1I2UA

Nmr solution structures of antifungal heliomicin
Total Genus 11

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
44
structure length
44
Chain Sequence
DKLIGSCVWGAVNYTSDCNGECKRRGYKGGHCGSFANVNCWCET

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (2-6)TIV1 (8-11)TIV2 (11-14)TIV5 (35-38)EMPTYS3 (39-42)TIV3 (15-18)S2 (30-32)TIV4 (34-37)AH1 (18-25)Updating...
connected with : NaN
molecule tags Antifungal protein
source organism Heliothis virescens
publication title Solution structures of the antifungal heliomicin and a selected variant with both antibacterial and antifungal activities.
pubmed doi rcsb
molecule keywords DEFENSIN HELIOMICIN
total genus 11
structure length 44
sequence length 44
ec nomenclature
pdb deposition date 2001-02-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 1i2uA00
2LY6A 1DQ7A 1ZVEA 1MYNA 1ZUTA 2NY8X 5CY0A 2LT8A 1SN1A 1PE4A 2KJAA 1ZFUA 2SN3A 1B3CA 2YEOA 2BRZA 2KYQA 1JZAA 1NH5A 2A7TA 1I2UA 2N69A 3E7RL 1DJTA 1C56A 1BMRA 1T0ZA 1NPIA 4AEIA 3PSMA 1AHOA 4HHFA 1GPTA 2LI7A 1ICAA 1PX9A 1BK8A 1WMTA 1T7BA 1GPSA 4AB0A 2GL1A 2LJ7A 1JXCA 1JKZA 1T7EA 1NE5A 2MZ0A 1BRZA 2ATBA 2I61A 1ZVGA 1JZBA 1OZZA 1LQQA 1AYJA 2YBRC 2B68A 2LKBA 1T7AA 4UJ0A 2E3GA 5KK4A 2KBKA 2LJMA 1TI5A 1P00A 1SN4A 1ZU3A 2KPYA 4V1DC 1B7DA 3E7UX 2LR3A 1CHZA 1I2VA 1FH3A 1MR4A 2N2QA 1PTXA 2KSKA 1NRAA 1C55A 4HE7A 2KBJA 4KYPA 1P0AA 1I6FA 1KV0A 1ZYVA 2KGQA 2YC1C 1LQIA 2N66A 1CN2A 1L4VA 2M8BB 2B3CA 1SNBA 2NY9X 2KBHA 1I6GA 4CQKA 1ZYWA 1SEGA 1VNAA 1WT7A 1WWNA 2ASCA 1OMYA 4AAZA 1BCGA 2E0HA 1LQHA 1VNBA 1T1TA 2N2RA 1NRBA 1N4NA 2E3FA 2LY5A
chains in the Genus database with same CATH superfamily
2LY6A 3FZHA 1KAZA 1DQ7A 4H5VA 1ZVEA 1MYNA 1ZUTA 2JDQD 1KAYA 2NY8X 2LT8A 3KHWA 1SN1A 5AQVA 1PE4A 5CY0A 3L6QA 2KJAA 1ZFUA 1NGJA 2E8AA 5AQFA 3KP0A 3FZMA 2SN3A 1B3CA 1KAXA 2GMOA 2YEOA 2BRZA 2KYQA 3KOXA 4H5NA 1JZAA 1NGHA 1BA0A 1NH5A 5FPDA 3KC6A 2A7TA 1I2UA 2G2KA 2N69A 1NGIA 1DJTA 1C56A 3E7RL 5AQZA 2KHOA 1BMRA 1T0ZA 1NPIA 4AEIA 3PSMA 3KOZA 1AHOA 4HHFA 1GPTA 3GDQA 1BUPA 2LI7A 3QFPA 2YIOA 3KVGA 5AQWA 3CW4A 1PX9A 5AQOA 5BN9A 1BK8A 1ICAA 1WMTA 1T7BA 3LDQA 1GPSA 4AB0A 1QQOA 4UAFE 2GL1A 1XRSB 1JXCA 2LJ7A 2QWLA 5AQLA 1YUWA 5EY4A 4UADE 3I33A 1JKZA 5AQSA 2MBKA 5AQYA 1T7EA 2LN8A 1NE5A 5FPMA 2MZ0A 4UAEF 2QWNA 5F1XA 3FZLA 3LDPA 2ATBA 5AQQA 1BRZA 2QWOA 3JXUA 2I61A 