1C56A

Nmr solution structure of butantoxin
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
40
structure length
40
Chain Sequence
WCSTCLDLACGASRECYDPCFKAFGRAHGKCMNNKCRCYT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title NMR solution structure of butantoxin.
pubmed doi rcsb
molecule tags Toxin
molecule keywords BUTANTOXIN
total genus 4
structure length 40
sequence length 40
ec nomenclature
pdb deposition date 1999-10-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00451 Toxin_2 Scorpion short toxin, BmKK2
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1c56A00
4AAZA 1AYJA 1WMTA 1BRZA 2BRZA 2YEOA 3E7RL 2LY6A 2E3FA 1I6FA 2LKBA 1BK8A 2KYQA 2E3GA 3PSMA 1ZFUA 2LY5A 1ZVEA 4HE7A 2N66A 2LT8A 1ZVGA 1PE4A 2GL1A 4CQKA 1ICAA 1GPTA 1SN4A 1B3CA 2I61A 1TI5A 2KBKA 1T7BA 1T7AA 1B7DA 2N2QA 1OMYA 2ASCA 2KPYA 1C55A 2B68A 4V1DC 1OZZA 1I2UA 1ZYWA 4AB0A 1NRBA 2LJMA 2E0HA 1SNBA 1CN2A 1JZBA 1BCGA 2N69A 1T7EA 1WWNA 2KJAA 1AHOA 2ATBA 1L4VA 1GPSA 1C56A 1DJTA 1N4NA 2N2RA 4AEIA 2KBJA 2A7TA 1NH5A 2KGQA 5KK4A 1ZYVA 1JKZA 1NPIA 1MR4A 1P0AA 1BMRA 2LR3A 1SEGA 3E7UX 2M8BB 1LQIA 1T0ZA 1JXCA 4HHFA 1SN1A 1JZAA 1ZU3A 2B3CA 4UJ0A 1KV0A 2NY8X 1CHZA 1WT7A 1I6GA 1PTXA 2SN3A 1ZUTA 1NRAA 1PX9A 2YBRC 5CY0A 4KYPA 2NY9X 1VNAA 2KBHA 1LQQA 2LI7A 2MZ0A 1P00A 2YC1C 1FH3A 1LQHA 1I2VA 2KSKA 1T1TA 2LJ7A 1VNBA 1MYNA 1NE5A 1DQ7A
chains in the Genus database with same CATH superfamily
4AAZA 1AYJA 5AQTA 1WMTA 1BRZA 2BRZA 2YEOA 3E7RL 5AQNA 1HJOA 4H5TA 5AQFA 2LY6A 2MN5A 5FPNA 5EX5A 3QFUA 5FPMA 2E3FA 1I6FA 2LKBA 3FZKA 1KAYA 2YIOA 1BK8A 2KYQA 2E3GA 3L56A 3PSMA 5AQUA 1ZFUA 2LY5A 1ZVEA 2MBKA 3IUCA 3C7NB 4HE7A 3FZHA 2N66A 2LT8A 1KAZA 1NGGA 4UAFE 5BN8A 1ZVGA 2JDQD 1PE4A 2GMOA 2GL1A 3LDLA 4CQKA 2QWOA 1YUWA 5FPEA 1ICAA 1GPTA 1SN4A 1B3CA 3KVGA 5AQZA 2I61A 3LDPA 3LDOA 1UGLA 3L6QA 2LN8A 1TI5A 1ATRA 4FSVA 5FPDA 3D2FB 2KBKA 3ATUA 3KOXA 1T7BA 1T7AA 1B7DA 1BA0A 2K35A 2N2QA 2QWMA 3HSCA 3L4IA 1OMYA 5BN9A 3KP0A 1NGFA 1NGBA 2ASCA 2KPYA 1C55A 2B68A 4V1DC 3FZFA 1OZZA 1I2UA 1ZYWA 4AB0A 3I33A 5AQHA 1NRBA 3FZLA 2LJMA 3QI7A 5BPLA 2E0HA 2G2KA 1SNBA 3C7NA 1CN2A 1JZBA 1NGDA 2YIPA 2E8AA 1NGHA 3CW4A 4UADE 1BCGA 2N69A 5F0XA 1KAXA 1T7EA 1NGAA 1WWNA 5AQSA 3CQXA 2KHOA 1QQOA 2KJAA 5AQIA 5EXWA 5AQWA 3GL1A 1AHOA 3D2FA 5AQXA 1DKGD 2QWQA 