2BRZA

Solution nmr structure of the sweet protein brazzein, minimized average structure
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
54
structure length
54
Chain Sequence
EDKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sweet protein
molecule keywords BRAZZEIN
publication title Solution structure of the thermostable sweet-tasting protein brazzein.
pubmed doi rcsb
total genus 7
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 1998-04-30
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2brzA00
1SEGA 1ZVGA 2E3FA 1JXCA 1BCGA 2LT8A 1BMRA 4AEIA 1B3CA 1T7AA 2LY5A 2KSKA 1NRAA 2B68A 2B3CA 2GL1A 1SN4A 2SN3A 3PSMA 1WMTA 2YBRC 2KYQA 2I61A 1WWNA 2YEOA 1T7BA 1KV0A 1NPIA 4V1DC 2KGQA 2KJAA 1ICAA 1DJTA 1T1TA 1I2VA 2YC1C 1CN2A 1WT7A 1I6GA 1I2UA 1ZVEA 2KBKA 2N69A 1GPSA 2KPYA 2MZ0A 1CHZA 1P0AA 1I6FA 1MYNA 1N4NA 2ASCA 1MR4A 1VNBA 2ATBA 1ZFUA 5KK4A 1NE5A 4AAZA 2LJMA 3E7RL 1ZYWA 1PE4A 2N66A 1PTXA 1LQQA 1AHOA 1L4VA 2KBHA 1BK8A 1FH3A 1LQIA 1NRBA 1AYJA 4CQKA 2E3GA 1B7DA 1DQ7A 2LR3A 1LQHA 3E7UX 1T0ZA 1ZUTA 1OMYA 1PX9A 2N2RA 2M8BB 2KBJA 1JKZA 1VNAA 2E0HA 2LJ7A 4AB0A 1JZBA 4HHFA 2LY6A 1JZAA 2BRZA 2NY9X 2N2QA 1GPTA 1ZU3A 2A7TA 1OZZA 4KYPA 1ZYVA 1SNBA 1P00A 2LI7A 1C56A 5CY0A 4UJ0A 2NY8X 4HE7A 1SN1A 2LKBA 1C55A 1TI5A 1NH5A 1T7EA 1BRZA
chains in the Genus database with same CATH superfamily
1SEGA 1XRSB 1ZVGA 2E3FA 1NGCA 3L6QA 2GMOA 1JXCA 5AQGA 2QWLA 1BCGA 2LT8A 1BMRA 4AEIA 3QI7A 2G2KA 2BUPA 1B3CA 3ATVA 1T7AA 2E2FA 2LY5A 5BN8A 1UGLA 3KOYA 2KSKA 1NRAA 2QWQA 5AR0A 2B68A 1S3XA 2B3CA 5AQXA 1NGFA 1SN4A 2GL1A 2SN3A 3PSMA 1NGDA 3KOZA 1WMTA 2YBRC 2KYQA 2I61A 1WWNA 4GNIA 5AQRA 5AQKA 5AQOA 4FSVA 4H5VA 5F2RA 2YEOA 1T7BA 3SF4D 1QQMA 5AQNA 1KV0A 3LDOA 1NPIA 4V1DC 2KGQA 1DKGD 2KJAA 5BPNA 5AQHA 1ICAA 1DJTA 1T1TA 3CQXA 2YC1C 1I2VA 5AQWA 1CN2A 1WT7A 1I6GA 1I2UA 3QFUA 5AQUA 3KOWA 1ZVEA 4KBOA 2KBKA 4H5WA 3D2FB 2N69A 1GPSA 2KPYA 3GDQA 3C7NA 3L4IA 1YUWA 2MZ0A 1CHZA 1P0AA 1I6FA 1MYNA 1N4NA 5EVZA 2ASCA 1MR4A 4UADE 5AQIA 3KC6A 1BUPA 1VNBA 2ATBA 1ZFUA 5KK4A 3FZLA 3D2EA 3KOXA 1NE5A 1NGBA 4AAZA 2YIOA 2LJMA 3FZHA 3AY9A 3IUCA 3GKUA 5FPDA 2K35A 1NGGA 3E7RL 1ZYWA 1PE4A 2N66A 1PTXA 3L56A 1LQQA 1AHOA 1KAXA 3CW4A 1NGAA 3M3ZA 1HX1A 5AQPA 5EXWA 4FL9A 3FZMA 2KBHA 1QQNA 3LDPA 3QMLA 5AQJA 1L4VA 