2YEOA

A39l mutation of scorpion toxin lqh-alpha-it
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
65
structure length
65
Chain Sequence
MVRDAYIAKNYNCVYECFRDAYCNELCTKNGASSGYCQWLGKYGNACWCYALPDNVPIRVPGKCR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords ALPHA-INSECT TOXIN LQHAIT
publication title Crystal Structures of Scorpion Alpha-Toxinsmutants Reveal Conformational Constraints that Dictate Preference for Mammalian Brain Voltage-Gated Na- Channels
rcsb
source organism Leiurus quinquestriatus hebraeus
total genus 15
structure length 65
sequence length 65
ec nomenclature
pdb deposition date 2011-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2yeoA00
2MZ0A 1BMRA 1I6GA 1ZVGA 1DJTA 1TI5A 1SN1A 1ZFUA 2N69A 1T7AA 1OMYA 1KV0A 1T0ZA 1ZVEA 1B3CA 3E7UX 2LI7A 2LY6A 2GL1A 1WMTA 1JKZA 1N4NA 1BRZA 4UJ0A 1ZUTA 1NRAA 2NY9X 1MYNA 1LQQA 2KSKA 1C56A 1CN2A 2YEOA 1NE5A 4AEIA 2KGQA 4CQKA 1MR4A 2LJ7A 2YC1C 1LQHA 1T7EA 1CHZA 2B68A 1OZZA 1SN4A 4AAZA 2BRZA 2LY5A 1AHOA 2KBHA 1PTXA 1AYJA 1GPTA 1T1TA 1JZBA 1SNBA 1WWNA 2LJMA 2B3CA 2KBKA 1B7DA 2M8BB 1ICAA 1BK8A 1C55A 2N2RA 1P00A 2A7TA 2LT8A 5CY0A 2ASCA 1NRBA 1I2UA 3PSMA 1SEGA 2KBJA 2E0HA 2N2QA 1BCGA 2E3FA 3E7RL 1VNBA 2I61A 2N66A 2SN3A 4AB0A 1GPSA 1P0AA 1WT7A 2E3GA 1PE4A 1DQ7A 1ZU3A 1NH5A 2KYQA 2LKBA 1VNAA 1L4VA 5KK4A 4V1DC 4HHFA 4KYPA 1I2VA 1T7BA 1JZAA 1JXCA 2KPYA 2YBRC 2NY8X 1ZYVA 1FH3A 1ZYWA 1I6FA 2LR3A 1LQIA 2KJAA 2ATBA 4HE7A 1PX9A 1NPIA
chains in the Genus database with same CATH superfamily
2MZ0A 3KOWA 1BMRA 1I6GA 1ZVGA 3KC6A 1DJTA 1DKGD 1TI5A 2KHOA 3CW4A 3KVGA 3D2EA 1SN1A 1ZFUA 2N69A 1T7AA 5AQVA 1OMYA 5F0XA 3L56A 1KV0A 1ATSA 1T0ZA 3LDLA 2JDQD 1ZVEA 2GMOA 1B3CA 3E7UX 3FZMA 2LI7A 2K35A 3L4IA 5BPMA 3QFPA 3KP1A 2LY6A 3FZKA 2GL1A 1WMTA 5AQGA 5EY4A 1N4NA 2QW9A 1JKZA 1BRZA 4UJ0A 5AQQA 5BPNA 1ZUTA 1POIA 1NRAA 2MN5A 3BK3C 3D2EB 3A8YA 2NY9X 5FPDA 3LDNA 1MYNA 1LQQA 2KSKA 4UAEF 2D56A 2G2KA 1C56A 1NGGA 1HJOA 1KAXA 1S3XA 3KHWA 3LDQA 3IUCA 3QMLA 4UADE 5FPEA 1CN2A 3GL1A 2YEOA 3I33A 2LN8A 1NE5A 4AEIA 4FSVA 4H5NA 2KGQA 5AQPA 5AQZA 5AQYA 1HPMA 2YIPA 3FZLA 1NGBA 3QFUA 1BA0A 1NGFA 2QWLA 4CQKA 2QXLA 1MR4A 2QWPA 3ATUA 5AQJA 1NGHA 1NGAA 2LJ7A 2QWOA 2QWQA 2YC1C 3M3ZA 3R2VA 1K8BA 1LQHA 2V7ZA 1T7EA 1ATRA 5FPNA 2VY6A 1QQOA 3QI7A 5AQUA 3SF4D 1CHZA 2B68A 1OZZA 1SN4A 