2N66A

Nmr structure of sweeter mutant (d40k) of sweet protein brazzein,
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
54
structure length
54
Chain Sequence
QDKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYKEKRNLQCICDYCEY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Plant protein
molecule keywords Defensin-like protein
publication title NMR Structure of sweeter mutant of sweet protein Brazzein
rcsb
source organism Pentadiplandra brazzeana
total genus 8
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 2015-08-13
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2n66A00
2LY5A 2N66A 1WWNA 4AB0A 1WT7A 3E7RL 1VNBA 1OMYA 2NY9X 1LQHA 1I6FA 3PSMA 1I2VA 1T7EA 1NRBA 1NPIA 1TI5A 2KBKA 1JZBA 1P00A 2MZ0A 2I61A 1FH3A 2N69A 4KYPA 1C55A 1JZAA 1OZZA 1PTXA 2KJAA 2LY6A 4AEIA 3E7UX 2LT8A 1BRZA 2LR3A 1T0ZA 1C56A 1SN1A 1ZVGA 2SN3A 1T7BA 1DQ7A 1VNAA 2KYQA 2LI7A 2KBJA 1GPTA 2ATBA 1DJTA 2A7TA 4AAZA 1I6GA 2LJ7A 2NY8X 2M8BB 1ICAA 1ZU3A 1PX9A 1N4NA 1JKZA 1WMTA 1B7DA 2BRZA 1MR4A 2E0HA 1SN4A 2ASCA 1BCGA 1P0AA 1CHZA 1ZVEA 1ZFUA 1I2UA 2YEOA 2KPYA 1AHOA 1L4VA 1LQIA 2LJMA 2YC1C 1T1TA 1LQQA 2GL1A 1ZYVA 1ZYWA 1NRAA 2KSKA 2E3GA 5CY0A 1JXCA 2E3FA 2N2QA 4UJ0A 1B3CA 1SNBA 4CQKA 1NE5A 2KGQA 1KV0A 2N2RA 1PE4A 1T7AA 1NH5A 2LKBA 1ZUTA 4V1DC 1SEGA 1AYJA 4HE7A 4HHFA 5KK4A 1MYNA 1CN2A 2KBHA 1GPSA 1BMRA 2B68A 2YBRC 1BK8A 2B3CA
chains in the Genus database with same CATH superfamily
2YIPA 2LY5A 2N66A 2B3CA 1WWNA 1POIA 1WT7A 2GMOA 1VNBA 2LN8A 3E7RL 4AB0A 3FZHA 1NGDA 2QWQA 1OMYA 4UAFE 2NY9X 3D2EB 2D56A 2MBKA 1LQHA 5AQPA 1I6FA 3PSMA 1I2VA 5AQLA 3LDLA 1T7EA 2E8AA 1BA1A 1NPIA 1KAXA 1NRBA 1TI5A 2KBKA 1JZBA 1P00A 2MZ0A 5FPMA 2I61A 3KOWA 1FH3A 2QWMA 2N69A 1HPMA 5AQTA 4IO8A 4KYPA 5EXWA 1JZAA 5F2RA 1C55A 4HWIA 1OZZA 1PTXA 5AQHA 2KJAA 4UADE 2LY6A 4AEIA 3E7UX 2YIOA 2LT8A 3LDPA 1NGAA 1BRZA 1HJOA 3GL1A 2LR3A 3SF4D 5AQWA 1T0ZA 1C56A 1SN1A 2QWNA 1ZVGA 2VY6A 3BK3C 3D2FA 3L4IA 5AQXA 2SN3A 3FZMA 5AQOA 1NGEA 1BK8A 1T7BA 1DQ7A 1VNAA 2KHOA 3HSCA 2KYQA 2LI7A 3R2VA 2KBJA 1GPTA 2QWLA 2ATBA 1DJTA 2A7TA 2JDQD 4AAZA 5FPDA 3C7NB 3KOZA 1I6GA 5AQNA 3A8YA 2LJ7A 2NY8X 2M8BB 1ICAA 1ZU3A 1PX9A 1N4NA 3GDQA 3JXUA 5AQJA 1JKZA 3QMLA 1WMTA 1B7DA 1NGBA 2BRZA 1NGHA 1MR4A 2E0HA 4KBOA 3CQXA 5F1XA 2ASCA 1BCGA 2QWPA 1KAYA 1P0AA 