1UT7A

Structure of the conserved domain of anac, a member of the nac family of transcription factors
Total Genus 27

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
166
structure length
147
Chain Sequence
GSHMGIQLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSDDWVLCRIYKKQ
2040608010012014014012010080604020
0510152025Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TII1 (15-18)TIV3 (66-69)EMPTYS4 (93-106)AH1 (24-37)S1 (47-48)S2 (69-75)TVIII2 (44-47)S3 (88-90)S5 (109-121)TIV4 (105-108)S6 (128-139)TIV5 (124-127)3H2 (56-58)TVIa1 (123-126)3H1 (51-53)AH2 (59-62)Updating...
connected with : NaN
molecule tags Transcription regulation
source organism Arabidopsis thaliana
publication title Structure of the Conserved Domain of Anac, a Member of the Nac Family of Transcription Factors
pubmed doi rcsb
molecule keywords NO APICAL MERISTEM PROTEIN
total genus 27
structure length 147
sequence length 166
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-12-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02365 NAM No apical meristem (NAM) protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.150 Alpha Beta 2-Layer Sandwich TATA-Binding Protein TATA-Binding Protein 1ut7A01
1UT7A 3ULXA 1UT4A 4DULA
chains in the Genus database with same CATH superfamily
1MPGA 1CDWA 3PDKA 3CWSA 4RODB 1R4XA 1KY6A 1PCMX 1XSZA 5BMNA 1KYFA 3OSEA 1TBAB 1P5GX 3UW2A 2XHIA 1UT7A 2QRCA 2NOBA 3IH7A 1YQMA 1QN4A 3CW7A 4Q11A 2OOXA 2HZMA 1QNCA 2QLVA 2H4LX 3OC3C 5BMPA 4PY5A 2DKAA 3D4VA 1QTPA 3NA5A 3ULXA 2Y8QA 2NOZA 3OH6A 1VOLB 1LWWA 1D3UA 2Z8UA 3VN5A 1M3HA 1UL7A 3HS9A 1Q9UA 4ROCB 3DPTA 3DPUA 2DKDA 2HL8A 4C7PA 3SNSA 5JMVD 5IYDP 2V9JA 1PVSA 1QN9A 5AN4A 3CVTA 5HSHA 1KY7A 1QNBA 3OGDA 1E42A 2FKFA 4TPSA 2D0CA 2Z0FA 1QN3A 2FKMX 2JPIA 3RPJA 3T4NA 1TBPA 2PWWA 2G30A 2O3OA 4ROEB 4WZSD 1KFIA 3ASMA 4WXAA 1YTBA 1J3MA 1QN7A 2MJ7A 1PCZA 2HL9A 4IL8A 3KTUA 3I0WA 2YH5A 2NOLA 1LXTA 1W80A 1B9KA 1VKLA 2JOIA 2VJ0A 1KYUA 3OCIA 2MZ8A 4D7RA 5F9CA 4BJUA 4MRQA 4EAKA 1QN8A 3EAYA 4EAIA 1JFIC 3ENCA 4D7QA 2JHNA 3CWTA 3H1ZA 1N3AA 1PZDA 4DULA 1C47A 4B0AA 2F7LA 4HJHA 1JDYA 1QTSA 1V5SA 1EUVA 2LAEA 2YA3A 1N3CA 3RSMA 1TGHA 4EJZA 4EALA 4EAGA 1C9BB 2D0BA 2IV8A 5IYCP 1YQRA 5JN5A 1WQAA 3C04A 1MP9A 2QR1A 1VTOA 2NOFA 1C4GA 3F10A 1TUOA 3TDHA 1QN6A 2I5WA 1KFQA 2NLVA 2NWVA 1M5Q1 2OOYA 2IV9A 4WX8A 2H5AX 3OH9A 1LWYA 4I8OA 1RM1A 5EPCA 1N39A 1QNAA 1VOKA 3BKQX 4EAJA 2Y8LA 3HS8A 3OLPA 3CWUA 3D7QA 