1HX1A 2QWLA 2QW9A 2ATBA 2D56A 2QWRA 5AR0A 5EY4A 1L4VA 5F1XA 1GPSA 1QQMA 1C56A 1DJTA 5AQGA 3D2EB 1N4NA 4FL9A 5EVZA 2N2RA 5AQQA 1POIA 4AEIA 2KBJA 2A7TA 4H5RA 1NH5A 2KGQA 3LDQA 5KK4A 1ATSA 1ZYVA 1NPIA 1JKZA 3AY9A 1MR4A 3R2VA 3A8YA 1P0AA 1BMRA 2LR3A 4IO8A 1SEGA 3E7UX 5AQKA 2M8BB 5BPNA 1XRSB 1NGIA 3FZMA 1BA1A 5F2RA 1LQIA 1T0ZA 1JXCA 3GKUA 4HHFA 1SN1A 1QQNA 5BPMA 1JZAA 1ZU3A 2QWPA 2B3CA 4HWIA 1NGCA 4UJ0A 1KV0A 3LDNA 2NY8X 1CHZA 1WT7A 1I6GA 4H5NA 3FE1A 1PTXA 1BUPA 1NGJA 2BUPA 2SN3A 3QFPA 1ZUTA 5AQYA 3D2EA 1NRAA 1PX9A 2V7ZA 2YBRC 3JXUA 5CY0A 4GNIA 2QWNA 1K8BA 4UAEF 3ATVA 3KOYA 4KBOA 4KYPA 2QXLA 3KOZA 2NY9X 1VNAA 2KBHA 1S3XA 5AQOA 3SF4D 3BK3C 4H5WA 3KOWA 1LQQA 3QMLA 2LI7A 2MZ0A 3KC6A 1P00A 3KHWA 2YC1C 1FH3A 1HPMA 5AQJA 5AQPA 1LQHA 1I2VA 4H5VA 2KSKA 3M3ZA 1T1TA 5AQLA 1NGEA 2LJ7A 5AQVA 1VNBA 5AQRA 3GDQA 2E2FA 5AQMA 1MYNA 3KP1A 2VY6A 1NE5A 1DQ7A 2YILA 2E88A
chains in the Genus database with same CATH topology
4AAZA 1AYJA 1WMTA 1BRZA 2BRZA 2YEOA 3E7RL 2LY6A 2E3FA 1I6FA 2LKBA 1BK8A 2KYQA 2E3GA 3PSMA 1ZFUA 2LY5A 1ZVEA 4HE7A 2N66A 2LT8A 1ZVGA 1PE4A 2GL1A 4CQKA 1ICAA 1GPTA 1SN4A 1B3CA 2I61A 1TI5A 2KBKA 1T7BA 1T7AA 1B7DA 2N2QA 1OMYA 2ASCA 2KPYA 1C55A 2B68A 4V1DC 1OZZA 1I2UA 1ZYWA 4AB0A 1NRBA 2LJMA 2E0HA 1SNBA 1CN2A 1JZBA 1BCGA 2N69A 1T7EA 1WWNA 2KJAA 1AHOA 2ATBA 1L4VA 1GPSA 1C56A 1DJTA 1N4NA 2N2RA 4AEIA 2KBJA 2A7TA 1NH5A 2KGQA 5KK4A 1ZYVA 1JKZA 1NPIA 1MR4A 1P0AA 1BMRA 2LR3A 1SEGA 3E7UX 2M8BB 1LQIA 1T0ZA 1JXCA 4HHFA 1SN1A 1JZAA 1ZU3A 2B3CA 4UJ0A 1KV0A 2NY8X 1CHZA 1WT7A 1I6GA 1PTXA 2SN3A 1ZUTA 1NRAA 1PX9A 2YBRC 5CY0A 4KYPA 2NY9X 1VNAA 2KBHA 1LQQA 2LI7A 2MZ0A 1P00A 2YC1C 1FH3A 1LQHA 1I2VA 2KSKA 1T1TA 2LJ7A 1VNBA 1MYNA 1NE5A 1DQ7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AAZ A;  1AYJ A;  1WMT A;  1BRZ A;  2BRZ A;  2YEO A;  3E7R L;  2LY6 A;  2E3F A;  1I6F A;  2LKB A;  1BK8 A;  2KYQ A;  2E3G A;  3PSM A;  1ZFU A;  2LY5 A;  1ZVE A;  4HE7 A;  2N66 A;  2LT8 A;  1ZVG A;  1PE4 A;  2GL1 A;  4CQK A;  1ICA A;  1GPT A;  1SN4 A;  1B3C A;  2I61 A;  1TI5 A;  2KBK A;  1T7B A;  1T7A A;  1B7D A;  2N2Q A;  1OMY A;  2ASC A;  2KPY A;  1C55 A;  2B68 A;  4V1D C;  1OZZ A;  1I2U A;  1ZYW A;  4AB0 A;  1NRB A;  2LJM A;  2E0H A;  1SNB A;  1CN2 A;  1JZB A;  1BCG A;  2N69 A;  1T7E A;  1WWN A;  2KJA A;  