1FH3A

Nmr structures of lqh iii alpha-like scorpion toxin from leiurus quinquestriatus corresponding to the major conformer in solution
Total Genus 14
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
67
structure length
67
Chain Sequence
VRDGYIAQPENCVYHCFPGSSGCDTLCKEKGGTSGHCGFKVGHGLACWCNALPDNVGIIVEGEKCHS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords LQH III ALPHA-LIKE TOXIN
publication title A Cis-trans Isomerism of a Non-prolyl Peptide Bond in Lqh III Alpha-like Scorpion Toxin Revealed by Solution NMR
rcsb
total genus 14
structure length 67
sequence length 67
ec nomenclature
pdb deposition date 2000-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1fh3A00
1MYNA 1T1TA 2E3FA 2GL1A 1BK8A 1LQQA 2SN3A 1WMTA 2B3CA 1P0AA 2E0HA 5CY0A 2LY5A 4AB0A 1SNBA 1ZYVA 1SN4A 2LY6A 4HE7A 1I2VA 4AAZA 2KBJA 1ZYWA 1C56A 1ZVGA 2N2RA 1KV0A 1OMYA 2YC1C 2LI7A 2ASCA 2KJAA 1MR4A 2B68A 1TI5A 1PX9A 1PE4A 1JXCA 1T7EA 1ICAA 2E3GA 2N2QA 1ZFUA 2N66A 1AHOA 1B3CA 1I6GA 5KK4A 1DQ7A 1JZAA 1OZZA 2A7TA 1BMRA 1NRBA 1WT7A 4CQKA 1CN2A 2LJ7A 1GPSA 2KYQA 1DJTA 1VNBA 1VNAA 2KGQA 2KPYA 4UJ0A 1NPIA 1LQHA 1P00A 2LT8A 2I61A 4AEIA 1LQIA 2LKBA 1AYJA 3PSMA 1CHZA 1ZUTA 2LJMA 1T7BA 1ZU3A 2KSKA 2NY8X 2MZ0A 2NY9X 2ATBA 1N4NA 1L4VA 1FH3A 1PTXA 1JZBA 1ZVEA 3E7RL 2LR3A 1T7AA 1NH5A 1BCGA 1SEGA 1I6FA 2M8BB 1JKZA 2KBKA 2KBHA 1B7DA 1NE5A 2YEOA 1GPTA 4HHFA 4V1DC 1SN1A 2YBRC 1WWNA 3E7UX 1T0ZA 1I2UA 1BRZA 4KYPA 1NRAA 2BRZA 2N69A 1C55A
chains in the Genus database with same CATH superfamily
2E88A 1MYNA 1T1TA 2E3FA 2GL1A 2MN5A 1LQQA 2VY6A 3C7NB 3CW4A 1BK8A 1NGJA 2SN3A 3D2EA 5AQFA 1WMTA 3LDLA 2B3CA 1P0AA 2E0HA 3ATUA 2QWLA 4FSVA 1XRSB 1UGLA 1NGAA 1KAYA 1QQMA 5AQXA 2LY5A 5CY0A 4UADE 3L56A 4AB0A 2QWMA 5F0XA 1SNBA 1BA1A 1POIA 1ZYVA 3LDPA 1SN4A 2QW9A 2LY6A 2YILA 4HE7A 1I2VA 4AAZA 2G2KA 2KBJA 5AR0A 3JXUA 3L4IA 4KBOA 1NGEA 2K35A 3KOWA 1ZYWA 4H5RA 1NGGA 2QWRA 5FPNA 1C56A 3L6QA 1ZVGA 3KP0A 2N2RA 1KV0A 1OMYA 2QWQA 1KAZA 2YC1C 5AQIA 1DKGD 3AY9A 1HX1A 2LI7A 2ASCA 2E8AA 2KJAA 1NGHA 1MR4A 1C55A 4GNIA 4FL9A 2B68A 1TI5A 1PX9A 1PE4A 3FZKA 1JXCA 4UAEF 5AQTA 1T7EA 1ICAA 2E3GA 5AQKA 1BA0A 5EVZA 2N2QA 3KOZA 1ZFUA 2N66A 3D2FB 3QI7A 3GKUA 3KHWA 1AHOA 3C7NA 1B3CA 3KP1A 1I6GA 1K8BA 5KK4A 1DQ7A 1JZAA 4IO8A 1OZZA 2A7TA 5AQZA 1BMRA 3GDQA 5AQQA 1NGDA 1NRBA 5AQVA 