1CN2A

Solution structure of toxin 2 from centruroides noxius hoffmann, a beta scorpion neurotoxin acting on sodium channels, nmr, 15 structures
Total Genus 14

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
66
structure length
66
Chain Sequence
KEGYLVDKNTGCKYECLKLGDNDYCLRECKQQYGKGAGGYCYAFACWCTHLYEQAIVWPLPNKRCS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI1 (52-55)S1 (3-4)S3 (45-48)TIV1 (7-10)TIV2 (8-11)TIV6 (41-44)AH1 (23-31)S2 (39-42)TIV3 (18-21)TIV5 (34-37)TIV4 (31-34)TIV8 (61-64)TI2 (60-63)Updating...
connected with : NaN
molecule tags Neurotoxin
publication title Solution structure of toxin 2 from centruroides noxius Hoffmann, a beta-scorpion neurotoxin acting on sodium channels.
pubmed doi rcsb
molecule keywords TOXIN 2
total genus 14
structure length 66
sequence length 66
ec nomenclature
pdb deposition date 1998-06-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1cn2A00
2YC1C 1PE4A 3E7RL 4V1DC 2M8BB 1SN4A 1SN1A 1P00A 2BRZA 1B7DA 2ASCA 2YBRC 1ZFUA 1ICAA 2E3FA 2KSKA 1SNBA 1DJTA 1SEGA 1BRZA 2NY9X 2LT8A 1NRAA 1C56A 1GPSA 1BK8A 1LQHA 3E7UX 2E0HA 2E3GA 1ZVEA 1PX9A 1I2UA 2KGQA 4KYPA 3PSMA 2I61A 2KJAA 4AAZA 1WMTA 2KBJA 1JZAA 1MR4A 1T7BA 2N2RA 2LI7A 5KK4A 1BCGA 2SN3A 1CN2A 4CQKA 1GPTA 1MYNA 1PTXA 1AYJA 1TI5A 4HE7A 1DQ7A 1T7EA 1L4VA 2YEOA 2LJMA 1KV0A 2GL1A 1ZYWA 1BMRA 1VNAA 1LQQA 1ZVGA 2N2QA 2ATBA 1WWNA 2KPYA 2N66A 1OMYA 1NH5A 2B68A 1T1TA 1I6GA 1N4NA 1LQIA 1T7AA 5CY0A 1ZYVA 1OZZA 1I6FA 1C55A 1I2VA 2LKBA 1P0AA 2B3CA 1JKZA 1NRBA 1ZU3A 2KBHA 2LR3A 1FH3A 2KBKA 2KYQA 1WT7A 2MZ0A 1JZBA 1CHZA 2LY5A 4AEIA 2LY6A 2N69A 1B3CA 2A7TA 1NPIA 1VNBA 2NY8X 1T0ZA 4HHFA 1JXCA 2LJ7A 1ZUTA 4AB0A 4UJ0A 1NE5A 1AHOA
chains in the Genus database with same CATH superfamily
3BK3C 5AQGA 2YC1C 1PE4A 3E7RL 4KBOA 4V1DC 4FSVA 2M8BB 1SN4A 1SN1A 3LDQA 1KAZA 3JXUA 3FZFA 1P00A 2BRZA 1B7DA 3KVGA 5AQFA 3A8YA 3QFPA 5BN8A 2ASCA 2YBRC 2YIPA 1BA0A 1NGFA 1ZFUA 2G2KA 3KOWA 3KP1A 3QFUA 1ICAA 1NGAA 2E3FA 3L6QA 2KSKA 1SNBA 4IO8A 4UAEF 3HSCA 1DJTA 1SEGA 5BPNA 3FZKA 5AR0A 1BRZA 5AQTA 2NY9X 1S3XA 4H5RA 2LT8A 1NRAA 2E2FA 1C56A 3KP0A 3LDLA 1BK8A 1LQHA 3E7UX 5FPMA 2D56A 1GPSA 2E88A 2E0HA 2E3GA 1UGLA 1NGCA 1ZVEA 1DKGD 1KAYA 4UAFE 3CW4A 5AQJA 5AQOA 3ATUA 1PX9A 3D2EA 1I2UA 2KGQA 4KYPA 5AQHA 1ATSA 3LDOA 2VY6A 3GL1A 3KOZA 3PSMA 2I61A 2QWOA 1HJOA 5EXWA 5AQZA 2QWPA 2KJAA 