1I2UA

Nmr solution structures of antifungal heliomicin
Total Genus 11

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
44
structure length
44
Chain Sequence
DKLIGSCVWGAVNYTSDCNGECKRRGYKGGHCGSFANVNCWCET
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (2-6)TIV1 (8-11)TIV2 (11-14)TIV5 (35-38)EMPTYS3 (39-42)TIV3 (15-18)S2 (30-32)TIV4 (34-37)AH1 (18-25)Updating...
connected with : NaN
publication title Solution structures of the antifungal heliomicin and a selected variant with both antibacterial and antifungal activities.
pubmed doi rcsb
molecule tags Antifungal protein
source organism Heliothis virescens
molecule keywords DEFENSIN HELIOMICIN
total genus 11
structure length 44
sequence length 44
ec nomenclature
pdb deposition date 2001-02-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1i2uA00
2A7TA 1OMYA 1PX9A 1ZUTA 1P0AA 1ZYWA 2GL1A 1TI5A 2LJMA 5KK4A 2LY6A 1WT7A 1JKZA 4HE7A 1I6GA 2KBKA 1L4VA 1T1TA 4AEIA 1NE5A 1AHOA 4AB0A 1VNAA 1I2UA 2I61A 1JXCA 1ZVEA 4CQKA 1DQ7A 2N69A 2YBRC 3PSMA 2SN3A 2KBJA 2KBHA 1C56A 2KYQA 3E7UX 1T7EA 1VNBA 2E3FA 2LT8A 1MYNA 1NPIA 2KSKA 2B68A 1T7AA 4AAZA 1NRBA 1ZVGA 2M8BB 2KJAA 4V1DC 5CY0A 1PE4A 4UJ0A 2LJ7A 1BRZA 1BMRA 2B3CA 1WMTA 2KPYA 2N66A 2NY9X 1T7BA 1PTXA 1SNBA 1DJTA 2NY8X 4HHFA 2E0HA 1GPTA 1OZZA 1NRAA 4KYPA 1C55A 2MZ0A 1B7DA 2N2RA 1ZYVA 1ZFUA 1JZBA 2ASCA 1T0ZA 1P00A 2YC1C 1ZU3A 2LI7A 1FH3A 2YEOA 3E7RL 1CN2A 2BRZA 1LQQA 1I2VA 2E3GA 2LR3A 1B3CA 1SN4A 1BK8A 1LQIA 2KGQA 2LY5A 1JZAA 2N2QA 1KV0A 1GPSA 1BCGA 1AYJA 1CHZA 1LQHA 1WWNA 1I6FA 1MR4A 1SN1A 2ATBA 1NH5A 1SEGA 2LKBA 1ICAA 1N4NA
chains in the Genus database with same CATH superfamily
2A7TA 1NGDA 5AQZA 1OMYA 2D56A 1KAXA 3KOXA 1NGFA 1HX1A 1PX9A 1KAYA 1ZUTA 1NGAA 4KBOA 1P0AA 1ZYWA 2YIOA 3QI7A 4IO8A 2GL1A 1TI5A 3A8YA 1HJOA 5EXWA 1BUPA 2E2FA 2LN8A 5EY4A 2LJMA 5BPNA 5AQRA 1QQNA 5KK4A 2LY6A 1WT7A 5AQQA 1NGEA 2E8AA 3C7NB 4HE7A 5BN8A 1JKZA 1I6GA 5EX5A 2KBKA 5AQGA 5FPMA 1L4VA 1T1TA 2KHOA 1NGJA 3M3ZA 4AEIA 1NE5A 5AQXA 1NGHA 1AHOA 2QWLA 4AB0A 1VNAA 5AR0A 1I2UA 5AQPA 2I61A 1JXCA 4H5VA 5AQUA 1KAZA 4FSVA 1BA0A 1ZVEA 3FZHA 3KP0A 4CQKA 1DQ7A 4UAFE 2N69A 5AQYA 2YBRC 2QWRA 3KOWA 3CW4A 3PSMA 1POIA 3D2EB 2SN3A 2KBJA 2KBHA 5BPLA 1C56A 2QXLA 2QWNA 1UGLA 4UADE 2KYQA 5AQIA 3E7UX 1T7EA 2BUPA 1VNBA 2K35A 4FL9A 2E3FA 5AQTA 2LT8A 1MYNA 3C7NA 1NPIA 