3UW2A

X-ray crystal structure of phosphoglucomutase/phosphomannomutase family protein (bth_i1489)from burkholderia thailandensis
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
464
structure length
458
Chain Sequence
MISQSIFKAYDIRGVIGKTLDADVARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGDQIQGLYKRIVDARFETGSGSYEQYDVADQYVERIVGDIKLTRPLKLVVDAGNGVAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLARWVREKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADPSALLNGLPNAVSTPELQLNVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRRALKAAKPGANLPF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
source organism Burkholderia thailandensis
publication title Combining functional and structural genomics to sample the essential Burkholderia structome.
pubmed doi rcsb
molecule keywords Phosphoglucomutase/phosphomannomutase family protein
total genus 159
structure length 458
sequence length 464
ec nomenclature
pdb deposition date 2011-11-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00408 PGM_PMM_IV Phosphoglucomutase/phosphomannomutase, C-terminal domain
A PF02878 PGM_PMM_I Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A PF02879 PGM_PMM_II Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A PF02880 PGM_PMM_III Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.50 Alpha Beta 2-Layer Sandwich TATA-Binding Protein Alpha-D-phosphohexomutase, C-terminal domain 3uw2A04
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 3uw2A03
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 3uw2A01
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 3uw2A02
1K35A 1KFQA 2JPIA 1JDYA 4WX8A 3RSMA 5BMNA 1WQAA 4QG5A 1TUOA 2DKAA 4WXAA 5JMVD 1VKLA 3C04A 2DKCA 1KFIA 5HSHA 3NA5A 2FKMX 3UW2A 2Z0FA 2H5AX 1C47A 3BKQX 2EHPA 3I3WA 5F9CA 5KL0A 3PMGA 5EPCA 2FUVA 4BJUA 1K2YX 1LXTA 4IL8A 2DKDA 1PCJX 3ENOC 3ENCA 3OLPA 1P5DX 4MRQA 2FKFA 5BMPA 2EIUA 5JN5A 3PDKA 4HJHA 1C4GA 2F7LA 1WJWA 1PCMX 2H4LX 1P5GX
chains in the Genus database with same CATH superfamily
3H1ZA 4WX8A 2HZSA 3OH6A 1LWVA 5BMNA 2NOFA 2EHBD 2D0BA 1VKLA 1D3UA 3NA5A 1AISA 1VTOA 3I0XA 1C47A 1Q9UA 3ASMA 3BKQX 1YQMA 2VJ0A 1B9KA 3I3WA 1QN8A 4PY5A 2YA3A 1PZDA 2Y8LA 1R4XA 2QREA 4ROEB 4BJUA 1UL7A 1QTPA 4MRQA 3IH7A 3D4VA 1QN4A 4HJHA 2NLVA 1C4GA 1FN7A 2HL8A 2QRDA 3EIKA 1CDWA 1K35A 2JPIA 3SNSA 3OSMA 2G30A 2IV8A 2NOZA 3KRMA 1V5SA 1TUOA 2DKAA 2MZ8A 2NVMA 5IYBP 2HZMA 1QNCA 3I0WA 2OOYA 1KFIA 4EJZA 2IV9A 2QRCA 4EAIA 3TE5A 2V9JA 2Z0FA 3F10A 