1WT7A 4CQKA 1CN2A 3QMLA 2LJ7A 5BPMA 1GPSA 3QFPA 2KYQA 5AQOA 1DJTA 1VNBA 2LN8A 1VNAA 2KGQA 2KPYA 5F2RA 1HPMA 5EY4A 4UJ0A 1YUWA 1KAXA 1NGBA 1NPIA 1LQHA 3KVGA 4H5TA 3IUCA 5AQHA 3CQXA 1P00A 5AQRA 2E2FA 5AQUA 2LT8A 2I61A 1S3XA 2JDQD 3KC6A 2MBKA 5FPMA 4AEIA 1LQIA 2LKBA 3A8YA 1AYJA 5BPLA 1ATSA 3PSMA 5AQWA 3KOYA 5EXWA 3I33A 5AQPA 1CHZA 1ZUTA 2LJMA 1T7BA 1ZU3A 2KSKA 3D2EB 3SF4D 1ATRA 2QWOA 2NY8X 2MZ0A 2NY9X 3LDNA 2ATBA 5AQJA 4UAFE 1N4NA 5AQNA 1L4VA 1FH3A 3LDQA 1PTXA 1JZBA 1ZVEA 2D56A 3E7RL 4H5VA 5AQSA 1NGCA 2LR3A 1T7AA 1NH5A 1NGIA 3QFUA 1BCGA 1SEGA 2QWNA 5FPDA 5F1XA 1I6FA 4H5NA 3LDOA 2BUPA 4HWIA 2GMOA 3FE1A 2M8BB 3KOXA 1JKZA 2KBKA 2KBHA 2KHOA 1B7DA 1NE5A 3FZHA 2YEOA 3BK3C 5BPNA 4HHFA 1GPTA 2YIOA 4V1DC 3GL1A 1HJOA 1BUPA 1SN1A 2YBRC 1WWNA 5AQYA 4H5WA 3E7UX 1NGFA 3R2VA 2QXLA 1T0ZA 3HSCA 3M3ZA 5AQLA 5FPEA 5EX5A 5BN8A 2QWPA 1I2UA 1QQNA 1BRZA 3FZLA 5AQGA 3D2FA 5BN9A 4KYPA 3FZFA 1NRAA 2YIPA 3FZMA 2BRZA 2N69A 1QQOA 5AQMA 3ATVA 2V7ZA
chains in the Genus database with same CATH topology
1MYNA 1T1TA 2E3FA 2GL1A 1BK8A 1LQQA 2SN3A 1WMTA 2B3CA 1P0AA 2E0HA 5CY0A 2LY5A 4AB0A 1SNBA 1ZYVA 1SN4A 2LY6A 4HE7A 1I2VA 4AAZA 2KBJA 1ZYWA 1C56A 1ZVGA 2N2RA 1KV0A 1OMYA 2YC1C 2LI7A 2ASCA 2KJAA 1MR4A 2B68A 1TI5A 1PX9A 1PE4A 1JXCA 1T7EA 1ICAA 2E3GA 2N2QA 1ZFUA 2N66A 1AHOA 1B3CA 1I6GA 5KK4A 1DQ7A 1JZAA 1OZZA 2A7TA 1BMRA 1NRBA 1WT7A 4CQKA 1CN2A 2LJ7A 1GPSA 2KYQA 1DJTA 1VNBA 1VNAA 2KGQA 2KPYA 4UJ0A 1NPIA 1LQHA 1P00A 2LT8A 2I61A 4AEIA 1LQIA 2LKBA 1AYJA 3PSMA 1CHZA 1ZUTA 2LJMA 1T7BA 1ZU3A 2KSKA 2NY8X 2MZ0A 2NY9X 2ATBA 1N4NA 1L4VA 1FH3A 1PTXA 1JZBA 1ZVEA 3E7RL 2LR3A 1T7AA 1NH5A 1BCGA 1SEGA 1I6FA 2M8BB 1JKZA 2KBKA 2KBHA 1B7DA 1NE5A 2YEOA 1GPTA 4HHFA 4V1DC 1SN1A 2YBRC 1WWNA 3E7UX 1T0ZA 1I2UA 1BRZA 4KYPA 1NRAA 2BRZA 2N69A 1C55A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MYN A;  1T1T A;  2E3F A;  2GL1 A;  1BK8 A;  1LQQ A;  2SN3 A;  1WMT A;  2B3C A;  1P0A A;  2E0H A;  5CY0 A;  2LY5 A;  4AB0 A;  1SNB A;  1ZYV A;  1SN4 A;  2LY6 A;  4HE7 A;  1I2V A;  4AAZ A;  2KBJ A;  1ZYW A;  1C56 A;  1ZVG A;  2N2R A;  1KV0 A;  1OMY A;  2YC1 C;  2LI7 A;  2ASC A;  2KJA A;  1MR4 A;  2B68 A;  1TI5 A;  1PX9 A;  1PE4 A;  1JXC A;  1T7E A;  1ICA A;  2E3G A;  2N2Q A;  1ZFU A;  2N66 A;  1AHO A;  1B3C A;  1I6G A;  5KK4 A;  1DQ7 A;  1JZA A;  1OZZ A;  2A7T A;  