3GDQA 3KP0A 4KBOA 5AQRA 4AAZA 3KOYA 2YILA 2BRZA 3D2FA 5EX5A 1KAYA 2LY5A 1AHOA 4IO8A 1PTXA 2KBHA 1KAZA 1AYJA 1GPTA 1T1TA 3CQXA 5AQIA 1JZBA 1SNBA 3LDOA 1WWNA 1QQMA 1UGLA 1NGCA 2LJMA 2B3CA 2KBKA 3ATVA 1B7DA 1HX1A 2M8BB 1BK8A 1C55A 2N2RA 5AQTA 1NGDA 1ICAA 1P00A 2A7TA 2E88A 2E2FA 2LT8A 3FZHA 4UAFE 4H5WA 5CY0A 2ASCA 1NRBA 1NGEA 3D2FB 5AQHA 1I2UA 2QWRA 5EVZA 2MBKA 3FZFA 3PSMA 1NGJA 5AQWA 1SEGA 2KBJA 2E0HA 5AQKA 2N2QA 4FL9A 1BCGA 5AR0A 2E3FA 2QWNA 3E7RL 1VNBA 3AY9A 2E8AA 3C7NA 3KOXA 5AQOA 2I61A 2N66A 1YUWA 2SN3A 4AB0A 1GPSA 4H5TA 3L6QA 3LDPA 5AQXA 2BUPA 1P0AA 1XRSB 1WT7A 2E3GA 5FPMA 1PE4A 1DQ7A 4H5RA 1QQNA 5EXWA 3FE1A 1ZU3A 1NH5A 2KYQA 2LKBA 3GKUA 3HSCA 1BA1A 5AQMA 5BN9A 1VNAA 1L4VA 3C7NB 3KOZA 5KK4A 2QWMA 4V1DC 4HHFA 2YIOA 3JXUA 4KYPA 5BN8A 1I2VA 5AQLA 1NGIA 5BPLA 4H5VA 1T7BA 5AQFA 1JZAA 4HWIA 1JXCA 2KPYA 2YBRC 2NY8X 5F1XA 1ZYVA 5AQNA 1FH3A 5F2RA 1ZYWA 1I6FA 2LR3A 1LQIA 2KJAA 2ATBA 4GNIA 5AQSA 1BUPA 4HE7A 1PX9A 1NPIA
chains in the Genus database with same CATH topology
2MZ0A 1BMRA 1I6GA 1ZVGA 1DJTA 1TI5A 1SN1A 1ZFUA 2N69A 1T7AA 1OMYA 1KV0A 1T0ZA 1ZVEA 1B3CA 3E7UX 2LI7A 2LY6A 2GL1A 1WMTA 1JKZA 1N4NA 1BRZA 4UJ0A 1ZUTA 1NRAA 2NY9X 1MYNA 1LQQA 2KSKA 1C56A 1CN2A 2YEOA 1NE5A 4AEIA 2KGQA 4CQKA 1MR4A 2LJ7A 2YC1C 1LQHA 1T7EA 1CHZA 2B68A 1OZZA 1SN4A 4AAZA 2BRZA 2LY5A 1AHOA 2KBHA 1PTXA 1AYJA 1GPTA 1T1TA 1JZBA 1SNBA 1WWNA 2LJMA 2B3CA 2KBKA 1B7DA 2M8BB 1ICAA 1BK8A 1C55A 2N2RA 1P00A 2A7TA 2LT8A 5CY0A 2ASCA 1NRBA 1I2UA 3PSMA 1SEGA 2KBJA 2E0HA 2N2QA 1BCGA 2E3FA 3E7RL 1VNBA 2I61A 2N66A 2SN3A 4AB0A 1GPSA 1P0AA 1WT7A 2E3GA 1PE4A 1DQ7A 1ZU3A 1NH5A 2KYQA 2LKBA 1VNAA 1L4VA 5KK4A 4V1DC 4HHFA 4KYPA 1I2VA 1T7BA 1JZAA 1JXCA 2KPYA 2YBRC 2NY8X 1ZYVA 1FH3A 1ZYWA 1I6FA 2LR3A 1LQIA 2KJAA 2ATBA 4HE7A 1PX9A 1NPIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MZ0 A;  1BMR A;  1I6G A;  1ZVG A;  1DJT A;  1TI5 A;  1SN1 A;  1ZFU A;  2N69 A;  1T7A A;  1OMY A;  1KV0 A;  1T0Z A;  1ZVE A;  1B3C A;  3E7U X;  2LI7 A;  2LY6 A;  2GL1 A;  1WMT A;  1JKZ A;  1N4N A;  1BRZ A;  4UJ0 A;  1ZUT A;  1NRA A;  2NY9 X;  1MYN A;  1LQQ A;  2KSK A;  1C56 A;  1CN2 A;  2YEO A;  1NE5 A;  4AEI A;  2KGQ A;  4CQK A;  1MR4 A;  2LJ7 A;  2YC1 C;  1LQH A;  1T7E A;  1CHZ A;  2B68 A;  1OZZ A;  1SN4 A;  4AAZ A;  2BRZ A;  2LY5 A;  1AHO A;  2KBH A;  1PTX A;  1AYJ A;  1GPT A;  1T1T A;  1JZB A;  1SNB A;  1WWN A;  2LJM A;  2B3C A;  2KBK A;  1B7D A;  2M8B B;  1ICA A;  1BK8 A;  1C55 A;  2N2R A;  1P00 A;  2A7T A;  2LT8 A;  5CY0 A;  2ASC A;  1NRB A;  1I2U A;  3PSM A;  1SEG A;  2KBJ A;  2E0H A;  2N2Q A;  1BCG A;  2E3F A;  3E7R L;  1VNB A;  2I61 A;  2N66 A;  2SN3 A;  4AB0 A;  1GPS A;  1P0A A;  1WT7 A;  2E3G A;  1PE4 A;  1DQ7 A;  1ZU3 A;  1NH5 A;  2KYQ A;  2LKB A;  1VNA A;  1L4V A;  5KK4 A;  4V1D C;  4HHF A;  4KYP A;  1I2V A;  1T7B A;  1JZA A;  1JXC A;  2KPY A;  2YBR C;  2NY8 X;  1ZYV A;  1FH3 A;  1ZYW A;  1I6F A;  2LR3 A;  1LQI A;  2KJA A;  2ATB A;  4HE7 A;  1PX9 A;  1NPI A; 
#chains in the Genus database with same CATH topology
 2MZ0 A;  3KOW A;  1BMR A;  1I6G A;  1ZVG A;  3KC6 A;  1DJT A;  1DKG D;  1TI5 A;  2KHO A;  3CW4 A;  3KVG A;  3D2E A;  1SN1 A;  1ZFU A;  2N69 A;  1T7A A;  5AQV A;  1OMY A;  5F0X A;  3L56 A;  1KV0 A;  1ATS A;  1T0Z A;  3LDL A;  2JDQ D;  1ZVE A;  2GMO A;  1B3C A;  3E7U X;  3FZM A;  2LI7 A;  2K35 A;  3L4I A;  5BPM A;  3QFP A;  3KP1 A;  2LY6 A;  3FZK A;  2GL1 A;  1WMT A;  5AQG A;  5EY4 A;  1N4N A;  2QW9 A;  1JKZ A;  1BRZ A;  4UJ0 A;  5AQQ A;  5BPN A;  1ZUT A;  1POI A;  1NRA A;  2MN5 A;  3BK3 C;  3D2E B;  3A8Y A;  2NY9 X;  5FPD A;  3LDN A;  1MYN A;  1LQQ A;  2KSK A;  4UAE F;  2D56 A;  2G2K A;  1C56 A;  1NGG A;  1HJO A;  1KAX A;  1S3X A;  3KHW A;  3LDQ A;  3IUC A;  3QML A;  4UAD E;  5FPE A;  1CN2 A;  3GL1 A;  2YEO A;  3I33 A;  2LN8 A;  1NE5 A;  4AEI A;  4FSV A;  4H5N A;  2KGQ A;  5AQP A;  5AQZ A;  5AQY A;  1HPM A;  2YIP A;  3FZL A;  1NGB A;  3QFU A;  1BA0 A;  1NGF A;  2QWL A;  4CQK A;  2QXL A;  1MR4 A;  2QWP A;  3ATU A;  5AQJ A;  1NGH A;  1NGA A;  2LJ7 A;  2QWO A;  2QWQ A;  2YC1 C;  3M3Z A;  3R2V A;  1K8B A;  1LQH A;  2V7Z A;  1T7E A;  1ATR A;  5FPN A;  2VY6 A;  1QQO A;  3QI7 A;  5AQU A;  3SF4 D;  1CHZ A;  2B68 A;  1OZZ A;  1SN4 A;  3GDQ A;  3KP0 A;  4KBO A;  5AQR A;  4AAZ A;  3KOY A;  2YIL A;  2BRZ A;  3D2F A;  5EX5 A;  1KAY A;  2LY5 A;  1AHO A;  4IO8 A;  1PTX A;  2KBH A;  1KAZ A;  1AYJ A;  1GPT A;  1T1T A;  3CQX A;  5AQI A;  1JZB A;  1SNB A;  3LDO A;  1WWN A;  1QQM A;  1UGL A;  1NGC A;  2LJM A;  2B3C A;  2KBK A;  3ATV A;  1B7D A;  1HX1 A;  2M8B B;  1BK8 A;  1C55 A;  2N2R A;  5AQT A;  1NGD A;  1ICA A;  1P00 A;  2A7T A;  2E88 A;  2E2F