1ATSA 5BN9A 3LDLA 1NGJA 2QW9A 3R2VA 1BK8A 1K8BA 1POIA 2LN8A 2MBKA 1FH3A 1LQIA 1NRBA 1AYJA 4UAEF 5AQYA 2QWOA 1NGHA 4CQKA 2E88A 3A8YA 2E3GA 5AQFA 1B7DA 1ATRA 3D2EB 1DQ7A 1KAZA 2LR3A 3FE1A 5AQVA 5FPNA 5BPMA 1LQHA 5FPEA 3E7UX 1T0ZA 1ZUTA 1OMYA 1PX9A 2N2RA 3FZKA 3I33A 2VY6A 3KHWA 3QFPA 2M8BB 4UAFE 2KBJA 2QXLA 1VNAA 2E0HA 2JDQD 3KVGA 5AQTA 2V7ZA 1JKZA 1KAYA 1BA0A 3ATUA 4H5RA 1BA1A 5AQMA 2LJ7A 4AB0A 3FZFA 3KP1A 1JZBA 4HHFA 3LDQA 5F0XA 2E8AA 2LY6A 1JZAA 2BRZA 2NY9X 2N2QA 2QWNA 4IO8A 5AQSA 1GPTA 2MN5A 3D2FA 5F1XA 1QQOA 3KP0A 5FPMA 1ZU3A 3C7NB 2QWMA 5AQLA 2A7TA 4H5TA 4H5NA 1OZZA 3LDNA 1HPMA 4KYPA 1ZYVA 1SNBA 3HSCA 2D56A 4HWIA 5AQZA 2YILA 1P00A 5AQQA 2LI7A 1C56A 5CY0A 4UJ0A 3JXUA 2NY8X 5BPLA 4HE7A 2YIPA 3GL1A 1SN1A 2LKBA 1C55A 3BK3C 2QWPA 1NGEA 1TI5A 1NH5A 1NGIA 2KHOA 2QWRA 5EY4A 5EX5A 1HJOA 1T7EA 1BRZA
chains in the Genus database with same CATH topology
1SEGA 1ZVGA 2E3FA 1JXCA 1BCGA 2LT8A 1BMRA 4AEIA 1B3CA 1T7AA 2LY5A 2KSKA 1NRAA 2B68A 2B3CA 2GL1A 1SN4A 2SN3A 3PSMA 1WMTA 2YBRC 2KYQA 2I61A 1WWNA 2YEOA 1T7BA 1KV0A 1NPIA 4V1DC 2KGQA 2KJAA 1ICAA 1DJTA 1T1TA 1I2VA 2YC1C 1CN2A 1WT7A 1I6GA 1I2UA 1ZVEA 2KBKA 2N69A 1GPSA 2KPYA 2MZ0A 1CHZA 1P0AA 1I6FA 1MYNA 1N4NA 2ASCA 1MR4A 1VNBA 2ATBA 1ZFUA 5KK4A 1NE5A 4AAZA 2LJMA 3E7RL 1ZYWA 1PE4A 2N66A 1PTXA 1LQQA 1AHOA 1L4VA 2KBHA 1BK8A 1FH3A 1LQIA 1NRBA 1AYJA 4CQKA 2E3GA 1B7DA 1DQ7A 2LR3A 1LQHA 3E7UX 1T0ZA 1ZUTA 1OMYA 1PX9A 2N2RA 2M8BB 2KBJA 1JKZA 1VNAA 2E0HA 2LJ7A 4AB0A 1JZBA 4HHFA 2LY6A 1JZAA 2BRZA 2NY9X 2N2QA 1GPTA 1ZU3A 2A7TA 1OZZA 4KYPA 1ZYVA 1SNBA 1P00A 2LI7A 1C56A 5CY0A 4UJ0A 2NY8X 4HE7A 1SN1A 2LKBA 1C55A 1TI5A 1NH5A 1T7EA 1BRZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SEG A;  1ZVG A;  2E3F A;  1JXC A;  1BCG A;  2LT8 A;  1BMR A;  4AEI A;  1B3C A;  1T7A A;  2LY5 A;  2KSK A;  1NRA A;  2B68 A;  2B3C A;  2GL1 A;  1SN4 A;  2SN3 A;  3PSM A;  1WMT A;  2YBR C;  2KYQ A;  2I61 A;  1WWN A;  2YEO A;  1T7B A;  1KV0 A;  1NPI A;  4V1D C;  2KGQ A;  2KJA A;  1ICA A;  1DJT A;  1T1T A;  1I2V A;  2YC1 C;  1CN2 A;  1WT7 A;  1I6G A;  1I2U A;  1ZVE A;  2KBK A;  2N69 A;  1GPS A;  2KPY A;  2MZ0 A;  1CHZ A;  1P0A A;  1I6F A;  1MYN A;  1N4N A;  2ASC A;  1MR4 A;  1VNB A;  2ATB A;  1ZFU A;  5KK4 A;  1NE5 A;  4AAZ A;  2LJM A;  3E7R L;  