4EZZ | Genus

Total Genus 69

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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	69
sequence length	218
structure length	218
Chain Sequence	VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQH

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

molecule tags	Chaperone
source organism	Escherichia coli
publication title	Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK. pubmed doi rcsb
molecule keywords	Chaperone protein DnaK
total genus	69
structure length	218
sequence length	218
ec nomenclature
pdb deposition date	2012-05-03

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.20.1270.10	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak; Chain:A; Domain 2	Substrate Binding Domain Of Dnak; Chain:A; Domain 2	4ezzA02
2.60.34.10	Mainly Beta	Sandwich	Substrate Binding Domain Of DNAk; Chain A, domain 1	Substrate Binding Domain Of DNAk; Chain A, domain 1	4ezzA01

3D2EA 4JNFA 4EZYA 2BPRA 2OP6A 4E81A 4EZSA 4EZUA 3T49A 1U00A 4JWIA 3D2FA 4WV5A 3DPQA 4WV7A 3T4AG 4JWEA 4PO2A 4F01A 3QNJA 3C7NA 4EZOA 2KHOA 4EZNA 1YUWA 1DG4A 3N8EA 7HSCA 4R5LA 4R5GA 1BPRA 1Q5LA 3DPOA 4R5KA 3T48A 2QXLA 2WINM 4EZVA 4EZWA 3C7NB 4HY9A 1CKRA 3OHXM 4EZZA 4JWCA 4FL9A 3DPPA 4H6HA 3T47A 5E84A 3DOBA 1DKYA 3T46A 1DKZA 3DQGA 4R5JA 4EZQA 4EZRA 4JNEA 4EZTA 2QFFA 4EZXA 4JWDA 4H6IA 5TKYA 4JN4A 4B9QA 4R5IA 4F00A 3H0XA 4EZPA 3L3OM 2V7YA 1DKXA 4HYBA
chains in the Genus database with same CATH superfamily

4G6QA 3T49A 3ZEFA 4AZ5A 1QWUA 1I49A 3QNJA 1DG4A 2LXYA 4AZCB 2F7PA 2WINM 4FZOA 3BVVA 1HTYA 4IWOA 3T47A 4I1QA 1GN9A 4JNEA 4E3CA 3BLBA 2YLAA 4H6IA 4B9QA 2GAFD 4EZPA 3CKDA 3DX0A 4M0MA 3I2WA 2Z0OA 3DPQA 3ER8C 2YIVX 3T4AG 5C5BB 3UITA 1MJGA 2F7OA 3C7NB 2FICA 3ER9B 3KAVA 2V0OA 2YIAA 3BVWA 3VEAA 3B51X 4EZXA 4UDYX 1TQTA 2OW7A 3EJUA 3B53X 3D4YA 2WYHA 4JNFA 1E1DA 4H8SA 2RAJA 1X03A 2YIBA 4ILIA 3I04A 3VEBA 4D8JA 2JNSA 1WDZA 3T48A 3DOBA 3KAWA 4AZIA 3L3PA 4IM0A 2Q13A 1OA1A 3D4ZA 3F7WA 4JWDA 3H0XA 3OK8A 2D4CA 2X5CA 4HYBA 2Z0VA 4ATMA 2OBMA 3ERCC 2F7RA 4FZSA 3KDRA 3DYTA 4I43A 3OHXM 4EZZA 3BUDA 