3CQXA 5F2RA 3L6QA 2G2KA 2KSKA 3FZMA 5FPNA 2B68A 1T7AA 4AAZA 1NRBA 1ZVGA 2MN5A 3FE1A 1K8BA 3HSCA 2M8BB 3LDNA 5BPMA 2KJAA 3IUCA 3LDOA 4UAEF 4V1DC 2YILA 1PE4A 5AQOA 4UJ0A 5CY0A 2LJ7A 5F0XA 3LDQA 5AQMA 2QWQA 3ATUA 2MBKA 3GKUA 4H5NA 5AQJA 5EVZA 1BMRA 1BRZA 2B3CA 1WMTA 1XRSB 2VY6A 3LDPA 5AQHA 2KPYA 2N66A 3AY9A 1BA1A 2NY9X 3D2FB 1ATRA 3GL1A 5FPEA 1T7BA 3D2EA 1PTXA 1SNBA 3I33A 1DJTA 2NY8X 4HWIA 4HHFA 2E0HA 4GNIA 1GPTA 1OZZA 3BK3C 5AQSA 1NGGA 1NRAA 3KHWA 4KYPA 1C55A 2MZ0A 1B7DA 2N2RA 1ZYVA 1ZFUA 1JZBA 3QFUA 2ASCA 5AQNA 1T0ZA 2GMOA 1P00A 1YUWA 2YC1C 1ZU3A 2LI7A 3ATVA 2QW9A 1FH3A 3KP1A 1NGBA 1ATSA 2QWMA 2YEOA 3L56A 5F1XA 3E7RL 1CN2A 2BRZA 1LQQA 3QMLA 2E88A 2QWOA 1S3XA 1QQMA 5AQVA 1I2VA 2E3GA 2QWPA 2LR3A 1NGIA 3GDQA 3QFPA 2V7ZA 3D2FA 5BN9A 5FPDA 1B3CA 1SN4A 4H5RA 4H5WA 3FZFA 3KC6A 1BK8A 3LDLA 1LQIA 3KOZA 3KVGA 3FZLA 3L4IA 2KGQA 5AQKA 2LY5A 1JZAA 1NGCA 3R2VA 2N2QA 5AQFA 1KV0A 1GPSA 1BCGA 1AYJA 1CHZA 2YIPA 3KOYA 1LQHA 1WWNA 1DKGD 5AQLA 1I6FA 1MR4A 2JDQD 1SN1A 2ATBA 3FZKA 5AQWA 1QQOA 1NH5A 1SEGA 3SF4D 2LKBA 1ICAA 3JXUA 1HPMA 4H5TA 1N4NA
chains in the Genus database with same CATH topology
2A7TA 1OMYA 1PX9A 1ZUTA 1P0AA 1ZYWA 2GL1A 1TI5A 2LJMA 5KK4A 2LY6A 1WT7A 1JKZA 4HE7A 1I6GA 2KBKA 1L4VA 1T1TA 4AEIA 1NE5A 1AHOA 4AB0A 1VNAA 1I2UA 2I61A 1JXCA 1ZVEA 4CQKA 1DQ7A 2N69A 2YBRC 3PSMA 2SN3A 2KBJA 2KBHA 1C56A 2KYQA 3E7UX 1T7EA 1VNBA 2E3FA 2LT8A 1MYNA 1NPIA 2KSKA 2B68A 1T7AA 4AAZA 1NRBA 1ZVGA 2M8BB 2KJAA 4V1DC 5CY0A 1PE4A 4UJ0A 2LJ7A 1BRZA 1BMRA 2B3CA 1WMTA 2KPYA 2N66A 2NY9X 1T7BA 1PTXA 1SNBA 1DJTA 2NY8X 4HHFA 2E0HA 1GPTA 1OZZA 1NRAA 4KYPA 1C55A 2MZ0A 1B7DA 2N2RA 1ZYVA 1ZFUA 1JZBA 2ASCA 1T0ZA 1P00A 2YC1C 1ZU3A 2LI7A 1FH3A 2YEOA 3E7RL 1CN2A 2BRZA 1LQQA 1I2VA 2E3GA 2LR3A 1B3CA 1SN4A 1BK8A 1LQIA 2KGQA 2LY5A 1JZAA 2N2QA 1KV0A 1GPSA 1BCGA 1AYJA 1CHZA 1LQHA 1WWNA 1I6FA 1MR4A 1SN1A 2ATBA 1NH5A 1SEGA 2LKBA 1ICAA 1N4NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A7T A;  1OMY A;  1PX9 A;  1ZUT A;  1P0A A;  1ZYW A;  2GL1 A;  1TI5 A;  2LJM A;  5KK4 A;  2LY6 A;  1WT7 A;  1JKZ A;  4HE7 A;  1I6G A;  2KBK A;  1L4V A;  1T1T A;  4AEI A;  1NE5 A;  1AHO A;  4AB0 A;  1VNA A;  1I2U A;  2I61 A;  1JXC A;  1ZVE A;  4CQK A;  1DQ7 A;  2N69 A;  2YBR C;  3PSM A;  2SN3 A;  2KBJ A;  2KBH A;  1C56 A;  2KYQ A;  3E7U X;  1T7E A;  1VNB A;  2E3F A;  2LT8 A;  1MYN A;  1NPI A;  2KSK A;  2B68 A;  1T7A A;  4AAZ A;  1NRB A;  1ZVG A;  2M8B B;  2KJA A;  4V1D C;  5CY0 A;  1PE4 A;  4UJ0 A;  2LJ7 A;  1BRZ A;  1BMR A;  2B3C A;  1WMT A;  2KPY A;  2N66 A;  2NY9 X;  1T7B A;  1PTX A;  1SNB A;  1DJT A;  2NY8 X;  4HHF A;  2E0H A;  1GPT A;  1OZZ A;  1NRA A;  4KYP A;  1C55 A;  2MZ0 A;  1B7D A;  2N2R A;  1ZYV A;  1ZFU A;  1JZB A;  2ASC A;  1T0Z A;  1P00 A;  2YC1 C;  1ZU3 A;  2LI7 A;  1FH3 A;  2YEO A;  3E7R L;  1CN2 A;  2BRZ A;  1LQQ A;  1I2V A;  2E3G A;  2LR3 A;  1B3C A;  1SN4 A;  1BK8 A;  1LQI A;  2KGQ A;  2LY5 A;  1JZA A;  2N2Q A;  1KV0 A;  1GPS A;  1BCG A;  1AYJ A;  1CHZ A;  1LQH A;  1WWN A;  1I6F A;  1MR4 A;  1SN1 A;  2ATB A;  1NH5 A;  1SEG A;  2LKB A;  1ICA A;  1N4N A; 
#chains in the Genus database with same CATH topology
 2A7T A;  1NGD A;  5AQZ A;  1OMY A;  2D56 A;  1KAX A;  3KOX A;  1NGF A;  1HX1 A;  1PX9 A;  1KAY A;  1ZUT A;  1NGA A;  4KBO A;  1P0A A;  1ZYW A;  2YIO A;  3QI7 A;  4IO8 A;  2GL1 A;  1TI5 A;  3A8Y A;  1HJO A;  5EXW A;  1BUP A;  2E2F A;  2LN8 A;  5EY4 A;  2LJM A;  5BPN A;  5AQR A;  1QQN A;  5KK4 A;  2LY6 A;  1WT7 A;  5AQQ A;  1NGE A;  2E8A A;  3C7N B;  4HE7 A;  5BN8 A;  1JKZ A;  1I6G A;  5EX5 A;  2KBK A;  5AQG A;  5FPM A;  1L4V A;  1T1T A;  2KHO A;  1NGJ A;  3M3Z A;  4AEI A;  1NE5 A;  5AQX A;  1NGH A;  1AHO A;  2QWL A;  4AB0 A;  1VNA A;  5AR0 A;  1I2U A;  5AQP A;  2I61 A;  1JXC A;  4H5V A;  5AQU A;  1KAZ A;  4FSV A;  1BA0 A;  1ZVE A;  3FZH A;  3KP0 A;  4CQK A;  1DQ7 A;  4UAF E;  2N69 A;  5AQY A;  2YBR C;  2QWR A;  3KOW A;  3CW4 A;  3PSM A;  1POI A;  3D2E B;  2SN3 A;  2KBJ A;  2KBH A;  5BPL A;  1C56 A;  2QXL A;  2QWN A;  1UGL A;  4UAD E;  2KYQ A;  5AQI A;  3E7U X;  1T7E A;  2BUP A;  1VNB A;  2K35 A;  4FL9 A;  2E3F A;  5AQT A;  2LT8 A;  1MYN A;  3C7N A;  1NPI A;  3CQX A;  5F2R A;  3L6Q A;  2G2K A;  2KSK A;  3FZM A;  5FPN A;  2B68 A;  1T7A A;  4AAZ A;  1NRB A;  1ZVG A;  2MN5 A;  3FE1 A;  1K8B A;  3HSC A;  2M8B B;  3LDN A;  5BPM A;  2KJA A;  3IUC A;  3LDO A;  4UAE F;  4V1D C;  2YIL A;  1PE4 A;  5AQO A;  4UJ0 A;  5CY0 A;  2LJ7 A;  5F0X A;  3LDQ A;  5AQM A;  2QWQ A;  3ATU A;  2MBK A;  3GKU A;  4H5N A;  5AQJ A;  5EVZ A;  1BMR A;  1BRZ A;  2B3C A;  1WMT A;  1XRS B;  2VY6 A;  3LDP A;  5AQH A;  2KPY A;  2N66 A;  3AY9 A;  1BA1 A;  2NY9 X;  3D2F B;  1ATR A;  3GL1 A;  5FPE