1NH2A 1YTFA 2FUVA 1K2YX 3N89A 3I0XA 1QN5A 1P5DX 2ZFDB 3EIKA 3KRMA 1YQLA 1M3QA 2NVMA 1QNEA 3CWAA 2QREA 2V8QA 2DKCA 1K35A 1KYDA 1T6AA 3TE5A 3F0ZA 2HZSA 4CFFA 2R5XA 5KL0A 1EBMA 2EHBD 2V92A 3CVSA 1AISA 4EJYA 3OSTA 5IYBP 1YQKA 2D0AA 3ENOC 3PMGA 1WJWA 2NOHA 2HKPA 1LWVA 1VTLE 1DIZA 1UT4A 1KO9A 3I3WA 2JHJA 3OSMA 1PCJX 2QRDA 1HU0A 1NVPA 2NOIA 1NGMA 2NOEA 4QG5A 2FGTA 1FN7A
chains in the Genus database with same CATH topology
1CDWA 4RODB 1R4XA 1KY6A 1KYFA 1TBAB 2XHIA 1UT7A 2NOBA 3IH7A 1YQMA 1QN4A 4Q11A 2HZMA 1QNCA 3OC3C 4PY5A 1QTPA 3ULXA 2NOZA 1VOLB 1LWWA 1D3UA 2Z8UA 3VN5A 1M3HA 4ROCB 3DPTA 3DPUA 3SNSA 5IYDP 1QN9A 5AN4A 1KY7A 1QNBA 1E42A 4TPSA 2FGTA 2D0CA 1QN3A 3RPJA 1TBPA 2G30A 2O3OA 4ROEB 4WZSD 3ASMA 1YTBA 1QN7A 2MJ7A 1PCZA 3I0WA 3KTUA 2NOLA 2YH5A 1W80A 1B9KA 2JOIA 2VJ0A 1KYUA 3OCIA 2MZ8A 1QN8A 1JFIC 3H1ZA 1N3AA 1PZDA 4DULA 4B0AA 1QTSA 2LAEA 1N3CA 1TGHA 4EJZA 1C9BB 2D0BA 2IV8A 5IYCP 1YQRA 1VTOA 1MP9A 2NOFA 3F10A 1QN6A 2I5WA 2IV9A 1LWYA 1QNAA 4I8OA 1RM1A 1N39A 1VOKA 3HS8A 1NH2A 1YTFA 3N89A 3I0XA 1QN5A 3EIKA 3KRMA 1YQLA 1M3QA 1QNEA 1KYDA 3F0ZA 2HZSA 1EBMA 4EJYA 1AISA 3OSTA 5IYBP 1YQKA 2D0AA 2NOHA 1LWVA 1VTLE 1UT4A 1KO9A 3OSMA 1HU0A 1NVPA 2NOIA 1NGMA 2NOEA 3HS9A 1FN7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UT7 A;  3ULX A;  1UT4 A;  4DUL A; 
#chains in the Genus database with same CATH topology
 1MPG A;  1CDW A;  3PDK A;  3CWS A;  4ROD B;  1R4X A;  1KY6 A;  1PCM X;  1XSZ A;  5BMN A;  1KYF A;  3OSE A;  1TBA B;  1P5G X;  3UW2 A;  2XHI A;  1UT7 A;  2QRC A;  2NOB A;  3IH7 A;  1YQM A;  1QN4 A;  3CW7 A;  4Q11 A;  2OOX A;  2HZM A;  1QNC A;  2QLV A;  2H4L X;  3OC3 C;  5BMP A;  4PY5 A;  2DKA A;  3D4V A;  1QTP A;  3NA5 A;  3ULX A;  2Y8Q A;  2NOZ A;  3OH6 A;  1VOL B;  1LWW A;  1D3U A;  2Z8U A;  3VN5 A;  1M3H A;  1UL7 A;  3HS9 A;  1Q9U A;  4ROC B;  3DPT A;  3DPU A;  2DKD A;  2HL8 A;  4C7P A;  3SNS A;  5JMV D;  5IYD P;  2V9J A;  1PVS A;  1QN9 A;  5AN4 A;  3CVT A;  5HSH A;  1KY7 A;  1QNB A;  3OGD A;  1E42 A;  2FKF A;  4TPS A;  2D0C A;  2Z0F A;  1QN3 A;  2FKM X;  2JPI A;  3RPJ A;  3T4N A;  1TBP A;  2PWW A;  2G30 A;  2O3O A;  4ROE B;  4WZS D;  1KFI A;  3ASM A;  4WXA A;  1YTB A;  1J3M A;  1QN7 A;  2MJ7 A;  1PCZ A;  2HL9 A;  4IL8 A;  3KTU A;  3I0W A;  2YH5 A;  2NOL A;  1LXT A;  1W80 A;  1B9K A;  1VKL A;  2JOI A;  2VJ0 A;  1KYU A;  3OCI A;  2MZ8 A;  4D7R A;  5F9C A;  4BJU A;  4MRQ A;  4EAK A;  1QN8 A;  3EAY A;  4EAI A;  1JFI C;  3ENC A;  