1I4LA 1LQ7A 4JN4A 3DDFA 4WPEA 3DX2A 3HAHA 3ACOA 1HWWA 2MI7A 3EJRA 4EZNA 3LVTA 4R5GA 1CKRA 4EZWA 2WYIA 1Y2OA 4IM3A 4R5KA 4JWCA 1DKZA 2RT6A 2QFFA 3LMFA 4DYLA 3BVXA 5FLEX 2F1BA 3SOGA 4KIKA 3HAJA 4HR1A 4AVMA 2C08A 2YL5A 3I01A 1ZYLA 3EJTA 1W9MA 2OBLA 3BUQA 3SYVA 4EZOA 2PY6A 2KHOA 7HSCA 4AKVA 1BPRA 3DPOA 2QXLA 1X04A 1E9VA 1HXKA 3O3NB 2YL6A 3DDGA 4F00A 3GI7A 4IWPA 1E2UA 4EZUA 1U00A 2LM0A 3DX3A 4WV5A 2RAKA 2ND1A 3O3OB 4ILHB 3LLLA 3SBTB 1UPXA 3BVUA 3CV5A 1SU8A 3PLTA 5E84A 2OO2A 1TQVA 4DCNC 1URUA 3EJPA 4R5IA 2D1LA 3Q0KA 3D2EA 3HAIA 4EZYA 2OP6A 1TQWA 3Q84A 1I4TA 2YI8A 3D52A 2F7QA 3N8EA 3QE6A 3DQGA 3QWEA 2YKTA 2JNKA 4EZRA 2YL9A 3BVTA 2EX3B 2EWFA 2YLLA 4JWEA 4ILGA 4PO2A 4F01A 4KIKB 4HR1B 3QNIA 2F18A 4EZQA 2X3VA 2Z0NA 3DX1A 4FM3A 3L3OM 3A98A 4E81A 3RPMA 4JL9A 3D51A 1GNTA 1O7DB 2EFKA 2Z8YA 3CVRA 4IWQA 3BUPA 4EZSA 3CAZA 4JWIA 3D2FA 3ABHA 1YWMA 4IW0A 5KBPA 2YL8A 4AZ6A 2EFLA 1QX1A 4EZVA 4UDXX 4AZBA 3D50A 4AZGA 4NQIA 2N3KA 2V7YA 3CZSA 3EJQA 4NSWA 1O7DC 1R5EA 2NCZA 4AZCA 3RV1A 3DX4A 4IM2A 4R5LA 2GA9D 2YI9A 2F1AA 4H6HA 3BUIA 1ZWWA 3CZNA 3O3MB 3T46A 1JQKA 1OA0A 4EZTA 4BNEA 3BUBA 1PS3A 3ZEDA 1TQUA 2FYVA 5C5BA 4WV7A 4NPHA 3C7NA 1YUWA 2GF4A 3SBSA 4FZPA 4HY9A 4MQDA 1R34A 3OWGA 1DKYA 2PMRA 4AZ7A 2RAIA 1R33A 2X3XA 1QWNA 5FIGA 2QKWA 1DKXA 3FD9A 3M3WA 2OW6A 1I4DA 1OAOA 3G9GA 3QA8A 2O0I1 3EJSA 2ALWA 2OZNB 3DPPA 1GNLA 2BPRA 4WPCA 2ELBA 2ND0A 3B52X 1SU6A 2X3WA 2Q12A 1TQSA 1Q5LA 1SU7A 3I39X 4FL9A 3VKHA 4AZHA 4R5JA 1SUFA 2ZXQA 5TKYA 3RV0A 4JLCA
chains in the Genus database with same CATH topology

3D2EA 4EZYA 2OP6A 4G6QA 3T49A 3ZEFA 2NCZA 3QNJA 3RV1A 2YI8A 4IM2A 4EZNA 3N8EA 1DG4A 4R5LA 4R5GA 3DQGA 2GA9D 4EZWA 4IM3A 4R5KA 1CKRA 2WINM 2YI9A 4JWCA 4IWOA 4H6HA 3T47A 3O3MB 1DKZA 3T46A 1GN9A 2RT6A 4EZRA 4JNEA 1JQKA 1OA0A 2QFFA 3LMFA 4E3CA 4EZTA 4H6IA 4B9QA 2GAFD 5FLEX 4EZPA 2EX3B 2EWFA 4M0MA 3ZEDA 3DPQA 3ER8C 4WV7A 2YIVX 4NPHA 3T4AG 4JWEA 4ILGA 4PO2A 4KIKA 4F01A 3UITA 3C7NA 4HR1A 1YUWA 3SBSA 1MJGA 4KIKB 3C7NB 4HR1B 4HY9A 3ER9B 4MQDA 3KAVA 3OWGA 2YIAA 3VEAA 1DKYA 4EZQA 3B51X 4EZXA 4UDYX 5FIGA 4FM3A 3B53X 3I01A 1ZYLA 3L3OM 1DKXA 4JNFA 