2ASCA

Scorpion toxin lqh-alpha-it
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
65
structure length
65
Chain Sequence
MVRDAYIAKNYNCVYECFRDAYCNELCTKNGASSGYCQWAGKYGNACWCYALPDNVPIRVPGKCR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords neurotoxin alpha-IT
publication title X-ray structures of Lqh-alpha-IT and Lqh-alpha-IT8D9D10V mutant
rcsb
source organism Leiurus quinquestriatus
total genus 15
structure length 65
sequence length 65
ec nomenclature
pdb deposition date 2005-08-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2ascA00
1P00A 1I2VA 1JZBA 2KJAA 1ZYVA 2LKBA 1DQ7A 2BRZA 2KSKA 2M8BB 1NPIA 2LI7A 2SN3A 1PX9A 2N69A 1JXCA 1FH3A 1OZZA 1ZFUA 1CHZA 1BMRA 1PE4A 1C56A 2YC1C 1T0ZA 1SEGA 2B3CA 2N2RA 4HHFA 1BK8A 2I61A 2LT8A 2KPYA 1AHOA 2LY6A 1ZVGA 1C55A 2ASCA 2GL1A 2LR3A 1SN1A 2E3FA 2A7TA 1NH5A 4AAZA 4AB0A 1I2UA 1T7BA 1P0AA 1WT7A 1BCGA 1GPTA 1GPSA 1JZAA 5KK4A 3E7RL 1SNBA 1VNAA 1MR4A 1LQQA 1WMTA 1ZYWA 1NRBA 1CN2A 2LJ7A 4KYPA 5CY0A 1WWNA 1B3CA 4HE7A 2E3GA 1T7AA 1T1TA 1ZVEA 1B7DA 2KBHA 2LY5A 1ZUTA 1JKZA 4UJ0A 2MZ0A 1L4VA 1TI5A 1NRAA 1MYNA 2E0HA 2B68A 1N4NA 1T7EA 2NY9X 1VNBA 1PTXA 2KBJA 2KGQA 1OMYA 2YEOA 4AEIA 2KBKA 4CQKA 2KYQA 2YBRC 1BRZA 1SN4A 1AYJA 1LQIA 2N66A 3E7UX 1I6GA 1I6FA 2LJMA 1KV0A 1DJTA 1LQHA 2NY8X 4V1DC 1NE5A 1ZU3A 2ATBA 2N2QA 1ICAA 3PSMA
chains in the Genus database with same CATH superfamily
1P00A 1I2VA 2QWPA 1JZBA 2KJAA 1ZYVA 5AQKA 3FZHA 2E2FA 2LKBA 3QI7A 1DQ7A 3LDOA 4FL9A 3L56A 5AQRA 2BRZA 5AQSA 2KSKA 2M8BB 1NPIA 2LI7A 2SN3A 1PX9A 2N69A 1JXCA 1HJOA 2YIOA 4UADE 3C7NB 2D56A 2QWMA 5BPMA 1NGGA 1FH3A 5EVZA 1OZZA 5AQNA 2MBKA 3FZKA 1ZFUA 1KAZA 3QFPA 1CHZA 5BPNA 3AY9A 5F1XA 1BMRA 1PE4A 1C56A 5AQZA 5F0XA 3L6QA 2YC1C 2YILA 2QWNA 3KP0A 4H5TA 1NGHA 2GMOA 2K35A 1T0ZA 5AQMA 1SEGA 4H5VA 2B3CA 2N2RA 4HHFA 4HWIA 1BK8A 2I61A 3D2FB 2G2KA 2KPYA 2LT8A 2QXLA 1NGEA 1NGFA 1QQOA 5AQWA 2KHOA 2MN5A 5BN8A 1AHOA 2LY6A 1S3XA 5AQUA 1ZVGA 5BN9A 1C55A 2ASCA 1NGJA 2GL1A 2LR3A 3IUCA 5FPDA 1POIA 1SN1A 2E3FA 5AQTA 2E88A 2A7TA 1NH5A 4AAZA 5AQVA 4AB0A 1I2UA 1T7BA 5AQXA 1P0AA 1WT7A 1BCGA 3C7NA 3JXUA 3LDPA 3KOZA 3QFUA 5AQOA 2QWRA 1GPTA 1GPSA 1K8BA 3LDQA 3FZLA 1JZAA 3M3ZA 5KK4A 1NGDA 4H5NA 5EXWA 3E7RL 5AQHA 1SNBA 1VNAA 1ICAA 4FSVA 1KAYA 1MR4A 1LQQA 5AQJA 1WMTA 1ZYWA 