2N69A

Nmr structure of non-sweet mutant (ins18ri19) of sweet protein brazzein
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
56
structure length
56
Chain Sequence
QDKCKKVYENYPVSKCQLRIANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Plant protein
molecule keywords Defensin-like protein
publication title NMR Structure of sweeter mutant of sweet protein Brazzein
rcsb
source organism Pentadiplandra brazzeana
total genus 6
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 2015-08-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2n69A00
1ZYVA 1NPIA 2E3FA 4V1DC 1GPTA 1NRAA 1I6GA 1CHZA 1T7AA 2LY6A 1P00A 1LQQA 1C55A 1JXCA 3E7RL 2LT8A 2NY8X 1PE4A 4HE7A 1SEGA 2KGQA 2A7TA 2LJ7A 1T1TA 1FH3A 1OZZA 2N66A 4HHFA 2MZ0A 2LKBA 1P0AA 1VNBA 1GPSA 1MYNA 1NH5A 1PTXA 1VNAA 2KBJA 1I6FA 1I2VA 1WMTA 2N2RA 4AEIA 1ZFUA 1BK8A 2LY5A 4UJ0A 1AYJA 1SN1A 1WT7A 2LR3A 2KSKA 2SN3A 4CQKA 1AHOA 2KBKA 1T7EA 1KV0A 2ASCA 2LJMA 2N2QA 1SNBA 2YEOA 1N4NA 1ZYWA 1SN4A 2LI7A 1JZBA 1ZVGA 1T7BA 1ZUTA 5KK4A 1ZU3A 1DQ7A 2E0HA 2M8BB 4AB0A 1TI5A 1MR4A 1ICAA 2E3GA 4AAZA 1NE5A 2BRZA 1DJTA 2N69A 1PX9A 1NRBA 1WWNA 2ATBA 2KPYA 2YC1C 1C56A 1BMRA 1JZAA 2GL1A 1LQHA 1CN2A 1L4VA 1LQIA 1OMYA 1T0ZA 2KBHA 2KJAA 1B7DA 5CY0A 1I2UA 2KYQA 1B3CA 2YBRC 3E7UX 4KYPA 1BCGA 1ZVEA 2B3CA 2I61A 2B68A 3PSMA 2NY9X 1BRZA 1JKZA
chains in the Genus database with same CATH superfamily
1ZYVA 1NPIA 2E3FA 4V1DC 5F0XA 1NRAA 5EVZA 1GPTA 1I6GA 1CHZA 5AQJA 1T7AA 5BPMA 3CW4A 3L56A 2LY6A 5EXWA 1P00A 1LQQA 4KBOA 2GMOA 1C55A 2K35A 3LDOA 1JXCA 2QWOA 2LT8A 2NY8X 3E7RL 1PE4A 1NGEA 1S3XA 4HE7A 1SEGA 4UAFE 2KGQA 5AQZA 3QFPA 1DKGD 5AQXA 1POIA 5FPDA 2A7TA 5AR0A 2LJ7A 1ATSA 1QQOA 3QI7A 5BN9A 5FPEA 5AQTA 1T1TA 3BK3C 3LDQA 5AQIA 1FH3A 1OZZA 2N66A 4H5VA 4H5NA 4HHFA 3LDPA 5AQNA 5FPMA 2MZ0A 2LKBA 1P0AA 1VNBA 1GPSA 1YUWA 1MYNA 1NH5A 2QW9A 5F2RA 2QWLA 3KVGA 1PTXA 1VNAA 2E88A 1K8BA 3KOXA 4UADE 2KBJA 3LDLA 3LDNA 1I6FA 1I2VA 1WMTA 2QWMA 5AQLA 2N2RA 4AEIA 1ZFUA 1NGGA 3SF4D 3GKUA 5BN8A 3I33A 1QQMA 1BK8A 2LY5A 2D56A 3FZKA 5KK4A 1BA0A 4UJ0A 2QXLA 1KAXA 5AQWA 1AYJA 1SN1A 4GNIA 1WT7A 2LR3A 1NGDA 5F1XA 2KSKA 1UGLA 2SN3A 1NGIA 4CQKA 5AQYA 1AHOA 3KC6A 1NGHA 5AQVA 2V7ZA 4H5RA 4H5WA 2KBKA 3D2FA 3FZMA 1NGAA 3FZFA 1T7EA 3KP0A 4HWIA 1KV0A 3C7NA 2ASCA 2LJMA 2MN5A 