3A98A 1E1DA 1W9MA 3FD9A 4E81A 2YIBA 2OBLA 4ILIA 1OAOA 3I04A 3VEBA 4D8JA 3QA8A 4JL9A 4EZOA 2PY6A 2KHOA 2JNSA 7HSCA 1BPRA 1GNTA 3DPOA 3T48A 2QXLA 3DPPA 3DOBA 3KAWA 1E9VA 4IM0A 1OA1A 2Z8YA 1GNLA 3F7WA 3O3NB 4JWDA 4IWQA 4F00A 3GI7A 3H0XA 4IWPA 2X5CA 1E2UA 4HYBA 2BPRA 4EZSA 4EZUA 2OBMA 1U00A 2LM0A 4JWIA 3D2FA 2ND0A 4WV5A 4IW0A 3ERCC 2ND1A 3O3OB 4ILHB 3B52X 1SU6A 3KDRA 3SBTB 1Q5LA 1SU7A 4EZVA 4I43A 1UPXA 3OHXM 3I39X 4EZZA 4FL9A 4UDXX 3VKHA 1SU8A 5E84A 4R5JA 1SUFA 5TKYA 4JN4A 4R5IA 3RV0A 2N3KA 2V7YA 4JLCA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 3D2E A;  4JNF A;  4EZY A;  2BPR A;  2OP6 A;  4E81 A;  4EZS A;  4EZU A;  3T49 A;  1U00 A;  4JWI A;  3D2F A;  4WV5 A;  3DPQ A;  4WV7 A;  3T4A G;  4JWE A;  4PO2 A;  4F01 A;  3QNJ A;  3C7N A;  4EZO A;  2KHO A;  4EZN A;  1YUW A;  1DG4 A;  3N8E A;  7HSC A;  4R5L A;  4R5G A;  1BPR A;  1Q5L A;  3DPO A;  4R5K A;  3T48 A;  2QXL A;  2WIN M;  4EZV A;  4EZW A;  3C7N B;  4HY9 A;  1CKR A;  3OHX M;  4EZZ A;  4JWC A;  4FL9 A;  3DPP A;  4H6H A;  3T47 A;  5E84 A;  3DOB A;  1DKY A;  3T46 A;  1DKZ A;  3DQG A;  4R5J A;  4EZQ A;  4EZR A;  4JNE A;  4EZT A;  2QFF A;  4EZX A;  4JWD A;  4H6I A;  5TKY A;  4JN4 A;  4B9Q A;  4R5I A;  4F00 A;  3H0X A;  4EZP A;  3L3O M;  2V7Y A;  1DKX A;  4HYB A; 
#chains in the Genus database with same CATH topology
 4G6Q A;  3T49 A;  3ZEF A;  4AZ5 A;  1QWU A;  1I49 A;  3QNJ A;  1DG4 A;  2LXY A;  4AZC B;  2F7P A;  2WIN M;  4FZO A;  3BVV A;  1HTY A;  4IWO A;  3T47 A;  4I1Q A;  1GN9 A;  4JNE A;  4E3C A;  3BLB A;  2YLA A;  4H6I A;  4B9Q A;  2GAF D;  4EZP A;  3CKD A;  3DX0 A;  4M0M A;  3I2W A;  2Z0O A;  3DPQ A;  3ER8 C;  2YIV X;  3T4A G;  5C5B B;  3UIT A;  1MJG A;  2F7O A;  3C7N B;  2FIC A;  3ER9 B;  3KAV A;  2V0O A;  2YIA A;  3BVW A;  3VEA A;  3B51 X;  4EZX A;  4UDY X;  1TQT A;  2OW7 A;  3EJU A;  3B53 X;  3D4Y A;  2WYH A;  4JNF A;  1E1D A;  4H8S A;  2RAJ A;  1X03 A;  2YIB A;  4ILI A;  3I04 A;  3VEB A;  4D8J A;  2JNS A;  1WDZ A;  3T48 A;  3DOB A;  3KAW A;  4AZI A;  3L3P A;  4IM0 A;  2Q13 A;  1OA1 A;  3D4Z A;  3F7W A;  4JWD A;  3H0X A;  3OK8 A;  2D4C A;  