5EVZA 4H5VA 1CHZA 1QQOA 1NGGA 5BN8A 1ZVEA 1ZFUA 3L56A 1I2UA 1NGFA 2YILA 2YEOA 3IUCA 1YUWA 1ATRA 4H5RA 5BN9A 1DKGD 1K8BA 3KHWA 2KPYA 1AHOA 3GKUA 5BPMA 4H5NA 5FPEA 1L4VA 3M3ZA 1HX1A 4UAEF 2K35A 1ATSA 3FZFA 2V7ZA 1LQIA 1XRSB 5AQFA 2LJMA 2YC1C 1T1TA 3FZKA 3LDOA 2MN5A 2E2FA 3CW4A 2BUPA 1S3XA 1LQQA 3KP0A 1KAZA 2QXLA 5AQRA 1BA0A 1NGIA 2GL1A 1ZYVA 5AQMA 1ZYWA 4GNIA 1NRAA 1NGCA 2KSKA 2E3GA 3D2EA 3D2FB 5AQKA 5CY0A 3QFUA 1JXCA 5AR0A 2E3FA 2N2QA 3LDQA 4UJ0A 5F0XA 2E88A 4FL9A 1B3CA 1SNBA 5BPLA 4CQKA 1QQMA 1QQNA 1NE5A 2KGQA 3QI7A 3KP1A 1KV0A 4FSVA 2QW9A 5FPNA 2N2RA 1PE4A 1T7AA 1BUPA 3KC6A 3ATVA 3LDNA 1NH5A 2LKBA 1ZUTA 3KOXA 3AY9A 1SEGA 4H5WA 3I33A 4V1DC 3KOYA 5EY4A 1UGLA 5EX5A 1AYJA 3FE1A 4HE7A 3KVGA 4HHFA 5AQQA 5KK4A 1MYNA 1CN2A 2G2KA 2KBHA 3L6QA 3QFPA 3ATUA 1NGJA 5AQVA 5AQSA 5AQZA 5AQIA 2QWRA 3FZLA 1GPSA 5BPNA 1BMRA 5AQYA 2B68A 2YBRC 4H5TA 2QWOA 5AQUA 1SN4A 5AQGA 3C7NA
chains in the Genus database with same CATH topology
2LY5A 2N66A 1WWNA 4AB0A 1WT7A 3E7RL 1VNBA 1OMYA 2NY9X 1LQHA 1I6FA 3PSMA 1I2VA 1T7EA 1NRBA 1NPIA 1TI5A 2KBKA 1JZBA 1P00A 2MZ0A 2I61A 1FH3A 2N69A 4KYPA 1C55A 1JZAA 1OZZA 1PTXA 2KJAA 2LY6A 4AEIA 3E7UX 2LT8A 1BRZA 2LR3A 1T0ZA 1C56A 1SN1A 1ZVGA 2SN3A 1T7BA 1DQ7A 1VNAA 2KYQA 2LI7A 2KBJA 1GPTA 2ATBA 1DJTA 2A7TA 4AAZA 1I6GA 2LJ7A 2NY8X 2M8BB 1ICAA 1ZU3A 1PX9A 1N4NA 1JKZA 1WMTA 1B7DA 2BRZA 1MR4A 2E0HA 1SN4A 2ASCA 1BCGA 1P0AA 1CHZA 1ZVEA 1ZFUA 1I2UA 2YEOA 2KPYA 1AHOA 1L4VA 1LQIA 2LJMA 2YC1C 1T1TA 1LQQA 2GL1A 1ZYVA 1ZYWA 1NRAA 2KSKA 2E3GA 5CY0A 1JXCA 2E3FA 2N2QA 4UJ0A 1B3CA 1SNBA 4CQKA 1NE5A 2KGQA 1KV0A 2N2RA 1PE4A 1T7AA 1NH5A 2LKBA 1ZUTA 4V1DC 1SEGA 1AYJA 4HE7A 4HHFA 5KK4A 1MYNA 1CN2A 2KBHA 1GPSA 1BMRA 2B68A 2YBRC 1BK8A 2B3CA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LY5 A;  2N66 A;  1WWN A;  4AB0 A;  1WT7 A;  3E7R L;  1VNB A;  1OMY A;  2NY9 X;  1LQH A;  1I6F A;  3PSM A;  1I2V A;  1T7E A;  1NRB A;  1NPI A;  1TI5 A;  2KBK A;  1JZB A;  1P00 A;  2MZ0 A;  2I61 A;  1FH3 A;  2N69 A;  4KYP A;  1C55 A;  1JZA A;  1OZZ A;  1PTX A;  2KJA A;  2LY6 A;  4AEI A;  3E7U X;  2LT8 A;  1BRZ A;  2LR3 A;  1T0Z A;  1C56 A;  1SN1 A;  1ZVG A;  2SN3 A;  1T7B A;  1DQ7 A;  1VNA A;  2KYQ A;  2LI7 A;  2KBJ A;  1GPT A;  2ATB A;  1DJT A;  2A7T A;  4AAZ A;  1I6G A;  2LJ7 A;  2NY8 X;  2M8B B;  1ICA A;  1ZU3 A;  1PX9 A;  1N4N A;  1JKZ A;  1WMT A;  1B7D A;  2BRZ A;  1MR4 A;  2E0H A;  1SN4 A;  2ASC A;  1BCG A;  1P0A A;  1CHZ A;  1ZVE A;  1ZFU A;  1I2U A;  2YEO A;  2KPY A;  1AHO A;  1L4V A;  1LQI A;  2LJM A;  2YC1 C;  1T1T A;  1LQQ A;  2GL1 A;  1ZYV A;  1ZYW A;  1NRA A;  2KSK A;  2E3G A;  5CY0 A;  1JXC A;  2E3F A;  2N2Q A;  4UJ0 A;  1B3C A;  1SNB A;  4CQK A;  1NE5 A;  2KGQ A;  1KV0 A;  2N2R A;  1PE4 A;  1T7A A;  1NH5 A;  2LKB A;  1ZUT A;  4V1D C;  1SEG A;  1AYJ A;  4HE7 A;  4HHF A;  5KK4 A;  1MYN A;  1CN2 A;  2KBH A;  1GPS A;  1BMR A;  2B68 A;  2YBR C;  1BK8 A;  2B3C A; 
#chains in the Genus database with same CATH topology
 2YIP A;  2LY5 A;  2N66 A;  2B3C A;  1WWN A;  1POI A;  1WT7 A;  2GMO A;  1VNB A;  2LN8 A;  3E7R L;  4AB0 A;  3FZH A;  1NGD A;  2QWQ A;  1OMY A;  4UAF E;  2NY9 X;  3D2E B;  2D56 A;  2MBK A;  1LQH A;  5AQP A;  1I6F A;  3PSM A;  1I2V A;  5AQL A;  3LDL A;  1T7E A;  2E8A A;  1BA1 A;  1NPI A;  1KAX A;  1NRB A;  1TI5 A;  2KBK A;  1JZB A;  1P00 A;  2MZ0 A;  5FPM A;  2I61 A;  3KOW A;  1FH3 A;  2QWM A;  2N69 A;  1HPM A;  5AQT A;  4IO8 A;  4KYP A;  5EXW A;  1JZA A;  5F2R A;  1C55 A;  4HWI A;  1OZZ A;  1PTX A;  5AQH A;  2KJA A;  4UAD E;  2LY6 A;  4AEI A;  3E7U X;  2YIO A;  2LT8 A;  3LDP A;  1NGA A;  1BRZ A;  1HJO A;  3GL1 A;  2LR3 A;  3SF4 D;  5AQW A;  1T0Z A;  1C56 A;  1SN1 A;  2QWN A;  1ZVG A;  2VY6 A;  3BK3 C;  3D2F A;  3L4I A;  5AQX A;  2SN3 A;  3FZM A;  5AQO A;  1NGE A;  1BK8 A;  1T7B A;  1DQ7 A;  1VNA A;  2KHO A;  3HSC A;  2KYQ A;  2LI7 A;  3R2V A;  2KBJ A;  1GPT A;  2QWL A;  2ATB A;  1DJT A;  2A7T A;  2JDQ D;  4AAZ A;  5FPD A;  3C7N B;  3KOZ A;  1I6G A;  5AQN A;  3A8Y A;  2LJ7 A;  2NY8 X;  2M8B B;  1ICA A;  1ZU3 A;  1PX9 A;  1N4N A;  3GDQ A;  3JXU A;  5AQJ A;  1JKZ A;  3QML A;  1WMT A;  1B7D A;  1NGB A;  2BRZ A;  1NGH A;  1MR4 A;  2E0H A;  4KBO A;  3CQX A;  5F1X A;  2ASC A;  1BCG A;  2QWP A;  1KAY A;  1P0A A;  5EVZ A;  4H5V A;  1CHZ A;  1QQO A;  1NGG A;  5BN8 A;  1ZVE A;  1ZFU A;  3L56 A;  1I2U A;  1NGF A;  2YIL A;  2YEO A;  3IUC A;  1YUW A;  1ATR A;  4H5R A;  5BN9 A;  1DKG D;  1K8B A;  3KHW A;  2KPY A;  1AHO A;  3GKU A;  5BPM A;  4H5N A;  5FPE A;  1L4V A;  3M3Z A;  1HX1 A;  4UAE F;  2K35 A;  1ATS A;  3FZF A;  2V7Z A;  1LQI A;  1XRS B;  5AQF A;  2LJM