3UW2A

X-ray crystal structure of phosphoglucomutase/phosphomannomutase family protein (bth_i1489)from burkholderia thailandensis
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
464
structure length
458
Chain Sequence
MISQSIFKAYDIRGVIGKTLDADVARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGDQIQGLYKRIVDARFETGSGSYEQYDVADQYVERIVGDIKLTRPLKLVVDAGNGVAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLARWVREKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADPSALLNGLPNAVSTPELQLNVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRRALKAAKPGANLPF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Phosphoglucomutase/phosphomannomutase family protein
publication title Combining functional and structural genomics to sample the essential Burkholderia structome.
pubmed doi rcsb
source organism Burkholderia thailandensis
molecule tags Isomerase
total genus 159
structure length 458
sequence length 464
ec nomenclature
pdb deposition date 2011-11-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00408 PGM_PMM_IV Phosphoglucomutase/phosphomannomutase, C-terminal domain
A PF02878 PGM_PMM_I Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A PF02879 PGM_PMM_II Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A PF02880 PGM_PMM_III Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.50 Alpha Beta 2-Layer Sandwich TATA-Binding Protein Alpha-D-phosphohexomutase, C-terminal domain 3uw2A04
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 3uw2A03
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 3uw2A01
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 3uw2A02
1TUOA 2FKFA 5JMVD 5JN5A 2EHPA 4BJUA 1WJWA 2EIUA 5KL0A 3BKQX 1KFIA 1JDYA 1C4GA 2FKMX 3NA5A 3RSMA 1KFQA 1VKLA 3ENCA 1PCJX 4IL8A 3UW2A 1P5GX 5HSHA 4WX8A 2JPIA 2DKAA 4MRQA 2Z0FA 5EPCA 1K2YX 5BMNA 1WQAA 2H5AX 2DKDA 3PDKA 4HJHA 1K35A 4WXAA 3I3WA 2H4LX 5F9CA 2DKCA 3C04A 1P5DX 1LXTA 1PCMX 5BMPA 3PMGA 1C47A 4QG5A 2F7LA 3ENOC 3OLPA 2FUVA
chains in the Genus database with same CATH superfamily
1QN6A 2JOIA 1QN4A 1AISA 2EIUA 1WJWA 1VOLB 3CVSA 1QN5A 1KYDA 1JDYA 1C4GA 5AN4A 1QN8A 1KFQA 1QNEA 2NWVA 1NGMA 1YQRA 1E42A 2O3OA 3OGDA 3D4VA 1QNAA 4EALA 1UL7A 3KRMA 3RPJA 3CWAA 2HZMA 4EAGA 2NOIA 1K2YX 1NH2A 2H5AX 2DKDA 1EBMA 2Y8QA 1VTOA 2PWWA 1TGHA 3I3WA 1QNCA 2QLVA 2DKCA 1V5SA 3CVTA 2QREA 1PCMX 2FGTA 5BMPA 2OOYA 3PMGA 2YH5A 1N3CA 3RSMA 3IH7A 2FKFA 5JMVD 2HKPA 2IV8A 1D3UA 4EJYA 1M5Q1 2MZ8A 2R5XA 3ULXA 2MJ7A 1B9KA 