1QN5A 4D7QA 1NH2A 2H5AX 2LAEA 2MJ7A 2XHIA 1QNBA 1YTFA 5IYDP 3D7QA 1UT4A 1TBAB 2I5WA 2O3OA 4EAKA 1YQKA 2FUVA 1LXTA 1PCJX 3OSEA 1HU0A 3OLPA 3KTUA 1YTBA 2FKFA 3TDHA 4EJYA 3PDKA 4TPSA 1NGMA 2NOEA 3UW2A 2JHJA 1M3QA 1PVSA 1XSZA 1QNAA 2NOLA 1VOKA 2JHNA 1KFQA 1JFIC 2R5XA 3OGDA 1LWYA 3CWTA 4QG5A 4WZSD 3CWAA 5JMVD 3C04A 1C9BB 1YQLA 3OCIA 5HSHA 3VN5A 2NOBA 3CVTA 1NVPA 2EHPA 4EAJA 3T4NA 2JOIA 2OOXA 1TBPA 2QR1A 5F9CA 2NOIA 3PMGA 3HS8A 1QNEA 4Q11A 3CW7A 1QN3A 3OH9A 1W80A 3N89A 4C7PA 1K2YX 2Y8QA 2NOHA 3ENOC 5BMPA 1PCZA 5AN4A 2D0AA 3CWUA 3ULXA 3EAYA 5JN5A 3CVSA 2EIUA 1M3HA 1VTLE 4IL8A 2H4LX 4EALA 3RPJA 1EBMA 1P5GX 1KO9A 1JDYA 3RSMA 3CWSA 1N39A 1EUVA 1WQAA 4EAGA 3OSTA 1DIZA 1VOLB 4WXAA 1QN7A 3F0ZA 1KY6A 3OC3C 4D7RA 3DPTA 2DKCA 1N3AA 1YQRA 2FKMX 2NWVA 2V8QA 5IYCP 1RM1A 1UT7A 4DULA 2QLVA 1N3CA 1KYUA 2FGTA 1TGHA 2HKPA 3DPUA 5KL0A 1MPGA 2ZFDB 4RODB 2D0CA 1J3MA 1M5Q1 2HL9A 5EPCA 4CFFA 1LWWA 1T6AA 2V92A 1QTSA 1MP9A 1QN6A 2DKDA 4B0AA 1KYDA 3ENCA 1P5DX 1E42A 1KY7A 2Z8UA 3HS9A 2F7LA 4ROCB 1WJWA 4I8OA 1QN9A 1PCMX 2YH5A 2PWWA 1KYFA
chains in the Genus database with same CATH topology
1K35A 1KFQA 2JPIA 1JDYA 4WX8A 3RSMA 5BMNA 1WQAA 4QG5A 1TUOA 2DKAA 4WXAA 5JMVD 1VKLA 3C04A 2DKCA 1KFIA 5HSHA 3NA5A 2FKMX 3UW2A 2Z0FA 2H5AX 1C47A 3BKQX 2EHPA 3I3WA 5F9CA 5KL0A 3PMGA 5EPCA 2FUVA 4BJUA 1K2YX 1LXTA 4IL8A 2DKDA 1PCJX 3ENOC 3ENCA 3OLPA 1P5DX 4MRQA 2FKFA 5BMPA 2EIUA 5JN5A 3PDKA 4HJHA 1C4GA 2F7LA 1WJWA 1PCMX 2H4LX 1P5GX
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K35 A;  1KFQ A;  2JPI A;  1JDY A;  4WX8 A;  3RSM A;  5BMN A;  1WQA A;  4QG5 A;  1TUO A;  2DKA A;  4WXA A;  5JMV D;  1VKL A;  3C04 A;  2DKC A;  1KFI A;  5HSH A;  3NA5 A;  2FKM X;  3UW2 A;  2Z0F A;  2H5A X;  1C47 A;  3BKQ X;  2EHP A;  3I3W A;  5F9C A;  5KL0 A;  3PMG A;  5EPC A;  2FUV A;  4BJU A;  1K2Y X;  1LXT A;  4IL8 A;  2DKD A;  1PCJ X;  3ENO C;  3ENC A;  3OLP A;  1P5D X;  4MRQ A;  2FKF A;  5BMP A;  2EIU A;  5JN5 A;  3PDK A;  4HJH A;  1C4G A;  2F7L A;  1WJW A;  1PCM X;  2H4L X;  1P5G X; 
#chains in the Genus database with same CATH topology
 3H1Z A;  4WX8 A;  2HZS A;  3OH6 A;  1LWV A;  5BMN A;  2NOF A;  2EHB D;  2D0B A;  1VKL A;  1D3U A;  3NA5 A;  1AIS A;  1VTO A;  3I0X A;  1C47 A;  1Q9U A;  3ASM A;  3BKQ X;  1YQM A;  2VJ0 A;  1B9K A;  3I3W A;  1QN8 A;  4PY5 A;  2YA3 A;  1PZD A;  2Y8L A;  1R4X A;  2QRE A;  4ROE B;  4BJU A;  1UL7 A;  1QTP A;  4MRQ A;  3IH7 A;  3D4V A;  1QN4 A;  4HJH A;  2NLV A;  1C4G A;  1FN7 A;  2HL8 A;  2QRD A;  3EIK A;  1CDW A;  1K35 