1T7EA

Crystal structure of mutant pro9ser of scorpion alpha-like neurotoxin bmk m1 from buthus martensii karsch
Total Genus 14
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
66
structure length
66
Chain Sequence
NSVRDAYIAKSHNCVYECARNEYCNDLCTKNGAKSGYCQWVGKYGNGCWCIELPDNVPIRVPGKCH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Toxin
molecule keywords Alpha-like neurotoxin BmK-I
publication title Structural Mechanism Governing Cis and Trans Isomeric States and an Intramolecular Switch for Cis/Trans Isomerization of a Non-proline Peptide Bond Observed in Crystal Structures of Scorpion Toxins
pubmed doi rcsb
source organism Mesobuthus martensii
total genus 14
structure length 66
sequence length 66
ec nomenclature
pdb deposition date 2004-05-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1t7eA00
1GPSA 1T7AA 1ZVGA 2B3CA 1B7DA 1LQHA 2N69A 1ICAA 1VNAA 4KYPA 1C56A 2LR3A 1I2UA 2B68A 1JXCA 4AB0A 1MYNA 2LY5A 1JKZA 1ZYWA 1I6GA 1FH3A 1NRAA 1PE4A 1T0ZA 1BRZA 2GL1A 1NPIA 1TI5A 2E3GA 2LI7A 1GPTA 1DQ7A 4UJ0A 1NH5A 1ZVEA 1SN1A 1PX9A 1AHOA 4HE7A 2MZ0A 2KJAA 1T7EA 1PTXA 2LKBA 1ZUTA 2LT8A 1T1TA 1CN2A 1ZU3A 1N4NA 3E7RL 2LJMA 1LQQA 5KK4A 1C55A 1MR4A 2NY8X 4AAZA 2YEOA 2KYQA 1BMRA 1LQIA 2KGQA 1VNBA 2KBJA 2ATBA 1AYJA 2KSKA 1WMTA 1JZAA 4AEIA 2YC1C 2ASCA 2YBRC 2E3FA 1I2VA 1L4VA 1NRBA 5CY0A 1CHZA 2E0HA 1NE5A 3PSMA 1P00A 1SNBA 1OMYA 2LJ7A 1SEGA 2SN3A 2N66A 2BRZA 1BCGA 1DJTA 4CQKA 1ZFUA 1KV0A 1ZYVA 2N2QA 1JZBA 2KBKA 2LY6A 2I61A 1P0AA 1T7BA 2KPYA 3E7UX 1WWNA 1I6FA 4V1DC 4HHFA 2M8BB 2KBHA 1BK8A 1B3CA 2N2RA 1SN4A 1WT7A 2A7TA 2NY9X 1OZZA
chains in the Genus database with same CATH superfamily
3LDNA 3R2VA 1YUWA 1T7AA 1ZVGA 4HWIA 1GPSA 3AY9A 2B3CA 1B7DA 1LQHA 2N69A 1ICAA 3L56A 2G2KA 5AQYA 1VNAA 4KYPA 1C56A 2LR3A 3GKUA 5AQJA 5F2RA 2QXLA 2MBKA 2E8AA 1I2UA 2B68A 3QFPA 5AQMA 3D2EB 1JXCA 3LDLA 1UGLA 4AB0A 1MYNA 2LY5A 2QWMA 3ATVA 2KHOA 1JKZA 1ZYWA 4UADE 1I6GA 4FSVA 5AQZA 1NRAA 1PE4A 1FH3A 1T0ZA 2D56A 1BRZA 3QI7A 1XRSB 2QWOA 4H5WA 2GL1A 5FPEA 1NPIA 1TI5A 5AQGA 2E3GA 2LI7A 1KAXA 1GPTA 1DQ7A 4UJ0A 2GMOA 3LDOA 2QWRA 2QW9A 1NH5A 1ZVEA 1SN1A 1PX9A 2YIOA 5AQNA 3FZKA 5FPDA 3KOWA 1AHOA 3D2FA 3FZFA 3KVGA 3KP1A 4HE7A 5BPLA 2MZ0A 2KJAA 2QWLA 1T7EA 1KAZA 1PTXA 2LKBA 3CW4A 1ZUTA 2LT8A 1NGBA 1T1TA 3QMLA 5AQRA 1CN2A 1ZU3A 4H5RA 5AQHA 4UAFE 1N4NA 1DKGD 