1BMR A;  1NRB A;  1WT7 A;  4CQK A;  1CN2 A;  2LJ7 A;  1GPS A;  2KYQ A;  1DJT A;  1VNB A;  1VNA A;  2KGQ A;  2KPY A;  4UJ0 A;  1NPI A;  1LQH A;  1P00 A;  2LT8 A;  2I61 A;  4AEI A;  1LQI A;  2LKB A;  1AYJ A;  3PSM A;  1CHZ A;  1ZUT A;  2LJM A;  1T7B A;  1ZU3 A;  2KSK A;  2NY8 X;  2MZ0 A;  2NY9 X;  2ATB A;  1N4N A;  1L4V A;  1FH3 A;  1PTX A;  1JZB A;  1ZVE A;  3E7R L;  2LR3 A;  1T7A A;  1NH5 A;  1BCG A;  1SEG A;  1I6F A;  2M8B B;  1JKZ A;  2KBK A;  2KBH A;  1B7D A;  1NE5 A;  2YEO A;  1GPT A;  4HHF A;  4V1D C;  1SN1 A;  2YBR C;  1WWN A;  3E7U X;  1T0Z A;  1I2U A;  1BRZ A;  4KYP A;  1NRA A;  2BRZ A;  2N69 A;  1C55 A; 
#chains in the Genus database with same CATH topology
 2E88 A;  1MYN A;  1T1T A;  2E3F A;  2GL1 A;  2MN5 A;  1LQQ A;  2VY6 A;  3C7N B;  3CW4 A;  1BK8 A;  1NGJ A;  2SN3 A;  3D2E A;  5AQF A;  1WMT A;  3LDL A;  2B3C A;  1P0A A;  2E0H A;  3ATU A;  2QWL A;  4FSV A;  1XRS B;  1UGL A;  1NGA A;  1KAY A;  1QQM A;  5AQX A;  2LY5 A;  5CY0 A;  4UAD E;  3L56 A;  4AB0 A;  2QWM A;  5F0X A;  1SNB A;  1BA1 A;  1POI A;  1ZYV A;  3LDP A;  1SN4 A;  2QW9 A;  2LY6 A;  2YIL A;  4HE7 A;  1I2V A;  4AAZ A;  2G2K A;  2KBJ A;  5AR0 A;  3JXU A;  3L4I A;  4KBO A;  1NGE A;  2K35 A;  3KOW A;  1ZYW A;  4H5R A;  1NGG A;  2QWR A;  5FPN A;  1C56 A;  3L6Q A;  1ZVG A;  3KP0 A;  2N2R A;  1KV0 A;  1OMY A;  2QWQ A;  1KAZ A;  2YC1 C;  5AQI A;  1DKG D;  3AY9 A;  1HX1 A;  2LI7 A;  2ASC A;  2E8A A;  2KJA A;  1NGH A;  1MR4 A;  1C55 A;  4GNI A;  4FL9 A;  2B68 A;  1TI5 A;  1PX9 A;  1PE4 A;  3FZK A;  1JXC A;  4UAE F;  5AQT A;  1T7E A;  1ICA A;  2E3G A;  5AQK A;  1BA0 A;  5EVZ A;  2N2Q A;  3KOZ A;  1ZFU A;  2N66 A;  3D2F B;  3QI7 A;  3GKU A;  3KHW A;  1AHO A;  3C7N A;  1B3C A;  3KP1 A;  1I6G A;  1K8B A;  5KK4 A;  1DQ7 A;  1JZA A;  4IO8 A;  1OZZ A;  2A7T A;  5AQZ A;  1BMR A;  3GDQ A;  5AQQ A;  1NGD A;  1NRB A;  5AQV A;  1WT7 A;  4CQK A;  1CN2 A;  3QML A;  2LJ7 A;  5BPM A;  1GPS A;  3QFP A;  2KYQ A;  5AQO A;  1DJT A;  1VNB A;  2LN8 A;  1VNA A;  2KGQ A;  2KPY A;  5F2R A;  1HPM A;  5EY4 A;  4UJ0 A;  1YUW A;  1KAX A;  1NGB A;  1NPI A;  1LQH A;  3KVG A;  4H5T A;  3IUC A;  5AQH A;  3CQX A;  1P00 A;  5AQR A;  2E2F A;  5AQU A;  2LT8 A;  2I61 A;  1S3X A;  2JDQ D;  3KC6 A;  2MBK A;  5FPM A;  4AEI A;  1LQI A;  2LKB A;  3A8Y A;  1AYJ A;  