2B3CA

Solution structure of a beta-neurotoxin from the new world scorpion centruroides sculpturatus ewing
Total Genus 10
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
64
structure length
64
Chain Sequence
KDGYLVEKTGCKKTCYKLGENDFCNRECKWKHIGGSYGYCYGFGCYCEGLPDSTQTWPLPNKTC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Toxin
molecule keywords PROTEIN (NEUROTOXIN CSE-I)
publication title Solution structure of a beta-neurotoxin from the New World scorpion Centruroides sculpturatus Ewing.
pubmed doi rcsb
total genus 10
structure length 64
sequence length 64
ec nomenclature
pdb deposition date 1998-12-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2b3cA00
1ZUTA 4AEIA 4CQKA 2YC1C 2N2RA 1WT7A 1B3CA 2I61A 2KSKA 1T7EA 1C55A 1JKZA 2KBHA 1ZU3A 1WWNA 2LY6A 2M8BB 1NPIA 2KPYA 1LQQA 2LKBA 1NRAA 2A7TA 1BCGA 2NY8X 2ATBA 1NH5A 1NE5A 1MR4A 2B68A 2E3FA 2LR3A 2NY9X 1GPTA 1LQHA 4KYPA 2N66A 1ZYWA 2N69A 1ZVGA 4V1DC 1T7AA 1I2VA 4AAZA 1GPSA 1SN1A 4AB0A 2N2QA 2KJAA 1AYJA 1DQ7A 1OZZA 1I6FA 1CHZA 4HE7A 3E7UX 1L4VA 2KBJA 1ZVEA 2YBRC 1WMTA 5CY0A 2KYQA 1SN4A 1ZFUA 2SN3A 1T7BA 2E0HA 1BMRA 1MYNA 1NRBA 1SEGA 1JXCA 2B3CA 2LJMA 1ICAA 4UJ0A 3PSMA 1B7DA 1P0AA 1DJTA 1SNBA 2E3GA 1C56A 2KGQA 1T0ZA 1P00A 1KV0A 1OMYA 2KBKA 1BK8A 1T1TA 5KK4A 1N4NA 1TI5A 1BRZA 1I6GA 2GL1A 2BRZA 1LQIA 2LY5A 1JZAA 1VNBA 1PX9A 3E7RL 1AHOA 1VNAA 4HHFA 2YEOA 1I2UA 1CN2A 1ZYVA 2MZ0A 1PE4A 2LI7A 1PTXA 1FH3A 2LJ7A 1JZBA 2LT8A 2ASCA
chains in the Genus database with same CATH superfamily
3HSCA 1ZUTA 5BPMA 4AEIA 3LDOA 2QWLA 5AR0A 1DKGD 2YIPA 4CQKA 2YC1C 2N2RA 4FL9A 5EY4A 5BN9A 3KC6A 1QQNA 1WT7A 3SF4D 4H5WA 2QWMA 3KOWA 1B3CA 3FZLA 5F2RA 1BA0A 4KBOA 3KOYA 3L56A 3D2EB 2I61A 2KSKA 3GKUA 1HJOA 1T7EA 5AQJA 5AQOA 1C55A 5AQLA 1JKZA 2KBHA 3M3ZA 1ZU3A 1NGGA 3KOZA 1WWNA 1KAZA 1NGIA 2LY6A 2M8BB 2QWPA 1POIA 2YIOA 3D2EA 5AQKA 1NPIA 5AQNA 2QWRA 2KPYA 1LQQA 2QW9A 5AQZA 2LKBA 1NRAA 5FPMA 3KOXA 2A7TA 1BCGA 1ATRA 2NY8X 3GL1A 5AQVA 3QFUA 4UADE 1NH5A 1NGEA 2ATBA 1NE5A 3FZFA 2K35A 1MR4A 5AQPA 1BUPA 2B68A 2E3FA 1ATSA 3FZKA 2MBKA 2E2FA 2GMOA 3FE1A 1NGHA 1K8BA 2LR3A 1NGCA 5FPDA 3LDNA 3FZHA 4UAFE 2NY9X 5AQXA 5FPEA 1GPTA 1LQHA 4IO8A 2MN5A 2KHOA 1NGFA 1NGAA 1KAXA 1NGJA 3IUCA 4KYPA 5AQFA 2JDQD 2N66A 3A8YA 3QMLA 4FSVA 3LDPA 1ZYWA 5AQGA 2N69A 1ZVGA 2QXLA 