2QWNA 5AQOA 2BUPA 3E7RL 1NGEA 3KHWA 2LJMA 3CQXA 3JXUA 1LQQA 5AQQA 5KK4A 1C55A 1MR4A 3ATUA 1ATSA 2NY8X 5AQWA 3KOYA 4AAZA 2YEOA 2KYQA 1BMRA 1BA0A 3L4IA 1NGDA 1LQIA 5BPNA 5AQKA 3LDPA 2KGQA 1VNBA 1HX1A 2KBJA 2ATBA 1AYJA 3SF4D 3C7NA 2KSKA 1WMTA 3D2FB 1HPMA 1JZAA 2VY6A 2YC1C 2ASCA 5AQIA 5EY4A 4AEIA 2YBRC 5EVZA 3LDQA 1K8BA 2E3FA 3KC6A 3HSCA 3D2EA 2QWQA 3GL1A 2E88A 1I2VA 1L4VA 1NRBA 2QWPA 1CHZA 5AR0A 5CY0A 2E0HA 3A8YA 3BK3C 1NGFA 3GDQA 3I33A 5AQXA 1NE5A 1ATRA 1NGIA 1POIA 1QQNA 2E2FA 2YILA 3PSMA 1NGCA 1P00A 1S3XA 5AQPA 1SNBA 3IUCA 1OMYA 5EXWA 1KAYA 2LJ7A 5F0XA 3FZLA 1NGHA 2MN5A 5AQTA 1SEGA 2SN3A 1NGGA 3KP0A 5EX5A 2N66A 2BRZA 3L6QA 3KOXA 5AQSA 1BCGA 1DJTA 4CQKA 1ZFUA 1KV0A 2V7ZA 5AQLA 1BUPA 2YIPA 3C7NB 5BPMA 4H5VA 1ZYVA 3M3ZA 1NGJA 1JZBA 2N2QA 4KBOA 5AQVA 2KBKA 2LY6A 5BN8A 1HJOA 2I61A 1P0AA 3QFUA 4UAEF 3FE1A 1T7BA 2KPYA 3FZMA 2LN8A 5FPNA 1QQOA 3E7UX 5AQUA 5AQFA 1WWNA 1I6FA 2K35A 4V1DC 4HHFA 2M8BB 2KBHA 1BK8A 1B3CA 1BA1A 2N2RA 1QQMA 1SN4A 1NGAA 3FZHA 5BN9A 1WT7A 2A7TA 5F1XA 4GNIA 2JDQD 4FL9A 2NY9X 4H5TA 5FPMA 4IO8A 1OZZA 4H5NA 3KOZA
chains in the Genus database with same CATH topology
1GPSA 1T7AA 1ZVGA 2B3CA 1B7DA 1LQHA 2N69A 1ICAA 1VNAA 4KYPA 1C56A 2LR3A 1I2UA 2B68A 1JXCA 4AB0A 1MYNA 2LY5A 1JKZA 1ZYWA 1I6GA 1FH3A 1NRAA 1PE4A 1T0ZA 1BRZA 2GL1A 1NPIA 1TI5A 2E3GA 2LI7A 1GPTA 1DQ7A 4UJ0A 1NH5A 1ZVEA 1SN1A 1PX9A 1AHOA 4HE7A 2MZ0A 2KJAA 1T7EA 1PTXA 2LKBA 1ZUTA 2LT8A 1T1TA 1CN2A 1ZU3A 1N4NA 3E7RL 2LJMA 1LQQA 5KK4A 1C55A 1MR4A 2NY8X 4AAZA 2YEOA 2KYQA 1BMRA 1LQIA 2KGQA 1VNBA 2KBJA 2ATBA 1AYJA 2KSKA 1WMTA 1JZAA 4AEIA 2YC1C 2ASCA 2YBRC 2E3FA 1I2VA 1L4VA 1NRBA 5CY0A 1CHZA 2E0HA 1NE5A 3PSMA 1P00A 1SNBA 1OMYA 2LJ7A 1SEGA 2SN3A 2N66A 2BRZA 1BCGA 1DJTA 4CQKA 1ZFUA 1KV0A 1ZYVA 2N2QA 1JZBA 2KBKA 2LY6A 2I61A 1P0AA 1T7BA 2KPYA 3E7UX 1WWNA 1I6FA 4V1DC 4HHFA 2M8BB 2KBHA 1BK8A 1B3CA 2N2RA 1SN4A 1WT7A 2A7TA 2NY9X 1OZZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1GPS A;  1T7A A;  1ZVG A;  2B3C A;  1B7D A;  1LQH A;  2N69 A;  1ICA A;  1VNA A;  4KYP A;  1C56 A;  2LR3 A;  1I2U A;  2B68 A;  1JXC A;  4AB0 A;  1MYN A;  2LY5 A;  1JKZ A;  1ZYW A;  1I6G A;  1FH3 A;  1NRA A;  1PE4 A;  1T0Z A;  1BRZ A;  2GL1 A;  1NPI A;  1TI5 A;  2E3G A;  2LI7 A;  1GPT A;  1DQ7 A;  4UJ0 A;  1NH5 A;  1ZVE A;  1SN1 A;  1PX9 A;  1AHO A;  4HE7 A;  2MZ0 A;  2KJA A;  