3KHWA 1BA1A 1HX1A 4UAFE 1XRSB 1NRBA 1QQNA 2E8AA 3QMLA 5BPLA 5AQIA 3GDQA 1HPMA 1CN2A 3D2FA 5EX5A 2LJ7A 4KYPA 1NGCA 1ATSA 1BA0A 1WWNA 5CY0A 5FPEA 1B3CA 3FE1A 1ATRA 2V7ZA 4HE7A 2E3GA 1T7AA 1BUPA 3CW4A 1NGIA 1T1TA 1ZVEA 1DKGD 1B7DA 2KBHA 2QWOA 3KOXA 3BK3C 1NGBA 2QW9A 3LDLA 2BUPA 5FPMA 2LY5A 1ZUTA 4KBOA 5AQQA 2VY6A 1JKZA 4UJ0A 3I33A 5FPNA 2MZ0A 3ATVA 1TI5A 1L4VA 1NRAA 1MYNA 2E0HA 3HSCA 2B68A 3CQXA 3KOYA 3A8YA 4UAEF 1N4NA 1T7EA 2LN8A 1QQMA 2NY9X 5AR0A 5EY4A 3ATUA 1KAXA 3FZFA 2JDQD 5AQLA 1VNBA 1PTXA 2KBJA 5AQPA 2KGQA 1OMYA 1YUWA 3KP1A 4IO8A 3L4IA 2YEOA 4AEIA 2KBKA 3KOWA 2YIPA 2KYQA 4GNIA 2YBRC 4H5RA 4CQKA 3R2VA 5AQFA 3SF4D 2QWQA 5AQGA 1BRZA 3LDNA 1SN4A 1AYJA 1LQIA 4H5WA 2N66A 3GKUA 3E7UX 3D2EB 1I6GA 1I6FA 2LJMA 1KV0A 1DJTA 3D2EA 2QWLA 3GL1A 1LQHA 2NY8X 4V1DC 5F2RA 1NGAA 1NE5A 1ZU3A 2ATBA 3FZMA 2N2QA 5AQYA 3KC6A 3KVGA 1UGLA 3PSMA
chains in the Genus database with same CATH topology
1P00A 1I2VA 1JZBA 2KJAA 1ZYVA 2LKBA 1DQ7A 2BRZA 2KSKA 2M8BB 1NPIA 2LI7A 2SN3A 1PX9A 2N69A 1JXCA 1FH3A 1OZZA 1ZFUA 1CHZA 1BMRA 1PE4A 1C56A 2YC1C 1T0ZA 1SEGA 2B3CA 2N2RA 4HHFA 1BK8A 2I61A 2LT8A 2KPYA 1AHOA 2LY6A 1ZVGA 1C55A 2ASCA 2GL1A 2LR3A 1SN1A 2E3FA 2A7TA 1NH5A 4AAZA 4AB0A 1I2UA 1T7BA 1P0AA 1WT7A 1BCGA 1GPTA 1GPSA 1JZAA 5KK4A 3E7RL 1SNBA 1VNAA 1MR4A 1LQQA 1WMTA 1ZYWA 1NRBA 1CN2A 2LJ7A 4KYPA 5CY0A 1WWNA 1B3CA 4HE7A 2E3GA 1T7AA 1T1TA 1ZVEA 1B7DA 2KBHA 2LY5A 1ZUTA 1JKZA 4UJ0A 2MZ0A 1L4VA 1TI5A 1NRAA 1MYNA 2E0HA 2B68A 1N4NA 1T7EA 2NY9X 1VNBA 1PTXA 2KBJA 2KGQA 1OMYA 2YEOA 4AEIA 2KBKA 4CQKA 2KYQA 2YBRC 1BRZA 1SN4A 1AYJA 1LQIA 2N66A 3E7UX 1I6GA 1I6FA 2LJMA 1KV0A 1DJTA 1LQHA 2NY8X 4V1DC 1NE5A 1ZU3A 2ATBA 2N2QA 1ICAA 3PSMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P00 A;  1I2V A;  1JZB A;  2KJA A;  1ZYV A;  2LKB A;  1DQ7 A;  2BRZ A;  2KSK A;  2M8B B;  1NPI A;  2LI7 A;  2SN3 A;  1PX9 A;  2N69 A;  1JXC A;  1FH3 A;  1OZZ A;  1ZFU A;  1CHZ A;  1BMR A;  1PE4 A;  1C56 A;  2YC1 C;  1T0Z A;  1SEG A;  2B3C A;  2N2R A;  4HHF A;  1BK8 A;  2I61 A;  2LT8 A;  2KPY A;  1AHO A;  2LY6 A;  1ZVG A;  1C55 A;  2ASC A;  2GL1 A;  2LR3 A;  1SN1 A;  2E3F A;  2A7T A;  1NH5 A;  4AAZ A;  4AB0 A;  1I2U A;  1T7B A;  1P0A A;  1WT7 A;  1BCG A;  1GPT A;  1GPS A;  1JZA A;  5KK4 A;  3E7R L;  1SNB A;  1VNA A;  1MR4 A;  