2A7TA

Crystal structure of a novel neurotoxin from buthus tamalus at 2.2a resolution.
Total Genus 14

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
64
structure length
64
Chain Sequence
GEDGYIADGDNCTYICTFNNYCHALCTDKKGDSGACDWWVPYGVVCWCEDLPTPVPIRGSGKCR

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (2-5)S2 (33-40)O1 (12-63)EMPTYTVIII2 (53-56)TI1 (8-11)AH1 (19-29)S3 (43-51)TI3 (52-55)Updating...
connected with : NaN
molecule tags Toxin
publication title Crystal structure of a highly acidic neurotoxin from scorpion Buthus tamulus at 2.2A resolution reveals novel structural features.
pubmed doi rcsb
molecule keywords Neurotoxin
total genus 14
structure length 64
sequence length 64
chains with identical sequence B
ec nomenclature
pdb deposition date 2005-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2a7tA00
1OZZA 2KSKA 4KYPA 1ZYVA 2B68A 2E3FA 2LJ7A 2NY9X 2KYQA 1CN2A 1T7AA 2MZ0A 2I61A 2N2RA 1WT7A 1SEGA 4AAZA 1T7BA 2N66A 1DQ7A 1SN4A 2NY8X 1GPTA 1ICAA 2YBRC 1FH3A 2N69A 2KBJA 1JXCA 1NRBA 2N2QA 1PTXA 5KK4A 1PE4A 4AEIA 1VNBA 1DJTA 2GL1A 2LY6A 2LI7A 1ZU3A 1WMTA 2KBKA 1I2VA 1LQHA 1SNBA 1P0AA 1ZVGA 2LT8A 4V1DC 1WWNA 3E7UX 1C56A 1BCGA 1OMYA 2BRZA 1C55A 1P00A 2E0HA 2KGQA 2KPYA 1I6GA 1VNAA 1ZFUA 1JZAA 2B3CA 1MYNA 4UJ0A 1BRZA 1ZUTA 1AYJA 1T0ZA 4HE7A 2SN3A 1BK8A 1B3CA 1KV0A 1ZYWA 1I2UA 2KBHA 3E7RL 2E3GA 2ATBA 2YC1C 1T7EA 2YEOA 1NRAA 1NH5A 1T1TA 1B7DA 1ZVEA 2LJMA 1JZBA 4AB0A 2A7TA 1N4NA 1AHOA 2KJAA 2LR3A 4CQKA 2ASCA 2LY5A 1JKZA 1BMRA 5CY0A 1MR4A 1NPIA 1PX9A 1SN1A 1CHZA 2M8BB 1LQIA 1NE5A 3PSMA 1I6FA 2LKBA 4HHFA 1L4VA 1LQQA 1TI5A 1GPSA
chains in the Genus database with same CATH superfamily
1KAXA 2QWNA 4UAEF 3D2FB 1OZZA 2KSKA 3AY9A 4HWIA 5AQGA 1HPMA 2E8AA 4H5RA 3KOYA 5AQMA 4KYPA 1YUWA 1ZYVA 2V7ZA 2B68A 2E3FA 2LJ7A 5F2RA 5EXWA 2NY9X 1KAYA 2KYQA 1CN2A 1BA1A 1T7AA 2MZ0A 4IO8A 2I61A 2N2RA 3FZFA 4FSVA 1WT7A 1SEGA 3KP0A 4AAZA 3D2FA 1T7BA 2N66A 3KOXA 1DQ7A 5AQYA 1SN4A 1QQMA 2NY8X 2QXLA 3M3ZA 5AQNA 5FPEA 5AQHA 1GPTA 1ICAA 3KP1A 2YBRC 1FH3A 3QI7A 2LN8A 3LDNA 1NGJA 2KBJA 1JXCA 2N69A 5AQZA 1NRBA 2JDQD 2KHOA 3L56A 1HJOA 2N2QA 1PTXA 5KK4A 1PE4A 1BUPA 1ATRA 1XRSB 4KBOA 4H5WA 4AEIA 5AQOA 1VNBA 1DJTA 2GL1A 2LY6A 2LI7A 2YIOA 1ZU3A 3CW4A 5F1XA 4FL9A 1WMTA 2KBKA 2QWMA 1QQOA 1S3XA 3FZLA 1I2VA 1LQHA 5AQFA 2QWLA 1SNBA 1P0AA 1ZVGA 5AQTA 1KAZA 2QWOA 2LT8A 5AQLA 