2LN8A 3ATUA 3L4IA 4V1DC 1HPMA 1T7AA 5AQRA 1I2VA 3FZMA 2E88A 5AQSA 4AAZA 1GPSA 1SN1A 3R2VA 4AB0A 5BN8A 3C7NB 2N2QA 4H5TA 2KJAA 3LDQA 5AQQA 1AYJA 4GNIA 1DQ7A 2QWNA 5FPNA 2QWQA 3KP0A 1OZZA 5AQIA 1I6FA 1CHZA 3JXUA 3AY9A 5F1XA 4HE7A 3E7UX 1L4VA 2KBJA 3C7NA 1XRSB 1ZVEA 2YBRC 4UAEF 3L6QA 1WMTA 5CY0A 2KYQA 1NGBA 5EXWA 1SN4A 1YUWA 1ZFUA 2SN3A 1T7BA 5AQYA 2E0HA 1BA1A 1MYNA 1BMRA 3LDLA 1NRBA 1SEGA 1QQOA 1JXCA 2B3CA 2LJMA 3D2FB 1ICAA 3BK3C 4UJ0A 3PSMA 1B7DA 1P0AA 1DJTA 2QWOA 1SNBA 2YILA 3QI7A 2E3GA 1C56A 3CQXA 2KGQA 3CW4A 1T0ZA 1P00A 5AQUA 3D2FA 1KV0A 1OMYA 2D56A 2KBKA 2BUPA 1T1TA 1S3XA 5AQHA 5F0XA 1BK8A 5KK4A 1N4NA 1TI5A 1BRZA 1I6GA 5AQMA 1UGLA 2GL1A 5EVZA 2BRZA 2V7ZA 1LQIA 2LY5A 3KP1A 1JZAA 1VNBA 1PX9A 5BPNA 3E7RL 2VY6A 1AHOA 1VNAA 4H5NA 3I33A 2G2KA 4H5RA 3KVGA 4H5VA 4HHFA 5EX5A 3ATVA 2YEOA 1KAYA 1I2UA 3GDQA 2E8AA 1CN2A 1NGDA 1ZYVA 2MZ0A 1PE4A 2LI7A 3KHWA 5BPLA 1PTXA 1FH3A 1QQMA 2LJ7A 1JZBA 1HX1A 5AQWA 2LT8A 4HWIA 2ASCA 5AQTA 3QFPA
chains in the Genus database with same CATH topology
1ZUTA 4AEIA 4CQKA 2YC1C 2N2RA 1WT7A 1B3CA 2I61A 2KSKA 1T7EA 1C55A 1JKZA 2KBHA 1ZU3A 1WWNA 2LY6A 2M8BB 1NPIA 2KPYA 1LQQA 2LKBA 1NRAA 2A7TA 1BCGA 2NY8X 2ATBA 1NH5A 1NE5A 1MR4A 2B68A 2E3FA 2LR3A 2NY9X 1GPTA 1LQHA 4KYPA 2N66A 1ZYWA 2N69A 1ZVGA 4V1DC 1T7AA 1I2VA 4AAZA 1GPSA 1SN1A 4AB0A 2N2QA 2KJAA 1AYJA 1DQ7A 1OZZA 1I6FA 1CHZA 4HE7A 3E7UX 1L4VA 2KBJA 1ZVEA 2YBRC 1WMTA 5CY0A 2KYQA 1SN4A 1ZFUA 2SN3A 1T7BA 2E0HA 1BMRA 1MYNA 1NRBA 1SEGA 1JXCA 2B3CA 2LJMA 1ICAA 4UJ0A 3PSMA 1B7DA 1P0AA 1DJTA 1SNBA 2E3GA 1C56A 2KGQA 1T0ZA 1P00A 1KV0A 1OMYA 2KBKA 1BK8A 1T1TA 5KK4A 1N4NA 1TI5A 1BRZA 1I6GA 2GL1A 2BRZA 1LQIA 2LY5A 1JZAA 1VNBA 1PX9A 3E7RL 1AHOA 1VNAA 4HHFA 2YEOA 1I2UA 1CN2A 1ZYVA 2MZ0A 1PE4A 2LI7A 1PTXA 1FH3A 2LJ7A 1JZBA 2LT8A 2ASCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZUT A;  4AEI A;  4CQK A;  2YC1 C;  2N2R A;  1WT7 A;  1B3C A;  2I61 A;  2KSK A;  1T7E A;  1C55 A;  1JKZ A;  2KBH A;  1ZU3 A;  1WWN A;  2LY6 A;  2M8B B;  1NPI A;  2KPY A;  1LQQ A;  2LKB A;  1NRA A;  2A7T A;  1BCG A;  2NY8 X;  2ATB A;  1NH5 A;  1NE5 A;  1MR4 A;  2B68 A;  2E3F A;  2LR3 A;  2NY9 X;  1GPT A;  1LQH A;  4KYP A;  2N66 A;  1ZYW A;  2N69 A;  1ZVG A;  4V1D C;  1T7A A;  1I2V A;  4AAZ A;  1GPS A;  1SN1 A;  4AB0 A;  2N2Q A;  2KJA A;  1AYJ A;  