1LQHA

Insecticidal alpha scorpion toxin isolated from the venom of scorpion leiurus quinquestriatus hebraeus, nmr, minimized average structure
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
65
structure length
65
Chain Sequence
MVRDAYIAKNYNCVYECFRDAYCNELCTKNGASSGYCQWAGKYGNACWCYALPDNVPIRVPGKCR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Neurotoxin
source organism Leiurus quinquestriatus hebraeus
publication title Solution structures of a highly insecticidal recombinant scorpion alpha-toxin and a mutant with increased activity.
pubmed doi rcsb
molecule keywords INSECT TOXIN ALPHA
total genus 11
structure length 65
sequence length 65
ec nomenclature
pdb deposition date 1996-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1lqhA00
1WMTA 1B3CA 1SEGA 1CN2A 1I2VA 1GPTA 1JXCA 1P00A 1JZAA 2E3FA 1P0AA 4AAZA 1SNBA 1T7BA 2YBRC 1ZYVA 1MYNA 1T1TA 2N69A 1ZVEA 2LY6A 2KBHA 2N2QA 1I6FA 2NY9X 2LJMA 2ASCA 1T7AA 1ZUTA 4CQKA 2LY5A 1CHZA 4V1DC 1FH3A 1DJTA 2LJ7A 1LQQA 1ICAA 1L4VA 4HHFA 1OMYA 2NY8X 2BRZA 1NE5A 1TI5A 2N2RA 3E7RL 2LT8A 2MZ0A 1C56A 1ZYWA 2KSKA 4AB0A 1VNBA 2KYQA 1SN1A 1ZU3A 3E7UX 2KBKA 1NH5A 1LQIA 5KK4A 1MR4A 1VNAA 2KJAA 2A7TA 1N4NA 1KV0A 2KPYA 1BCGA 1OZZA 2B68A 1B7DA 1NRBA 1PX9A 1ZFUA 1PTXA 2YEOA 1DQ7A 5CY0A 1C55A 2B3CA 2GL1A 2SN3A 1AYJA 1T0ZA 1LQHA 1NRAA 4HE7A 1T7EA 1SN4A 1WWNA 1JKZA 1JZBA 1I2UA 1BK8A 2E3GA 4AEIA 2ATBA 2KGQA 2N66A 1BMRA 2M8BB 1I6GA 4KYPA 3PSMA 2LR3A 1BRZA 1PE4A 2I61A 4UJ0A 1WT7A 2LKBA 1NPIA 1ZVGA 1AHOA 2E0HA 2YC1C 1GPSA 2KBJA 2LI7A
chains in the Genus database with same CATH superfamily
1WMTA 3ATUA 1B3CA 1SEGA 3L4IA 3IUCA 1CN2A 5BPMA 2QWNA 5F2RA 1I2VA 1GPTA 1JXCA 1P00A 1S3XA 5AQZA 5FPNA 1JZAA 2E3FA 2KHOA 3FZFA 1P0AA 3D2EA 3KOZA 4AAZA 1SNBA 1T7BA 1KAYA 2LN8A 2YBRC 1NGAA 3D2FB 3HSCA 1ZYVA 3SF4D 3KP0A 1MYNA 5AQYA 1T1TA 2N69A 1HJOA 1ZVEA 2QWQA 5AQSA 5AQIA 2LY6A 5AQKA 5FPDA 2KBHA 2N2QA 1I6FA 2NY9X 1NGBA 5BPNA 2QWOA 2QWMA 4UAFE 2LJMA 2ASCA 3QMLA 1ATRA 3LDOA 5FPEA 5AQHA 2QWLA 1T7AA 1ZUTA 5AQLA 5EXWA 2LY5A 1CHZA 3FZHA 4H5TA 4V1DC 5AQJA 4CQKA 1DJTA 5AQPA 1FH3A 2LJ7A 1LQQA 1NGIA 1ICAA 1L4VA 4HHFA 1OMYA 1BA1A 2QWPA 5EVZA 1KAXA 2BRZA 2NY8X 2VY6A 4H5WA 1NE5A 1TI5A 2N2RA 3E7RL 4GNIA 2E88A 5AR0A 2LT8A 2MZ0A 1C56A 1NGEA 3LDLA 3LDNA 5BPLA 1ZYWA 2KSKA 3D2EB 4HWIA 1QQOA 4AB0A 1VNBA 2KYQA 1SN1A 