3ATVA 4V1DC 1WWNA 1NGCA 3E7UX 1C56A 1BCGA 1OMYA 3GDQA 2BRZA 3LDQA 1C55A 4H5NA 3IUCA 3A8YA 5BN9A 1P00A 3I33A 2E0HA 2KGQA 3KOWA 2KPYA 5AR0A 5EY4A 1VNAA 1I6GA 5AQPA 2YIPA 1ZFUA 1JZAA 5EX5A 2BUPA 3KHWA 3SF4D 2MN5A 2D56A 2B3CA 1MYNA 3GKUA 3L4IA 1ZUTA 4GNIA 1UGLA 3JXUA 4UJ0A 5FPNA 1T0ZA 1BRZA 1AYJA 2YILA 3C7NB 3ATUA 3LDPA 4HE7A 5AQUA 5BPNA 2G2KA 2SN3A 5BPLA 2VY6A 3QFUA 1BK8A 3KOZA 1B3CA 5AQRA 3FZMA 5AQWA 1KV0A 1NGGA 5BPMA 1ZYWA 1I2UA 2KBHA 3E7RL 3KVGA 2QWRA 5AQJA 1DKGD 2E3GA 3KC6A 2ATBA 2YC1C 5AQSA 5BN8A 1NGEA 2QWQA 5AQQA 1T7EA 3D2EA 3BK3C 4H5TA 1NGDA 2YEOA 2QW9A 4UAFE 3GL1A 1NRAA 5FPMA 1NH5A 3CQXA 1T1TA 3C7NA 3FE1A 5AQXA 1B7DA 2QWPA 3L6QA 1K8BA 1ZVEA 3HSCA 5AQVA 1NGBA 3LDLA 5FPDA 2LJMA 1JZBA 4AB0A 1NGIA 5F0XA 2A7TA 3R2VA 1N4NA 3D2EB 5EVZA 1AHOA 4UADE 2KJAA 2LR3A 4CQKA 2MBKA 2ASCA 5AQKA 1NGFA 3LDOA 2LY5A 5AQIA 1BMRA 1JKZA 2E88A 5CY0A 2K35A 1HX1A 1MR4A 1NPIA 1PX9A 1QQNA 1SN1A 1CHZA 1POIA 2M8BB 1LQIA 1ATSA 1NE5A 3PSMA 2GMOA 1I6FA 2E2FA 2LKBA 3QFPA 1NGHA 1NGAA 4H5VA 3FZKA 4HHFA 1L4VA 1BA0A 1LQQA 1TI5A 3QMLA 3FZHA 1GPSA
chains in the Genus database with same CATH topology
1OZZA 2KSKA 4KYPA 1ZYVA 2B68A 2E3FA 2LJ7A 2NY9X 2KYQA 1CN2A 1T7AA 2MZ0A 2I61A 2N2RA 1WT7A 1SEGA 4AAZA 1T7BA 2N66A 1DQ7A 1SN4A 2NY8X 1GPTA 1ICAA 2YBRC 1FH3A 2N69A 2KBJA 1JXCA 1NRBA 2N2QA 1PTXA 5KK4A 1PE4A 4AEIA 1VNBA 1DJTA 2GL1A 2LY6A 2LI7A 1ZU3A 1WMTA 2KBKA 1I2VA 1LQHA 1SNBA 1P0AA 1ZVGA 2LT8A 4V1DC 1WWNA 3E7UX 1C56A 1BCGA 1OMYA 2BRZA 1C55A 1P00A 2E0HA 2KGQA 2KPYA 1I6GA 1VNAA 1ZFUA 1JZAA 2B3CA 1MYNA 4UJ0A 1BRZA 1ZUTA 1AYJA 1T0ZA 4HE7A 2SN3A 1BK8A 1B3CA 1KV0A 1ZYWA 1I2UA 2KBHA 3E7RL 2E3GA 2ATBA 2YC1C 1T7EA 2YEOA 1NRAA 1NH5A 1T1TA 1B7DA 1ZVEA 2LJMA 1JZBA 4AB0A 2A7TA 1N4NA 1AHOA 2KJAA 2LR3A 4CQKA 2ASCA 2LY5A 1JKZA 1BMRA 5CY0A 1MR4A 1NPIA 1PX9A 1SN1A 1CHZA 2M8BB 1LQIA 1NE5A 3PSMA 1I6FA 2LKBA 4HHFA 1L4VA 1LQQA 1TI5A 1GPSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OZZ A;  2KSK A;  4KYP A;  1ZYV A;  2B68 A;  2E3F A;  2LJ7 A;  2NY9 X;  2KYQ A;  1CN2 A;  1T7A A;  2MZ0 A;  2I61 A;  2N2R A;  1WT7 A;  1SEG A;  4AAZ A;  1T7B A;  2N66 A;  1DQ7 A;  1SN4 A;  2NY8 X;  1GPT A;  1ICA A;  2YBR C;  1FH3 A;  2N69 A;  2KBJ A;  1JXC A;  1NRB A;  2N2Q A;  1PTX A;  5KK4 A;  1PE4 A;  4AEI A;  1VNB A;  1DJT A;  2GL1 A;  2LY6 A;  2LI7 A;  1ZU3 A;  1WMT A;  2KBK A;  1I2V A;  1LQH A;  1SNB A;  1P0A A;  1ZVG