1I2UA

Nmr solution structures of antifungal heliomicin
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
44
structure length
44
Chain Sequence
DKLIGSCVWGAVNYTSDCNGECKRRGYKGGHCGSFANVNCWCET
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antifungal protein
molecule keywords DEFENSIN HELIOMICIN
publication title Solution structures of the antifungal heliomicin and a selected variant with both antibacterial and antifungal activities.
pubmed doi rcsb
source organism Heliothis virescens
total genus 11
structure length 44
sequence length 44
ec nomenclature
pdb deposition date 2001-02-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1i2uA00
2ASCA 2NY8X 1B3CA 1NPIA 2KPYA 2N69A 1BMRA 1P0AA 1KV0A 1AYJA 1T7BA 2KBHA 2E3GA 1CN2A 1PE4A 2YC1C 3E7UX 2MZ0A 1SN4A 2B3CA 1I2VA 4AB0A 1BK8A 2I61A 2E0HA 4V1DC 2LJMA 1L4VA 2LI7A 5KK4A 1OMYA 1SN1A 1LQQA 1ZVGA 1JZBA 4KYPA 1T0ZA 1ZUTA 1ICAA 2LKBA 1GPSA 1PX9A 1MYNA 1LQIA 1T1TA 1ZVEA 1SNBA 1TI5A 1SEGA 2M8BB 4AEIA 1MR4A 1BCGA 2BRZA 2ATBA 2NY9X 1PTXA 2KBJA 1JXCA 2LT8A 2LR3A 1NRBA 1I2UA 1B7DA 4CQKA 1NRAA 2GL1A 2KBKA 1C56A 2N2RA 2E3FA 1ZU3A 2A7TA 1I6FA 1WMTA 4UJ0A 2N2QA 1DJTA 1DQ7A 4HE7A 1VNAA 2KGQA 1I6GA 1C55A 2YEOA 2LY6A 4AAZA 2N66A 1CHZA 1ZYVA 1ZFUA 1ZYWA 2KSKA 1JKZA 2B68A 2LJ7A 2KYQA 1NH5A 1WT7A 1WWNA 1AHOA 4HHFA 1FH3A 3E7RL 5CY0A 1NE5A 1LQHA 2KJAA 1VNBA 2YBRC 1JZAA 2SN3A 1T7AA 2LY5A 1GPTA 1T7EA 1OZZA 3PSMA 1BRZA 1N4NA 1P00A
chains in the Genus database with same CATH superfamily
2QWPA 4H5WA 2ASCA 2G2KA 2NY8X 1BA1A 1B3CA 1NPIA 2KPYA 1ATRA 2N69A 1BMRA 1P0AA 1KV0A 3KP1A 3A8YA 1AYJA 3C7NB 1T7BA 2KBHA 3I33A 2E3GA 1KAYA 3M3ZA 1PE4A 2YC1C 3AY9A 1NGHA 3E7UX 3LDOA 2MZ0A 4H5VA 1SN4A 3ATUA 5AR0A 1NGJA 1BUPA 2B3CA 1BA0A 1I2VA 4UAEF 3FZMA 4AB0A 1DKGD 1BK8A 2I61A 3R2VA 5EY4A 2E0HA 4V1DC 5AQNA 2LJMA 1L4VA 2LI7A 5KK4A 3KVGA 5F1XA 1OMYA 2E2FA 5EVZA 2GMOA 2QWQA 5AQGA 1SN1A 2QWOA 1LQQA 4GNIA 1ZVGA 1JZBA 4KYPA 1T0ZA 1ZUTA 3FZKA 2LKBA 3C7NA 3L4IA 1ICAA 1NGCA 4KBOA 1GPSA 3KC6A 3FZFA 1PX9A 2QWLA 2QWRA 3ATVA 3LDLA 4FL9A 5AQYA 5BN9A 5AQSA 1HPMA 1MYNA 5AQOA 2YILA 3HSCA 5AQHA 5BPMA 4H5TA 3KOXA 5AQIA 1LQIA 1T1TA 1ZVEA 3FZHA 3KP0A 5AQFA 5FPDA 3LDQA 1SNBA 1TI5A 2VY6A 5F2RA 1NGEA 5AQUA 5AQQA 1SEGA 2M8BB 5FPNA 4AEIA 2QWMA 3QMLA 4IO8A 1MR4A 1UGLA 1HX1A 1BCGA 2QW9A 3CW4A 5AQLA 