1NGCA 1ZU3A 3LDQA 3ATVA 3E7UX 2KBKA 3KOYA 3JXUA 1NH5A 1LQIA 3KP1A 5AQFA 5KK4A 1MR4A 1VNAA 2KJAA 3GDQA 5AQQA 5F1XA 2A7TA 2G2KA 1KAZA 1N4NA 4FSVA 1KV0A 2KPYA 1OZZA 5AQWA 2B68A 1B7DA 1NRBA 1PX9A 2GMOA 3FE1A 1ZFUA 3KOWA 3FZKA 4KBOA 3CQXA 5AQXA 1DKGD 1PTXA 2V7ZA 2YEOA 1NGGA 2JDQD 3QI7A 1ATSA 5AQOA 3BK3C 1DQ7A 5CY0A 3M3ZA 1BUPA 4IO8A 4UAEF 1C55A 2B3CA 3C7NA 3R2VA 5AQUA 2E2FA 2GL1A 1XRSB 3L56A 5BN8A 2SN3A 1AYJA 2K35A 3AY9A 1QQNA 1T0ZA 1LQHA 2KBJA 2QWRA 1NRAA 3A8YA 5AQGA 4HE7A 1T7EA 2MN5A 3QFPA 5BN9A 1SN4A 1WWNA 3L6QA 1JKZA 2YIPA 2BUPA 1NGJA 5AQRA 2QW9A 1BA0A 4H5RA 1YUWA 1JZBA 5EX5A 4H5NA 1I2UA 1BK8A 1HX1A 1NGFA 2E3GA 1NGDA 5AQTA 2ATBA 2KGQA 2N66A 1NGHA 2YIOA 2M8BB 4AEIA 1BMRA 1I6GA 5AQNA 4UADE 4KYPA 5AQMA 3KC6A 5EY4A 2QXLA 3PSMA 5FPMA 3D2FA 2LR3A 1QQMA 3KVGA 2E8AA 1BRZA 3KOXA 5F0XA 1PE4A 1UGLA 2I61A 4UJ0A 3C7NB 1POIA 3CW4A 4H5VA 3QFUA 1WT7A 2LKBA 1NPIA 4FL9A 3FZLA 3KHWA 2D56A 1ZVGA 1K8BA 1AHOA 3I33A 3GKUA 2YILA 5AQVA 3GL1A 3FZMA 3LDPA 2E0HA 2MBKA 2YC1C 1GPSA 1HPMA 1BCGA 2LI7A
chains in the Genus database with same CATH topology
1WMTA 1B3CA 1SEGA 1CN2A 1I2VA 1GPTA 1JXCA 1P00A 1JZAA 2E3FA 1P0AA 4AAZA 1SNBA 1T7BA 2YBRC 1ZYVA 1MYNA 1T1TA 2N69A 1ZVEA 2LY6A 2KBHA 2N2QA 1I6FA 2NY9X 2LJMA 2ASCA 1T7AA 1ZUTA 4CQKA 2LY5A 1CHZA 4V1DC 1FH3A 1DJTA 2LJ7A 1LQQA 1ICAA 1L4VA 4HHFA 1OMYA 2NY8X 2BRZA 1NE5A 1TI5A 2N2RA 3E7RL 2LT8A 2MZ0A 1C56A 1ZYWA 2KSKA 4AB0A 1VNBA 2KYQA 1SN1A 1ZU3A 3E7UX 2KBKA 1NH5A 1LQIA 5KK4A 1MR4A 1VNAA 2KJAA 2A7TA 1N4NA 1KV0A 2KPYA 1BCGA 1OZZA 2B68A 1B7DA 1NRBA 1PX9A 1ZFUA 1PTXA 2YEOA 1DQ7A 5CY0A 1C55A 2B3CA 2GL1A 2SN3A 1AYJA 1T0ZA 1LQHA 1NRAA 4HE7A 1T7EA 1SN4A 1WWNA 1JKZA 1JZBA 1I2UA 1BK8A 2E3GA 4AEIA 2ATBA 2KGQA 2N66A 1BMRA 2M8BB 1I6GA 4KYPA 3PSMA 2LR3A 1BRZA 1PE4A 2I61A 4UJ0A 1WT7A 2LKBA 1NPIA 1ZVGA 1AHOA 2E0HA 2YC1C 1GPSA 2KBJA 2LI7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WMT A;  1B3C A;  1SEG A;  1CN2 A;  1I2V A;  1GPT A;  1JXC A;  1P00 A;  1JZA A;  2E3F A;  1P0A A;  4AAZ A;  1SNB A;  1T7B A;  2YBR C;  1ZYV A;  1MYN A;  1T1T A;  2N69 A;  1ZVE A;  2LY6 A;  2KBH A;  2N2Q A;  1I6F A;  2NY9 X;  2LJM A;  2ASC A;  1T7A A;  1ZUT A;  4CQK A;  2LY5 A;  1CHZ A;  4V1D C;  1FH3 A;  1DJT A;  2LJ7 A;  1LQQ A;  1ICA A;  1L4V A;  4HHF A;  1OMY A;  2NY8 X;  2BRZ A;  1NE5 A;  1TI5 A;  2N2R A;  3E7R L;  2LT8 A;  