1SNBA 2N2QA 1NGBA 1HPMA 2YEOA 3ATUA 3AY9A 3HSCA 4H5TA 5AQFA 1QQNA 1NGFA 3A8YA 1N4NA 1ZYWA 3JXUA 3L6QA 1SN4A 2LI7A 2E8AA 1JZBA 1ZVGA 3D2EA 1T7BA 5AQPA 5EX5A 1ZUTA 4IO8A 5BPNA 2YIOA 3L4IA 3KOYA 1ZU3A 1DQ7A 2E0HA 2M8BB 3GDQA 5AQRA 1TI5A 1KAZA 1MR4A 5AQKA 5FPNA 4AB0A 1ICAA 2E3GA 4AAZA 1NE5A 2BRZA 2YILA 5AQOA 3KOZA 3GL1A 1DJTA 2N69A 2QWNA 1PX9A 1BUPA 1NRBA 1WWNA 2ATBA 1NGCA 2JDQD 2KPYA 2LN8A 2YC1C 1C56A 3D2FB 1BMRA 2QWPA 1HJOA 2G2KA 3C7NB 2MBKA 1JZAA 2GL1A 1KAYA 3IUCA 5AQQA 1HX1A 2QWQA 3M3ZA 4FSVA 5AQHA 1LQHA 1CN2A 2QWRA 3ATVA 3KHWA 1L4VA 1LQIA 2KHOA 1OMYA 1XRSB 2YIPA 2E2FA 1T0ZA 4UAEF 2KBHA 3D2EB 2KJAA 1B7DA 3QMLA 3FE1A 2BUPA 1BA1A 1ATRA 2KYQA 5CY0A 1I2UA 3KOWA 4FL9A 1B3CA 2YBRC 3E7UX 3KP1A 5BPLA 1NGJA 4KYPA 5AQUA 5EY4A 3FZLA 2VY6A 3R2VA 1BCGA 1ZVEA 2B3CA 2I61A 3CQXA 2B68A 5AQMA 3PSMA 5AQSA 2NY9X 1BRZA 1JKZA 5AQGA 3FZHA 3QFUA
chains in the Genus database with same CATH topology
1ZYVA 1NPIA 2E3FA 4V1DC 1GPTA 1NRAA 1I6GA 1CHZA 1T7AA 2LY6A 1P00A 1LQQA 1C55A 1JXCA 3E7RL 2LT8A 2NY8X 1PE4A 4HE7A 1SEGA 2KGQA 2A7TA 2LJ7A 1T1TA 1FH3A 1OZZA 2N66A 4HHFA 2MZ0A 2LKBA 1P0AA 1VNBA 1GPSA 1MYNA 1NH5A 1PTXA 1VNAA 2KBJA 1I6FA 1I2VA 1WMTA 2N2RA 4AEIA 1ZFUA 1BK8A 2LY5A 4UJ0A 1AYJA 1SN1A 1WT7A 2LR3A 2KSKA 2SN3A 4CQKA 1AHOA 2KBKA 1T7EA 1KV0A 2ASCA 2LJMA 2N2QA 1SNBA 2YEOA 1N4NA 1ZYWA 1SN4A 2LI7A 1JZBA 1ZVGA 1T7BA 1ZUTA 5KK4A 1ZU3A 1DQ7A 2E0HA 2M8BB 4AB0A 1TI5A 1MR4A 1ICAA 2E3GA 4AAZA 1NE5A 2BRZA 1DJTA 2N69A 1PX9A 1NRBA 1WWNA 2ATBA 2KPYA 2YC1C 1C56A 1BMRA 1JZAA 2GL1A 1LQHA 1CN2A 1L4VA 1LQIA 1OMYA 1T0ZA 2KBHA 2KJAA 1B7DA 5CY0A 1I2UA 2KYQA 1B3CA 2YBRC 3E7UX 4KYPA 1BCGA 1ZVEA 2B3CA 2I61A 2B68A 3PSMA 2NY9X 1BRZA 1JKZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZYV A;  1NPI A;  2E3F A;  4V1D C;  1GPT A;  1NRA A;  1I6G A;  1CHZ A;  1T7A A;  2LY6 A;  1P00 A;  1LQQ A;  1C55 A;  1JXC A;  3E7R L;  2LT8 A;  2NY8 X;  1PE4 A;  4HE7 A;  1SEG A;  2KGQ A;  2A7T A;  2LJ7 A;  1T1T A;  1FH3 A;  1OZZ A;  2N66 A;  4HHF A;  2MZ0 A;  2LKB A;  1P0A A;  1VNB A;  1GPS A;  1MYN A;  1NH5 A;  1PTX A;  1VNA A;  2KBJ A;  1I6F A;  1I2V A;  1WMT A;  2N2R A;  4AEI A;  1ZFU A;  1BK8 A;  2LY5 A;  4UJ0 A;  1AYJ A;  1SN1 A;  1WT7 A;  2LR3 A;  2KSK A;  2SN3 A;  4CQK A;  1AHO A;  2KBK A;  1T7E A;  1KV0 A;  2ASC A;  