1DQ7 A;  1OZZ A;  1I6F A;  1CHZ A;  4HE7 A;  3E7U X;  1L4V A;  2KBJ A;  1ZVE A;  2YBR C;  1WMT A;  5CY0 A;  2KYQ A;  1SN4 A;  1ZFU A;  2SN3 A;  1T7B A;  2E0H A;  1BMR A;  1MYN A;  1NRB A;  1SEG A;  1JXC A;  2B3C A;  2LJM A;  1ICA A;  4UJ0 A;  3PSM A;  1B7D A;  1P0A A;  1DJT A;  1SNB A;  2E3G A;  1C56 A;  2KGQ A;  1T0Z A;  1P00 A;  1KV0 A;  1OMY A;  2KBK A;  1BK8 A;  1T1T A;  5KK4 A;  1N4N A;  1TI5 A;  1BRZ A;  1I6G A;  2GL1 A;  2BRZ A;  1LQI A;  2LY5 A;  1JZA A;  1VNB A;  1PX9 A;  3E7R L;  1AHO A;  1VNA A;  4HHF A;  2YEO A;  1I2U A;  1CN2 A;  1ZYV A;  2MZ0 A;  1PE4 A;  2LI7 A;  1PTX A;  1FH3 A;  2LJ7 A;  1JZB A;  2LT8 A;  2ASC A; 
#chains in the Genus database with same CATH topology
 3HSC A;  1ZUT A;  5BPM A;  4AEI A;  3LDO A;  2QWL A;  5AR0 A;  1DKG D;  2YIP A;  4CQK A;  2YC1 C;  2N2R A;  4FL9 A;  5EY4 A;  5BN9 A;  3KC6 A;  1QQN A;  1WT7 A;  3SF4 D;  4H5W A;  2QWM A;  3KOW A;  1B3C A;  3FZL A;  5F2R A;  1BA0 A;  4KBO A;  3KOY A;  3L56 A;  3D2E B;  2I61 A;  2KSK A;  3GKU A;  1HJO A;  1T7E A;  5AQJ A;  5AQO A;  1C55 A;  5AQL A;  1JKZ A;  2KBH A;  3M3Z A;  1ZU3 A;  1NGG A;  3KOZ A;  1WWN A;  1KAZ A;  1NGI A;  2LY6 A;  2M8B B;  2QWP A;  1POI A;  2YIO A;  3D2E A;  5AQK A;  1NPI A;  5AQN A;  2QWR A;  2KPY A;  1LQQ A;  2QW9 A;  5AQZ A;  2LKB A;  1NRA A;  5FPM A;  3KOX A;  2A7T A;  1BCG A;  1ATR A;  2NY8 X;  3GL1 A;  5AQV A;  3QFU A;  4UAD E;  1NH5 A;  1NGE A;  2ATB A;  1NE5 A;  3FZF A;  2K35 A;  1MR4 A;  5AQP A;  1BUP A;  2B68 A;  2E3F A;  1ATS A;  3FZK A;  2MBK A;  2E2F A;  2GMO A;  3FE1 A;  1NGH A;  1K8B A;  2LR3 A;  1NGC A;  5FPD A;  3LDN A;  3FZH A;  4UAF E;  2NY9 X;  5AQX A;  5FPE A;  1GPT A;  1LQH A;  4IO8 A;  2MN5 A;  2KHO A;  1NGF A;  1NGA A;  1KAX A;  1NGJ A;  3IUC A;  4KYP A;  5AQF A;  2JDQ D;  2N66 A;  3A8Y A;  3QML A;  4FSV A;  3LDP A;  1ZYW A;  5AQG A;  2N69 A;  1ZVG A;  2QXL A;  2LN8 A;  3ATU A;  3L4I A;  4V1D C;  1HPM A;  1T7A A;  5AQR A;  1I2V A;  3FZM A;  2E88 A;  5AQS A;  4AAZ A;  1GPS A;  1SN1 A;  3R2V A;  4AB0 A;  5BN8 A;  3C7N B;  2N2Q A;  4H5T A;  2KJA A;  3LDQ A;  5AQQ A;  1AYJ A;  4GNI A;  1DQ7 A;  2QWN A;  5FPN A;  2QWQ A;  3KP0 A;  1OZZ A;  5AQI A;  1I6F A;  1CHZ A;  3JXU A;  3AY9 A;  5F1X A;  4HE7 A;  3E7U X;  1L4V A;  2KBJ A;  3C7N A;  1XRS B;  1ZVE