1JXCA

Minimized nmr structure of att, an arabidopsis trypsin/chymotrypsin inhibitor
Total Genus 7

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
68
structure length
68
Chain Sequence
CPEIEAQGNECLKEYGGDVGFGFCAPRIFPTICYTRCRENKGAKGGRCRWGQGSNVKCLCDFCGDTPQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
O1 (3-5)S1 (14-15)S3 (58-61)TIV3 (19-22)TIV4 (20-23)O3 (11-63)TIV6 (25-28)AH1 (32-40)TIV7 (40-43)O2 (66-68)S2 (45-48)Updating...
connected with : NaN
molecule tags Hydrolase inhibitor
source organism Arabidopsis thaliana
publication title NMR Solution Structure of ATTp, an Arabidopsis thaliana Trypsin Inhibitor
pubmed doi rcsb
molecule keywords Putative trypsin inhibitor ATTI-2
total genus 7
structure length 68
sequence length 68
ec nomenclature
pdb deposition date 2001-09-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1jxcA00
2SN3A 2GL1A 1SNBA 1T1TA 2N2QA 1I2UA 2E0HA 2YC1C 1T0ZA 2LY6A 3E7RL 2LR3A 2KYQA 1B3CA 1GPTA 1C56A 1ZVEA 2B68A 1ZUTA 1VNBA 2ASCA 1AHOA 1LQQA 1PE4A 2YBRC 2KBHA 2LT8A 4KYPA 4HE7A 1ZYWA 1T7EA 1AYJA 2N2RA 1OZZA 1BMRA 1WMTA 2LY5A 4HHFA 1P0AA 1CN2A 2KSKA 2M8BB 2A7TA 1C55A 1NH5A 4UJ0A 2E3FA 2KJAA 4V1DC 2KGQA 2LJMA 2ATBA 1SN1A 1WT7A 5KK4A 2NY9X 4CQKA 4AAZA 1NRBA 1JKZA 1NRAA 2MZ0A 1T7AA 2KBJA 2KBKA 4AEIA 1JXCA 1GPSA 1SEGA 1N4NA 1I2VA 1ZU3A 1ZVGA 2BRZA 3E7UX 1I6GA 1JZBA 1NPIA 1VNAA 5CY0A 1B7DA 1BCGA 1BK8A 2LKBA 2N69A 1PTXA 1MYNA 2YEOA 1ICAA 1KV0A 1NE5A 1DQ7A 1MR4A 1SN4A 2NY8X 4AB0A 1FH3A 1JZAA 1LQHA 2N66A 2B3CA 1DJTA 1I6FA 1WWNA 1P00A 1BRZA 1L4VA 2E3GA 1ZYVA 2KPYA 1T7BA 1LQIA 1OMYA 1PX9A 2I61A 2LI7A 2LJ7A 1TI5A 1ZFUA 1CHZA 3PSMA
chains in the Genus database with same CATH superfamily
2QWNA 3GKUA 3KP0A 1NGFA 5EVZA 3FE1A 3KOWA 2V7ZA 2SN3A 2GL1A 4UAFE 1SNBA 5EXWA 5FPMA 5AQNA 1HX1A 1T1TA 3QFPA 2N2QA 1I2UA 2MN5A 1ATRA 2E0HA 2YC1C 3LDQA 3LDNA 1T0ZA 3KP1A 2JDQD 3QI7A 2LY6A 3E7RL 1BUPA 3BK3C 1DKGD 3D2EA 5BN8A 2LR3A 5AQLA 2KYQA 5AQMA 5FPDA 1B3CA 5F0XA 5AQZA 1GPTA 1C56A 3ATUA 2QWPA 1ATSA 1ZVEA 1NGBA 2B68A 1FH3A 1QQNA 1ZUTA 1KAYA 1BA1A 1VNBA 3KOZA 1AHOA 2ASCA 3KOYA 5EX5A 1LQQA 2E88A 3C7NA 1PE4A 3CQXA 2QXLA 1QQMA 2YBRC 5AQSA 3HSCA 5AQYA 2KBHA 3FZFA 2LT8A 2QWQA 4H5RA 2K35A 5FPEA 3KVGA 4KYPA 5AQPA 4HE7A 1ZYWA 1T7EA 1AYJA 2N2RA 1NGJA 1OZZA 3AY9A 3LDPA 1WMTA 1XRSB 2LY5A 2QWMA 4HHFA 5AQGA 1BMRA 4H5TA 3L56A 1P0AA 1CN2A 2KSKA 2QW9A 4UADE 2M8BB 3R2VA 5AQRA 2LN8A 4KBOA 3GL1A 2A7TA 4HWIA 1C55A 4GNIA 1NH5A 4UJ0A 1NGGA 2E3FA 2KJAA 5AQFA 5BN9A 2VY6A 1YUWA 1NGEA 4IO8A 4V1DC 1BA0A 2KGQA 2LJMA 2ATBA 1NGHA 1SN1A 1WT7A 2QWLA 1KAXA 3A8YA 5AQHA 5KK4A 2NY9X 4CQKA 4AAZA 1NRBA 1JKZA 2YIOA 1NRAA 2E8AA 2MZ0A 1T7AA 3L4IA 2KBJA 3D2FA 2KBKA 2YILA 4AEIA 1JXCA 2D56A 1GPSA 1S3XA 1SEGA 1N4NA 1I2VA 1ZU3A 1ZVGA 3FZHA 3I33A 2E2FA 2BRZA 3E7UX 3IUCA 3JXUA 3ATVA 1JZBA 1NPIA 1I6GA 1VNAA 5CY0A 1B7DA 1BCGA 3QMLA 4H5NA 1BK8A 2G2KA 4UAEF 2LKBA 2N69A 5EY4A 1UGLA 4H5VA 5AQUA 5F1XA 2KHOA 1PTXA 1MYNA 1NGCA 2YEOA 3KC6A 1ICAA 2BUPA 3D2EB 5AQJA 5BPMA 1NGAA 1KV0A 3CW4A 1NE5A 3L6QA 1DQ7A 1HJOA 1MR4A 1SN4A 2MBKA 2NY8X 3KHWA 3FZKA 4AB0A 1JZAA 1HPMA 3FZLA 1LQHA 2N66A 4H5WA 4FL9A 2B3CA 5AQXA 5AQVA 1NGDA 3GDQA 5BPNA 1K8BA 1DJTA 5AQQA 5AQKA 3SF4D 3QFUA 1I6FA 1WWNA 1KAZA 1P00A 3C7NB 5AQWA 1BRZA 1L4VA 5AQTA 2E3GA 1ZYVA 2KPYA 2YIPA 1NGIA 2QWRA 3KOXA 3LDOA 3M3ZA 1T7BA 1LQIA 4FSVA 5AR0A 1OMYA 1PX9A 1QQOA 2GMOA 2I61A 2LI7A 2LJ7A 3D2FB 5AQOA 1POIA 1TI5A 5FPNA 1ZFUA 5F2RA 2QWOA 1CHZA 3PSMA 5BPLA 3FZMA 3LDLA 5AQIA
chains in the Genus database with same CATH topology
2SN3A 2GL1A 1SNBA 1T1TA 2N2QA 1I2UA 2E0HA 2YC1C 1T0ZA 2LY6A 3E7RL 2LR3A 2KYQA 1B3CA 1GPTA 1C56A 1ZVEA 2B68A 1ZUTA 1VNBA 2ASCA 1AHOA 1LQQA 1PE4A 2YBRC 2KBHA 2LT8A 4KYPA 4HE7A 1ZYWA 1T7EA 1AYJA 2N2RA 1OZZA 1BMRA 1WMTA 2LY5A 4HHFA 1P0AA 1CN2A 2KSKA 2M8BB 2A7TA 1C55A 1NH5A 4UJ0A 2E3FA 2KJAA 4V1DC 2KGQA 2LJMA 2ATBA 1SN1A 1WT7A 5KK4A 2NY9X 4CQKA 4AAZA 1NRBA 1JKZA 1NRAA 2MZ0A 1T7AA 2KBJA 2KBKA 4AEIA 1JXCA 1GPSA 1SEGA 1N4NA 1I2VA 1ZU3A 1ZVGA 2BRZA 3E7UX 1I6GA 1JZBA 1NPIA 1VNAA 5CY0A 1B7DA 1BCGA 1BK8A 2LKBA 2N69A 1PTXA 1MYNA 2YEOA 1ICAA 1KV0A 1NE5A 1DQ7A 1MR4A 1SN4A 2NY8X 4AB0A 1FH3A 1JZAA 1LQHA 2N66A 2B3CA 1DJTA 1I6FA 1WWNA 1P00A 1BRZA 1L4VA 2E3GA 1ZYVA 2KPYA 1T7BA 1LQIA 1OMYA 1PX9A 2I61A 2LI7A 2LJ7A 1TI5A 1ZFUA 1CHZA 3PSMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2SN3 A;  2GL1 A;  1SNB A;  1T1T A;  2N2Q A;  1I2U A;  2E0H A;  2YC1 C;  1T0Z A;  2LY6 A;  3E7R L;  2LR3 A;  2KYQ A;  1B3C A;  1GPT A;  1C56 A;  1ZVE A;  2B68 A;  1ZUT A;  1VNB A;  2ASC A;  1AHO A;  1LQQ A;  1PE4 A;  2YBR C;  2KBH A;  2LT8 A;  4KYP A;  4HE7 A;  1ZYW A;  1T7E A;  1AYJ A;  2N2R A;  1OZZ A;  1BMR A;  1WMT A;  2LY5 A;  4HHF A;  1P0A A;  1CN2 A;  2KSK A;  2M8B B;  2A7T A;  1C55 A;  1NH5 A;  4UJ0 A;  2E3F A;  2KJA A;  4V1D C;  2KGQ A;  2LJM A;  2ATB A;  1SN1 A;  1WT7 A;  5KK4 A;  2NY9 X;  4CQK A;  4AAZ A;  1NRB A;  1JKZ A;  1NRA A;  2MZ0 A;  1T7A A;  2KBJ A;  2KBK A;  4AEI A;  1JXC A;  1GPS A;  1SEG A;  1N4N A;  1I2V A;  1ZU3 A;  1ZVG A;  2BRZ A;  3E7U X;  1I6G A;  1JZB A;  1NPI A;  1VNA A;  5CY0 A;  1B7D A;  1BCG A;  1BK8 A;  2LKB A;  2N69 A;  1PTX A;  1MYN A;  2YEO A;  1ICA A;  1KV0 A;  1NE5 A;  1DQ7 A;  1MR4 A;  1SN4 A;  2NY8 X;  4AB0 A;  1FH3 A;  1JZA A;  1LQH A;  2N66 A;  2B3C A;  1DJT A;  1I6F A;  1WWN A;  1P00 A;  1BRZ A;  1L4V A;  2E3G A;  1ZYV A;  2KPY A;  1T7B A;  1LQI A;  1OMY A;  1PX9 A;  2I61 A;  2LI7 A;  2LJ7 A;  1TI5 A;  1ZFU A;  1CHZ A;  3PSM A; 
#chains in the Genus database with same CATH topology
 2QWN A;  3GKU A;  3KP0 A;  1NGF A;  5EVZ A;  3FE1 A;  3KOW A;  2V7Z A;  2SN3 A;  2GL1 A;  4UAF E;  1SNB A;  5EXW A;  5FPM A;  5AQN A;  1HX1 A;  1T1T A;  3QFP A;  2N2Q A;  1I2U A;  2MN5 A;  1ATR A;  2E0H A;  2YC1 C;  3LDQ A;  3LDN A;  1T0Z A;  3KP1 A;  2JDQ D;  3QI7 A;  2LY6 A;  3E7R L;  1BUP A;  3BK3 C;  1DKG D;  3D2E A;  5BN8 A;  2LR3 A;  5AQL A;  2KYQ A;  5AQM A;  5FPD A;  1B3C A;  5F0X A;  5AQZ A;  1GPT A;  1C56 A;  3ATU A;  2QWP A;  1ATS A;  1ZVE A;  1NGB A;  2B68 A;  1FH3 A;  1QQN A;  1ZUT A;  1KAY A;  1BA1 A;  1VNB A;  3KOZ A;  1AHO A;  2ASC A;  3KOY A;  5EX5 A;  1LQQ A;  2E88 A;  3C7N A;  1PE4 A;  3CQX A;  2QXL A;  1QQM A;  2YBR C;  5AQS A;  3HSC A;  5AQY A;  2KBH A;  3FZF A;  2LT8 A;  2QWQ A;  4H5R A;  2K35 A;  5FPE A;  3KVG A;  4KYP A;  5AQP A;  4HE7 A;  1ZYW A;  1T7E A;  1AYJ A;  2N2R A;  1NGJ A;  1OZZ A;  3AY9 A;  3LDP A;  1WMT A;  1XRS B;  2LY5 A;  2QWM A;  4HHF A;  5AQG A;  1BMR A;  4H5T A;  3L56 A;  1P0A A;  1CN2 A;  2KSK A;  2QW9 A;  4UAD E;  2M8B B;  3R2V A;  5AQR A;  2LN8 A;  4KBO A;  3GL1 A;  2A7T A;  4HWI A;  1C55 A;  4GNI A;  1NH5 A;  4UJ0 A;  1NGG A;  2E3F A;  2KJA A;  5AQF A;  5BN9 A;  2VY6 A;  1YUW A;  1NGE A;  4IO8 A;  4V1D C;  1BA0 A;  2KGQ A;  2LJM A;  2ATB A;  1NGH A;  1SN1 A;  1WT7 A;  2QWL A;  1KAX A;  3A8Y A;  5AQH A;  5KK4 A;  2NY9 X;  4CQK A;  4AAZ A;  1NRB A;  1JKZ A;  2YIO A;  1NRA A;  2E8A A;  2MZ0 A;  1T7A A;  3L4I A;  2KBJ A;  3D2F A;  2KBK A;  2YIL A;  4AEI A;  1JXC A;  2D56 A;  1GPS A;  1S3X A;  1SEG A;  1N4N A;  1I2V A;  1ZU3 A;  1ZVG A;  3FZH