1T7E A;  1PTX A;  2LKB A;  1ZUT A;  2LT8 A;  1T1T A;  1CN2 A;  1ZU3 A;  1N4N A;  3E7R L;  2LJM A;  1LQQ A;  5KK4 A;  1C55 A;  1MR4 A;  2NY8 X;  4AAZ A;  2YEO A;  2KYQ A;  1BMR A;  1LQI A;  2KGQ A;  1VNB A;  2KBJ A;  2ATB A;  1AYJ A;  2KSK A;  1WMT A;  1JZA A;  4AEI A;  2YC1 C;  2ASC A;  2YBR C;  2E3F A;  1I2V A;  1L4V A;  1NRB A;  5CY0 A;  1CHZ A;  2E0H A;  1NE5 A;  3PSM A;  1P00 A;  1SNB A;  1OMY A;  2LJ7 A;  1SEG A;  2SN3 A;  2N66 A;  2BRZ A;  1BCG A;  1DJT A;  4CQK A;  1ZFU A;  1KV0 A;  1ZYV A;  2N2Q A;  1JZB A;  2KBK A;  2LY6 A;  2I61 A;  1P0A A;  1T7B A;  2KPY A;  3E7U X;  1WWN A;  1I6F A;  4V1D C;  4HHF A;  2M8B B;  2KBH A;  1BK8 A;  1B3C A;  2N2R A;  1SN4 A;  1WT7 A;  2A7T A;  2NY9 X;  1OZZ A; 
#chains in the Genus database with same CATH topology
 3LDN A;  3R2V A;  1YUW A;  1T7A A;  1ZVG A;  4HWI A;  1GPS A;  3AY9 A;  2B3C A;  1B7D A;  1LQH A;  2N69 A;  1ICA A;  3L56 A;  2G2K A;  5AQY A;  1VNA A;  4KYP A;  1C56 A;  2LR3 A;  3GKU A;  5AQJ A;  5F2R A;  2QXL A;  2MBK A;  2E8A A;  1I2U A;  2B68 A;  3QFP A;  5AQM A;  3D2E B;  1JXC A;  3LDL A;  1UGL A;  4AB0 A;  1MYN A;  2LY5 A;  2QWM A;  3ATV A;  2KHO A;  1JKZ A;  1ZYW A;  4UAD E;  1I6G A;  4FSV A;  5AQZ A;  1NRA A;  1PE4 A;  1FH3 A;  1T0Z A;  2D56 A;  1BRZ A;  3QI7 A;  1XRS B;  2QWO A;  4H5W A;  2GL1 A;  5FPE A;  1NPI A;  1TI5 A;  5AQG A;  2E3G A;  2LI7 A;  1KAX A;  1GPT A;  1DQ7 A;  4UJ0 A;  2GMO A;  3LDO A;  2QWR A;  2QW9 A;  1NH5 A;  1ZVE A;  1SN1 A;  1PX9 A;  2YIO A;  5AQN A;  3FZK A;  5FPD A;  3KOW A;  1AHO A;  3D2F A;  3FZF A;  3KVG A;  3KP1 A;  4HE7 A;  5BPL A;  2MZ0 A;  2KJA A;  2QWL A;  1T7E A;  1KAZ A;  1PTX A;  2LKB A;  3CW4 A;  1ZUT A;  2LT8 A;  1NGB A;  1T1T A;  3QML A;  5AQR A;  1CN2 A;  1ZU3 A;  4H5R A;  5AQH A;  4UAF E;  1N4N A;  1DKG D;  2QWN A;  5AQO A;  2BUP A;  3E7R L;  1NGE A;  3KHW A;  2LJM A;  3CQX A;  3JXU A;  1LQQ A;  5AQQ A;  5KK4 A;  1C55 A;  1MR4 A;  3ATU A;  1ATS A;  2NY8 X;  5AQW A;  3KOY A;  4AAZ A;  2YEO A;  2KYQ A;  1BMR A;  1BA0 A;  3L4I A;  1NGD A;  1LQI A;  5BPN A;  5AQK A;  3LDP A;  2KGQ A;  1VNB A;  1HX1 A;  2KBJ A;  2ATB A;  1AYJ A;  3SF4 D;  3C7N A;  2KSK A;  1WMT A;  3D2F B;  1HPM A;  1JZA A;  2VY6 A;  2YC1 C;  2ASC A;  5AQI A;  5EY4 A;  4AEI A;  2YBR C;  5EVZ A;  3LDQ A;  1K8B A;  2E3F A;  3KC6 A;  3HSC A;  3D2E