2MZ0 A;  1C56 A;  1ZYW A;  2KSK A;  4AB0 A;  1VNB A;  2KYQ A;  1SN1 A;  1ZU3 A;  3E7U X;  2KBK A;  1NH5 A;  1LQI A;  5KK4 A;  1MR4 A;  1VNA A;  2KJA A;  2A7T A;  1N4N A;  1KV0 A;  2KPY A;  1BCG A;  1OZZ A;  2B68 A;  1B7D A;  1NRB A;  1PX9 A;  1ZFU A;  1PTX A;  2YEO A;  1DQ7 A;  5CY0 A;  1C55 A;  2B3C A;  2GL1 A;  2SN3 A;  1AYJ A;  1T0Z A;  1LQH A;  1NRA A;  4HE7 A;  1T7E A;  1SN4 A;  1WWN A;  1JKZ A;  1JZB A;  1I2U A;  1BK8 A;  2E3G A;  4AEI A;  2ATB A;  2KGQ A;  2N66 A;  1BMR A;  2M8B B;  1I6G A;  4KYP A;  3PSM A;  2LR3 A;  1BRZ A;  1PE4 A;  2I61 A;  4UJ0 A;  1WT7 A;  2LKB A;  1NPI A;  1ZVG A;  1AHO A;  2E0H A;  2YC1 C;  1GPS A;  2KBJ A;  2LI7 A; 
#chains in the Genus database with same CATH topology
 1WMT A;  3ATU A;  1B3C A;  1SEG A;  3L4I A;  3IUC A;  1CN2 A;  5BPM A;  2QWN A;  5F2R A;  1I2V A;  1GPT A;  1JXC A;  1P00 A;  1S3X A;  5AQZ A;  5FPN A;  1JZA A;  2E3F A;  2KHO A;  3FZF A;  1P0A A;  3D2E A;  3KOZ A;  4AAZ A;  1SNB A;  1T7B A;  1KAY A;  2LN8 A;  2YBR C;  1NGA A;  3D2F B;  3HSC A;  1ZYV A;  3SF4 D;  3KP0 A;  1MYN A;  5AQY A;  1T1T A;  2N69 A;  1HJO A;  1ZVE A;  2QWQ A;  5AQS A;  5AQI A;  2LY6 A;  5AQK A;  5FPD A;  2KBH A;  2N2Q A;  1I6F A;  2NY9 X;  1NGB A;  5BPN A;  2QWO A;  2QWM A;  4UAF E;  2LJM A;  2ASC A;  3QML A;  1ATR A;  3LDO A;  5FPE A;  5AQH A;  2QWL A;  1T7A A;  1ZUT A;  5AQL A;  5EXW A;  2LY5 A;  1CHZ A;  3FZH A;  4H5T A;  4V1D C;  5AQJ A;  4CQK A;  1DJT A;  5AQP A;  1FH3 A;  2LJ7 A;  1LQQ A;  1NGI A;  1ICA A;  1L4V A;  4HHF A;  1OMY A;  1BA1 A;  2QWP A;  5EVZ A;  1KAX A;  2BRZ A;  2NY8 X;  2VY6 A;  4H5W A;  1NE5 A;  1TI5 A;  2N2R A;  3E7R L;  4GNI A;  2E88 A;  5AR0 A;  2LT8 A;  2MZ0 A;  1C56 A;  1NGE A;  3LDL A;  3LDN A;  5BPL A;  1ZYW A;  2KSK A;  3D2E B;  4HWI A;  1QQO A;  4AB0 A;  1VNB A;  2KYQ A;  1SN1 A;  1NGC A;  1ZU3 A;  3LDQ A;  3ATV A;  3E7U X;  2KBK A;  3KOY A;  3JXU A;  1NH5 A;  1LQI A;  3KP1 A;  5AQF A;  5KK4 A;  1MR4 A;  1VNA A;  2KJA A;  3GDQ A;  5AQQ A;  5F1X A;  2A7T A;  2G2K A;  1KAZ A;  1N4N A;  4FSV A;  1KV0 A;  2KPY A;  1OZZ A;  5AQW A;  2B68 A;  1B7D A;  1NRB A;  1PX9 A;  2GMO A;  3FE1 A;  1ZFU A;  3KOW A;  3FZK A;  4KBO A;  3CQX A;  5AQX A;  1DKG D;  1PTX A;  2V7Z A;  2YEO A;  1NGG A;  2JDQ D;  3QI7 A;  1ATS A;  5AQO A;  3BK3 C;  1DQ7 A;  5CY0 A;  3M3Z A;  