A;  2YC1 C;  1T1T A;  3FZK A;  3LDO A;  2MN5 A;  2E2F A;  3CW4 A;  2BUP A;  1S3X A;  1LQQ A;  3KP0 A;  1KAZ A;  2QXL A;  5AQR A;  1BA0 A;  1NGI A;  2GL1 A;  1ZYV A;  5AQM A;  1ZYW A;  4GNI A;  1NRA A;  1NGC A;  2KSK A;  2E3G A;  3D2E A;  3D2F B;  5AQK A;  5CY0 A;  3QFU A;  1JXC A;  5AR0 A;  2E3F A;  2N2Q A;  3LDQ A;  4UJ0 A;  5F0X A;  2E88 A;  4FL9 A;  1B3C A;  1SNB A;  5BPL A;  4CQK A;  1QQM A;  1QQN A;  1NE5 A;  2KGQ A;  3QI7 A;  3KP1 A;  1KV0 A;  4FSV A;  2QW9 A;  5FPN A;  2N2R A;  1PE4 A;  1T7A A;  1BUP A;  3KC6 A;  3ATV A;  3LDN A;  1NH5 A;  2LKB A;  1ZUT A;  3KOX A;  3AY9 A;  1SEG A;  4H5W A;  3I33 A;  4V1D C;  3KOY A;  5EY4 A;  1UGL A;  5EX5 A;  1AYJ A;  3FE1 A;  4HE7 A;  3KVG A;  4HHF A;  5AQQ A;  5KK4 A;  1MYN A;  1CN2 A;  2G2K A;  2KBH A;  3L6Q A;  3QFP A;  3ATU A;  1NGJ A;  5AQV A;  5AQS A;  5AQZ A;  5AQI A;  2QWR A;  3FZL A;  1GPS A;  5BPN A;  1BMR A;  5AQY A;  2B68 A;  2YBR C;  4H5T A;  2QWO A;  5AQU A;  1SN4 A;  5AQG A;  3C7N A; 
#chains in the Genus database with same CATH homology
 2LY5 A;  2N66 A;  1WWN A;  4AB0 A;  1WT7 A;  3E7R L;  1VNB A;  1OMY A;  2NY9 X;  1LQH A;  1I6F A;  3PSM A;  1I2V A;  1T7E A;  1NRB A;  1NPI A;  1TI5 A;  2KBK A;  1JZB A;  1P00 A;  2MZ0 A;  2I61 A;  1FH3 A;  2N69 A;  4KYP A;  1C55 A;  1JZA A;  1OZZ A;  1PTX A;  2KJA A;  2LY6 A;  4AEI A;  3E7U X;  2LT8 A;  1BRZ A;  2LR3 A;  1T0Z A;  1C56 A;  1SN1 A;  1ZVG A;  2SN3 A;  1T7B A;  1DQ7 A;  1VNA A;  2KYQ A;  2LI7 A;  2KBJ A;  1GPT A;  2ATB A;  1DJT A;  2A7T A;  4AAZ A;  1I6G A;  2LJ7 A;  2NY8 X;  2M8B B;  1ICA A;  1ZU3 A;  1PX9 A;  1N4N A;  1JKZ A;  1WMT A;  1B7D A;  2BRZ A;  1MR4 A;  2E0H A;  1SN4 A;  2ASC A;  1BCG A;  1P0A A;  1CHZ A;  1ZVE A;  1ZFU A;  1I2U A;  2YEO A;  2KPY A;  1AHO A;  1L4V A;  1LQI A;  2LJM A;  2YC1 C;  1T1T A;  1LQQ A;  2GL1 A;  1ZYV A;  1ZYW A;  1NRA A;  2KSK A;  2E3G A;  5CY0 A;  1JXC A;  2E3F A;  2N2Q A;  4UJ0 A;  1B3C A;  1SNB A;  4CQK A;  1NE5 A;  2KGQ A;  1KV0 A;  2N2R A;  1PE4 A;  1T7A A;  1NH5 A;  2LKB A;  1ZUT A;  4V1D C;  1SEG A;  1AYJ A;  4HE7 A;  4HHF A;  5KK4 A;  1MYN A;  1CN2 A;  2KBH A;  1GPS A;  1BMR A;  2B68 A;  2YBR C;  1BK8 A;  2B3C A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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