3D2FB 4AAZA 1WMTA 2KBJA 3AY9A 1JZAA 3CQXA 1MR4A 1T7BA 2N2RA 3LDPA 4UADE 2LI7A 3R2VA 5KK4A 1BCGA 5EVZA 2SN3A 3SF4D 4HWIA 1CN2A 4CQKA 1GPTA 5AQRA 1MYNA 1PTXA 1AYJA 1TI5A 4HE7A 1DQ7A 5F2RA 1T7EA 1QQNA 3M3ZA 1L4VA 2YEOA 3FE1A 3L56A 5AQUA 2LJMA 1KV0A 5AQMA 2GL1A 1ZYWA 1K8BA 2MBKA 1NGGA 5AQLA 5AQQA 4FL9A 5AQNA 2KHOA 1BMRA 3KOYA 1VNAA 3C7NB 2QWLA 1LQQA 1ZVGA 2N2QA 3ATVA 2ATBA 3GKUA 3KC6A 1WWNA 2KPYA 2N66A 1OMYA 2K35A 2QWNA 3QMLA 1NH5A 2YIOA 2B68A 3LDNA 3L4IA 3GDQA 1T1TA 1I6GA 1POIA 1N4NA 1LQIA 3I33A 5AQSA 1T7AA 5BN9A 5CY0A 5AQKA 1BA1A 2BUPA 1ZYVA 2LN8A 1OZZA 1I6FA 3QI7A 1C55A 1QQOA 1HPMA 1I2VA 2GMOA 2QWMA 5AQWA 2V7ZA 1NGJA 3FZMA 3KOXA 1NGDA 2LKBA 1P0AA 5AQVA 2B3CA 1JKZA 1NRBA 5AQXA 4H5TA 3D2FA 3IUCA 5BPMA 1ZU3A 2MN5A 1YUWA 3FZHA 2KBHA 4H5VA 5F0XA 2E8AA 2LR3A 5AQPA 2QXLA 5FPNA 1FH3A 2KBKA 3D2EB 3FZLA 1ATRA 2KYQA 5FPDA 1WT7A 5AQIA 2MZ0A 4GNIA 1JZBA 1CHZA 5FPEA 1HX1A 3KHWA 2LY5A 5BPLA 4AEIA 2LY6A 2N69A 5AQYA 2A7TA 1B3CA 2QWRA 1VNBA 1NPIA 2NY8X 1BUPA 1NGEA 1NGHA 1T0ZA 1JXCA 4HHFA 5EX5A 5EY4A 2JDQD 2LJ7A 4H5WA 1XRSB 1ZUTA 2QWQA 1KAXA 4AB0A 1NGIA 3C7NA 4UJ0A 1NE5A 5F1XA 1AHOA 2YILA 4H5NA 1QQMA 1NGBA 2QW9A
chains in the Genus database with same CATH topology
2YC1C 1PE4A 3E7RL 4V1DC 2M8BB 1SN4A 1SN1A 1P00A 2BRZA 1B7DA 2ASCA 2YBRC 1ZFUA 1ICAA 2E3FA 2KSKA 1SNBA 1DJTA 1SEGA 1BRZA 2NY9X 2LT8A 1NRAA 1C56A 1GPSA 1BK8A 1LQHA 3E7UX 2E0HA 2E3GA 1ZVEA 1PX9A 1I2UA 2KGQA 4KYPA 3PSMA 2I61A 2KJAA 4AAZA 1WMTA 2KBJA 1JZAA 1MR4A 1T7BA 2N2RA 2LI7A 5KK4A 1BCGA 2SN3A 1CN2A 4CQKA 1GPTA 1MYNA 1PTXA 1AYJA 1TI5A 4HE7A 1DQ7A 1T7EA 1L4VA 2YEOA 2LJMA 1KV0A 2GL1A 1ZYWA 1BMRA 1VNAA 1LQQA 1ZVGA 2N2QA 2ATBA 1WWNA 2KPYA 2N66A 1OMYA 1NH5A 2B68A 1T1TA 1I6GA 1N4NA 1LQIA 1T7AA 5CY0A 1ZYVA 1OZZA 1I6FA 1C55A 1I2VA 2LKBA 1P0AA 2B3CA 1JKZA 1NRBA 1ZU3A 2KBHA 2LR3A 1FH3A 2KBKA 2KYQA 1WT7A 2MZ0A 1JZBA 1CHZA 2LY5A 4AEIA 2LY6A 2N69A 1B3CA 2A7TA 1NPIA 1VNBA 2NY8X 1T0ZA 4HHFA 1JXCA 2LJ7A 1ZUTA 4AB0A 4UJ0A 1NE5A 1AHOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YC1 C;  1PE4 A;  3E7R L;  4V1D C;  2M8B B;  1SN4 A;  1SN1 A;  1P00 A;  2BRZ A;  1B7D A;  2ASC A;  2YBR C;  1ZFU A;  1ICA A;  2E3F A;  2KSK A;  1SNB A;  1DJT A;  1SEG A;  1BRZ A;  2NY9 X;  2LT8 A;  1NRA A;  1C56 A;  1GPS A;  1BK8 A;  1LQH A;  3E7U X;  2E0H A;  2E3G A;  1ZVE A;  1PX9 A;  1I2U A;  2KGQ A;  4KYP A;  3PSM A;  2I61 A;  