2NOFA 1VKLA 1QN3A 4IL8A 5HSHA 2OOXA 1QNBA 1KY6A 5BMNA 1XSZA 1MPGA 3PDKA 1RM1A 1K35A 4WXAA 2HZSA 3CWUA 1VTLE 4B0AA 1LWVA 2NOHA 3OH6A 2QRDA 1P5DX 1UT4A 3H1ZA 1QTSA 4ROEB 2I5WA 2Z8UA 2QRCA 4EJZA 2IV9A 2D0CA 5IYDP 3N89A 3KTUA 1LWWA 2F7LA 3ASMA 3ENOC 3OLPA 4EAJA 1M3HA 4C7PA 2XHIA 1KO9A 1YTBA 2HL8A 5JN5A 2EHPA 3BKQX 1KFIA 3TDHA 3HS9A 3OSEA 2NOLA 1QN7A 4ROCB 3EAYA 3ENCA 1PCJX 3UW2A 1P5GX 4D7QA 1YQLA 4I8OA 2NLVA 4WX8A 1EUVA 3F10A 3SNSA 5EPCA 2V92A 1WQAA 4TPSA 1C47A 4HJHA 2NVMA 2Y8LA 2ZFDB 3OSTA 3VN5A 2H4LX 3F0ZA 5F9CA 2NOZA 1JFIC 3EIKA 2V9JA 3I0WA 1N39A 1YTFA 1TBPA 3D7QA 3DPUA 1UT7A 4D7RA 3TE5A 1KYFA 2VJ0A 5IYCP 3CWSA 1R4XA 1KYUA 1TUOA 1NVPA 3OCIA 3DPTA 4CFFA 3T4NA 1M3QA 1W80A 2D0AA 4BJUA 1J3MA 2YA3A 5KL0A 1Q9UA 4Q11A 1C9BB 2EHBD 2FKMX 2HL9A 3NA5A 3I0XA 1LWYA 1CDWA 1QN9A 2JHJA 1PCZA 4EAIA 2NOBA 3HS8A 3CW7A 3OC3C 4RODB 4EAKA 4DULA 1YQMA 1VOKA 4PY5A 2JPIA 1HU0A 1PVSA 1PZDA 2DKAA 2G30A 2QR1A 2Z0FA 4MRQA 2NOEA 1T6AA 2D0BA 1KY7A 2V8QA 3CWTA 1DIZA 3OSMA 1N3AA 1QTPA 5IYBP 1TBAB 3C04A 1FN7A 2LAEA 1YQKA 2JHNA 1LXTA 3OH9A 1MP9A 4QG5A 4WZSD 2FUVA
chains in the Genus database with same CATH topology
1TUOA 2FKFA 5JMVD 5JN5A 2EHPA 4BJUA 1WJWA 2EIUA 5KL0A 3BKQX 1KFIA 1JDYA 1C4GA 2FKMX 3NA5A 3RSMA 1KFQA 1VKLA 3ENCA 1PCJX 4IL8A 3UW2A 1P5GX 5HSHA 4WX8A 2JPIA 2DKAA 4MRQA 2Z0FA 5EPCA 1K2YX 5BMNA 1WQAA 2H5AX 2DKDA 3PDKA 4HJHA 1K35A 4WXAA 3I3WA 2H4LX 5F9CA 2DKCA 3C04A 1P5DX 1LXTA 1PCMX 5BMPA 3PMGA 1C47A 4QG5A 2F7LA 3ENOC 3OLPA 2FUVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TUO A;  2FKF A;  5JMV D;  5JN5 A;  2EHP A;  4BJU A;  1WJW A;  2EIU A;  5KL0 A;  3BKQ X;  1KFI A;  1JDY A;  1C4G A;  2FKM X;  3NA5 A;  3RSM A;  1KFQ A;  1VKL A;  3ENC A;  1PCJ X;  4IL8 A;  3UW2 A;  1P5G X;  5HSH A;  4WX8 A;  2JPI A;  2DKA A;  4MRQ A;  2Z0F A;  5EPC A;  1K2Y X;  5BMN A;  1WQA A;  2H5A X;  2DKD A;  3PDK A;  4HJH A;  1K35 A;  4WXA A;  3I3W A;  2H4L X;  5F9C A;  2DKC A;  3C04 A;  1P5D X;  1LXT A;  1PCM X;  5BMP A;  3PMG A;  1C47 A;  4QG5 A;  2F7L A;  3ENO C;  3OLP A;  2FUV A; 
#chains in the Genus database with same CATH topology
 1QN6 A;  2JOI A;  1QN4 A;  1AIS A;  2EIU A;  1WJW A;  1VOL B;  3CVS A;  1QN5 A;  1KYD A;  1JDY A;  1C4G A;  5AN4 A;  1QN8 A;  1KFQ A;  1QNE A;  2NWV A;  1NGM A;  1YQR A;  1E42 A;  2O3O A;  3OGD A;  3D4V A;  1QNA A;  4EAL A;  1UL7 A;  3KRM A;  3RPJ A;  3CWA A;  2HZM A;  4EAG A;  2NOI A;  1K2Y X;  1NH2 A;  2H5A X;  2DKD A;  1EBM A;  2Y8Q A;  1VTO A;  2PWW A;  1TGH A;  3I3W A;  1QNC