2LJM A;  2N2Q A;  1SNB A;  2YEO A;  1N4N A;  1ZYW A;  1SN4 A;  2LI7 A;  1JZB A;  1ZVG A;  1T7B A;  1ZUT A;  5KK4 A;  1ZU3 A;  1DQ7 A;  2E0H A;  2M8B B;  4AB0 A;  1TI5 A;  1MR4 A;  1ICA A;  2E3G A;  4AAZ A;  1NE5 A;  2BRZ A;  1DJT A;  2N69 A;  1PX9 A;  1NRB A;  1WWN A;  2ATB A;  2KPY A;  2YC1 C;  1C56 A;  1BMR A;  1JZA A;  2GL1 A;  1LQH A;  1CN2 A;  1L4V A;  1LQI A;  1OMY A;  1T0Z A;  2KBH A;  2KJA A;  1B7D A;  5CY0 A;  1I2U A;  2KYQ A;  1B3C A;  2YBR C;  3E7U X;  4KYP A;  1BCG A;  1ZVE A;  2B3C A;  2I61 A;  2B68 A;  3PSM A;  2NY9 X;  1BRZ A;  1JKZ A; 
#chains in the Genus database with same CATH topology
 1ZYV A;  1NPI A;  2E3F A;  4V1D C;  5F0X A;  1NRA A;  5EVZ A;  1GPT A;  1I6G A;  1CHZ A;  5AQJ A;  1T7A A;  5BPM A;  3CW4 A;  3L56 A;  2LY6 A;  5EXW A;  1P00 A;  1LQQ A;  4KBO A;  2GMO A;  1C55 A;  2K35 A;  3LDO A;  1JXC A;  2QWO A;  2LT8 A;  2NY8 X;  3E7R L;  1PE4 A;  1NGE A;  1S3X A;  4HE7 A;  1SEG A;  4UAF E;  2KGQ A;  5AQZ A;  3QFP A;  1DKG D;  5AQX A;  1POI A;  5FPD A;  2A7T A;  5AR0 A;  2LJ7 A;  1ATS A;  1QQO A;  3QI7 A;  5BN9 A;  5FPE A;  5AQT A;  1T1T A;  3BK3 C;  3LDQ A;  5AQI A;  1FH3 A;  1OZZ A;  2N66 A;  4H5V A;  4H5N A;  4HHF A;  3LDP A;  5AQN A;  5FPM A;  2MZ0 A;  2LKB A;  1P0A A;  1VNB A;  1GPS A;  1YUW A;  1MYN A;  1NH5 A;  2QW9 A;  5F2R A;  2QWL A;  3KVG A;  1PTX A;  1VNA A;  2E88 A;  1K8B A;  3KOX A;  4UAD E;  2KBJ A;  3LDL A;  3LDN A;  1I6F A;  1I2V A;  1WMT A;  2QWM A;  5AQL A;  2N2R A;  4AEI A;  1ZFU A;  1NGG A;  3SF4 D;  3GKU A;  5BN8 A;  3I33 A;  1QQM A;  1BK8 A;  2LY5 A;  2D56 A;  3FZK A;  5KK4 A;  1BA0 A;  4UJ0 A;  2QXL A;  1KAX A;  5AQW A;  1AYJ A;  1SN1 A;  4GNI A;  1WT7 A;  2LR3 A;  1NGD A;  5F1X A;  2KSK A;  1UGL A;  2SN3 A;  1NGI A;  4CQK A;  5AQY A;  1AHO A;  3KC6 A;  1NGH A;  5AQV A;  2V7Z A;  4H5R A;  4H5W A;  2KBK A;  3D2F A;  3FZM A;  1NGA A;  3FZF A;  1T7E A;  3KP0 A;  4HWI A;  1KV0 A;  3C7N A;  2ASC A;  2LJM A;  2MN5 A;  1SNB A;  2N2Q A;  1NGB A;  1HPM A;  2YEO A;  3ATU A;  3AY9 A;  3HSC A;  4H5T A;  5AQF A;  1QQN A;  1NGF A;  3A8Y A;  1N4N A;  1ZYW A;  3JXU A;  3L6Q A;  1SN4 A;  2LI7 A;  2E8A A;  1JZB A;  1ZVG A;  3D2E A;  1T7B A;  5AQP A;  5EX5 A;  1ZUT A;  4IO8 A;  5BPN A;  2YIO A;  3L4I A;  3KOY A;  1ZU3 A;  1DQ7 