A;  2LT8 A;  3FZH A;  4UAF E;  4H5W A;  5CY0 A;  2ASC A;  1NRB A;  1NGE A;  3D2F B;  5AQH A;  1I2U A;  2QWR A;  5EVZ A;  2MBK A;  3FZF A;  3PSM A;  1NGJ A;  5AQW A;  1SEG A;  2KBJ A;  2E0H A;  5AQK A;  2N2Q A;  4FL9 A;  1BCG A;  5AR0 A;  2E3F A;  2QWN A;  3E7R L;  1VNB A;  3AY9 A;  2E8A A;  3C7N A;  3KOX A;  5AQO A;  2I61 A;  2N66 A;  1YUW A;  2SN3 A;  4AB0 A;  1GPS A;  4H5T A;  3L6Q A;  3LDP A;  5AQX A;  2BUP A;  1P0A A;  1XRS B;  1WT7 A;  2E3G A;  5FPM A;  1PE4 A;  1DQ7 A;  4H5R A;  1QQN A;  5EXW A;  3FE1 A;  1ZU3 A;  1NH5 A;  2KYQ A;  2LKB A;  3GKU A;  3HSC A;  1BA1 A;  5AQM A;  5BN9 A;  1VNA A;  1L4V A;  3C7N B;  3KOZ A;  5KK4 A;  2QWM A;  4V1D C;  4HHF A;  2YIO A;  3JXU A;  4KYP A;  5BN8 A;  1I2V A;  5AQL A;  1NGI A;  5BPL A;  4H5V A;  1T7B A;  5AQF A;  1JZA A;  4HWI A;  1JXC A;  2KPY A;  2YBR C;  2NY8 X;  5F1X A;  1ZYV A;  5AQN A;  1FH3 A;  5F2R A;  1ZYW A;  1I6F A;  2LR3 A;  1LQI A;  2KJA A;  2ATB A;  4GNI A;  5AQS A;  1BUP A;  4HE7 A;  1PX9 A;  1NPI A; 
#chains in the Genus database with same CATH homology
 2MZ0 A;  1BMR A;  1I6G A;  1ZVG A;  1DJT A;  1TI5 A;  1SN1 A;  1ZFU A;  2N69 A;  1T7A A;  1OMY A;  1KV0 A;  1T0Z A;  1ZVE A;  1B3C A;  3E7U X;  2LI7 A;  2LY6 A;  2GL1 A;  1WMT A;  1JKZ A;  1N4N A;  1BRZ A;  4UJ0 A;  1ZUT A;  1NRA A;  2NY9 X;  1MYN A;  1LQQ A;  2KSK A;  1C56 A;  1CN2 A;  2YEO A;  1NE5 A;  4AEI A;  2KGQ A;  4CQK A;  1MR4 A;  2LJ7 A;  2YC1 C;  1LQH A;  1T7E A;  1CHZ A;  2B68 A;  1OZZ A;  1SN4 A;  4AAZ A;  2BRZ A;  2LY5 A;  1AHO A;  2KBH A;  1PTX A;  1AYJ A;  1GPT A;  1T1T A;  1JZB A;  1SNB A;  1WWN A;  2LJM A;  2B3C A;  2KBK A;  1B7D A;  2M8B B;  1ICA A;  1BK8 A;  1C55 A;  2N2R A;  1P00 A;  2A7T A;  2LT8 A;  5CY0 A;  2ASC A;  1NRB A;  1I2U A;  3PSM A;  1SEG A;  2KBJ A;  2E0H A;  2N2Q A;  1BCG A;  2E3F A;  3E7R L;  1VNB A;  2I61 A;  2N66 A;  2SN3 A;  4AB0 A;  1GPS A;  1P0A A;  1WT7 A;  2E3G A;  1PE4 A;  1DQ7 A;  1ZU3 A;  1NH5 A;  2KYQ A;  2LKB A;  1VNA A;  1L4V A;  5KK4 A;  4V1D C;  4HHF A;  4KYP A;  1I2V A;  1T7B A;  1JZA A;  1JXC A;  2KPY A;  2YBR C;  2NY8 X;  1ZYV A;  1FH3 A;  1ZYW A;  1I6F A;  2LR3 A;  1LQI A;  2KJA A;  2ATB A;  4HE7 A;  1PX9 A;  1NPI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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