A;  2QLV A;  2DKC A;  1V5S A;  3CVT A;  2QRE A;  1PCM X;  2FGT A;  5BMP A;  2OOY A;  3PMG A;  2YH5 A;  1N3C A;  3RSM A;  3IH7 A;  2FKF A;  5JMV D;  2HKP A;  2IV8 A;  1D3U A;  4EJY A;  1M5Q 1;  2MZ8 A;  2R5X A;  3ULX A;  2MJ7 A;  1B9K A;  2NOF A;  1VKL A;  1QN3 A;  4IL8 A;  5HSH A;  2OOX A;  1QNB A;  1KY6 A;  5BMN A;  1XSZ A;  1MPG A;  3PDK A;  1RM1 A;  1K35 A;  4WXA A;  2HZS A;  3CWU A;  1VTL E;  4B0A A;  1LWV A;  2NOH A;  3OH6 A;  2QRD A;  1P5D X;  1UT4 A;  3H1Z A;  1QTS A;  4ROE B;  2I5W A;  2Z8U A;  2QRC A;  4EJZ A;  2IV9 A;  2D0C A;  5IYD P;  3N89 A;  3KTU A;  1LWW A;  2F7L A;  3ASM A;  3ENO C;  3OLP A;  4EAJ A;  1M3H A;  4C7P A;  2XHI A;  1KO9 A;  1YTB A;  2HL8 A;  5JN5 A;  2EHP A;  3BKQ X;  1KFI A;  3TDH A;  3HS9 A;  3OSE A;  2NOL A;  1QN7 A;  4ROC B;  3EAY A;  3ENC A;  1PCJ X;  3UW2 A;  1P5G X;  4D7Q A;  1YQL A;  4I8O A;  2NLV A;  4WX8 A;  1EUV A;  3F10 A;  3SNS A;  5EPC A;  2V92 A;  1WQA A;  4TPS A;  1C47 A;  4HJH A;  2NVM A;  2Y8L A;  2ZFD B;  3OST A;  3VN5 A;  2H4L X;  3F0Z A;  5F9C A;  2NOZ A;  1JFI C;  3EIK A;  2V9J A;  3I0W A;  1N39 A;  1YTF A;  1TBP A;  3D7Q A;  3DPU A;  1UT7 A;  4D7R A;  3TE5 A;  1KYF A;  2VJ0 A;  5IYC P;  3CWS A;  1R4X A;  1KYU A;  1TUO A;  1NVP A;  3OCI A;  3DPT A;  4CFF A;  3T4N A;  1M3Q A;  1W80 A;  2D0A A;  4BJU A;  1J3M A;  2YA3 A;  5KL0 A;  1Q9U A;  4Q11 A;  1C9B B;  2EHB D;  2FKM X;  2HL9 A;  3NA5 A;  3I0X A;  1LWY A;  1CDW A;  1QN9 A;  2JHJ A;  1PCZ A;  4EAI A;  2NOB A;  3HS8 A;  3CW7 A;  3OC3 C;  4ROD B;  4EAK A;  4DUL A;  1YQM A;  1VOK A;  4PY5 A;  2JPI A;  1HU0 A;  1PVS A;  1PZD A;  2DKA A;  2G30 A;  2QR1 A;  2Z0F A;  4MRQ A;  2NOE A;  1T6A A;  2D0B A;  1KY7 A;  2V8Q A;  3CWT A;  1DIZ A;  3OSM A;  1N3A A;  1QTP A;  5IYB P;  1TBA B;  3C04 A;  1FN7 A;  2LAE A;  1YQK A;  2JHN A;  1LXT A;  3OH9 A;  1MP9 A;  4QG5 A;  4WZS D;  2FUV A; 
#chains in the Genus database with same CATH homology
 1TUO A;  2FKF A;  5JMV D;  5JN5 A;  2EHP A;  4BJU A;  1WJW A;  2EIU A;  5KL0 A;  3BKQ X;  1KFI A;  1JDY A;  1C4G A;  2FKM X;  3NA5 A;  3RSM A;  1KFQ A;  1VKL A;  3ENC A;  1PCJ X;  4IL8 A;  3UW2 A;  1P5G X;  5HSH A;  4WX8 A;  2JPI A;  2DKA A;  4MRQ A;  2Z0F A;  5EPC A;  1K2Y X;  5BMN A;  1WQA A;  2H5A X;  2DKD A;  3PDK A;  4HJH A;  1K35 A;  4WXA A;  3I3W A;  2H4L X;  5F9C A;  2DKC A;  3C04 A;  1P5D X;  1LXT A;  1PCM X;  5BMP A;  3PMG A;  1C47 A;  4QG5 A;  2F7L A;  3ENO C;  3OLP A;  2FUV A; 
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