1LQQ A;  1WMT A;  1ZYW A;  1NRB A;  1CN2 A;  2LJ7 A;  4KYP A;  5CY0 A;  1WWN A;  1B3C A;  4HE7 A;  2E3G A;  1T7A A;  1T1T A;  1ZVE A;  1B7D A;  2KBH A;  2LY5 A;  1ZUT A;  1JKZ A;  4UJ0 A;  2MZ0 A;  1L4V A;  1TI5 A;  1NRA A;  1MYN A;  2E0H A;  2B68 A;  1N4N A;  1T7E A;  2NY9 X;  1VNB A;  1PTX A;  2KBJ A;  2KGQ A;  1OMY A;  2YEO A;  4AEI A;  2KBK A;  4CQK A;  2KYQ A;  2YBR C;  1BRZ A;  1SN4 A;  1AYJ A;  1LQI A;  2N66 A;  3E7U X;  1I6G A;  1I6F A;  2LJM A;  1KV0 A;  1DJT A;  1LQH A;  2NY8 X;  4V1D C;  1NE5 A;  1ZU3 A;  2ATB A;  2N2Q A;  1ICA A;  3PSM A; 
#chains in the Genus database with same CATH topology
 1P00 A;  1I2V A;  2QWP A;  1JZB A;  2KJA A;  1ZYV A;  5AQK A;  3FZH A;  2E2F A;  2LKB A;  3QI7 A;  1DQ7 A;  3LDO A;  4FL9 A;  3L56 A;  5AQR A;  2BRZ A;  5AQS A;  2KSK A;  2M8B B;  1NPI A;  2LI7 A;  2SN3 A;  1PX9 A;  2N69 A;  1JXC A;  1HJO A;  2YIO A;  4UAD E;  3C7N B;  2D56 A;  2QWM A;  5BPM A;  1NGG A;  1FH3 A;  5EVZ A;  1OZZ A;  5AQN A;  2MBK A;  3FZK A;  1ZFU A;  1KAZ A;  3QFP A;  1CHZ A;  5BPN A;  3AY9 A;  5F1X A;  1BMR A;  1PE4 A;  1C56 A;  5AQZ A;  5F0X A;  3L6Q A;  2YC1 C;  2YIL A;  2QWN A;  3KP0 A;  4H5T A;  1NGH A;  2GMO A;  2K35 A;  1T0Z A;  5AQM A;  1SEG A;  4H5V A;  2B3C A;  2N2R A;  4HHF A;  4HWI A;  1BK8 A;  2I61 A;  3D2F B;  2G2K A;  2KPY A;  2LT8 A;  2QXL A;  1NGE A;  1NGF A;  1QQO A;  5AQW A;  2KHO A;  2MN5 A;  5BN8 A;  1AHO A;  2LY6 A;  1S3X A;  5AQU A;  1ZVG A;  5BN9 A;  1C55 A;  2ASC A;  1NGJ A;  2GL1 A;  2LR3 A;  3IUC A;  5FPD A;  1POI A;  1SN1 A;  2E3F A;  5AQT A;  2E88 A;  2A7T A;  1NH5 A;  4AAZ A;  5AQV A;  4AB0 A;  1I2U A;  1T7B A;  5AQX A;  1P0A A;  1WT7 A;  1BCG A;  3C7N A;  3JXU A;  3LDP A;  3KOZ A;  3QFU A;  5AQO A;  2QWR A;  1GPT A;  1GPS A;  1K8B A;  3LDQ A;  3FZL A;  1JZA A;  3M3Z A;  5KK4 A;  1NGD A;  4H5N A;  5EXW A;  3E7R L;  5AQH A;  1SNB A;  1VNA A;  1ICA A;  4FSV A;  1KAY A;  1MR4 A;  1LQQ A;  5AQJ A;  1WMT A;  1ZYW A;  3KHW A;  1BA1 A;  1HX1 A;  4UAF E;  1XRS B;  1NRB A;  1QQN A;  2E8A A;  3QML A;  5BPL A;  5AQI A;  3GDQ A;  1HPM A;  1CN2 A;  3D2F A;  5EX5 A;  2LJ7 A;  4KYP A;  1NGC A;  1ATS A;  1BA0 A;  1WWN A;  5CY0 A;  5FPE A;  1B3C A;  3FE1 A;  1ATR A;  2V7Z A;  4HE7 A;  2E3G A;  1T7A A;  1BUP A;  3CW4 A;  1NGI