A;  2E0H A;  2M8B B;  3GDQ A;  5AQR A;  1TI5 A;  1KAZ A;  1MR4 A;  5AQK A;  5FPN A;  4AB0 A;  1ICA A;  2E3G A;  4AAZ A;  1NE5 A;  2BRZ A;  2YIL A;  5AQO A;  3KOZ A;  3GL1 A;  1DJT A;  2N69 A;  2QWN A;  1PX9 A;  1BUP A;  1NRB A;  1WWN A;  2ATB A;  1NGC A;  2JDQ D;  2KPY A;  2LN8 A;  2YC1 C;  1C56 A;  3D2F B;  1BMR A;  2QWP A;  1HJO A;  2G2K A;  3C7N B;  2MBK A;  1JZA A;  2GL1 A;  1KAY A;  3IUC A;  5AQQ A;  1HX1 A;  2QWQ A;  3M3Z A;  4FSV A;  5AQH A;  1LQH A;  1CN2 A;  2QWR A;  3ATV A;  3KHW A;  1L4V A;  1LQI A;  2KHO A;  1OMY A;  1XRS B;  2YIP A;  2E2F A;  1T0Z A;  4UAE F;  2KBH A;  3D2E B;  2KJA A;  1B7D A;  3QML A;  3FE1 A;  2BUP A;  1BA1 A;  1ATR A;  2KYQ A;  5CY0 A;  1I2U A;  3KOW A;  4FL9 A;  1B3C A;  2YBR C;  3E7U X;  3KP1 A;  5BPL A;  1NGJ A;  4KYP A;  5AQU A;  5EY4 A;  3FZL A;  2VY6 A;  3R2V A;  1BCG A;  1ZVE A;  2B3C A;  2I61 A;  3CQX A;  2B68 A;  5AQM A;  3PSM A;  5AQS A;  2NY9 X;  1BRZ A;  1JKZ A;  5AQG A;  3FZH A;  3QFU A; 
#chains in the Genus database with same CATH homology
 1ZYV A;  1NPI A;  2E3F A;  4V1D C;  1GPT A;  1NRA A;  1I6G A;  1CHZ A;  1T7A A;  2LY6 A;  1P00 A;  1LQQ A;  1C55 A;  1JXC A;  3E7R L;  2LT8 A;  2NY8 X;  1PE4 A;  4HE7 A;  1SEG A;  2KGQ A;  2A7T A;  2LJ7 A;  1T1T A;  1FH3 A;  1OZZ A;  2N66 A;  4HHF A;  2MZ0 A;  2LKB A;  1P0A A;  1VNB A;  1GPS A;  1MYN A;  1NH5 A;  1PTX A;  1VNA A;  2KBJ A;  1I6F A;  1I2V A;  1WMT A;  2N2R A;  4AEI A;  1ZFU A;  1BK8 A;  2LY5 A;  4UJ0 A;  1AYJ A;  1SN1 A;  1WT7 A;  2LR3 A;  2KSK A;  2SN3 A;  4CQK A;  1AHO A;  2KBK A;  1T7E A;  1KV0 A;  2ASC A;  2LJM A;  2N2Q A;  1SNB A;  2YEO A;  1N4N A;  1ZYW A;  1SN4 A;  2LI7 A;  1JZB A;  1ZVG A;  1T7B A;  1ZUT A;  5KK4 A;  1ZU3 A;  1DQ7 A;  2E0H A;  2M8B B;  4AB0 A;  1TI5 A;  1MR4 A;  1ICA A;  2E3G A;  4AAZ A;  1NE5 A;  2BRZ A;  1DJT A;  2N69 A;  1PX9 A;  1NRB A;  1WWN A;  2ATB A;  2KPY A;  2YC1 C;  1C56 A;  1BMR A;  1JZA A;  2GL1 A;  1LQH A;  1CN2 A;  1L4V A;  1LQI A;  1OMY A;  1T0Z A;  2KBH A;  2KJA A;  1B7D A;  5CY0 A;  1I2U A;  2KYQ A;  1B3C A;  2YBR C;  3E7U X;  4KYP A;  1BCG A;  1ZVE A;  2B3C A;  2I61 A;  2B68 A;  3PSM A;  2NY9 X;  1BRZ A;  1JKZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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