1BRZA

Solution structure of the sweet protein brazzein, nmr, 43 structures
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
54
structure length
54
Chain Sequence
EDKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sweet protein
molecule keywords BRAZZEIN
publication title Solution structure of the thermostable sweet-tasting protein brazzein.
pubmed doi rcsb
total genus 7
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 1998-03-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1brzA00
1NRAA 2E3FA 1BMRA 1ICAA 1I2VA 2B68A 2SN3A 1CHZA 4KYPA 1PX9A 2LJMA 2N2QA 1SNBA 1ZUTA 2N69A 3E7RL 2KBKA 1VNBA 1MYNA 2LJ7A 1ZU3A 2LI7A 2NY9X 1JKZA 2GL1A 1PTXA 1T7AA 1PE4A 1T1TA 2KSKA 1DJTA 5CY0A 1LQQA 1SEGA 2KBHA 1GPTA 1T0ZA 4V1DC 3PSMA 1AYJA 4AEIA 1WWNA 2YBRC 1OMYA 1JZBA 1N4NA 4HHFA 1LQHA 4AB0A 5KK4A 2KJAA 2NY8X 1JXCA 4CQKA 1GPSA 1ZYWA 2MZ0A 1B3CA 2A7TA 1ZVGA 2LY5A 1P00A 1NPIA 1P0AA 1AHOA 1T7BA 2B3CA 2I61A 2BRZA 1SN1A 1DQ7A 3E7UX 1I6FA 4UJ0A 2YEOA 2ASCA 1SN4A 2M8BB 2YC1C 1MR4A 1CN2A 1B7DA 1OZZA 2N2RA 1WMTA 1BCGA 1ZYVA 1ZFUA 2E3GA 1FH3A 1KV0A 2KGQA 1I6GA 2KBJA 1C55A 4AAZA 1WT7A 2KPYA 1NRBA 1JZAA 1I2UA 1NH5A 2LKBA 1ZVEA 2KYQA 1C56A 1T7EA 2LR3A 2ATBA 1BRZA 1LQIA 4HE7A 2LY6A 1BK8A 1NE5A 2E0HA 2LT8A 2N66A 1TI5A 1L4VA 1VNAA
chains in the Genus database with same CATH superfamily
1NRAA 2E3FA 1BMRA 3LDLA 5AQLA 3QFUA 1I2VA 1ICAA 2B68A 2SN3A 4H5VA 1CHZA 3AY9A 3FZHA 4KYPA 4KBOA 1PX9A 2LJMA 3KOZA 2N2QA 1SNBA 1ZUTA 1YUWA 2MN5A 2N69A 5AQMA 3IUCA 3ATVA 5AQKA 5FPNA 3E7RL 1BA0A 2KBKA 3FE1A 1VNBA 2E2FA 1MYNA 1HJOA 2LJ7A 5BN9A 3KC6A 1QQNA 3R2VA 1ZU3A 2LI7A 2NY9X 5EX5A 1KAYA 3FZFA 5BPMA 1JKZA 2GMOA 2GL1A 2E8AA 1PTXA 3L4IA 1T7AA 1PE4A 1T1TA 1NGCA 2KSKA 1DJTA 3A8YA 4HWIA 5AQUA 3D2FB 5CY0A 1DKGD 5BPNA 1LQQA 1SEGA 2KBHA 3ATUA 5AQFA 1T0ZA 4V1DC 3PSMA 5AQHA 4AEIA 1AYJA 1GPTA 1ATRA 3KP0A 1WWNA 3D2EA 1POIA 2MBKA 2YBRC 2LN8A 5AQZA 1OMYA 2QWNA 3KOYA 1JZBA 3I33A 2QW9A 4UAEF 1N4NA 4HHFA 1LQHA 4AB0A 3D2FA 5AQWA 5KK4A 2KJAA 2QXLA 2NY8X 1JXCA 4CQKA 1K8BA 1GPSA 5F1XA 1ZYWA 4H5TA 5AQIA 3HSCA 4FL9A 2MZ0A 1B3CA 3KOWA 5AR0A 2QWOA 2A7TA 1ZVGA 3QMLA 2VY6A 2JDQD 3LDNA 3LDQA 1NGIA 5AQGA 3QI7A 5AQTA 2QWQA 1NGFA 1QQMA 1HX1A 4FSVA 2QWMA 1NGAA 2LY5A 3GL1A 1P00A 1NPIA 1P0AA 1AHOA 1T7BA 1QQOA 2B3CA 