A;  1T1T A;  1ZVE A;  1DKG D;  1B7D A;  2KBH A;  2QWO A;  3KOX A;  3BK3 C;  1NGB A;  2QW9 A;  3LDL A;  2BUP A;  5FPM A;  2LY5 A;  1ZUT A;  4KBO A;  5AQQ A;  2VY6 A;  1JKZ A;  4UJ0 A;  3I33 A;  5FPN A;  2MZ0 A;  3ATV A;  1TI5 A;  1L4V A;  1NRA A;  1MYN A;  2E0H A;  3HSC A;  2B68 A;  3CQX A;  3KOY A;  3A8Y A;  4UAE F;  1N4N A;  1T7E A;  2LN8 A;  1QQM A;  2NY9 X;  5AR0 A;  5EY4 A;  3ATU A;  1KAX A;  3FZF A;  2JDQ D;  5AQL A;  1VNB A;  1PTX A;  2KBJ A;  5AQP A;  2KGQ A;  1OMY A;  1YUW A;  3KP1 A;  4IO8 A;  3L4I A;  2YEO A;  4AEI A;  2KBK A;  3KOW A;  2YIP A;  2KYQ A;  4GNI A;  2YBR C;  4H5R A;  4CQK A;  3R2V A;  5AQF A;  3SF4 D;  2QWQ A;  5AQG A;  1BRZ A;  3LDN A;  1SN4 A;  1AYJ A;  1LQI A;  4H5W A;  2N66 A;  3GKU A;  3E7U X;  3D2E B;  1I6G A;  1I6F A;  2LJM A;  1KV0 A;  1DJT A;  3D2E A;  2QWL A;  3GL1 A;  1LQH A;  2NY8 X;  4V1D C;  5F2R A;  1NGA A;  1NE5 A;  1ZU3 A;  2ATB A;  3FZM A;  2N2Q A;  5AQY A;  3KC6 A;  3KVG A;  1UGL A;  3PSM A; 
#chains in the Genus database with same CATH homology
 1P00 A;  1I2V A;  1JZB A;  2KJA A;  1ZYV A;  2LKB A;  1DQ7 A;  2BRZ A;  2KSK A;  2M8B B;  1NPI A;  2LI7 A;  2SN3 A;  1PX9 A;  2N69 A;  1JXC A;  1FH3 A;  1OZZ A;  1ZFU A;  1CHZ A;  1BMR A;  1PE4 A;  1C56 A;  2YC1 C;  1T0Z A;  1SEG A;  2B3C A;  2N2R A;  4HHF A;  1BK8 A;  2I61 A;  2LT8 A;  2KPY A;  1AHO A;  2LY6 A;  1ZVG A;  1C55 A;  2ASC A;  2GL1 A;  2LR3 A;  1SN1 A;  2E3F A;  2A7T A;  1NH5 A;  4AAZ A;  4AB0 A;  1I2U A;  1T7B A;  1P0A A;  1WT7 A;  1BCG A;  1GPT A;  1GPS A;  1JZA A;  5KK4 A;  3E7R L;  1SNB A;  1VNA A;  1MR4 A;  1LQQ A;  1WMT A;  1ZYW A;  1NRB A;  1CN2 A;  2LJ7 A;  4KYP A;  5CY0 A;  1WWN A;  1B3C A;  4HE7 A;  2E3G A;  1T7A A;  1T1T A;  1ZVE A;  1B7D A;  2KBH A;  2LY5 A;  1ZUT A;  1JKZ A;  4UJ0 A;  2MZ0 A;  1L4V A;  1TI5 A;  1NRA A;  1MYN A;  2E0H A;  2B68 A;  1N4N A;  1T7E A;  2NY9 X;  1VNB A;  1PTX A;  2KBJ A;  2KGQ A;  1OMY A;  2YEO A;  4AEI A;  2KBK A;  4CQK A;  2KYQ A;  2YBR C;  1BRZ A;  1SN4 A;  1AYJ A;  1LQI A;  2N66 A;  3E7U X;  1I6G A;  1I6F A;  2LJM A;  1KV0 A;  1DJT A;  1LQH A;  2NY8 X;  4V1D C;  1NE5 A;  1ZU3 A;  2ATB A;  2N2Q A;  1ICA A;  3PSM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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