2KJA A;  4AAZ A;  1WMT A;  2KBJ A;  1JZA A;  1MR4 A;  1T7B A;  2N2R A;  2LI7 A;  5KK4 A;  1BCG A;  2SN3 A;  1CN2 A;  4CQK A;  1GPT A;  1MYN A;  1PTX A;  1AYJ A;  1TI5 A;  4HE7 A;  1DQ7 A;  1T7E A;  1L4V A;  2YEO A;  2LJM A;  1KV0 A;  2GL1 A;  1ZYW A;  1BMR A;  1VNA A;  1LQQ A;  1ZVG A;  2N2Q A;  2ATB A;  1WWN A;  2KPY A;  2N66 A;  1OMY A;  1NH5 A;  2B68 A;  1T1T A;  1I6G A;  1N4N A;  1LQI A;  1T7A A;  5CY0 A;  1ZYV A;  1OZZ A;  1I6F A;  1C55 A;  1I2V A;  2LKB A;  1P0A A;  2B3C A;  1JKZ A;  1NRB A;  1ZU3 A;  2KBH A;  2LR3 A;  1FH3 A;  2KBK A;  2KYQ A;  1WT7 A;  2MZ0 A;  1JZB A;  1CHZ A;  2LY5 A;  4AEI A;  2LY6 A;  2N69 A;  1B3C A;  2A7T A;  1NPI A;  1VNB A;  2NY8 X;  1T0Z A;  4HHF A;  1JXC A;  2LJ7 A;  1ZUT A;  4AB0 A;  4UJ0 A;  1NE5 A;  1AHO A; 
#chains in the Genus database with same CATH topology
 3BK3 C;  5AQG A;  2YC1 C;  1PE4 A;  3E7R L;  4KBO A;  4V1D C;  4FSV A;  2M8B B;  1SN4 A;  1SN1 A;  3LDQ A;  1KAZ A;  3JXU A;  3FZF A;  1P00 A;  2BRZ A;  1B7D A;  3KVG A;  5AQF A;  3A8Y A;  3QFP A;  5BN8 A;  2ASC A;  2YBR C;  2YIP A;  1BA0 A;  1NGF A;  1ZFU A;  2G2K A;  3KOW A;  3KP1 A;  3QFU A;  1ICA A;  1NGA A;  2E3F A;  3L6Q A;  2KSK A;  1SNB A;  4IO8 A;  4UAE F;  3HSC A;  1DJT A;  1SEG A;  5BPN A;  3FZK A;  5AR0 A;  1BRZ A;  5AQT A;  2NY9 X;  1S3X A;  4H5R A;  2LT8 A;  1NRA A;  2E2F A;  1C56 A;  3KP0 A;  3LDL A;  1BK8 A;  1LQH A;  3E7U X;  5FPM A;  2D56 A;  1GPS A;  2E88 A;  2E0H A;  2E3G A;  1UGL A;  1NGC A;  1ZVE A;  1DKG D;  1KAY A;  4UAF E;  3CW4 A;  5AQJ A;  5AQO A;  3ATU A;  1PX9 A;  3D2E A;  1I2U A;  2KGQ A;  4KYP A;  5AQH A;  1ATS A;  3LDO A;  2VY6 A;  3GL1 A;  3KOZ A;  3PSM A;  2I61 A;  2QWO A;  1HJO A;  5EXW A;  5AQZ A;  2QWP A;  2KJA A;  3D2F B;  4AAZ A;  1WMT A;  2KBJ A;  3AY9 A;  1JZA A;  3CQX A;  1MR4 A;  1T7B A;  2N2R A;  3LDP A;  4UAD E;  2LI7 A;  3R2V A;  5KK4 A;  1BCG A;  5EVZ A;  2SN3 A;  3SF4 D;  4HWI A;  1CN2 A;  4CQK A;  1GPT A;  5AQR A;  1MYN A;  1PTX A;  1AYJ A;  1TI5 A;  4HE7 A;  1DQ7 A;  5F2R A;  1T7E A;  1QQN A;  3M3Z A;  1L4V A;  2YEO A;  3FE1 A;  3L56 A;  5AQU A;  2LJM A;  1KV0 A;  5AQM A;  2GL1 A;  1ZYW A;  1K8B A;  2MBK A;  1NGG A;  5AQL A;  5AQQ A;  4FL9 A;  5AQN A;  2KHO A;  1BMR A;  3KOY A;  1VNA A;  3C7N B;  2QWL A;  1LQQ A;  1ZVG A;  2N2Q A;  3ATV A;  2ATB A;  3GKU A;  3KC6 A;  1WWN A;  2KPY A;  