3FZKA 1ZVGA 1JZBA 5AQKA 1OZZA 3L4IA 1BA1A 3D2FA 1LQQA 2YILA 3FZFA 1AYJA 1K8BA 3GKUA 2YBRC 3CQXA 2B68A 2LKBA 1NGBA 2K35A 3SF4D 3QFUA 3KP1A 1T7AA 4UJ0A 2E3GA 2D56A 5KK4A 2KBKA 5AQPA 2LJMA 1ATSA 1NGDA 2QWQA 2QWPA 2E2FA 2QWMA 1TI5A 1P00A 1SN4A 1NGAA 1ZU3A 2KPYA 3ATVA 3QI7A 3C7NA 4V1DC 3D2EA 1B7DA 2E3FA 3E7UX 2QWRA 2QXLA 5AQNA 2LR3A 2E88A 5AQGA 4FL9A 1QQNA 2MN5A 1CHZA 4H5RA 5BN8A 1I2VA 2V7ZA 1FH3A 1S3XA 1MR4A 1POIA 2N2QA 1PTXA 2KSKA 3M3ZA 1C55A 5F0XA 2BUPA 3IUCA 4HE7A 2KBJA 4HWIA 4IO8A 4KYPA 3L56A 5AQHA 1P0AA 5AQIA 3BK3C 1I6FA 1KV0A 3GL1A 1HPMA 4H5WA 2QW9A 2YIPA 5AQMA 1ZYVA 2KGQA 2YC1C 3LDNA 5AQJA 5AQXA 3A8YA 1LQIA 2N66A 4GNIA 1CN2A 1HX1A 1L4VA 2M8BB 3D2FB 2VY6A 2B3CA 1SNBA 2NY9X 2KBHA 5FPEA 3AY9A 3FE1A 5EX5A 4CQKA 1I6GA 1NGGA 3LDLA 3LDOA 5FPNA 1ZYWA 1SEGA 1VNAA 3R2VA 1NGCA 1WT7A 5BPMA 3KOWA 1QQMA 1UGLA 5EVZA 1HJOA 3ATUA 5F2RA 1DKGD 1WWNA 5BPLA 4H5TA 2ASCA 5AQRA 1OMYA 3QMLA 4AAZA 1NGFA 3HSCA 3KOYA 1BCGA 2E0HA 3C7NB 1ATRA 1LQHA 3D2EB 4FSVA 4KBOA 5AQUA 1VNBA 1T1TA 2N2RA 5AQTA 5AR0A 5BPNA 1NRBA 5EXWA 1N4NA 1NGEA 1NRAA 2LY5A
chains in the Genus database with same CATH topology
2LY6A 1DQ7A 1ZVEA 1MYNA 1ZUTA 2NY8X 5CY0A 2LT8A 1SN1A 1PE4A 2KJAA 1ZFUA 2SN3A 1B3CA 2YEOA 2BRZA 2KYQA 1JZAA 1NH5A 2A7TA 1I2UA 2N69A 3E7RL 1DJTA 1C56A 1BMRA 1T0ZA 1NPIA 4AEIA 3PSMA 1AHOA 4HHFA 1GPTA 2LI7A 1ICAA 1PX9A 1BK8A 1WMTA 1T7BA 1GPSA 4AB0A 2GL1A 2LJ7A 1JXCA 1JKZA 1T7EA 1NE5A 2MZ0A 1BRZA 2ATBA 2I61A 1ZVGA 1JZBA 1OZZA 1LQQA 1AYJA 2YBRC 2B68A 2LKBA 1T7AA 4UJ0A 2E3GA 5KK4A 2KBKA 2LJMA 1TI5A 1P00A 1SN4A 1ZU3A 2KPYA 4V1DC 1B7DA 3E7UX 2LR3A 1CHZA 1I2VA 1FH3A 1MR4A 2N2QA 1PTXA 2KSKA 1NRAA 1C55A 4HE7A 2KBJA 4KYPA 1P0AA 1I6FA 1KV0A 1ZYVA 2KGQA 2YC1C 1LQIA 2N66A 1CN2A 1L4VA 2M8BB 2B3CA 1SNBA 2NY9X 2KBHA 1I6GA 4CQKA 1ZYWA 1SEGA 1VNAA 1WT7A 1WWNA 2ASCA 1OMYA 4AAZA 1BCGA 2E0HA 1LQHA 1VNBA 1T1TA 2N2RA 1NRBA 1N4NA 2E3FA 2LY5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LY6 A;  1DQ7 A;  1ZVE A;  1MYN A;  1ZUT A;  2NY8 X;  5CY0 A;  2LT8 A;  1SN1 A;  1PE4 A;  2KJA A;  1ZFU A;  2SN3 A;  1B3C A;  2YEO A;  2BRZ A;  2KYQ A;  1JZA A;  1NH5 A;  2A7T A;  1I2U A;  2N69 A;  3E7R L;  1DJT A;  1C56 A;  1BMR A;  1T0Z A;  1NPI A;  4AEI A;  3PSM A;  1AHO A;  4HHF A;  1GPT A;  2LI7 A;  1ICA A;  1PX9 A;  1BK8 A;  1WMT A;  1T7B A;  1GPS A;  4AB0 A;  2GL1 A;  2LJ7 A;  1JXC A;  1JKZ A;  1T7E A;  1NE5 A;  2MZ0 A;  1BRZ A;  2ATB A;  2I61 A;  1ZVG A;  1JZB A;  1OZZ A;  1LQQ A;  1AYJ A;  2YBR C;  2B68 A;  2LKB A;  1T7A A;  4UJ0 A;  2E3G A;  5KK4 A;  2KBK A;  2LJM A;  1TI5 A;  1P00 A;  1SN4 A;  1ZU3 A;  2KPY A;  4V1D C;  1B7D A;  3E7U X;  2LR3 A;  1CHZ A;  1I2V A;  1FH3 A;  1MR4 A;  2N2Q A;  1PTX A;  2KSK A;  1NRA A;  1C55 A;  4HE7 A;  2KBJ A;  4KYP A;  1P0A A;  1I6F A;  1KV0 A;  1ZYV A;  2KGQ A;  2YC1 C;  1LQI A;  2N66 A;  1CN2 A;  1L4V A;  2M8B B;  2B3C A;  1SNB A;  2NY9 X;  2KBH A;  1I6G A;  4CQK A;  1ZYW A;  1SEG A;  1VNA A;  1WT7 A;  1WWN A;  2ASC A;  1OMY A;  4AAZ A;  1BCG A;  2E0H A;  1LQH A;  1VNB A;  1T1T A;  2N2R A;  1NRB A;  1N4N A;  2E3F A;  2LY5 A; 
#chains in the Genus database with same CATH topology
 2LY6 A;  3FZH A;  1KAZ A;  1DQ7 A;  4H5V A;  1ZVE A;  1MYN A;  1ZUT A;  2JDQ D;  1KAY A;  2NY8 X;  2LT8 A;  3KHW A;  1SN1 A;  5AQV A;  1PE4 A;  5CY0 A;  3L6Q A;  2KJA A;  1ZFU A;  1NGJ A;  2E8A A;  5AQF A;  3KP0 A;  3FZM A;  2SN3 A;  1B3C A;  1KAX A;  2GMO A;  2YEO A;  2BRZ A;  2KYQ A;  3KOX A;  4H5N A;  1JZA A;  1NGH A;  1BA0 A;  1NH5 A;  5FPD A;  3KC6 A;  2A7T A;  1I2U A;  2G2K A;  2N69 A;  1NGI A;  1DJT A;  1C56 A;  3E7R L;  5AQZ A;  2KHO A;  1BMR A;  1T0Z A;  1NPI A;  4AEI A;  3PSM A;  3KOZ A;  1AHO A;  4HHF A;  1GPT A;  3GDQ A;  1BUP A;  2LI7 A;  3QFP A;  2YIO A;  3KVG A;  5AQW A;  3CW4 A;  1PX9 A;  5AQO A;  5BN9 A;  1BK8 A;  1ICA A;  1WMT A;  1T7B A;  3LDQ A;  1GPS A;  4AB0 A;  1QQO A;  4UAF E;  2GL1 A;  1XRS B;  1JXC A;  2LJ7 A;  2QWL A;  5AQL A;  1YUW A;  5EY4 A;  4UAD E;  3I33 A;  1JKZ A;  5AQS A;  2MBK A;  5AQY A;  1T7E A;  2LN8 A;  1NE5 A;  5FPM A;  2MZ0 A;  4UAE F;  2QWN A;  5F1X A;  3FZL A;  3LDP A;  2ATB A;  5AQQ A;  1BRZ A;  2QWO A;  3JXU A;  2I61 A;  3FZK A;  1ZVG A;  1JZB A;  5AQK A;  1OZZ A;  3L4I A;  1BA1 A;  3D2F A;  1LQQ A;  2YIL A;  3FZF A;  1AYJ A;  1K8B A;  3GKU A;  2YBR C;  3CQX A;  2B68 A;  2LKB A;  1NGB A;  2K35 A;  3SF4 D;  3QFU A;  3KP1 A;  1T7A A;  4UJ0 A;  2E3G A;  2D56 A;  5KK4 A;  2KBK A;  5AQP A;  2LJM A;  1ATS A;  1NGD A;  2QWQ A;  2QWP A;  2E2F A;  2QWM A;  1TI5 A;  1P00 A;  1SN4 A;  1NGA A;  1ZU3 A;  2KPY A;  3ATV A;  3QI7 A;  3C7N A;  4V1D C;  3D2E A;  1B7D A;  2E3F A;  3E7U X;  2QWR A;  2QXL A;  5AQN A;  2LR3 A;  2E88 A;  5AQG A;  4FL9 A;  1QQN A;  2MN5 