A;  2LT8 A;  4V1D C;  1WWN A;  3E7U X;  1C56 A;  1BCG A;  1OMY A;  2BRZ A;  1C55 A;  1P00 A;  2E0H A;  2KGQ A;  2KPY A;  1I6G A;  1VNA A;  1ZFU A;  1JZA A;  2B3C A;  1MYN A;  4UJ0 A;  1BRZ A;  1ZUT A;  1AYJ A;  1T0Z A;  4HE7 A;  2SN3 A;  1BK8 A;  1B3C A;  1KV0 A;  1ZYW A;  1I2U A;  2KBH A;  3E7R L;  2E3G A;  2ATB A;  2YC1 C;  1T7E A;  2YEO A;  1NRA A;  1NH5 A;  1T1T A;  1B7D A;  1ZVE A;  2LJM A;  1JZB A;  4AB0 A;  2A7T A;  1N4N A;  1AHO A;  2KJA A;  2LR3 A;  4CQK A;  2ASC A;  2LY5 A;  1JKZ A;  1BMR A;  5CY0 A;  1MR4 A;  1NPI A;  1PX9 A;  1SN1 A;  1CHZ A;  2M8B B;  1LQI A;  1NE5 A;  3PSM A;  1I6F A;  2LKB A;  4HHF A;  1L4V A;  1LQQ A;  1TI5 A;  1GPS A; 
#chains in the Genus database with same CATH topology
 1KAX A;  2QWN A;  4UAE F;  3D2F B;  1OZZ A;  2KSK A;  3AY9 A;  4HWI A;  5AQG A;  1HPM A;  2E8A A;  4H5R A;  3KOY A;  5AQM A;  4KYP A;  1YUW A;  1ZYV A;  2V7Z A;  2B68 A;  2E3F A;  2LJ7 A;  5F2R A;  5EXW A;  2NY9 X;  1KAY A;  2KYQ A;  1CN2 A;  1BA1 A;  1T7A A;  2MZ0 A;  4IO8 A;  2I61 A;  2N2R A;  3FZF A;  4FSV A;  1WT7 A;  1SEG A;  3KP0 A;  4AAZ A;  3D2F A;  1T7B A;  2N66 A;  3KOX A;  1DQ7 A;  5AQY A;  1SN4 A;  1QQM A;  2NY8 X;  2QXL A;  3M3Z A;  5AQN A;  5FPE A;  5AQH A;  1GPT A;  1ICA A;  3KP1 A;  2YBR C;  1FH3 A;  3QI7 A;  2LN8 A;  3LDN A;  1NGJ A;  2KBJ A;  1JXC A;  2N69 A;  5AQZ A;  1NRB A;  2JDQ D;  2KHO A;  3L56 A;  1HJO A;  2N2Q A;  1PTX A;  5KK4 A;  1PE4 A;  1BUP A;  1ATR A;  1XRS B;  4KBO A;  4H5W A;  4AEI A;  5AQO A;  1VNB A;  1DJT A;  2GL1 A;  2LY6 A;  2LI7 A;  2YIO A;  1ZU3 A;  3CW4 A;  5F1X A;  4FL9 A;  1WMT A;  2KBK A;  2QWM A;  1QQO A;  1S3X A;  3FZL A;  1I2V A;  1LQH A;  5AQF A;  2QWL A;  1SNB A;  1P0A A;  1ZVG A;  5AQT A;  1KAZ A;  2QWO A;  2LT8 A;  5AQL A;  3ATV A;  4V1D C;  1WWN A;  1NGC A;  3E7U X;  1C56 A;  1BCG A;  1OMY A;  3GDQ A;  2BRZ A;  3LDQ A;  1C55 A;  4H5N A;  3IUC A;  3A8Y A;  5BN9 A;  1P00 A;  3I33 A;  2E0H A;  2KGQ A;  3KOW A;  2KPY A;  5AR0 A;  5EY4 A;  1VNA A;  1I6G A;  5AQP A;  2YIP A;  1ZFU A;  1JZA A;  5EX5 A;  2BUP A;  3KHW A;  3SF4 D;  2MN5 A;  2D56 A;  2B3C A;  1MYN A;  3GKU A;  3L4I A;  1ZUT A;  4GNI A;  1UGL A;  3JXU A;  4UJ0 A;  5FPN A;  1T0Z A;  1BRZ A;  1AYJ A;  2YIL A;  3C7N B;  3ATU A;  3LDP A;  4HE7 A;  5AQU A;  5BPN A;  2G2K A;  2SN3 A;  5BPL A;  2VY6 A;  3QFU A;  1BK8 A;  3KOZ A;  1B3C