5BPL A;  1ATS A;  3PSM A;  5AQW A;  3KOY A;  5EXW A;  3I33 A;  5AQP A;  1CHZ A;  1ZUT A;  2LJM A;  1T7B A;  1ZU3 A;  2KSK A;  3D2E B;  3SF4 D;  1ATR A;  2QWO A;  2NY8 X;  2MZ0 A;  2NY9 X;  3LDN A;  2ATB A;  5AQJ A;  4UAF E;  1N4N A;  5AQN A;  1L4V A;  1FH3 A;  3LDQ A;  1PTX A;  1JZB A;  1ZVE A;  2D56 A;  3E7R L;  4H5V A;  5AQS A;  1NGC A;  2LR3 A;  1T7A A;  1NH5 A;  1NGI A;  3QFU A;  1BCG A;  1SEG A;  2QWN A;  5FPD A;  5F1X A;  1I6F A;  4H5N A;  3LDO A;  2BUP A;  4HWI A;  2GMO A;  3FE1 A;  2M8B B;  3KOX A;  1JKZ A;  2KBK A;  2KBH A;  2KHO A;  1B7D A;  1NE5 A;  3FZH A;  2YEO A;  3BK3 C;  5BPN A;  4HHF A;  1GPT A;  2YIO A;  4V1D C;  3GL1 A;  1HJO A;  1BUP A;  1SN1 A;  2YBR C;  1WWN A;  5AQY A;  4H5W A;  3E7U X;  1NGF A;  3R2V A;  2QXL A;  1T0Z A;  3HSC A;  3M3Z A;  5AQL A;  5FPE A;  5EX5 A;  5BN8 A;  2QWP A;  1I2U A;  1QQN A;  1BRZ A;  3FZL A;  5AQG A;  3D2F A;  5BN9 A;  4KYP A;  3FZF A;  1NRA A;  2YIP A;  3FZM A;  2BRZ A;  2N69 A;  1QQO A;  5AQM A;  3ATV A;  2V7Z A; 
#chains in the Genus database with same CATH homology
 1MYN A;  1T1T A;  2E3F A;  2GL1 A;  1BK8 A;  1LQQ A;  2SN3 A;  1WMT A;  2B3C A;  1P0A A;  2E0H A;  5CY0 A;  2LY5 A;  4AB0 A;  1SNB A;  1ZYV A;  1SN4 A;  2LY6 A;  4HE7 A;  1I2V A;  4AAZ A;  2KBJ A;  1ZYW A;  1C56 A;  1ZVG A;  2N2R A;  1KV0 A;  1OMY A;  2YC1 C;  2LI7 A;  2ASC A;  2KJA A;  1MR4 A;  2B68 A;  1TI5 A;  1PX9 A;  1PE4 A;  1JXC A;  1T7E A;  1ICA A;  2E3G A;  2N2Q A;  1ZFU A;  2N66 A;  1AHO A;  1B3C A;  1I6G A;  5KK4 A;  1DQ7 A;  1JZA A;  1OZZ A;  2A7T A;  1BMR A;  1NRB A;  1WT7 A;  4CQK A;  1CN2 A;  2LJ7 A;  1GPS A;  2KYQ A;  1DJT A;  1VNB A;  1VNA A;  2KGQ A;  2KPY A;  4UJ0 A;  1NPI A;  1LQH A;  1P00 A;  2LT8 A;  2I61 A;  4AEI A;  1LQI A;  2LKB A;  1AYJ A;  3PSM A;  1CHZ A;  1ZUT A;  2LJM A;  1T7B A;  1ZU3 A;  2KSK A;  2NY8 X;  2MZ0 A;  2NY9 X;  2ATB A;  1N4N A;  1L4V A;  1FH3 A;  1PTX A;  1JZB A;  1ZVE A;  3E7R L;  2LR3 A;  1T7A A;  1NH5 A;  1BCG A;  1SEG A;  1I6F A;  2M8B B;  1JKZ A;  2KBK A;  2KBH A;  1B7D A;  1NE5 A;  2YEO A;  1GPT A;  4HHF A;  4V1D C;  1SN1 A;  2YBR C;  1WWN A;  3E7U X;  1T0Z A;  1I2U A;  1BRZ A;  4KYP A;  1NRA A;  2BRZ A;  2N69 A;  1C55 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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