3KP1A 2I61A 5AQYA 1NGJA 3KVGA 3L56A 1KAZA 2KHOA 2BRZA 1SN1A 5AQVA 3SF4D 2BUPA 1DQ7A 3E7UX 1I6FA 3GKUA 4UJ0A 2E88A 2YEOA 2QWPA 2ASCA 1SN4A 3GDQA 3LDPA 3C7NB 1NGGA 5AQJA 2M8BB 2YC1C 2QWRA 5FPEA 3KOXA 2D56A 1MR4A 1CN2A 1B7DA 1OZZA 2N2RA 1WMTA 1BCGA 5EXWA 4IO8A 5EVZA 5AQOA 5F0XA 1ZYVA 1ZFUA 4UAFE 2E3GA 1FH3A 5AQXA 1BUPA 1KV0A 3JXUA 4UADE 1XRSB 2KGQA 3FZMA 1I6GA 2KBJA 1S3XA 5AQQA 5AQRA 1C55A 2YIOA 4AAZA 1KAXA 1WT7A 2KPYA 3KHWA 5AQPA 1NRBA 1NGHA 3L6QA 1JZAA 1I2UA 1NH5A 2LKBA 1ZVEA 2YIPA 3CW4A 3QFPA 3M3ZA 3FZKA 5FPMA 2KYQA 1NGDA 4H5WA 5BPLA 3FZLA 1NGBA 3D2EB 1NGEA 1C56A 2V7ZA 1T7EA 3BK3C 1BA1A 2LR3A 5F2RA 2ATBA 4GNIA 1BRZA 2YILA 4H5NA 1LQIA 4HE7A 5BN8A 4H5RA 5AQNA 5FPDA 2K35A 2LY6A 2QWLA 5AQSA 3CQXA 3LDOA 1BK8A 2N66A 1UGLA 1HPMA 1ATSA 3C7NA 1NE5A 2E0HA 2LT8A 2G2KA 5EY4A 1TI5A 1L4VA 1VNAA
chains in the Genus database with same CATH topology
1NRAA 2E3FA 1BMRA 1ICAA 1I2VA 2B68A 2SN3A 1CHZA 4KYPA 1PX9A 2LJMA 2N2QA 1SNBA 1ZUTA 2N69A 3E7RL 2KBKA 1VNBA 1MYNA 2LJ7A 1ZU3A 2LI7A 2NY9X 1JKZA 2GL1A 1PTXA 1T7AA 1PE4A 1T1TA 2KSKA 1DJTA 5CY0A 1LQQA 1SEGA 2KBHA 1GPTA 1T0ZA 4V1DC 3PSMA 1AYJA 4AEIA 1WWNA 2YBRC 1OMYA 1JZBA 1N4NA 4HHFA 1LQHA 4AB0A 5KK4A 2KJAA 2NY8X 1JXCA 4CQKA 1GPSA 1ZYWA 2MZ0A 1B3CA 2A7TA 1ZVGA 2LY5A 1P00A 1NPIA 1P0AA 1AHOA 1T7BA 2B3CA 2I61A 2BRZA 1SN1A 1DQ7A 3E7UX 1I6FA 4UJ0A 2YEOA 2ASCA 1SN4A 2M8BB 2YC1C 1MR4A 1CN2A 1B7DA 1OZZA 2N2RA 1WMTA 1BCGA 1ZYVA 1ZFUA 2E3GA 1FH3A 1KV0A 2KGQA 1I6GA 2KBJA 1C55A 4AAZA 1WT7A 2KPYA 1NRBA 1JZAA 1I2UA 1NH5A 2LKBA 1ZVEA 2KYQA 1C56A 1T7EA 2LR3A 2ATBA 1BRZA 1LQIA 4HE7A 2LY6A 1BK8A 1NE5A 2E0HA 2LT8A 2N66A 1TI5A 1L4VA 1VNAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NRA A;  2E3F A;  1BMR A;  1ICA A;  1I2V A;  2B68 A;  2SN3 A;  1CHZ A;  4KYP A;  1PX9 A;  2LJM A;  2N2Q A;  1SNB A;  1ZUT A;  2N69 A;  3E7R L;  2KBK A;  1VNB A;  1MYN A;  2LJ7 A;  1ZU3 A;  2LI7 A;  2NY9 X;  1JKZ A;  2GL1 A;  1PTX A;  1T7A A;  1PE4 A;  1T1T A;  2KSK A;  1DJT A;  5CY0 A;  1LQQ A;  1SEG A;  2KBH A;  1GPT A;  1T0Z A;  4V1D C;  3PSM A;  1AYJ A;  4AEI A;  1WWN A;  2YBR C;  1OMY A;  1JZB A;  1N4N A;  4HHF A;  1LQH A;  4AB0 A;  5KK4 A;  2KJA A;  2NY8 X;  1JXC A;  4CQK A;  1GPS A;  1ZYW A;  2MZ0 A;  1B3C A;  2A7T A;  1ZVG A;  2LY5 A;  1P00 A;  