A;  5AQR A;  3FZM A;  5AQW A;  1KV0 A;  1NGG A;  5BPM A;  1ZYW A;  1I2U A;  2KBH A;  3E7R L;  3KVG A;  2QWR A;  5AQJ A;  1DKG D;  2E3G A;  3KC6 A;  2ATB A;  2YC1 C;  5AQS A;  5BN8 A;  1NGE A;  2QWQ A;  5AQQ A;  1T7E A;  3D2E A;  3BK3 C;  4H5T A;  1NGD A;  2YEO A;  2QW9 A;  4UAF E;  3GL1 A;  1NRA A;  5FPM A;  1NH5 A;  3CQX A;  1T1T A;  3C7N A;  3FE1 A;  5AQX A;  1B7D A;  2QWP A;  3L6Q A;  1K8B A;  1ZVE A;  3HSC A;  5AQV A;  1NGB A;  3LDL A;  5FPD A;  2LJM A;  1JZB A;  4AB0 A;  1NGI A;  5F0X A;  2A7T A;  3R2V A;  1N4N A;  3D2E B;  5EVZ A;  1AHO A;  4UAD E;  2KJA A;  2LR3 A;  4CQK A;  2MBK A;  2ASC A;  5AQK A;  1NGF A;  3LDO A;  2LY5 A;  5AQI A;  1BMR A;  1JKZ A;  2E88 A;  5CY0 A;  2K35 A;  1HX1 A;  1MR4 A;  1NPI A;  1PX9 A;  1QQN A;  1SN1 A;  1CHZ A;  1POI A;  2M8B B;  1LQI A;  1ATS A;  1NE5 A;  3PSM A;  2GMO A;  1I6F A;  2E2F A;  2LKB A;  3QFP A;  1NGH A;  1NGA A;  4H5V A;  3FZK A;  4HHF A;  1L4V A;  1BA0 A;  1LQQ A;  1TI5 A;  3QML A;  3FZH A;  1GPS A; 
#chains in the Genus database with same CATH homology
 1OZZ A;  2KSK A;  4KYP A;  1ZYV A;  2B68 A;  2E3F A;  2LJ7 A;  2NY9 X;  2KYQ A;  1CN2 A;  1T7A A;  2MZ0 A;  2I61 A;  2N2R A;  1WT7 A;  1SEG A;  4AAZ A;  1T7B A;  2N66 A;  1DQ7 A;  1SN4 A;  2NY8 X;  1GPT A;  1ICA A;  2YBR C;  1FH3 A;  2N69 A;  2KBJ A;  1JXC A;  1NRB A;  2N2Q A;  1PTX A;  5KK4 A;  1PE4 A;  4AEI A;  1VNB A;  1DJT A;  2GL1 A;  2LY6 A;  2LI7 A;  1ZU3 A;  1WMT A;  2KBK A;  1I2V A;  1LQH A;  1SNB A;  1P0A A;  1ZVG A;  2LT8 A;  4V1D C;  1WWN A;  3E7U X;  1C56 A;  1BCG A;  1OMY A;  2BRZ A;  1C55 A;  1P00 A;  2E0H A;  2KGQ A;  2KPY A;  1I6G A;  1VNA A;  1ZFU A;  1JZA A;  2B3C A;  1MYN A;  4UJ0 A;  1BRZ A;  1ZUT A;  1AYJ A;  1T0Z A;  4HE7 A;  2SN3 A;  1BK8 A;  1B3C A;  1KV0 A;  1ZYW A;  1I2U A;  2KBH A;  3E7R L;  2E3G A;  2ATB A;  2YC1 C;  1T7E A;  2YEO A;  1NRA A;  1NH5 A;  1T1T A;  1B7D A;  1ZVE A;  2LJM A;  1JZB A;  4AB0 A;  2A7T A;  1N4N A;  1AHO A;  2KJA A;  2LR3 A;  4CQK A;  2ASC A;  2LY5 A;  1JKZ A;  1BMR A;  5CY0 A;  1MR4 A;  1NPI A;  1PX9 A;  1SN1 A;  1CHZ A;  2M8B B;  1LQI A;  1NE5 A;  3PSM A;  1I6F A;  2LKB A;  4HHF A;  1L4V A;  1LQQ A;  1TI5 A;  1GPS A; 
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similar chains in the pdb database (?% sequence similarity)

 
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