1AHO A;  2ATB A;  1L4V A;  1GPS A;  1C56 A;  1DJT A;  1N4N A;  2N2R A;  4AEI A;  2KBJ A;  2A7T A;  1NH5 A;  2KGQ A;  5KK4 A;  1ZYV A;  1JKZ A;  1NPI A;  1MR4 A;  1P0A A;  1BMR A;  2LR3 A;  1SEG A;  3E7U X;  2M8B B;  1LQI A;  1T0Z A;  1JXC A;  4HHF A;  1SN1 A;  1JZA A;  1ZU3 A;  2B3C A;  4UJ0 A;  1KV0 A;  2NY8 X;  1CHZ A;  1WT7 A;  1I6G A;  1PTX A;  2SN3 A;  1ZUT A;  1NRA A;  1PX9 A;  2YBR C;  5CY0 A;  4KYP A;  2NY9 X;  1VNA A;  2KBH A;  1LQQ A;  2LI7 A;  2MZ0 A;  1P00 A;  2YC1 C;  1FH3 A;  1LQH A;  1I2V A;  2KSK A;  1T1T A;  2LJ7 A;  1VNB A;  1MYN A;  1NE5 A;  1DQ7 A; 
#chains in the Genus database with same CATH topology
 4AAZ A;  1AYJ A;  5AQT A;  1WMT A;  1BRZ A;  2BRZ A;  2YEO A;  3E7R L;  5AQN A;  1HJO A;  4H5T A;  5AQF A;  2LY6 A;  2MN5 A;  5FPN A;  5EX5 A;  3QFU A;  5FPM A;  2E3F A;  1I6F A;  2LKB A;  3FZK A;  1KAY A;  2YIO A;  1BK8 A;  2KYQ A;  2E3G A;  3L56 A;  3PSM A;  5AQU A;  1ZFU A;  2LY5 A;  1ZVE A;  2MBK A;  3IUC A;  3C7N B;  4HE7 A;  3FZH A;  2N66 A;  2LT8 A;  1KAZ A;  1NGG A;  4UAF E;  5BN8 A;  1ZVG A;  2JDQ D;  1PE4 A;  2GMO A;  2GL1 A;  3LDL A;  4CQK A;  2QWO A;  1YUW A;  5FPE A;  1ICA A;  1GPT A;  1SN4 A;  1B3C A;  3KVG A;  5AQZ A;  2I61 A;  3LDP A;  3LDO A;  1UGL A;  3L6Q A;  2LN8 A;  1TI5 A;  1ATR A;  4FSV A;  5FPD A;  3D2F B;  2KBK A;  3ATU A;  3KOX A;  1T7B A;  1T7A A;  1B7D A;  1BA0 A;  2K35 A;  2N2Q A;  2QWM A;  3HSC A;  3L4I A;  1OMY A;  5BN9 A;  3KP0 A;  1NGF A;  1NGB A;  2ASC A;  2KPY A;  1C55 A;  2B68 A;  4V1D C;  3FZF A;  1OZZ A;  1I2U A;  1ZYW A;  4AB0 A;  3I33 A;  5AQH A;  1NRB A;  3FZL A;  2LJM A;  3QI7 A;  5BPL A;  2E0H A;  2G2K A;  1SNB A;  3C7N A;  1CN2 A;  1JZB A;  1NGD A;  2YIP A;  2E8A A;  1NGH A;  3CW4 A;  4UAD E;  1BCG A;  2N69 A;  5F0X A;  1KAX A;  1T7E A;  1NGA A;  1WWN A;  5AQS A;  3CQX A;  2KHO A;  1QQO A;  2KJA A;  5AQI A;  5EXW A;  5AQW A;  3GL1 A;  1AHO A;  3D2F A;  5AQX A;  1DKG D;  2QWQ A;  1HX1 A;  2QWL A;  2QW9 A;  2ATB A;  2D56 A;  2QWR A;  5AR0 A;  5EY4 A;  1L4V A;  5F1X A;  1GPS A;  1QQM A;  1C56 A;  1DJT A;  5AQG A;  3D2E B;  1N4N A;  4FL9 A;  5EVZ A;  2N2R A;  5AQQ A;  1POI A;  4AEI A;  2KBJ A;  2A7T A;  4H5R A;  1NH5 A;  2KGQ A;  3LDQ A;  5KK4 A;  1ATS A;  1ZYV A;  1NPI A;  1JKZ A;  3AY9 A;  1MR4 A;  3R2V