1NPI A;  1P0A A;  1AHO A;  1T7B A;  2B3C A;  2I61 A;  2BRZ A;  1SN1 A;  1DQ7 A;  3E7U X;  1I6F A;  4UJ0 A;  2YEO A;  2ASC A;  1SN4 A;  2M8B B;  2YC1 C;  1MR4 A;  1CN2 A;  1B7D A;  1OZZ A;  2N2R A;  1WMT A;  1BCG A;  1ZYV A;  1ZFU A;  2E3G A;  1FH3 A;  1KV0 A;  2KGQ A;  1I6G A;  2KBJ A;  1C55 A;  4AAZ A;  1WT7 A;  2KPY A;  1NRB A;  1JZA A;  1I2U A;  1NH5 A;  2LKB A;  1ZVE A;  2KYQ A;  1C56 A;  1T7E A;  2LR3 A;  2ATB A;  1BRZ A;  1LQI A;  4HE7 A;  2LY6 A;  1BK8 A;  1NE5 A;  2E0H A;  2LT8 A;  2N66 A;  1TI5 A;  1L4V A;  1VNA A; 
#chains in the Genus database with same CATH topology
 1NRA A;  2E3F A;  1BMR A;  3LDL A;  5AQL A;  3QFU A;  1I2V A;  1ICA A;  2B68 A;  2SN3 A;  4H5V A;  1CHZ A;  3AY9 A;  3FZH A;  4KYP A;  4KBO A;  1PX9 A;  2LJM A;  3KOZ A;  2N2Q A;  1SNB A;  1ZUT A;  1YUW A;  2MN5 A;  2N69 A;  5AQM A;  3IUC A;  3ATV A;  5AQK A;  5FPN A;  3E7R L;  1BA0 A;  2KBK A;  3FE1 A;  1VNB A;  2E2F A;  1MYN A;  1HJO A;  2LJ7 A;  5BN9 A;  3KC6 A;  1QQN A;  3R2V A;  1ZU3 A;  2LI7 A;  2NY9 X;  5EX5 A;  1KAY A;  3FZF A;  5BPM A;  1JKZ A;  2GMO A;  2GL1 A;  2E8A A;  1PTX A;  3L4I A;  1T7A A;  1PE4 A;  1T1T A;  1NGC A;  2KSK A;  1DJT A;  3A8Y A;  4HWI A;  5AQU A;  3D2F B;  5CY0 A;  1DKG D;  5BPN A;  1LQQ A;  1SEG A;  2KBH A;  3ATU A;  5AQF A;  1T0Z A;  4V1D C;  3PSM A;  5AQH A;  4AEI A;  1AYJ A;  1GPT A;  1ATR A;  3KP0 A;  1WWN A;  3D2E A;  1POI A;  2MBK A;  2YBR C;  2LN8 A;  5AQZ A;  1OMY A;  2QWN A;  3KOY A;  1JZB A;  3I33 A;  2QW9 A;  4UAE F;  1N4N A;  4HHF A;  1LQH A;  4AB0 A;  3D2F A;  5AQW A;  5KK4 A;  2KJA A;  2QXL A;  2NY8 X;  1JXC A;  4CQK A;  1K8B A;  1GPS A;  5F1X A;  1ZYW A;  4H5T A;  5AQI A;  3HSC A;  4FL9 A;  2MZ0 A;  1B3C A;  3KOW A;  5AR0 A;  2QWO A;  2A7T A;  1ZVG A;  3QML A;  2VY6 A;  2JDQ D;  3LDN A;  3LDQ A;  1NGI A;  5AQG A;  3QI7 A;  5AQT A;  2QWQ A;  1NGF A;  1QQM A;  1HX1 A;  4FSV A;  2QWM A;  1NGA A;  2LY5 A;  3GL1 A;  1P00 A;  1NPI A;  1P0A A;  1AHO A;  1T7B A;  1QQO A;  2B3C A;  3KP1 A;  2I61 A;  5AQY A;  1NGJ A;  3KVG A;  3L56 A;  1KAZ A;  2KHO A;  2BRZ A;  1SN1 A;  5AQV A;  3SF4 D;  2BUP A;  1DQ7 A;  3E7U X;  1I6F A;  3GKU A;  4UJ0 A;  2E88 A;  2YEO A;  2QWP A;  2ASC A;  1SN4 A;  3GDQ A;  3LDP A;  3C7N B;  1NGG A;  5AQJ A;  