A;  1CHZ A;  4H5R A;  5BN8 A;  1I2V A;  2V7Z A;  1FH3 A;  1S3X A;  1MR4 A;  1POI A;  2N2Q A;  1PTX A;  2KSK A;  3M3Z A;  1C55 A;  5F0X A;  2BUP A;  3IUC A;  4HE7 A;  2KBJ A;  4HWI A;  4IO8 A;  4KYP A;  3L56 A;  5AQH A;  1P0A A;  5AQI A;  3BK3 C;  1I6F A;  1KV0 A;  3GL1 A;  1HPM A;  4H5W A;  2QW9 A;  2YIP A;  5AQM A;  1ZYV A;  2KGQ A;  2YC1 C;  3LDN A;  5AQJ A;  5AQX A;  3A8Y A;  1LQI A;  2N66 A;  4GNI A;  1CN2 A;  1HX1 A;  1L4V A;  2M8B B;  3D2F B;  2VY6 A;  2B3C A;  1SNB A;  2NY9 X;  2KBH A;  5FPE A;  3AY9 A;  3FE1 A;  5EX5 A;  4CQK A;  1I6G A;  1NGG A;  3LDL A;  3LDO A;  5FPN A;  1ZYW A;  1SEG A;  1VNA A;  3R2V A;  1NGC A;  1WT7 A;  5BPM A;  3KOW A;  1QQM A;  1UGL A;  5EVZ A;  1HJO A;  3ATU A;  5F2R A;  1DKG D;  1WWN A;  5BPL A;  4H5T A;  2ASC A;  5AQR A;  1OMY A;  3QML A;  4AAZ A;  1NGF A;  3HSC A;  3KOY A;  1BCG A;  2E0H A;  3C7N B;  1ATR A;  1LQH A;  3D2E B;  4FSV A;  4KBO A;  5AQU A;  1VNB A;  1T1T A;  2N2R A;  5AQT A;  5AR0 A;  5BPN A;  1NRB A;  5EXW A;  1N4N A;  1NGE A;  1NRA A;  2LY5 A; 
#chains in the Genus database with same CATH homology
 2LY6 A;  1DQ7 A;  1ZVE A;  1MYN A;  1ZUT A;  2NY8 X;  5CY0 A;  2LT8 A;  1SN1 A;  1PE4 A;  2KJA A;  1ZFU A;  2SN3 A;  1B3C A;  2YEO A;  2BRZ A;  2KYQ A;  1JZA A;  1NH5 A;  2A7T A;  1I2U A;  2N69 A;  3E7R L;  1DJT A;  1C56 A;  1BMR A;  1T0Z A;  1NPI A;  4AEI A;  3PSM A;  1AHO A;  4HHF A;  1GPT A;  2LI7 A;  1ICA A;  1PX9 A;  1BK8 A;  1WMT A;  1T7B A;  1GPS A;  4AB0 A;  2GL1 A;  2LJ7 A;  1JXC A;  1JKZ A;  1T7E A;  1NE5 A;  2MZ0 A;  1BRZ A;  2ATB A;  2I61 A;  1ZVG A;  1JZB A;  1OZZ A;  1LQQ A;  1AYJ A;  2YBR C;  2B68 A;  2LKB A;  1T7A A;  4UJ0 A;  2E3G A;  5KK4 A;  2KBK A;  2LJM A;  1TI5 A;  1P00 A;  1SN4 A;  1ZU3 A;  2KPY A;  4V1D C;  1B7D A;  3E7U X;  2LR3 A;  1CHZ A;  1I2V A;  1FH3 A;  1MR4 A;  2N2Q A;  1PTX A;  2KSK A;  1NRA A;  1C55 A;  4HE7 A;  2KBJ A;  4KYP A;  1P0A A;  1I6F A;  1KV0 A;  1ZYV A;  2KGQ A;  2YC1 C;  1LQI A;  2N66 A;  1CN2 A;  1L4V A;  2M8B B;  2B3C A;  1SNB A;  2NY9 X;  2KBH A;  1I6G A;  4CQK A;  1ZYW A;  1SEG A;  1VNA A;  1WT7 A;  1WWN A;  2ASC A;  1OMY A;  4AAZ A;  1BCG A;  2E0H A;  1LQH A;  1VNB A;  1T1T A;  2N2R A;  1NRB A;  1N4N A;  2E3F A;  2LY5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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