2X5C A;  4HYB A;  2Z0V A;  4ATM A;  2OBM A;  3ERC C;  2F7R A;  4FZS A;  3KDR A;  3DYT A;  4I43 A;  3OHX M;  4EZZ A;  3BUD A;  1I4L A;  1LQ7 A;  4JN4 A;  3DDF A;  4WPE A;  3DX2 A;  3HAH A;  3ACO A;  1HWW A;  2MI7 A;  3EJR A;  4EZN A;  3LVT A;  4R5G A;  1CKR A;  4EZW A;  2WYI A;  1Y2O A;  4IM3 A;  4R5K A;  4JWC A;  1DKZ A;  2RT6 A;  2QFF A;  3LMF A;  4DYL A;  3BVX A;  5FLE X;  2F1B A;  3SOG A;  4KIK A;  3HAJ A;  4HR1 A;  4AVM A;  2C08 A;  2YL5 A;  3I01 A;  1ZYL A;  3EJT A;  1W9M A;  2OBL A;  3BUQ A;  3SYV A;  4EZO A;  2PY6 A;  2KHO A;  7HSC A;  4AKV A;  1BPR A;  3DPO A;  2QXL A;  1X04 A;  1E9V A;  1HXK A;  3O3N B;  2YL6 A;  3DDG A;  4F00 A;  3GI7 A;  4IWP A;  1E2U A;  4EZU A;  1U00 A;  2LM0 A;  3DX3 A;  4WV5 A;  2RAK A;  2ND1 A;  3O3O B;  4ILH B;  3LLL A;  3SBT B;  1UPX A;  3BVU A;  3CV5 A;  1SU8 A;  3PLT A;  5E84 A;  2OO2 A;  1TQV A;  4DCN C;  1URU A;  3EJP A;  4R5I A;  2D1L A;  3Q0K A;  3D2E A;  3HAI A;  4EZY A;  2OP6 A;  1TQW A;  3Q84 A;  1I4T A;  2YI8 A;  3D52 A;  2F7Q A;  3N8E A;  3QE6 A;  3DQG A;  3QWE A;  2YKT A;  2JNK A;  4EZR A;  2YL9 A;  3BVT A;  2EX3 B;  2EWF A;  2YLL A;  4JWE A;  4ILG A;  4PO2 A;  4F01 A;  4KIK B;  4HR1 B;  3QNI A;  2F18 A;  4EZQ A;  2X3V A;  2Z0N A;  3DX1 A;  4FM3 A;  3L3O M;  3A98 A;  4E81 A;  3RPM A;  4JL9 A;  3D51 A;  1GNT A;  1O7D B;  2EFK A;  2Z8Y A;  3CVR A;  4IWQ A;  3BUP A;  4EZS A;  3CAZ A;  4JWI A;  3D2F A;  3ABH A;  1YWM A;  4IW0 A;  5KBP A;  2YL8 A;  4AZ6 A;  2EFL A;  1QX1 A;  4EZV A;  4UDX X;  4AZB A;  3D50 A;  4AZG A;  4NQI A;  2N3K A;  2V7Y A;  3CZS A;  3EJQ A;  4NSW A;  1O7D C;  1R5E A;  2NCZ A;  4AZC A;  3RV1 A;  3DX4 A;  4IM2 A;  4R5L A;  2GA9 D;  2YI9 A;  2F1A A;  4H6H A;  3BUI A;  1ZWW A;  3CZN A;  3O3M B;  3T46 A;  1JQK A;  1OA0 A;  4EZT A;  4BNE A;  3BUB A;  1PS3 A;  3ZED A;  1TQU A;  2FYV A;  5C5B A;  4WV7 A;  4NPH A;  3C7N A;  1YUW A;  2GF4 A;  3SBS A;  4FZP A;  4HY9 A;  4MQD A;  1R34 A;  3OWG A;  1DKY A;  2PMR A;  4AZ7 A;  2RAI A;  1R33 A;  2X3X A;  1QWN A;  5FIG A;  2QKW A;  1DKX A;  3FD9 A;  3M3W A;  2OW6 A;  1I4D A;  1OAO A;  3G9G A;  3QA8 A;  2O0I 1;  3EJS A;  2ALW A;  2OZN B;  3DPP A;  1GNL A;  2BPR A;  4WPC A;  2ELB A;  2ND0 A;  3B52 X;  1SU6 A;  2X3W A;  2Q12 A;  1TQS A;  1Q5L A;  1SU7 A;  3I39 X;  4FL9 A;  3VKH A;  4AZH A;  4R5J A;  1SUF A;  2ZXQ A;  5TKY A;  3RV0 A;  4JLC A; 