1ZYW A;  1PE4 A;  2N66 A;  1PTX A;  1LQQ A;  1AHO A;  1L4V A;  2KBH A;  1BK8 A;  1FH3 A;  1LQI A;  1NRB A;  1AYJ A;  4CQK A;  2E3G A;  1B7D A;  1DQ7 A;  2LR3 A;  1LQH A;  3E7U X;  1T0Z A;  1ZUT A;  1OMY A;  1PX9 A;  2N2R A;  2M8B B;  2KBJ A;  1JKZ A;  1VNA A;  2E0H A;  2LJ7 A;  4AB0 A;  1JZB A;  4HHF A;  2LY6 A;  1JZA A;  2BRZ A;  2NY9 X;  2N2Q A;  1GPT A;  1ZU3 A;  2A7T A;  1OZZ A;  4KYP A;  1ZYV A;  1SNB A;  1P00 A;  2LI7 A;  1C56 A;  5CY0 A;  4UJ0 A;  2NY8 X;  4HE7 A;  1SN1 A;  2LKB A;  1C55 A;  1TI5 A;  1NH5 A;  1T7E A;  1BRZ A; 
#chains in the Genus database with same CATH topology
 1SEG A;  1XRS B;  1ZVG A;  2E3F A;  1NGC A;  3L6Q A;  2GMO A;  1JXC A;  5AQG A;  2QWL A;  1BCG A;  2LT8 A;  1BMR A;  4AEI A;  3QI7 A;  2G2K A;  2BUP A;  1B3C A;  3ATV A;  1T7A A;  2E2F A;  2LY5 A;  5BN8 A;  1UGL A;  3KOY A;  2KSK A;  1NRA A;  2QWQ A;  5AR0 A;  2B68 A;  1S3X A;  2B3C A;  5AQX A;  1NGF A;  1SN4 A;  2GL1 A;  2SN3 A;  3PSM A;  1NGD A;  3KOZ A;  1WMT A;  2YBR C;  2KYQ A;  2I61 A;  1WWN A;  4GNI A;  5AQR A;  5AQK A;  5AQO A;  4FSV A;  4H5V A;  5F2R A;  2YEO A;  1T7B A;  3SF4 D;  1QQM A;  5AQN A;  1KV0 A;  3LDO A;  1NPI A;  4V1D C;  2KGQ A;  1DKG D;  2KJA A;  5BPN A;  5AQH A;  1ICA A;  1DJT A;  1T1T A;  3CQX A;  2YC1 C;  1I2V A;  5AQW A;  1CN2 A;  1WT7 A;  1I6G A;  1I2U A;  3QFU A;  5AQU A;  3KOW A;  1ZVE A;  4KBO A;  2KBK A;  4H5W A;  3D2F B;  2N69 A;  1GPS A;  2KPY A;  3GDQ A;  3C7N A;  3L4I A;  1YUW A;  2MZ0 A;  1CHZ A;  1P0A A;  1I6F A;  1MYN A;  1N4N A;  5EVZ A;  2ASC A;  1MR4 A;  4UAD E;  5AQI A;  3KC6 A;  1BUP A;  1VNB A;  2ATB A;  1ZFU A;  5KK4 A;  3FZL A;  3D2E A;  3KOX A;  1NE5 A;  1NGB A;  4AAZ A;  2YIO A;  2LJM A;  3FZH A;  3AY9 A;  3IUC A;  3GKU A;  5FPD A;  2K35 A;  1NGG A;  3E7R L;  1ZYW A;  1PE4 A;  2N66 A;  1PTX A;  3L56 A;  1LQQ A;  1AHO A;  1KAX A;  3CW4 A;  1NGA A;  3M3Z A;  1HX1 A;  5AQP A;  5EXW A;  4FL9 A;  3FZM A;  2KBH A;  1QQN A;  3LDP A;  3QML A;  5AQJ A;  1L4V A;  1ATS A;  5BN9 A;  3LDL A;  1NGJ A;  2QW9 A;  3R2V A;  1BK8 A;  1K8B A;  1POI A;  2LN8 A;  2MBK A;  1FH3 A;  1LQI A;  1NRB A;  1AYJ A;  4UAE F;  5AQY A;  2QWO A;  1NGH A;  4CQK A;  2E88 A;  3A8Y A;  2E3G A;  5AQF A;  1B7D A;  1ATR A;  3D2E B;  1DQ7 A;  1KAZ A;  2LR3 