2N66 A;  1OMY A;  2K35 A;  2QWN A;  3QML A;  1NH5 A;  2YIO A;  2B68 A;  3LDN A;  3L4I A;  3GDQ A;  1T1T A;  1I6G A;  1POI A;  1N4N A;  1LQI A;  3I33 A;  5AQS A;  1T7A A;  5BN9 A;  5CY0 A;  5AQK A;  1BA1 A;  2BUP A;  1ZYV A;  2LN8 A;  1OZZ A;  1I6F A;  3QI7 A;  1C55 A;  1QQO A;  1HPM A;  1I2V A;  2GMO A;  2QWM A;  5AQW A;  2V7Z A;  1NGJ A;  3FZM A;  3KOX A;  1NGD A;  2LKB A;  1P0A A;  5AQV A;  2B3C A;  1JKZ A;  1NRB A;  5AQX A;  4H5T A;  3D2F A;  3IUC A;  5BPM A;  1ZU3 A;  2MN5 A;  1YUW A;  3FZH A;  2KBH A;  4H5V A;  5F0X A;  2E8A A;  2LR3 A;  5AQP A;  2QXL A;  5FPN A;  1FH3 A;  2KBK A;  3D2E B;  3FZL A;  1ATR A;  2KYQ A;  5FPD A;  1WT7 A;  5AQI A;  2MZ0 A;  4GNI A;  1JZB A;  1CHZ A;  5FPE A;  1HX1 A;  3KHW A;  2LY5 A;  5BPL A;  4AEI A;  2LY6 A;  2N69 A;  5AQY A;  2A7T A;  1B3C A;  2QWR A;  1VNB A;  1NPI A;  2NY8 X;  1BUP A;  1NGE A;  1NGH A;  1T0Z A;  1JXC A;  4HHF A;  5EX5 A;  5EY4 A;  2JDQ D;  2LJ7 A;  4H5W A;  1XRS B;  1ZUT A;  2QWQ A;  1KAX A;  4AB0 A;  1NGI A;  3C7N A;  4UJ0 A;  1NE5 A;  5F1X A;  1AHO A;  2YIL A;  4H5N A;  1QQM A;  1NGB A;  2QW9 A; 
#chains in the Genus database with same CATH homology
 2YC1 C;  1PE4 A;  3E7R L;  4V1D C;  2M8B B;  1SN4 A;  1SN1 A;  1P00 A;  2BRZ A;  1B7D A;  2ASC A;  2YBR C;  1ZFU A;  1ICA A;  2E3F A;  2KSK A;  1SNB A;  1DJT A;  1SEG A;  1BRZ A;  2NY9 X;  2LT8 A;  1NRA A;  1C56 A;  1GPS A;  1BK8 A;  1LQH A;  3E7U X;  2E0H A;  2E3G A;  1ZVE A;  1PX9 A;  1I2U A;  2KGQ A;  4KYP A;  3PSM A;  2I61 A;  2KJA A;  4AAZ A;  1WMT A;  2KBJ A;  1JZA A;  1MR4 A;  1T7B A;  2N2R A;  2LI7 A;  5KK4 A;  1BCG A;  2SN3 A;  1CN2 A;  4CQK A;  1GPT A;  1MYN A;  1PTX A;  1AYJ A;  1TI5 A;  4HE7 A;  1DQ7 A;  1T7E A;  1L4V A;  2YEO A;  2LJM A;  1KV0 A;  2GL1 A;  1ZYW A;  1BMR A;  1VNA A;  1LQQ A;  1ZVG A;  2N2Q A;  2ATB A;  1WWN A;  2KPY A;  2N66 A;  1OMY A;  1NH5 A;  2B68 A;  1T1T A;  1I6G A;  1N4N A;  1LQI A;  1T7A A;  5CY0 A;  1ZYV A;  1OZZ A;  1I6F A;  1C55 A;  1I2V A;  2LKB A;  1P0A A;  2B3C A;  1JKZ A;  1NRB A;  1ZU3 A;  2KBH A;  2LR3 A;  1FH3 A;  2KBK A;  2KYQ A;  1WT7 A;  2MZ0 A;  1JZB A;  1CHZ A;  2LY5 A;  4AEI A;  2LY6 A;  2N69 A;  1B3C A;  2A7T A;  1NPI A;  1VNB A;  2NY8 X;  1T0Z A;  4HHF A;  1JXC A;  2LJ7 A;  1ZUT A;  4AB0 A;  4UJ0 A;  1NE5 A;  1AHO A; 
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