5F0XA 3LDNA 2BRZA 2ATBA 2NY9X 4HWIA 1PTXA 2KBJA 1JXCA 2LT8A 4UAFE 2JDQD 2LR3A 1NRBA 2K35A 3IUCA 2QXLA 5AQVA 3L56A 5AQTA 1I2UA 1B7DA 4CQKA 1NGFA 1NRAA 5AQWA 3GDQA 2GL1A 2KBKA 3D2FB 5AQMA 1CN2A 1QQNA 2KHOA 1QQOA 5AQZA 5EXWA 5EX5A 1C56A 2N2RA 5AQKA 2E3FA 1KAXA 1ZU3A 2A7TA 1I6FA 1WMTA 4UJ0A 5BN8A 3QFUA 2QWNA 2N2QA 1S3XA 3FZLA 1KAZA 1DJTA 1DQ7A 4HE7A 1HJOA 3SF4D 5BPNA 1VNAA 2KGQA 2BUPA 1I6GA 1NGGA 3L6QA 1C55A 2YEOA 2YIPA 2LY6A 4AAZA 1K8BA 1POIA 5AQXA 4FSVA 1QQMA 2N66A 1CHZA 1ZYVA 2YIOA 1ZFUA 1ZYWA 2KSKA 1JKZA 2B68A 3CQXA 2LJ7A 2KYQA 3LDPA 1YUWA 3D2FA 4H5NA 1NH5A 2D56A 5AQJA 1WT7A 1WWNA 3KOZA 1AHOA 1NGAA 4HHFA 2V7ZA 1NGDA 3E7RL 4H5RA 5CY0A 3KOWA 1FH3A 5BPLA 1NE5A 1NGIA 1LQHA 2KJAA 1VNBA 3GL1A 5FPMA 2LN8A 2MBKA 1JZAA 2YBRC 3QI7A 3FE1A 3BK3C 3GKUA 2E8AA 3KHWA 5FPEA 3D2EA 2SN3A 1T7AA 2LY5A 5AQPA 5AQRA 1NGBA 2MN5A 3QFPA 1GPTA 1XRSB 1T7EA 3JXUA 1OZZA 2E88A 3D2EB 3PSMA 1BRZA 1ATSA 4UADE 1N4NA 1P00A 3KOYA
chains in the Genus database with same CATH topology
2ASCA 2NY8X 1B3CA 1NPIA 2KPYA 2N69A 1BMRA 1P0AA 1KV0A 1AYJA 1T7BA 2KBHA 2E3GA 1CN2A 1PE4A 2YC1C 3E7UX 2MZ0A 1SN4A 2B3CA 1I2VA 4AB0A 1BK8A 2I61A 2E0HA 4V1DC 2LJMA 1L4VA 2LI7A 5KK4A 1OMYA 1SN1A 1LQQA 1ZVGA 1JZBA 4KYPA 1T0ZA 1ZUTA 1ICAA 2LKBA 1GPSA 1PX9A 1MYNA 1LQIA 1T1TA 1ZVEA 1SNBA 1TI5A 1SEGA 2M8BB 4AEIA 1MR4A 1BCGA 2BRZA 2ATBA 2NY9X 1PTXA 2KBJA 1JXCA 2LT8A 2LR3A 1NRBA 1I2UA 1B7DA 4CQKA 1NRAA 2GL1A 2KBKA 1C56A 2N2RA 2E3FA 1ZU3A 2A7TA 1I6FA 1WMTA 4UJ0A 2N2QA 1DJTA 1DQ7A 4HE7A 1VNAA 2KGQA 1I6GA 1C55A 2YEOA 2LY6A 4AAZA 2N66A 1CHZA 1ZYVA 1ZFUA 1ZYWA 2KSKA 1JKZA 2B68A 2LJ7A 2KYQA 1NH5A 1WT7A 1WWNA 1AHOA 4HHFA 1FH3A 3E7RL 5CY0A 1NE5A 1LQHA 2KJAA 1VNBA 2YBRC 1JZAA 2SN3A 1T7AA 2LY5A 1GPTA 1T7EA 1OZZA 3PSMA 1BRZA 1N4NA 1P00A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ASC A;  2NY8 X;  1B3C A;  1NPI A;  2KPY A;  2N69 A;  1BMR A;  1P0A A;  1KV0 A;  1AYJ A;  1T7B A;  2KBH A;  2E3G A;  1CN2 A;  1PE4 A;  2YC1 C;  3E7U X;  2MZ0 A;  1SN4 A;  2B3C A;  1I2V A;  4AB0 A;  1BK8 A;  2I61 A;  2E0H A;  4V1D C;  2LJM A;  1L4V A;  2LI7 A;  5KK4 A;  1OMY A;  1SN1 A;  1LQQ A;  1ZVG A;  1JZB A;  4KYP A;  1T0Z A;  1ZUT A;  1ICA A;  2LKB A;  1GPS A;  1PX9 A;  1MYN A;  1LQI A;  1T1T A;  1ZVE A;  1SNB A;  1TI5 A;  1SEG A;  2M8B B;  4AEI A;  1MR4 A;  1BCG A;  2BRZ A;  2ATB A;  2NY9 X;  1PTX A;  2KBJ A;  1JXC A;  2LT8 A;  2LR3 A;  1NRB A;  1I2U A;  1B7D A;  4CQK A;  1NRA A;  2GL1 A;  2KBK A;  1C56 A;  2N2R A;  2E3F A;  1ZU3 A;  2A7T A;  1I6F A;  1WMT A;  4UJ0 A;  2N2Q A;  1DJT A;  1DQ7 A;  4HE7 A;  1VNA A;  2KGQ A;  1I6G A;  1C55 A;  2YEO A;  2LY6 A;  4AAZ A;  2N66 A;  1CHZ A;  1ZYV A;  1ZFU A;  1ZYW A;  2KSK A;  1JKZ A;  2B68 A;  2LJ7 A;  2KYQ A;  1NH5 A;  1WT7 A;  1WWN A;  1AHO A;  4HHF A;  1FH3 A;  3E7R L;  5CY0 A;  1NE5 A;  1LQH A;  2KJA A;  1VNB A;  2YBR C;  1JZA A;  2SN3 A;  1T7A A;  2LY5 A;  1GPT A;  1T7E A;  1OZZ A;  3PSM A;  1BRZ A;  1N4N A;  1P00 A; 
#chains in the Genus database with same CATH topology
 2QWP A;  4H5W A;  2ASC A;  2G2K A;  2NY8 X;  1BA1 A;  1B3C A;  1NPI A;  2KPY A;  1ATR A;  2N69 A;  1BMR A;  1P0A A;  1KV0 A;  3KP1 A;  3A8Y A;  1AYJ A;  3C7N B;  1T7B A;  2KBH A;  3I33 A;  2E3G A;  1KAY A;  3M3Z A;  1PE4 A;  2YC1 C;  3AY9 A;  1NGH A;  3E7U X;  3LDO A;  2MZ0 A;  4H5V A;  1SN4 A;  3ATU A;  5AR0 A;  1NGJ A;  1BUP A;  2B3C A;  1BA0 A;  1I2V A;  4UAE F;  3FZM A;  4AB0 A;  1DKG D;  1BK8 A;  2I61 A;  3R2V A;  5EY4 A;  2E0H A;  4V1D C;  5AQN A;  2LJM A;  1L4V A;  2LI7 A;  5KK4 A;  3KVG A;  5F1X A;  1OMY A;  2E2F A;  5EVZ A;  2GMO A;  2QWQ A;  5AQG A;  1SN1 A;  2QWO A;  1LQQ A;  4GNI A;  1ZVG A;  1JZB A;  4KYP A;  1T0Z A;  1ZUT A;  3FZK A;  2LKB A;  3C7N A;  3L4I A;  1ICA A;  1NGC A;  4KBO A;  1GPS A;  3KC6 A;  3FZF A;  1PX9 A;  2QWL A;  2QWR A;  3ATV A;  3LDL A;  4FL9 A;  5AQY A;  5BN9 A;  5AQS A;  1HPM A;  1MYN A;  5AQO A;  2YIL A;  3HSC A;  5AQH A;  5BPM A;  4H5T A;  3KOX A;  5AQI A;  1LQI A;  1T1T A;  1ZVE A;  3FZH A;  3KP0 A;  5AQF A;  5FPD A;  3LDQ A;  1SNB A;  1TI5 A;  2VY6 A;  5F2R A;  1NGE A;  5AQU A;  5AQQ A;  1SEG A;  2M8B B;  5FPN A;  4AEI A;  2QWM A;  3QML A;  4IO8 A;  1MR4 A;  1UGL A;  1HX1 A;  1BCG A;  2QW9 A;  3CW4 A;  5AQL A;  5F0X A;  3LDN A;  2BRZ A;  2ATB A;  2NY9 X;  4HWI A;  1PTX A;  2KBJ A;  1JXC A;  2LT8 A;  4UAF E;  2JDQ D;  2LR3 A;  1NRB A;  2K35 A;  3IUC A;  2QXL A;  5AQV A;  3L56 A;  5AQT A;  1I2U A;  1B7D A;  4CQK A;  1NGF A;  1NRA A;  5AQW A;  3GDQ A;  2GL1 A;  2KBK A;  3D2F B;  5AQM A;  1CN2 A;  1QQN A;  2KHO A;  1QQO A;  5AQZ A;  5EXW A;  5EX5 A;  1C56 A;  2N2R A;  5AQK A;  2E3F A;  1KAX A;  