A;  2JPI A;  3SNS A;  3OSM A;  2G30 A;  2IV8 A;  2NOZ A;  3KRM A;  1V5S A;  1TUO A;  2DKA A;  2MZ8 A;  2NVM A;  5IYB P;  2HZM A;  1QNC A;  3I0W A;  2OOY A;  1KFI A;  4EJZ A;  2IV9 A;  2QRC A;  4EAI A;  3TE5 A;  2V9J A;  2Z0F A;  3F10 A;  1QN5 A;  4D7Q A;  1NH2 A;  2H5A X;  2LAE A;  2MJ7 A;  2XHI A;  1QNB A;  1YTF A;  5IYD P;  3D7Q A;  1UT4 A;  1TBA B;  2I5W A;  2O3O A;  4EAK A;  1YQK A;  2FUV A;  1LXT A;  1PCJ X;  3OSE A;  1HU0 A;  3OLP A;  3KTU A;  1YTB A;  2FKF A;  3TDH A;  4EJY A;  3PDK A;  4TPS A;  1NGM A;  2NOE A;  3UW2 A;  2JHJ A;  1M3Q A;  1PVS A;  1XSZ A;  1QNA A;  2NOL A;  1VOK A;  2JHN A;  1KFQ A;  1JFI C;  2R5X A;  3OGD A;  1LWY A;  3CWT A;  4QG5 A;  4WZS D;  3CWA A;  5JMV D;  3C04 A;  1C9B B;  1YQL A;  3OCI A;  5HSH A;  3VN5 A;  2NOB A;  3CVT A;  1NVP A;  2EHP A;  4EAJ A;  3T4N A;  2JOI A;  2OOX A;  1TBP A;  2QR1 A;  5F9C A;  2NOI A;  3PMG A;  3HS8 A;  1QNE A;  4Q11 A;  3CW7 A;  1QN3 A;  3OH9 A;  1W80 A;  3N89 A;  4C7P A;  1K2Y X;  2Y8Q A;  2NOH A;  3ENO C;  5BMP A;  1PCZ A;  5AN4 A;  2D0A A;  3CWU A;  3ULX A;  3EAY A;  5JN5 A;  3CVS A;  2EIU A;  1M3H A;  1VTL E;  4IL8 A;  2H4L X;  4EAL A;  3RPJ A;  1EBM A;  1P5G X;  1KO9 A;  1JDY A;  3RSM A;  3CWS A;  1N39 A;  1EUV A;  1WQA A;  4EAG A;  3OST A;  1DIZ A;  1VOL B;  4WXA A;  1QN7 A;  3F0Z A;  1KY6 A;  3OC3 C;  4D7R A;  3DPT A;  2DKC A;  1N3A A;  1YQR A;  2FKM X;  2NWV A;  2V8Q A;  5IYC P;  1RM1 A;  1UT7 A;  4DUL A;  2QLV A;  1N3C A;  1KYU A;  2FGT A;  1TGH A;  2HKP A;  3DPU A;  5KL0 A;  1MPG A;  2ZFD B;  4ROD B;  2D0C A;  1J3M A;  1M5Q 1;  2HL9 A;  5EPC A;  4CFF A;  1LWW A;  1T6A A;  2V92 A;  1QTS A;  1MP9 A;  1QN6 A;  2DKD A;  4B0A A;  1KYD A;  3ENC A;  1P5D X;  1E42 A;  1KY7 A;  2Z8U A;  3HS9 A;  2F7L A;  4ROC B;  1WJW A;  4I8O A;  1QN9 A;  1PCM X;  2YH5 A;  2PWW A;  1KYF A; 
#chains in the Genus database with same CATH homology
 1K35 A;  1KFQ A;  2JPI A;  1JDY A;  4WX8 A;  3RSM A;  5BMN A;  1WQA A;  4QG5 A;  1TUO A;  2DKA A;  4WXA A;  5JMV D;  1VKL A;  3C04 A;  2DKC A;  1KFI A;  5HSH A;  3NA5 A;  2FKM X;  3UW2 A;  2Z0F A;  2H5A X;  1C47 A;  3BKQ X;  2EHP A;  3I3W A;  5F9C A;  5KL0 A;  3PMG A;  5EPC A;  2FUV A;  4BJU A;  1K2Y X;  1LXT A;  4IL8 A;  2DKD A;  1PCJ X;  3ENO C;  3ENC A;  3OLP A;  1P5D X;  4MRQ A;  2FKF A;  5BMP A;  2EIU A;  5JN5 A;  3PDK A;  4HJH A;  1C4G A;  2F7L A;  1WJW A;  1PCM X;  2H4L X;  1P5G X; 
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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