2M8B B;  2YC1 C;  2QWR A;  5FPE A;  3KOX A;  2D56 A;  1MR4 A;  1CN2 A;  1B7D A;  1OZZ A;  2N2R A;  1WMT A;  1BCG A;  5EXW A;  4IO8 A;  5EVZ A;  5AQO A;  5F0X A;  1ZYV A;  1ZFU A;  4UAF E;  2E3G A;  1FH3 A;  5AQX A;  1BUP A;  1KV0 A;  3JXU A;  4UAD E;  1XRS B;  2KGQ A;  3FZM A;  1I6G A;  2KBJ A;  1S3X A;  5AQQ A;  5AQR A;  1C55 A;  2YIO A;  4AAZ A;  1KAX A;  1WT7 A;  2KPY A;  3KHW A;  5AQP A;  1NRB A;  1NGH A;  3L6Q A;  1JZA A;  1I2U A;  1NH5 A;  2LKB A;  1ZVE A;  2YIP A;  3CW4 A;  3QFP A;  3M3Z A;  3FZK A;  5FPM A;  2KYQ A;  1NGD A;  4H5W A;  5BPL A;  3FZL A;  1NGB A;  3D2E B;  1NGE A;  1C56 A;  2V7Z A;  1T7E A;  3BK3 C;  1BA1 A;  2LR3 A;  5F2R A;  2ATB A;  4GNI A;  1BRZ A;  2YIL A;  4H5N A;  1LQI A;  4HE7 A;  5BN8 A;  4H5R A;  5AQN A;  5FPD A;  2K35 A;  2LY6 A;  2QWL A;  5AQS A;  3CQX A;  3LDO A;  1BK8 A;  2N66 A;  1UGL A;  1HPM A;  1ATS A;  3C7N A;  1NE5 A;  2E0H A;  2LT8 A;  2G2K A;  5EY4 A;  1TI5 A;  1L4V A;  1VNA A; 
#chains in the Genus database with same CATH homology
 1NRA A;  2E3F A;  1BMR A;  1ICA A;  1I2V A;  2B68 A;  2SN3 A;  1CHZ A;  4KYP A;  1PX9 A;  2LJM A;  2N2Q A;  1SNB A;  1ZUT A;  2N69 A;  3E7R L;  2KBK A;  1VNB A;  1MYN A;  2LJ7 A;  1ZU3 A;  2LI7 A;  2NY9 X;  1JKZ A;  2GL1 A;  1PTX A;  1T7A A;  1PE4 A;  1T1T A;  2KSK A;  1DJT A;  5CY0 A;  1LQQ A;  1SEG A;  2KBH A;  1GPT A;  1T0Z A;  4V1D C;  3PSM A;  1AYJ A;  4AEI A;  1WWN A;  2YBR C;  1OMY A;  1JZB A;  1N4N A;  4HHF A;  1LQH A;  4AB0 A;  5KK4 A;  2KJA A;  2NY8 X;  1JXC A;  4CQK A;  1GPS A;  1ZYW A;  2MZ0 A;  1B3C A;  2A7T A;  1ZVG A;  2LY5 A;  1P00 A;  1NPI A;  1P0A A;  1AHO A;  1T7B A;  2B3C A;  2I61 A;  2BRZ A;  1SN1 A;  1DQ7 A;  3E7U X;  1I6F A;  4UJ0 A;  2YEO A;  2ASC A;  1SN4 A;  2M8B B;  2YC1 C;  1MR4 A;  1CN2 A;  1B7D A;  1OZZ A;  2N2R A;  1WMT A;  1BCG A;  1ZYV A;  1ZFU A;  2E3G A;  1FH3 A;  1KV0 A;  2KGQ A;  1I6G A;  2KBJ A;  1C55 A;  4AAZ A;  1WT7 A;  2KPY A;  1NRB A;  1JZA A;  1I2U A;  1NH5 A;  2LKB A;  1ZVE A;  2KYQ A;  1C56 A;  1T7E A;  2LR3 A;  2ATB A;  1BRZ A;  1LQI A;  4HE7 A;  2LY6 A;  1BK8 A;  1NE5 A;  2E0H A;  2LT8 A;  2N66 A;  1TI5 A;  1L4V A;  1VNA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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