A;  1T7B A;  3D2E A;  1PTX A;  1SNB A;  3I33 A;  1DJT A;  2NY8 X;  4HWI A;  4HHF A;  2E0H A;  4GNI A;  1GPT A;  1OZZ A;  3BK3 C;  5AQS A;  1NGG A;  1NRA A;  3KHW A;  4KYP A;  1C55 A;  2MZ0 A;  1B7D A;  2N2R A;  1ZYV A;  1ZFU A;  1JZB A;  3QFU A;  2ASC A;  5AQN A;  1T0Z A;  2GMO A;  1P00 A;  1YUW A;  2YC1 C;  1ZU3 A;  2LI7 A;  3ATV A;  2QW9 A;  1FH3 A;  3KP1 A;  1NGB A;  1ATS A;  2QWM A;  2YEO A;  3L56 A;  5F1X A;  3E7R L;  1CN2 A;  2BRZ A;  1LQQ A;  3QML A;  2E88 A;  2QWO A;  1S3X A;  1QQM A;  5AQV A;  1I2V A;  2E3G A;  2QWP A;  2LR3 A;  1NGI A;  3GDQ A;  3QFP A;  2V7Z A;  3D2F A;  5BN9 A;  5FPD A;  1B3C A;  1SN4 A;  4H5R A;  4H5W A;  3FZF A;  3KC6 A;  1BK8 A;  3LDL A;  1LQI A;  3KOZ A;  3KVG A;  3FZL A;  3L4I A;  2KGQ A;  5AQK A;  2LY5 A;  1JZA A;  1NGC A;  3R2V A;  2N2Q A;  5AQF A;  1KV0 A;  1GPS A;  1BCG A;  1AYJ A;  1CHZ A;  2YIP A;  3KOY A;  1LQH A;  1WWN A;  1DKG D;  5AQL A;  1I6F A;  1MR4 A;  2JDQ D;  1SN1 A;  2ATB A;  3FZK A;  5AQW A;  1QQO A;  1NH5 A;  1SEG A;  3SF4 D;  2LKB A;  1ICA A;  3JXU A;  1HPM A;  4H5T A;  1N4N A; 
#chains in the Genus database with same CATH homology
 2A7T A;  1OMY A;  1PX9 A;  1ZUT A;  1P0A A;  1ZYW A;  2GL1 A;  1TI5 A;  2LJM A;  5KK4 A;  2LY6 A;  1WT7 A;  1JKZ A;  4HE7 A;  1I6G A;  2KBK A;  1L4V A;  1T1T A;  4AEI A;  1NE5 A;  1AHO A;  4AB0 A;  1VNA A;  1I2U A;  2I61 A;  1JXC A;  1ZVE A;  4CQK A;  1DQ7 A;  2N69 A;  2YBR C;  3PSM A;  2SN3 A;  2KBJ A;  2KBH A;  1C56 A;  2KYQ A;  3E7U X;  1T7E A;  1VNB A;  2E3F A;  2LT8 A;  1MYN A;  1NPI A;  2KSK A;  2B68 A;  1T7A A;  4AAZ A;  1NRB A;  1ZVG A;  2M8B B;  2KJA A;  4V1D C;  5CY0 A;  1PE4 A;  4UJ0 A;  2LJ7 A;  1BRZ A;  1BMR A;  2B3C A;  1WMT A;  2KPY A;  2N66 A;  2NY9 X;  1T7B A;  1PTX A;  1SNB A;  1DJT A;  2NY8 X;  4HHF A;  2E0H A;  1GPT A;  1OZZ A;  1NRA A;  4KYP A;  1C55 A;  2MZ0 A;  1B7D A;  2N2R A;  1ZYV A;  1ZFU A;  1JZB A;  2ASC A;  1T0Z A;  1P00 A;  2YC1 C;  1ZU3 A;  2LI7 A;  1FH3 A;  2YEO A;  3E7R L;  1CN2 A;  2BRZ A;  1LQQ A;  1I2V A;  2E3G A;  2LR3 A;  1B3C A;  1SN4 A;  1BK8 A;  1LQI A;  2KGQ A;  2LY5 A;  1JZA A;  2N2Q A;  1KV0 A;  1GPS A;  1BCG A;  1AYJ A;  1CHZ A;  1LQH A;  1WWN A;  1I6F A;  1MR4 A;  1SN1 A;  2ATB A;  1NH5 A;  1SEG A;  2LKB A;  1ICA A;  1N4N A; 
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