2SN3 | Genus

Total Genus 17

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	17
sequence length	65
structure length	65
Chain Sequence	KEGYLVKKSDGCKYGCLKLGENEGCDTECKAKNQGGSYGYCYAFACWCEGLPESTPTYPLPNKSC

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Toxin
source organism	Centruroides exilicauda
publication title	Structure of scorpion toxin variant-3 at 1.2 A resolution. pubmed doi rcsb
molecule keywords	SCORPION NEUROTOXIN (VARIANT 3)
total genus	17
structure length	65
sequence length	65
ec nomenclature
pdb deposition date	1992-02-20

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00537	Toxin_3	Scorpion toxin-like domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.30.10	Alpha Beta	2-Layer Sandwich	Defensin A-like	Knottin, scorpion toxin-like	2sn3A00

2I61A 1BRZA 2SN3A 1I6FA 1FH3A 1DJTA 5CY0A 1DQ7A 1ZVGA 1WT7A 3E7RL 1SEGA 1BK8A 5KK4A 2E3GA 2KBKA 2A7TA 1VNAA 1MR4A 2LJ7A 4KYPA 3E7UX 1NPIA 1B7DA 2ASCA 2YBRC 1JXCA 1WWNA 1CHZA 1BMRA 4AAZA 1T1TA 2NY9X 1N4NA 2N2RA 2KBHA 1ZU3A 1T0ZA 1C55A 2N2QA 2YC1C 1OZZA 1P00A 1T7EA 2ATBA 4V1DC 2GL1A 2LI7A 2B3CA 1MYNA 2KBJA 1NH5A 2LY6A 1ZUTA 1AHOA 1WMTA 2M8BB 1BCGA 2LJMA 2B68A 1SN1A 1VNBA 2KJAA 4UJ0A 1JZAA 1T7BA 2BRZA 1I6GA 1JZBA 1TI5A 1I2VA 1LQIA 1B3CA 1L4VA 1LQHA 1ZYVA 4CQKA 2KSKA 2MZ0A 1SNBA 1GPSA 2E3FA 1CN2A 2LR3A 4AEIA 1PTXA 1KV0A 1GPTA 1OMYA 3PSMA 1NRBA 2LY5A 2KPYA 1PX9A 2N69A 2NY8X 1I2UA 1PE4A 1ZFUA 4AB0A 1NE5A 1AYJA 1C56A 2LT8A 4HHFA 1ICAA 2N66A 2E0HA 1NRAA 1ZVEA 2LKBA 1T7AA 4HE7A 1ZYWA 2YEOA 1SN4A 1P0AA 2KYQA 2KGQA 1LQQA 1JKZA
chains in the Genus database with same CATH superfamily