4D7Q A;  2JHN A;  3CWT A;  3H1Z A;  1N3A A;  1PZD A;  4DUL A;  1C47 A;  4B0A A;  2F7L A;  4HJH A;  1JDY A;  1QTS A;  1V5S A;  1EUV A;  2LAE A;  2YA3 A;  1N3C A;  3RSM A;  1TGH A;  4EJZ A;  4EAL A;  4EAG A;  1C9B B;  2D0B A;  2IV8 A;  5IYC P;  1YQR A;  5JN5 A;  1WQA A;  3C04 A;  1MP9 A;  2QR1 A;  1VTO A;  2NOF A;  1C4G A;  3F10 A;  1TUO A;  3TDH A;  1QN6 A;  2I5W A;  1KFQ A;  2NLV A;  2NWV A;  1M5Q 1;  2OOY A;  2IV9 A;  4WX8 A;  2H5A X;  3OH9 A;  1LWY A;  4I8O A;  1RM1 A;  5EPC A;  1N39 A;  1QNA A;  1VOK A;  3BKQ X;  4EAJ A;  2Y8L A;  3HS8 A;  3OLP A;  3CWU A;  3D7Q A;  1NH2 A;  1YTF A;  2FUV A;  1K2Y X;  3N89 A;  3I0X A;  1QN5 A;  1P5D X;  2ZFD B;  3EIK A;  3KRM A;  1YQL A;  1M3Q A;  2NVM A;  1QNE A;  3CWA A;  2QRE A;  2V8Q A;  2DKC A;  1K35 A;  1KYD A;  1T6A A;  3TE5 A;  3F0Z A;  2HZS A;  4CFF A;  2R5X A;  5KL0 A;  1EBM A;  2EHB D;  2V92 A;  3CVS A;  1AIS A;  4EJY A;  3OST A;  5IYB P;  1YQK A;  2D0A A;  3ENO C;  3PMG A;  1WJW A;  2NOH A;  2HKP A;  1LWV A;  1VTL E;  1DIZ A;  1UT4 A;  1KO9 A;  3I3W A;  2JHJ A;  3OSM A;  1PCJ X;  2QRD A;  1HU0 A;  1NVP A;  2NOI A;  1NGM A;  2NOE A;  4QG5 A;  2FGT A;  1FN7 A; 
#chains in the Genus database with same CATH homology
 1CDW A;  4ROD B;  1R4X A;  1KY6 A;  1KYF A;  1TBA B;  2XHI A;  1UT7 A;  2NOB A;  3IH7 A;  1YQM A;  1QN4 A;  4Q11 A;  2HZM A;  1QNC A;  3OC3 C;  4PY5 A;  1QTP A;  3ULX A;  2NOZ A;  1VOL B;  1LWW A;  1D3U A;  2Z8U A;  3VN5 A;  1M3H A;  4ROC B;  3DPT A;  3DPU A;  3SNS A;  5IYD P;  1QN9 A;  5AN4 A;  1KY7 A;  1QNB A;  1E42 A;  4TPS A;  2FGT A;  2D0C A;  1QN3 A;  3RPJ A;  1TBP A;  2G30 A;  2O3O A;  4ROE B;  4WZS D;  3ASM A;  1YTB A;  1QN7 A;  2MJ7 A;  1PCZ A;  3I0W A;  3KTU A;  2NOL A;  2YH5 A;  1W80 A;  1B9K A;  2JOI A;  2VJ0 A;  1KYU A;  3OCI A;  2MZ8 A;  1QN8 A;  1JFI C;  3H1Z A;  1N3A A;  1PZD A;  4DUL A;  4B0A A;  1QTS A;  2LAE A;  1N3C A;  1TGH A;  4EJZ A;  1C9B B;  2D0B A;  2IV8 A;  5IYC P;  1YQR A;  1VTO A;  1MP9 A;  2NOF A;  3F10 A;  1QN6 A;  2I5W A;  2IV9 A;  1LWY A;  1QNA A;  4I8O A;  1RM1 A;  1N39 A;  1VOK A;  3HS8 A;  1NH2 A;  1YTF A;  3N89 A;  3I0X A;  1QN5 A;  3EIK A;  3KRM A;  1YQL A;  1M3Q A;  1QNE A;  1KYD A;  3F0Z A;  2HZS A;  1EBM A;  4EJY A;  1AIS A;  3OST A;  5IYB P;  1YQK A;  2D0A A;  2NOH A;  1LWV A;  1VTL E;  1UT4 A;  1KO9 A;  3OSM A;  1HU0 A;  1NVP A;  2NOI A;  1NGM A;  2NOE A;  3HS9 A;  1FN7 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.