1BUP A;  4IO8 A;  4UAE F;  1C55 A;  2B3C A;  3C7N A;  3R2V A;  5AQU A;  2E2F A;  2GL1 A;  1XRS B;  3L56 A;  5BN8 A;  2SN3 A;  1AYJ A;  2K35 A;  3AY9 A;  1QQN A;  1T0Z A;  1LQH A;  2KBJ A;  2QWR A;  1NRA A;  3A8Y A;  5AQG A;  4HE7 A;  1T7E A;  2MN5 A;  3QFP A;  5BN9 A;  1SN4 A;  1WWN A;  3L6Q A;  1JKZ A;  2YIP A;  2BUP A;  1NGJ A;  5AQR A;  2QW9 A;  1BA0 A;  4H5R A;  1YUW A;  1JZB A;  5EX5 A;  4H5N A;  1I2U A;  1BK8 A;  1HX1 A;  1NGF A;  2E3G A;  1NGD A;  5AQT A;  2ATB A;  2KGQ A;  2N66 A;  1NGH A;  2YIO A;  2M8B B;  4AEI A;  1BMR A;  1I6G A;  5AQN A;  4UAD E;  4KYP A;  5AQM A;  3KC6 A;  5EY4 A;  2QXL A;  3PSM A;  5FPM A;  3D2F A;  2LR3 A;  1QQM A;  3KVG A;  2E8A A;  1BRZ A;  3KOX A;  5F0X A;  1PE4 A;  1UGL A;  2I61 A;  4UJ0 A;  3C7N B;  1POI A;  3CW4 A;  4H5V A;  3QFU A;  1WT7 A;  2LKB A;  1NPI A;  4FL9 A;  3FZL A;  3KHW A;  2D56 A;  1ZVG A;  1K8B A;  1AHO A;  3I33 A;  3GKU A;  2YIL A;  5AQV A;  3GL1 A;  3FZM A;  3LDP A;  2E0H A;  2MBK A;  2YC1 C;  1GPS A;  1HPM A;  1BCG A;  2LI7 A; 
#chains in the Genus database with same CATH homology
 1WMT A;  1B3C A;  1SEG A;  1CN2 A;  1I2V A;  1GPT A;  1JXC A;  1P00 A;  1JZA A;  2E3F A;  1P0A A;  4AAZ A;  1SNB A;  1T7B A;  2YBR C;  1ZYV A;  1MYN A;  1T1T A;  2N69 A;  1ZVE A;  2LY6 A;  2KBH A;  2N2Q A;  1I6F A;  2NY9 X;  2LJM A;  2ASC A;  1T7A A;  1ZUT A;  4CQK A;  2LY5 A;  1CHZ A;  4V1D C;  1FH3 A;  1DJT A;  2LJ7 A;  1LQQ A;  1ICA A;  1L4V A;  4HHF A;  1OMY A;  2NY8 X;  2BRZ A;  1NE5 A;  1TI5 A;  2N2R A;  3E7R L;  2LT8 A;  2MZ0 A;  1C56 A;  1ZYW A;  2KSK A;  4AB0 A;  1VNB A;  2KYQ A;  1SN1 A;  1ZU3 A;  3E7U X;  2KBK A;  1NH5 A;  1LQI A;  5KK4 A;  1MR4 A;  1VNA A;  2KJA A;  2A7T A;  1N4N A;  1KV0 A;  2KPY A;  1BCG A;  1OZZ A;  2B68 A;  1B7D A;  1NRB A;  1PX9 A;  1ZFU A;  1PTX A;  2YEO A;  1DQ7 A;  5CY0 A;  1C55 A;  2B3C A;  2GL1 A;  2SN3 A;  1AYJ A;  1T0Z A;  1LQH A;  1NRA A;  4HE7 A;  1T7E A;  1SN4 A;  1WWN A;  1JKZ A;  1JZB A;  1I2U A;  1BK8 A;  2E3G A;  4AEI A;  2ATB A;  2KGQ A;  2N66 A;  1BMR A;  2M8B B;  1I6G A;  4KYP A;  3PSM A;  2LR3 A;  1BRZ A;  1PE4 A;  2I61 A;  4UJ0 A;  1WT7 A;  2LKB A;  1NPI A;  1ZVG A;  1AHO A;  2E0H A;  2YC1 C;  1GPS A;  2KBJ A;  2LI7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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