A;  2YBR C;  4UAE F;  3L6Q A;  1WMT A;  5CY0 A;  2KYQ A;  1NGB A;  5EXW A;  1SN4 A;  1YUW A;  1ZFU A;  2SN3 A;  1T7B A;  5AQY A;  2E0H A;  1BA1 A;  1MYN A;  1BMR A;  3LDL A;  1NRB A;  1SEG A;  1QQO A;  1JXC A;  2B3C A;  2LJM A;  3D2F B;  1ICA A;  3BK3 C;  4UJ0 A;  3PSM A;  1B7D A;  1P0A A;  1DJT A;  2QWO A;  1SNB A;  2YIL A;  3QI7 A;  2E3G A;  1C56 A;  3CQX A;  2KGQ A;  3CW4 A;  1T0Z A;  1P00 A;  5AQU A;  3D2F A;  1KV0 A;  1OMY A;  2D56 A;  2KBK A;  2BUP A;  1T1T A;  1S3X A;  5AQH A;  5F0X A;  1BK8 A;  5KK4 A;  1N4N A;  1TI5 A;  1BRZ A;  1I6G A;  5AQM A;  1UGL A;  2GL1 A;  5EVZ A;  2BRZ A;  2V7Z A;  1LQI A;  2LY5 A;  3KP1 A;  1JZA A;  1VNB A;  1PX9 A;  5BPN A;  3E7R L;  2VY6 A;  1AHO A;  1VNA A;  4H5N A;  3I33 A;  2G2K A;  4H5R A;  3KVG A;  4H5V A;  4HHF A;  5EX5 A;  3ATV A;  2YEO A;  1KAY A;  1I2U A;  3GDQ A;  2E8A A;  1CN2 A;  1NGD A;  1ZYV A;  2MZ0 A;  1PE4 A;  2LI7 A;  3KHW A;  5BPL A;  1PTX A;  1FH3 A;  1QQM A;  2LJ7 A;  1JZB A;  1HX1 A;  5AQW A;  2LT8 A;  4HWI A;  2ASC A;  5AQT A;  3QFP A; 
#chains in the Genus database with same CATH homology
 1ZUT A;  4AEI A;  4CQK A;  2YC1 C;  2N2R A;  1WT7 A;  1B3C A;  2I61 A;  2KSK A;  1T7E A;  1C55 A;  1JKZ A;  2KBH A;  1ZU3 A;  1WWN A;  2LY6 A;  2M8B B;  1NPI A;  2KPY A;  1LQQ A;  2LKB A;  1NRA A;  2A7T A;  1BCG A;  2NY8 X;  2ATB A;  1NH5 A;  1NE5 A;  1MR4 A;  2B68 A;  2E3F A;  2LR3 A;  2NY9 X;  1GPT A;  1LQH A;  4KYP A;  2N66 A;  1ZYW A;  2N69 A;  1ZVG A;  4V1D C;  1T7A A;  1I2V A;  4AAZ A;  1GPS A;  1SN1 A;  4AB0 A;  2N2Q A;  2KJA A;  1AYJ A;  1DQ7 A;  1OZZ A;  1I6F A;  1CHZ A;  4HE7 A;  3E7U X;  1L4V A;  2KBJ A;  1ZVE A;  2YBR C;  1WMT A;  5CY0 A;  2KYQ A;  1SN4 A;  1ZFU A;  2SN3 A;  1T7B A;  2E0H A;  1BMR A;  1MYN A;  1NRB A;  1SEG A;  1JXC A;  2B3C A;  2LJM A;  1ICA A;  4UJ0 A;  3PSM A;  1B7D A;  1P0A A;  1DJT A;  1SNB A;  2E3G A;  1C56 A;  2KGQ A;  1T0Z A;  1P00 A;  1KV0 A;  1OMY A;  2KBK A;  1BK8 A;  1T1T A;  5KK4 A;  1N4N A;  1TI5 A;  1BRZ A;  1I6G A;  2GL1 A;  2BRZ A;  1LQI A;  2LY5 A;  1JZA A;  1VNB A;  1PX9 A;  3E7R L;  1AHO A;  1VNA A;  4HHF A;  2YEO A;  1I2U A;  1CN2 A;  1ZYV A;  2MZ0 A;  1PE4 A;  2LI7 A;  1PTX A;  1FH3 A;  2LJ7 A;  1JZB A;  2LT8 A;  2ASC A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...