A;  3A8Y A;  1P0A A;  1BMR A;  2LR3 A;  4IO8 A;  1SEG A;  3E7U X;  5AQK A;  2M8B B;  5BPN A;  1XRS B;  1NGI A;  3FZM A;  1BA1 A;  5F2R A;  1LQI A;  1T0Z A;  1JXC A;  3GKU A;  4HHF A;  1SN1 A;  1QQN A;  5BPM A;  1JZA A;  1ZU3 A;  2QWP A;  2B3C A;  4HWI A;  1NGC A;  4UJ0 A;  1KV0 A;  3LDN A;  2NY8 X;  1CHZ A;  1WT7 A;  1I6G A;  4H5N A;  3FE1 A;  1PTX A;  1BUP A;  1NGJ A;  2BUP A;  2SN3 A;  3QFP A;  1ZUT A;  5AQY A;  3D2E A;  1NRA A;  1PX9 A;  2V7Z A;  2YBR C;  3JXU A;  5CY0 A;  4GNI A;  2QWN A;  1K8B A;  4UAE F;  3ATV A;  3KOY A;  4KBO A;  4KYP A;  2QXL A;  3KOZ A;  2NY9 X;  1VNA A;  2KBH A;  1S3X A;  5AQO A;  3SF4 D;  3BK3 C;  4H5W A;  3KOW A;  1LQQ A;  3QML A;  2LI7 A;  2MZ0 A;  3KC6 A;  1P00 A;  3KHW A;  2YC1 C;  1FH3 A;  1HPM A;  5AQJ A;  5AQP A;  1LQH A;  1I2V A;  4H5V A;  2KSK A;  3M3Z A;  1T1T A;  5AQL A;  1NGE A;  2LJ7 A;  5AQV A;  1VNB A;  5AQR A;  3GDQ A;  2E2F A;  5AQM A;  1MYN A;  3KP1 A;  2VY6 A;  1NE5 A;  1DQ7 A;  2YIL A;  2E88 A; 
#chains in the Genus database with same CATH homology
 4AAZ A;  1AYJ A;  1WMT A;  1BRZ A;  2BRZ A;  2YEO A;  3E7R L;  2LY6 A;  2E3F A;  1I6F A;  2LKB A;  1BK8 A;  2KYQ A;  2E3G A;  3PSM A;  1ZFU A;  2LY5 A;  1ZVE A;  4HE7 A;  2N66 A;  2LT8 A;  1ZVG A;  1PE4 A;  2GL1 A;  4CQK A;  1ICA A;  1GPT A;  1SN4 A;  1B3C A;  2I61 A;  1TI5 A;  2KBK A;  1T7B A;  1T7A A;  1B7D A;  2N2Q A;  1OMY A;  2ASC A;  2KPY A;  1C55 A;  2B68 A;  4V1D C;  1OZZ A;  1I2U A;  1ZYW A;  4AB0 A;  1NRB A;  2LJM A;  2E0H A;  1SNB A;  1CN2 A;  1JZB A;  1BCG A;  2N69 A;  1T7E A;  1WWN A;  2KJA A;  1AHO A;  2ATB A;  1L4V A;  1GPS A;  1C56 A;  1DJT A;  1N4N A;  2N2R A;  4AEI A;  2KBJ A;  2A7T A;  1NH5 A;  2KGQ A;  5KK4 A;  1ZYV A;  1JKZ A;  1NPI A;  1MR4 A;  1P0A A;  1BMR A;  2LR3 A;  1SEG A;  3E7U X;  2M8B B;  1LQI A;  1T0Z A;  1JXC A;  4HHF A;  1SN1 A;  1JZA A;  1ZU3 A;  2B3C A;  4UJ0 A;  1KV0 A;  2NY8 X;  1CHZ A;  1WT7 A;  1I6G A;  1PTX A;  2SN3 A;  1ZUT A;  1NRA A;  1PX9 A;  2YBR C;  5CY0 A;  4KYP A;  2NY9 X;  1VNA A;  2KBH A;  1LQQ A;  2LI7 A;  2MZ0 A;  1P00 A;  2YC1 C;  1FH3 A;  1LQH A;  1I2V A;  2KSK A;  1T1T A;  2LJ7 A;  1VNB A;  1MYN A;  1NE5 A;  1DQ7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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