A;  2QWQ A;  3GL1 A;  2E88 A;  1I2V A;  1L4V A;  1NRB A;  2QWP A;  1CHZ A;  5AR0 A;  5CY0 A;  2E0H A;  3A8Y A;  3BK3 C;  1NGF A;  3GDQ A;  3I33 A;  5AQX A;  1NE5 A;  1ATR A;  1NGI A;  1POI A;  1QQN A;  2E2F A;  2YIL A;  3PSM A;  1NGC A;  1P00 A;  1S3X A;  5AQP A;  1SNB A;  3IUC A;  1OMY A;  5EXW A;  1KAY A;  2LJ7 A;  5F0X A;  3FZL A;  1NGH A;  2MN5 A;  5AQT A;  1SEG A;  2SN3 A;  1NGG A;  3KP0 A;  5EX5 A;  2N66 A;  2BRZ A;  3L6Q A;  3KOX A;  5AQS A;  1BCG A;  1DJT A;  4CQK A;  1ZFU A;  1KV0 A;  2V7Z A;  5AQL A;  1BUP A;  2YIP A;  3C7N B;  5BPM A;  4H5V A;  1ZYV A;  3M3Z A;  1NGJ A;  1JZB A;  2N2Q A;  4KBO A;  5AQV A;  2KBK A;  2LY6 A;  5BN8 A;  1HJO A;  2I61 A;  1P0A A;  3QFU A;  4UAE F;  3FE1 A;  1T7B A;  2KPY A;  3FZM A;  2LN8 A;  5FPN A;  1QQO A;  3E7U X;  5AQU A;  5AQF A;  1WWN A;  1I6F A;  2K35 A;  4V1D C;  4HHF A;  2M8B B;  2KBH A;  1BK8 A;  1B3C A;  1BA1 A;  2N2R A;  1QQM A;  1SN4 A;  1NGA A;  3FZH A;  5BN9 A;  1WT7 A;  2A7T A;  5F1X A;  4GNI A;  2JDQ D;  4FL9 A;  2NY9 X;  4H5T A;  5FPM A;  4IO8 A;  1OZZ A;  4H5N A;  3KOZ A; 
#chains in the Genus database with same CATH homology
 1GPS A;  1T7A A;  1ZVG A;  2B3C A;  1B7D A;  1LQH A;  2N69 A;  1ICA A;  1VNA A;  4KYP A;  1C56 A;  2LR3 A;  1I2U A;  2B68 A;  1JXC A;  4AB0 A;  1MYN A;  2LY5 A;  1JKZ A;  1ZYW A;  1I6G A;  1FH3 A;  1NRA A;  1PE4 A;  1T0Z A;  1BRZ A;  2GL1 A;  1NPI A;  1TI5 A;  2E3G A;  2LI7 A;  1GPT A;  1DQ7 A;  4UJ0 A;  1NH5 A;  1ZVE A;  1SN1 A;  1PX9 A;  1AHO A;  4HE7 A;  2MZ0 A;  2KJA A;  1T7E A;  1PTX A;  2LKB A;  1ZUT A;  2LT8 A;  1T1T A;  1CN2 A;  1ZU3 A;  1N4N A;  3E7R L;  2LJM A;  1LQQ A;  5KK4 A;  1C55 A;  1MR4 A;  2NY8 X;  4AAZ A;  2YEO A;  2KYQ A;  1BMR A;  1LQI A;  2KGQ A;  1VNB A;  2KBJ A;  2ATB A;  1AYJ A;  2KSK A;  1WMT A;  1JZA A;  4AEI A;  2YC1 C;  2ASC A;  2YBR C;  2E3F A;  1I2V A;  1L4V A;  1NRB A;  5CY0 A;  1CHZ A;  2E0H A;  1NE5 A;  3PSM A;  1P00 A;  1SNB A;  1OMY A;  2LJ7 A;  1SEG A;  2SN3 A;  2N66 A;  2BRZ A;  1BCG A;  1DJT A;  4CQK A;  1ZFU A;  1KV0 A;  1ZYV A;  2N2Q A;  1JZB A;  2KBK A;  2LY6 A;  2I61 A;  1P0A A;  1T7B A;  2KPY A;  3E7U X;  1WWN A;  1I6F A;  4V1D C;  4HHF A;  2M8B B;  2KBH A;  1BK8 A;  1B3C A;  2N2R A;  1SN4 A;  1WT7 A;  2A7T A;  2NY9 X;  1OZZ A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...