW2A 1AISA 3OLPA 4WZSD 3BKQX 3CVTA 2DKDA 3OH6A 1RM1A 4I8OA 4RODB
chains in the Genus database with same CATH topology
1J3MA 1Q9UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1J3M A;  1Q9U A; 
#chains in the Genus database with same CATH topology
 2Z0F A;  4C7P A;  2FGT A;  1VOK A;  2QRE A;  3CVS A;  1WJW A;  2Y8Q A;  1K35 A;  1B9K A;  3D7Q A;  1N39 A;  5EPC A;  4EAJ A;  1QN5 A;  2NOF A;  2Z8U A;  1PCZ A;  2XHI A;  3I0X A;  1QTS A;  2H5A X;  2JPI A;  4ROE B;  1KYU A;  2QLV A;  1N3C A;  1UT7 A;  2O3O A;  4EAK A;  4PY5 A;  5JMV D;  1EBM A;  2I5W A;  2JOI A;  2D0B A;  4B0A A;  3F10 A;  2OOX A;  3I3W A;  2YH5 A;  2NVM A;  1PVS A;  1LXT A;  1QN8 A;  5HSH A;  1FN7 A;  2DKA A;  4EJY A;  4ROC B;  1NVP A;  1EUV A;  3HS9 A;  4WXA A;  3CWU A;  4EJZ A;  5IYC P;  4DUL A;  2HL9 A;  2YA3 A;  2ZFD B;  3ASM A;  1QNE A;  3KRM A;  2FKM X;  1TGH A;  1C47 A;  2NOB A;  1UT4 A;  3OSE A;  1PCM X;  2JHJ A;  4IL8 A;  1KY6 A;  3OCI A;  1N3A A;  5F9C A;  1MP9 A;  1VKL A;  2V8Q A;  1KY7 A;  1QTP A;  1C4G A;  1QNB A;  1QNA A;  1LWW A;  3D4V A;  1QN3 A;  1YTB A;  1VTL E;  3IH7 A;  3PDK A;  2HZM A;  3NA5 A;  1UL7 A;  3CWA A;  1TUO A;  2HKP A;  4TPS A;  3I0W A;  1YQK A;  3CW7 A;  1QNC A;  2HL8 A;  1T6A A;  1KO9 A;  4QG5 A;  1JDY A;  2QR1 A;  2F7L A;  4D7Q A;  2PWW A;  5IYB P;  2DKC A;  1JFI C;  1LWV A;  2IV8 A;  1XSZ A;  2JHN A;  2NOZ A;  1QN6 A;  2V92 A;  1C9B B;  1M3H A;  1J3M A;  1Q9U A;  1NGM A;  2G30 A;  1E42 A;  1QN4 A;  3DPU A;  4HJH A;  2LAE A;  4BJU A;  5IYD P;  1W80 A;  3N89 A;  2Y8L A;  3RPJ A;  5AN4 A;  4EAG A;  3HS8 A;  4MRQ A;  2HZS A;  1QN7 A;  2QRD A;  3T4N A;  3OSM A;  2FKF A;  3H1Z A;  1KYD A;  1M5Q 1;  2NOI A;  2VJ0 A;  2NOL A;  1R4X A;  3KTU A;  1LWY A;  2MZ8 A;  1CDW A;  1K2Y X;  2EHB D;  1VTO A;  2QRC A;  5KL0 A;  1P5G X;  1YQR A;  3SNS A;  2NOH A;  1MPG A;  3EIK A;  3PMG A;  3TDH A;  3OGD A;  1QN9 A;  4Q11 A;  1TBA B;  5BMP A;  3RSM A;  3CWT A;  1KFQ A;  1KFI A;  2NOE A;  1P5D X;  3CWS A;  2D0C A;  1V5S A;  1NH2 A;  1YTF A;  3F0Z A;  2R5X A;  4EAI A;  3TE5 A;  1TBP A;  3EAY A;  1HU0 A;  2NLV A;  1PZD A;  4CFF A;  2FUV A;  3ENO C;  3OST A;  3VN5 A;  3DPT A;  2IV9 A;  4D7R A;  3OH9 A;  2V9J A;  3ULX A;  1WQA A;  1YQL A;  1KYF A;  2NWV A;  4EAL A;  2MJ7 A;  4WX8 A;  1YQM A;  1PCJ X;  3C04 A;  1M3Q A;  2H4L X;  1VOL B;  3ENC A;  3OC3 C;  5BMN A;  2D0A A;  1D3U A;  5JN5 A;  2OOY A;  1DIZ A;  3UW2 A;  1AIS A;  3OLP A;  4WZS D;  3BKQ X;  3CVT A;  2DKD A;  3OH6 A;  1RM1 A;  4I8O A;  4ROD B; 
#chains in the Genus database with same CATH homology
 1J3M A;  1Q9U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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