#chains in the Genus database with same CATH homology
 3D2E A;  4EZY A;  2OP6 A;  4G6Q A;  3T49 A;  3ZEF A;  2NCZ A;  3QNJ A;  3RV1 A;  2YI8 A;  4IM2 A;  4EZN A;  3N8E A;  1DG4 A;  4R5L A;  4R5G A;  3DQG A;  2GA9 D;  4EZW A;  4IM3 A;  4R5K A;  1CKR A;  2WIN M;  2YI9 A;  4JWC A;  4IWO A;  4H6H A;  3T47 A;  3O3M B;  1DKZ A;  3T46 A;  1GN9 A;  2RT6 A;  4EZR A;  4JNE A;  1JQK A;  1OA0 A;  2QFF A;  3LMF A;  4E3C A;  4EZT A;  4H6I A;  4B9Q A;  2GAF D;  5FLE X;  4EZP A;  2EX3 B;  2EWF A;  4M0M A;  3ZED A;  3DPQ A;  3ER8 C;  4WV7 A;  2YIV X;  4NPH A;  3T4A G;  4JWE A;  4ILG A;  4PO2 A;  4KIK A;  4F01 A;  3UIT A;  3C7N A;  4HR1 A;  1YUW A;  3SBS A;  1MJG A;  4KIK B;  3C7N B;  4HR1 B;  4HY9 A;  3ER9 B;  4MQD A;  3KAV A;  3OWG A;  2YIA A;  3VEA A;  1DKY A;  4EZQ A;  3B51 X;  4EZX A;  4UDY X;  5FIG A;  4FM3 A;  3B53 X;  3I01 A;  1ZYL A;  3L3O M;  1DKX A;  4JNF A;  3A98 A;  1E1D A;  1W9M A;  3FD9 A;  4E81 A;  2YIB A;  2OBL A;  4ILI A;  1OAO A;  3I04 A;  3VEB A;  4D8J A;  3QA8 A;  4JL9 A;  4EZO A;  2PY6 A;  2KHO A;  2JNS A;  7HSC A;  1BPR A;  1GNT A;  3DPO A;  3T48 A;  2QXL A;  3DPP A;  3DOB A;  3KAW A;  1E9V A;  4IM0 A;  1OA1 A;  2Z8Y A;  1GNL A;  3F7W A;  3O3N B;  4JWD A;  4IWQ A;  4F00 A;  3GI7 A;  3H0X A;  4IWP A;  2X5C A;  1E2U A;  4HYB A;  2BPR A;  4EZS A;  4EZU A;  2OBM A;  1U00 A;  2LM0 A;  4JWI A;  3D2F A;  2ND0 A;  4WV5 A;  4IW0 A;  3ERC C;  2ND1 A;  3O3O B;  4ILH B;  3B52 X;  1SU6 A;  3KDR A;  3SBT B;  1Q5L A;  1SU7 A;  4EZV A;  4I43 A;  1UPX A;  3OHX M;  3I39 X;  4EZZ A;  4FL9 A;  4UDX X;  3VKH A;  1SU8 A;  5E84 A;  4R5J A;  1SUF A;  5TKY A;  4JN4 A;  4R5I A;  3RV0 A;  2N3K A;  2V7Y A;  4JLC A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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4EZZA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization