1WWNA

Nmr solution structure of bmk-betait, an excitatory scorpion toxin from buthus martensi karsch
Total Genus 22

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
69
structure length
69
Chain Sequence
KKNGYAVDSSGKVSECLLNNYCNNICTKVYYATSGYCCLLSCYCFGLDDDKAVLKIKDATKSYCDVQII

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYO1 (16-37)TIV8 (47-50)S1 (2-5)TIV7 (44-47)S2 (34-38)O4 (38-64)TIV1 (7-10)TIV3 (9-12)AH1 (19-30)TIV4 (16-19)S3 (41-46)TIV9 (50-53)AH2 (58-64)TIV5 (37-40)TIV10 (64-67)TIV11 (65-68)Updating...
connected with : NaN
molecule tags Toxin
publication title NMR solution structure of BmK-betaIT, an excitatory scorpion beta-toxin without a 'hot spot' at the relevant position
pubmed doi rcsb
molecule keywords Excitatory insect selective toxin 1
total genus 22
structure length 69
sequence length 69
ec nomenclature
pdb deposition date 2005-01-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1wwnA00
1ZYVA 1NH5A 4KYPA 1AHOA 2M8BB 2NY9X 2KBHA 2A7TA 1C55A 2LKBA 1SN1A 1MYNA 1PX9A 2ATBA 3E7UX 4HHFA 2E3GA 4AEIA 1MR4A 1N4NA 1NPIA 2LJ7A 4UJ0A 2KJAA 1SNBA 1T0ZA 1BCGA 1I6FA 1BRZA 4HE7A 1P00A 1T7EA 2LY5A 2KPYA 1GPSA 1DJTA 2LR3A 1ICAA 4AAZA 1L4VA 1LQIA 1PTXA 2MZ0A 3E7RL 2YEOA 1C56A 1ZVEA 1SN4A 2SN3A 2LJMA 1TI5A 3PSMA 2N69A 2KYQA 1B7DA 1KV0A 1SEGA 1I2VA 1ZYWA 1P0AA 2B3CA 1JKZA 2YC1C 1BMRA 5CY0A 2NY8X 1LQHA 2KBKA 2KGQA 2LI7A 2LY6A 1LQQA 1ZVGA 2YBRC 1JZAA 1JZBA 1JXCA 1NE5A 2B68A 1BK8A 1I6GA 1OMYA 2N2RA 1I2UA 1B3CA 2E3FA 2BRZA 4AB0A 1VNAA 1NRAA 2GL1A 2I61A 2ASCA 1DQ7A 1FH3A 1WMTA 4V1DC 1T7AA 2KSKA 4CQKA 1T1TA 2N2QA 1ZUTA 1OZZA 1NRBA 1ZU3A 2E0HA 2LT8A 1PE4A 1T7BA 2N66A 1WT7A 1VNBA 1GPTA 1AYJA 5KK4A 2KBJA 1ZFUA 1CN2A 1CHZA 1WWNA
chains in the Genus database with same CATH superfamily
3KOWA 3ATUA 1HPMA 1ZYVA 1NH5A 2D56A 1NGEA 3I33A 5EX5A 1NGFA 4KYPA 4H5RA 1AHOA 2M8BB 2NY9X 3CQXA 1NGAA 2KBHA 2A7TA 1BA1A 3M3ZA 3CW4A 1C55A 4H5VA 5FPEA 2LKBA 1SN1A 1MYNA 1PX9A 2ATBA 3E7UX 3KOYA 4HHFA 2E3GA 5AQPA 5FPMA 3GDQA 5FPNA 4AEIA 1BRZA 2E8AA 1MR4A 1S3XA 2VY6A 3LDQA 1N4NA 1NPIA 2E88A 2LJ7A 3KP0A 4UAFE 4UJ0A 2KJAA 3LDPA 1SNBA 1T0ZA 1NGGA 1BCGA 1DKGD 1I6FA 1KAZA 2K35A 2KHOA 2QXLA 3IUCA 1P00A 4HE7A 1QQNA 5AQWA 1BUPA 1T7EA 5AQKA 5BPMA 5AQSA 1POIA 5AQZA 2LY5A 2KPYA 3FE1A 1GPSA 1DJTA 3FZMA 2LR3A 3D2EB 1ICAA 2GMOA 5AQMA 4AAZA 1NGDA 5EVZA 2MBKA 1L4VA 1LQIA 1PTXA 3D2EA 2MZ0A 2QWLA 3E7RL 5F1XA 1NGHA 1NGIA 2YEOA 2BUPA 5AQRA 1C56A 4KBOA 1ZVEA 1SN4A 2SN3A 2LJMA 1TI5A 3PSMA 4FSVA 2N69A 1B7DA 2KYQA 1KV0A 1SEGA 3KVGA 3A8YA 3L4IA 2YILA 1I2VA 1XRSB 5EY4A 2LN8A 1ZYWA 3GKUA 1HJOA 3LDNA 3FZFA 5AQIA 4HWIA 1P0AA 4H5NA 2B3CA 1JKZA 5AQYA 2QWPA 2YC1C 3R2VA 1KAXA 5AQVA 4UAEF 1BMRA 3BK3C 5CY0A 3C7NB 2NY8X 1LQHA 5FPDA 3L6QA 4H5WA 3LDOA 3FZKA 3D2FB 5AQFA 5AQNA 3AY9A 2KBKA 3QFUA 2QW9A 1QQMA 2KGQA 2LI7A 3D2FA 5AQGA 5BN9A 2LY6A 1LQQA 1K8BA 1ZVGA 2QWNA 2YBRC 1JZAA 1JZBA 2QWOA 1JXCA 1ATSA 1NE5A 3KOXA 5AQHA 1ATRA 2B68A 5BN8A 1BK8A 1I6GA 1OMYA 2N2RA 1I2UA 1B3CA 1UGLA 4H5TA 5AQTA 2E3FA 5AQOA 2MN5A 3FZHA 2BRZA 4AB0A 1VNAA 1NRAA 2GL1A 5EXWA 2I61A 2ASCA 3SF4D 5AR0A 1DQ7A 2JDQD 2QWMA 4IO8A 1FH3A 1WMTA 3ATVA 3QFPA 4V1DC 1T7AA 5AQXA 5AQQA 2KSKA 4CQKA 3KHWA 4FL9A 1NGCA 3FZLA 3C7NA 1T1TA 2QWQA 2N2QA 3HSCA 3KOZA 2QWRA 5AQLA 1ZUTA 1HX1A 1OZZA 1KAYA 1NRBA 1ZU3A 4GNIA 4UADE 5AQUA 2E0HA 1QQOA 1PE4A 2LT8A 3KP1A 3LDLA 1YUWA 1T7BA 3QI7A 1NGBA 2E2FA 5F2RA 2N66A 3QMLA 1NGJA 1WT7A 1VNBA 3KC6A 5BPLA 1GPTA 2G2KA 5BPNA 5AQJA 3JXUA 3L56A 1AYJA 2V7ZA 5KK4A 2KBJA 2YIPA 5F0XA 3GL1A 2YIOA 1ZFUA 1CN2A 1CHZA 1WWNA 1BA0A
chains in the Genus database with same CATH topology
1ZYVA 1NH5A 4KYPA 1AHOA 2M8BB 2NY9X 2KBHA 2A7TA 1C55A 2LKBA 1SN1A 1MYNA 1PX9A 2ATBA 3E7UX 4HHFA 2E3GA 4AEIA 1MR4A 1N4NA 1NPIA 2LJ7A 4UJ0A 2KJAA 1SNBA 1T0ZA 1BCGA 1I6FA 1BRZA 4HE7A 1P00A 1T7EA 2LY5A 2KPYA 1GPSA 1DJTA 2LR3A 1ICAA 4AAZA 1L4VA 1LQIA 1PTXA 2MZ0A 3E7RL 2YEOA 1C56A 1ZVEA 1SN4A 2SN3A 2LJMA 1TI5A 3PSMA 2N69A 2KYQA 1B7DA 1KV0A 1SEGA 1I2VA 1ZYWA 1P0AA 2B3CA 1JKZA 2YC1C 1BMRA 5CY0A 2NY8X 1LQHA 2KBKA 2KGQA 2LI7A 2LY6A 1LQQA 1ZVGA 2YBRC 1JZAA 1JZBA 1JXCA 1NE5A 2B68A 1BK8A 1I6GA 1OMYA 2N2RA 1I2UA 1B3CA 2E3FA 2BRZA 4AB0A 1VNAA 1NRAA 2GL1A 2I61A 2ASCA 1DQ7A 1FH3A 1WMTA 4V1DC 1T7AA 2KSKA 4CQKA 1T1TA 2N2QA 1ZUTA 1OZZA 1NRBA 1ZU3A 2E0HA 2LT8A 1PE4A 1T7BA 2N66A 1WT7A 1VNBA 1GPTA 1AYJA 5KK4A 2KBJA 1ZFUA 1CN2A 1CHZA 1WWNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZYV A;  1NH5 A;  4KYP A;  1AHO A;  2M8B B;  2NY9 X;  2KBH A;  2A7T A;  1C55 A;  2LKB A;  1SN1 A;  1MYN A;  1PX9 A;  2ATB A;  3E7U X;  4HHF A;  2E3G A;  4AEI A;  1MR4 A;  1N4N A;  1NPI A;  2LJ7 A;  4UJ0 A;  2KJA A;  1SNB A;  1T0Z A;  1BCG A;  1I6F A;  1BRZ A;  4HE7 A;  1P00 A;  1T7E A;  2LY5 A;  2KPY A;  1GPS A;  1DJT A;  2LR3 A;  1ICA A;  4AAZ A;  1L4V A;  1LQI A;  1PTX A;  2MZ0 A;  3E7R L;  2YEO A;  1C56 A;  1ZVE A;  1SN4 A;  2SN3 A;  2LJM A;  1TI5 A;  3PSM A;  2N69 A;  2KYQ A;  1B7D A;  1KV0 A;  1SEG A;  1I2V A;  1ZYW A;  1P0A A;  2B3C A;  1JKZ A;  2YC1 C;  1BMR A;  5CY0 A;  2NY8 X;  1LQH A;  2KBK A;  2KGQ A;  2LI7 A;  2LY6 A;  1LQQ A;  1ZVG A;  2YBR C;  1JZA A;  1JZB A;  1JXC A;  1NE5 A;  2B68 A;  1BK8 A;  1I6G A;  1OMY A;  2N2R A;  1I2U A;  1B3C A;  2E3F A;  2BRZ A;  4AB0 A;  1VNA A;  1NRA A;  2GL1 A;  2I61 A;  2ASC A;  1DQ7 A;  1FH3 A;  1WMT A;  4V1D C;  1T7A A;  2KSK A;  4CQK A;  1T1T A;  2N2Q A;  1ZUT A;  1OZZ A;  1NRB A;  1ZU3 A;  2E0H A;  2LT8 A;  1PE4 A;  1T7B A;  2N66 A;  1WT7 A;  1VNB A;  1GPT A;  1AYJ A;  5KK4 A;  2KBJ A;  1ZFU A;  1CN2 A;  1CHZ A;  1WWN A; 
#chains in the Genus database with same CATH topology
 3KOW A;  3ATU A;  1HPM A;  1ZYV A;  1NH5 A;  2D56 A;  1NGE A;  3I33 A;  5EX5 A;  1NGF A;  4KYP A;  4H5R A;  1AHO A;  2M8B B;  2NY9 X;  3CQX A;  1NGA A;  2KBH A;  2A7T A;  1BA1 A;  3M3Z A;  3CW4 A;  1C55 A;  4H5V A;  5FPE A;  2LKB A;  1SN1 A;  1MYN A;  1PX9 A;  2ATB A;  3E7U X;  3KOY A;  4HHF A;  2E3G A;  5AQP A;  5FPM A;  3GDQ A;  5FPN A;  4AEI A;  1BRZ A;  2E8A A;  1MR4 A;  1S3X A;  2VY6 A;  3LDQ A;  1N4N A;  1NPI A;  2E88 A;  2LJ7 A;  3KP0 A;  4UAF E;  4UJ0 A;  2KJA A;  3LDP A;  1SNB A;  1T0Z A;  1NGG A;  1BCG A;  1DKG D;  1I6F A;  1KAZ A;  2K35 A;  2KHO A;  2QXL A;  3IUC A;  1P00 A;  4HE7 A;  1QQN A;  5AQW A;  1BUP A;  1T7E A;  5AQK A;  5BPM A;  5AQS A;  1POI A;  5AQZ A;  2LY5 A;  2KPY A;  3FE1 A;  1GPS A;  1DJT A;  3FZM A;  2LR3 A;  3D2E B;  1ICA A;  2GMO A;  5AQM A;  4AAZ A;  1NGD A;  5EVZ A;  2MBK A;  1L4V A;  1LQI A;  1PTX A;  3D2E A;  2MZ0 A;  2QWL A;  3E7R L;  5F1X A;  1NGH A;  1NGI A;  2YEO A;  2BUP A;  5AQR A;  1C56 A;  4KBO A;  1ZVE A;  1SN4 A;  2SN3 A;  2LJM A;  1TI5 A;  3PSM A;  4FSV A;  2N69 A;  1B7D A;  2KYQ A;  1KV0 A;  1SEG A;  3KVG A;  3A8Y A;  3L4I A;  2YIL A;  1I2V A;  1XRS B;  5EY4 A;  2LN8 A;  1ZYW A;  3GKU A;  1HJO A;  3LDN A;  3FZF A;  5AQI A;  4HWI A;  1P0A A;  4H5N A;  2B3C A;  1JKZ A;  5AQY A;  2QWP A;  2YC1 C;  3R2V A;  1KAX A;  5AQV A;  4UAE F;  1BMR A;  3BK3 C;  5CY0 A;  3C7N B;  2NY8 X;  1LQH A;  5FPD A;  3L6Q A;  4H5W A;  3LDO A;  3FZK A;  3D2F B;  5AQF A;  5AQN A;  3AY9 A;  2KBK A;  3QFU A;  2QW9 A;  1QQM A;  2KGQ A;  2LI7 A;  3D2F A;  5AQG A;  5BN9 A;  2LY6 A;  1LQQ A;  1K8B A;  1ZVG A;  2QWN A;  2YBR C;  1JZA A;  1JZB A;  2QWO A;  1JXC A;  1ATS A;  1NE5 A;  3KOX A;  5AQH A;  1ATR A;  2B68 A;  5BN8 A;  1BK8 A;  1I6G A;  1OMY A;  2N2R A;  1I2U A;  1B3C A;  1UGL A;  4H5T A;  5AQT A;  2E3F A;  5AQO A;  2MN5 A;  3FZH A;  2BRZ A;  4AB0 A;  1VNA A;  1NRA A;  2GL1 A;  5EXW A;  2I61 A;  2ASC A;  3SF4 D;  5AR0 A;  1DQ7 A;  2JDQ D;  2QWM A;  4IO8 A;  1FH3 A;  1WMT A;  3ATV A;  3QFP A;  4V1D C;  1T7A A;  5AQX A;  5AQQ A;  2KSK A;  4CQK A;  3KHW A;  4FL9 A;  1NGC A;  3FZL A;  3C7N A;  1T1T A;  2QWQ A;  2N2Q A;  3HSC A;  3KOZ A;  2QWR A;  5AQL A;  1ZUT A;  1HX1 A;  1OZZ A;  1KAY A;  1NRB A;  1ZU3 A;  4GNI A;  4UAD E;  5AQU A;  2E0H A;  1QQO A;  1PE4 A;  2LT8 A;  3KP1 A;  3LDL A;  1YUW A;  1T7B A;  3QI7 A;  1NGB A;  2E2F A;  5F2R A;  2N66 A;  3QML A;  1NGJ A;  1WT7 A;  1VNB A;  3KC6 A;  5BPL A;  1GPT A;  2G2K A;  5BPN A;  5AQJ A;  3JXU A;  3L56 A;  1AYJ A;  2V7Z A;  5KK4 A;  2KBJ A;  2YIP A;  5F0X A;  3GL1 A;  2YIO A;  1ZFU A;  1CN2 A;  1CHZ A;  1WWN A;  1BA0 A; 
#chains in the Genus database with same CATH homology
 1ZYV A;  1NH5 A;  4KYP A;  1AHO A;  2M8B B;  2NY9 X;  2KBH A;  2A7T A;  1C55 A;  2LKB A;  1SN1 A;  1MYN A;  1PX9 A;  2ATB A;  3E7U X;  4HHF A;  2E3G A;  4AEI A;  1MR4 A;  1N4N A;  1NPI A;  2LJ7 A;  4UJ0 A;  2KJA A;  1SNB A;  1T0Z A;  1BCG A;  1I6F A;  1BRZ A;  4HE7 A;  1P00 A;  1T7E A;  2LY5 A;  2KPY A;  1GPS A;  1DJT A;  2LR3 A;  1ICA A;  4AAZ A;  1L4V A;  1LQI A;  1PTX A;  2MZ0 A;  3E7R L;  2YEO A;  1C56 A;  1ZVE A;  1SN4 A;  2SN3 A;  2LJM A;  1TI5 A;  3PSM A;  2N69 A;  2KYQ A;  1B7D A;  1KV0 A;  1SEG A;  1I2V A;  1ZYW A;  1P0A A;  2B3C A;  1JKZ A;  2YC1 C;  1BMR A;  5CY0 A;  2NY8 X;  1LQH A;  2KBK A;  2KGQ A;  2LI7 A;  2LY6 A;  1LQQ A;  1ZVG A;  2YBR C;  1JZA A;  1JZB A;  1JXC A;  1NE5 A;  2B68 A;  1BK8 A;  1I6G A;  1OMY A;  2N2R A;  1I2U A;  1B3C A;  2E3F A;  2BRZ A;  4AB0 A;  1VNA A;  1NRA A;  2GL1 A;  2I61 A;  2ASC A;  1DQ7 A;  1FH3 A;  1WMT A;  4V1D C;  1T7A A;  2KSK A;  4CQK A;  1T1T A;  2N2Q A;  1ZUT A;  1OZZ A;  1NRB A;  1ZU3 A;  2E0H A;  2LT8 A;  1PE4 A;  1T7B A;  2N66 A;  1WT7 A;  1VNB A;  1GPT A;  1AYJ A;  5KK4 A;  2KBJ A;  1ZFU A;  1CN2 A;  1CHZ A;  1WWN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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