A;  3I33 A;  2E2F A;  2BRZ A;  3E7U X;  3IUC A;  3JXU A;  3ATV A;  1JZB A;  1NPI A;  1I6G A;  1VNA A;  5CY0 A;  1B7D A;  1BCG A;  3QML A;  4H5N A;  1BK8 A;  2G2K A;  4UAE F;  2LKB A;  2N69 A;  5EY4 A;  1UGL A;  4H5V A;  5AQU A;  5F1X A;  2KHO A;  1PTX A;  1MYN A;  1NGC A;  2YEO A;  3KC6 A;  1ICA A;  2BUP A;  3D2E B;  5AQJ A;  5BPM A;  1NGA A;  1KV0 A;  3CW4 A;  1NE5 A;  3L6Q A;  1DQ7 A;  1HJO A;  1MR4 A;  1SN4 A;  2MBK A;  2NY8 X;  3KHW A;  3FZK A;  4AB0 A;  1JZA A;  1HPM A;  3FZL A;  1LQH A;  2N66 A;  4H5W A;  4FL9 A;  2B3C A;  5AQX A;  5AQV A;  1NGD A;  3GDQ A;  5BPN A;  1K8B A;  1DJT A;  5AQQ A;  5AQK A;  3SF4 D;  3QFU A;  1I6F A;  1WWN A;  1KAZ A;  1P00 A;  3C7N B;  5AQW A;  1BRZ A;  1L4V A;  5AQT A;  2E3G A;  1ZYV A;  2KPY A;  2YIP A;  1NGI A;  2QWR A;  3KOX A;  3LDO A;  3M3Z A;  1T7B A;  1LQI A;  4FSV A;  5AR0 A;  1OMY A;  1PX9 A;  1QQO A;  2GMO A;  2I61 A;  2LI7 A;  2LJ7 A;  3D2F B;  5AQO A;  1POI A;  1TI5 A;  5FPN A;  1ZFU A;  5F2R A;  2QWO A;  1CHZ A;  3PSM A;  5BPL A;  3FZM A;  3LDL A;  5AQI A; 
#chains in the Genus database with same CATH homology
 2SN3 A;  2GL1 A;  1SNB A;  1T1T A;  2N2Q A;  1I2U A;  2E0H A;  2YC1 C;  1T0Z A;  2LY6 A;  3E7R L;  2LR3 A;  2KYQ A;  1B3C A;  1GPT A;  1C56 A;  1ZVE A;  2B68 A;  1ZUT A;  1VNB A;  2ASC A;  1AHO A;  1LQQ A;  1PE4 A;  2YBR C;  2KBH A;  2LT8 A;  4KYP A;  4HE7 A;  1ZYW A;  1T7E A;  1AYJ A;  2N2R A;  1OZZ A;  1BMR A;  1WMT A;  2LY5 A;  4HHF A;  1P0A A;  1CN2 A;  2KSK A;  2M8B B;  2A7T A;  1C55 A;  1NH5 A;  4UJ0 A;  2E3F A;  2KJA A;  4V1D C;  2KGQ A;  2LJM A;  2ATB A;  1SN1 A;  1WT7 A;  5KK4 A;  2NY9 X;  4CQK A;  4AAZ A;  1NRB A;  1JKZ A;  1NRA A;  2MZ0 A;  1T7A A;  2KBJ A;  2KBK A;  4AEI A;  1JXC A;  1GPS A;  1SEG A;  1N4N A;  1I2V A;  1ZU3 A;  1ZVG A;  2BRZ A;  3E7U X;  1I6G A;  1JZB A;  1NPI A;  1VNA A;  5CY0 A;  1B7D A;  1BCG A;  1BK8 A;  2LKB A;  2N69 A;  1PTX A;  1MYN A;  2YEO A;  1ICA A;  1KV0 A;  1NE5 A;  1DQ7 A;  1MR4 A;  1SN4 A;  2NY8 X;  4AB0 A;  1FH3 A;  1JZA A;  1LQH A;  2N66 A;  2B3C A;  1DJT A;  1I6F A;  1WWN A;  1P00 A;  1BRZ A;  1L4V A;  2E3G A;  1ZYV A;  2KPY A;  1T7B A;  1LQI A;  1OMY A;  1PX9 A;  2I61 A;  2LI7 A;  2LJ7 A;  1TI5 A;  1ZFU A;  1CHZ A;  3PSM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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