1ZU3 A;  2A7T A;  1I6F A;  1WMT A;  4UJ0 A;  5BN8 A;  3QFU A;  2QWN A;  2N2Q A;  1S3X A;  3FZL A;  1KAZ A;  1DJT A;  1DQ7 A;  4HE7 A;  1HJO A;  3SF4 D;  5BPN A;  1VNA A;  2KGQ A;  2BUP A;  1I6G A;  1NGG A;  3L6Q A;  1C55 A;  2YEO A;  2YIP A;  2LY6 A;  4AAZ A;  1K8B A;  1POI A;  5AQX A;  4FSV A;  1QQM A;  2N66 A;  1CHZ A;  1ZYV A;  2YIO A;  1ZFU A;  1ZYW A;  2KSK A;  1JKZ A;  2B68 A;  3CQX A;  2LJ7 A;  2KYQ A;  3LDP A;  1YUW A;  3D2F A;  4H5N A;  1NH5 A;  2D56 A;  5AQJ A;  1WT7 A;  1WWN A;  3KOZ A;  1AHO A;  1NGA A;  4HHF A;  2V7Z A;  1NGD A;  3E7R L;  4H5R A;  5CY0 A;  3KOW A;  1FH3 A;  5BPL A;  1NE5 A;  1NGI A;  1LQH A;  2KJA A;  1VNB A;  3GL1 A;  5FPM A;  2LN8 A;  2MBK A;  1JZA A;  2YBR C;  3QI7 A;  3FE1 A;  3BK3 C;  3GKU A;  2E8A A;  3KHW A;  5FPE A;  3D2E A;  2SN3 A;  1T7A A;  2LY5 A;  5AQP A;  5AQR A;  1NGB A;  2MN5 A;  3QFP A;  1GPT A;  1XRS B;  1T7E A;  3JXU A;  1OZZ A;  2E88 A;  3D2E B;  3PSM A;  1BRZ A;  1ATS A;  4UAD E;  1N4N A;  1P00 A;  3KOY A; 
#chains in the Genus database with same CATH homology
 2ASC A;  2NY8 X;  1B3C A;  1NPI A;  2KPY A;  2N69 A;  1BMR A;  1P0A A;  1KV0 A;  1AYJ A;  1T7B A;  2KBH A;  2E3G A;  1CN2 A;  1PE4 A;  2YC1 C;  3E7U X;  2MZ0 A;  1SN4 A;  2B3C A;  1I2V A;  4AB0 A;  1BK8 A;  2I61 A;  2E0H A;  4V1D C;  2LJM A;  1L4V A;  2LI7 A;  5KK4 A;  1OMY A;  1SN1 A;  1LQQ A;  1ZVG A;  1JZB A;  4KYP A;  1T0Z A;  1ZUT A;  1ICA A;  2LKB A;  1GPS A;  1PX9 A;  1MYN A;  1LQI A;  1T1T A;  1ZVE A;  1SNB A;  1TI5 A;  1SEG A;  2M8B B;  4AEI A;  1MR4 A;  1BCG A;  2BRZ A;  2ATB A;  2NY9 X;  1PTX A;  2KBJ A;  1JXC A;  2LT8 A;  2LR3 A;  1NRB A;  1I2U A;  1B7D A;  4CQK A;  1NRA A;  2GL1 A;  2KBK A;  1C56 A;  2N2R A;  2E3F A;  1ZU3 A;  2A7T A;  1I6F A;  1WMT A;  4UJ0 A;  2N2Q A;  1DJT A;  1DQ7 A;  4HE7 A;  1VNA A;  2KGQ A;  1I6G A;  1C55 A;  2YEO A;  2LY6 A;  4AAZ A;  2N66 A;  1CHZ A;  1ZYV A;  1ZFU A;  1ZYW A;  2KSK A;  1JKZ A;  2B68 A;  2LJ7 A;  2KYQ A;  1NH5 A;  1WT7 A;  1WWN A;  1AHO A;  4HHF A;  1FH3 A;  3E7R L;  5CY0 A;  1NE5 A;  1LQH A;  2KJA A;  1VNB A;  2YBR C;  1JZA A;  2SN3 A;  1T7A A;  2LY5 A;  1GPT A;  1T7E A;  1OZZ A;  3PSM A;  1BRZ A;  1N4N A;  1P00 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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