A;  3FE1 A;  5AQV A;  5FPN A;  5BPM A;  1LQH A;  5FPE A;  3E7U X;  1T0Z A;  1ZUT A;  1OMY A;  1PX9 A;  2N2R A;  3FZK A;  3I33 A;  2VY6 A;  3KHW A;  3QFP A;  2M8B B;  4UAF E;  2KBJ A;  2QXL A;  1VNA A;  2E0H A;  2JDQ D;  3KVG A;  5AQT A;  2V7Z A;  1JKZ A;  1KAY A;  1BA0 A;  3ATU A;  4H5R A;  1BA1 A;  5AQM A;  2LJ7 A;  4AB0 A;  3FZF A;  3KP1 A;  1JZB A;  4HHF A;  3LDQ A;  5F0X A;  2E8A A;  2LY6 A;  1JZA A;  2BRZ A;  2NY9 X;  2N2Q A;  2QWN A;  4IO8 A;  5AQS A;  1GPT A;  2MN5 A;  3D2F A;  5F1X A;  1QQO A;  3KP0 A;  5FPM A;  1ZU3 A;  3C7N B;  2QWM A;  5AQL A;  2A7T A;  4H5T A;  4H5N A;  1OZZ A;  3LDN A;  1HPM A;  4KYP A;  1ZYV A;  1SNB A;  3HSC A;  2D56 A;  4HWI A;  5AQZ A;  2YIL A;  1P00 A;  5AQQ A;  2LI7 A;  1C56 A;  5CY0 A;  4UJ0 A;  3JXU A;  2NY8 X;  5BPL A;  4HE7 A;  2YIP A;  3GL1 A;  1SN1 A;  2LKB A;  1C55 A;  3BK3 C;  2QWP A;  1NGE A;  1TI5 A;  1NH5 A;  1NGI A;  2KHO A;  2QWR A;  5EY4 A;  5EX5 A;  1HJO A;  1T7E A;  1BRZ A; 
#chains in the Genus database with same CATH homology
 1SEG A;  1ZVG A;  2E3F A;  1JXC A;  1BCG A;  2LT8 A;  1BMR A;  4AEI A;  1B3C A;  1T7A A;  2LY5 A;  2KSK A;  1NRA A;  2B68 A;  2B3C A;  2GL1 A;  1SN4 A;  2SN3 A;  3PSM A;  1WMT A;  2YBR C;  2KYQ A;  2I61 A;  1WWN A;  2YEO A;  1T7B A;  1KV0 A;  1NPI A;  4V1D C;  2KGQ A;  2KJA A;  1ICA A;  1DJT A;  1T1T A;  1I2V A;  2YC1 C;  1CN2 A;  1WT7 A;  1I6G A;  1I2U A;  1ZVE A;  2KBK A;  2N69 A;  1GPS A;  2KPY A;  2MZ0 A;  1CHZ A;  1P0A A;  1I6F A;  1MYN A;  1N4N A;  2ASC A;  1MR4 A;  1VNB A;  2ATB A;  1ZFU A;  5KK4 A;  1NE5 A;  4AAZ A;  2LJM A;  3E7R L;  1ZYW A;  1PE4 A;  2N66 A;  1PTX A;  1LQQ A;  1AHO A;  1L4V A;  2KBH A;  1BK8 A;  1FH3 A;  1LQI A;  1NRB A;  1AYJ A;  4CQK A;  2E3G A;  1B7D A;  1DQ7 A;  2LR3 A;  1LQH A;  3E7U X;  1T0Z A;  1ZUT A;  1OMY A;  1PX9 A;  2N2R A;  2M8B B;  2KBJ A;  1JKZ A;  1VNA A;  2E0H A;  2LJ7 A;  4AB0 A;  1JZB A;  4HHF A;  2LY6 A;  1JZA A;  2BRZ A;  2NY9 X;  2N2Q A;  1GPT A;  1ZU3 A;  2A7T A;  1OZZ A;  4KYP A;  1ZYV A;  1SNB A;  1P00 A;  2LI7 A;  1C56 A;  5CY0 A;  4UJ0 A;  2NY8 X;  4HE7 A;  1SN1 A;  2LKB A;  1C55 A;  1TI5 A;  1NH5 A;  1T7E A;  1BRZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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