4KBOA 2I61A 1BRZA 2K35A 2SN3A 3KVGA 3FZFA 5AQPA 1KAXA 1I6FA 3D2EB 3A8YA 1POIA 5AQSA 1ATRA 4H5RA 1FH3A 1BA1A 1DJTA 3I33A 5CY0A 1DQ7A 4FL9A 2D56A 2QWMA 1ZVGA 1WT7A 3E7RL 1SEGA 3IUCA 2JDQD 3M3ZA 3FZMA 4H5VA 4H5TA 5KK4A 2E3GA 1BK8A 2KBKA 5AQVA 5AQYA 3CQXA 3KOZA 2MN5A 2A7TA 3D2EA 5AQUA 1VNAA 1UGLA 3AY9A 3JXUA 3FE1A 1MR4A 3KP1A 5EY4A 5AQMA 3LDLA 2LJ7A 4KYPA 5AQJA 1KAYA 5FPNA 3E7UX 4UAFE 4H5NA 3L6QA 5EXWA 3GKUA 1NPIA 1QQNA 3KP0A 2QWQA 3QMLA 3FZHA 1B7DA 1NGDA 2ASCA 1NGCA 3KHWA 1BUPA 3LDPA 1XRSB 3BK3C 2YBRC 1JXCA 1WWNA 1NGHA 3KOXA 4GNIA 1CHZA 5AQLA 5AQTA 3C7NA 3KOWA 4AAZA 1ATSA 1T1TA 4UAEF 5AQXA 2NY9X 1BMRA 1N4NA 5AQFA 2N2RA 5AQHA 2KBHA 1ZU3A 1T0ZA 1C55A 1KAZA 2N2QA 2YC1C 1OZZA 1P00A 1T7EA 2ATBA 5BPMA 4V1DC 3ATUA 2LN8A 4IO8A 5AQNA 2GL1A 2QW9A 5BN9A 2LI7A 3R2VA 2B3CA 2GMOA 1MYNA 5AQGA 2BUPA 5FPMA 2KBJA 5FPDA 5F1XA 1NH5A 3LDNA 2LY6A 1ZUTA 1AHOA 1WMTA 3C7NB 3LDQA 5AQRA 2E8AA 2M8BB 1BCGA 4UADE 5AQQA 2LJMA 5F2RA 1QQMA 2QXLA 1NGGA 1SN1A 1VNBA 2B68A 3QI7A 2KJAA 4H5WA 5F0XA 4UJ0A 5FPEA 4FSVA 1JZAA 1NGFA 1T7BA 2BRZA 3D2FB 1K8BA 2MBKA 1I6GA 1JZBA 1TI5A 5AQKA 3FZKA 1I2VA 2YILA 3ATVA 1NGAA 5AR0A 1LQIA 1B3CA 1L4VA 1LQHA 1ZYVA 4CQKA 2KSKA 2MZ0A 1SNBA 3HSCA 3LDOA 1GPSA 1HJOA 5AQIA 2E3FA 5AQZA 1CN2A 2LR3A 2QWLA 1NGIA 3D2FA 5EX5A 4AEIA 2VY6A 3FZLA 5EVZA 1NGEA 1KV0A 1PTXA 1OMYA 1YUWA 1NRBA 2LY5A 3PSMA 1BA0A 1PX9A 2KPYA 2N69A 2NY8X 2QWNA 1GPTA 1I2UA 3SF4D 1PE4A 2QWPA 3QFUA 2YIOA 1ZFUA 4AB0A 1NE5A 3KOYA 5BN8A 1C56A 2QWRA 1AYJA 2LT8A 4HHFA 2G2KA 1ICAA 2N66A 3QFPA 1S3XA 3KC6A 1NGBA 2E0HA 2E2FA 3L56A 4HWIA 1NRAA 1ZVEA 2LKBA 1HPMA 2YIPA 3GDQA 1T7AA 2V7ZA 3CW4A 4HE7A 1ZYWA 2YEOA 5AQOA 1SN4A 1HX1A 1NGJA 1P0AA 1DKGD 2KYQA 2QWOA 2KHOA 2KGQA 1QQOA 5AQWA 5BPLA 5BPNA 2E88A 1LQQA 3GL1A 3L4IA 1JKZA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 2I61 A;  1BRZ A;  2SN3 A;  1I6F A;  1FH3 A;  1DJT A;  5CY0 A;  1DQ7 A;  1ZVG A;  1WT7 A;  3E7R L;  1SEG A;  1BK8 A;  5KK4 A;  2E3G A;  2KBK A;  2A7T A;  1VNA A;  1MR4 A;  2LJ7 A;  4KYP A;  3E7U X;  1NPI A;  1B7D A;  2ASC A;  2YBR C;  1JXC A;  1WWN A;  1CHZ A;  1BMR A;  4AAZ A;  1T1T A;  2NY9 X;  1N4N A;  2N2R A;  2KBH A;  1ZU3 A;  1T0Z A;  1C55 A;  2N2Q A;  2YC1 C;  1OZZ A;  1P00 A;  1T7E A;  2ATB A;  4V1D C;  2GL1 A;  2LI7 A;  2B3C A;  1MYN A;  2KBJ A;  1NH5 A;  2LY6 A;  1ZUT A;  1AHO A;  1WMT A;  2M8B B;  1BCG A;  2LJM A;  2B68 A;  1SN1 A;  1VNB A;  2KJA A;  4UJ0 A;  1JZA A;  1T7B A;  2BRZ A;  1I6G A;  1JZB A;  1TI5 A;  1I2V A;  1LQI A;  1B3C A;  1L4V A;  1LQH A;  1ZYV A;  4CQK A;  2KSK A;  2MZ0 A;  1SNB A;  1GPS A;  2E3F A;  1CN2 A;  2LR3 A;  4AEI A;  1PTX A;  1KV0 A;  1GPT A;  1OMY A;  3PSM A;  1NRB A;  2LY5 A;  2KPY A;  1PX9 A;  2N69 A;  2NY8 X;  1I2U A;  1PE4 A;  1ZFU A;  4AB0 A;  1NE5 A;  1AYJ A;  1C56 A;  2LT8 A;  4HHF A;  1ICA A;  2N66 A;  2E0H A;  1NRA A;  1ZVE A;  2LKB A;  1T7A A;  4HE7 A;  1ZYW A;  2YEO A;  1SN4 A;  1P0A A;  2KYQ A;  2KGQ A;  1LQQ A;  1JKZ A; 
#chains in the Genus database with same CATH topology
 4KBO A;  2I61 A;  1BRZ A;  2K35 A;  2SN3 A;  3KVG A;  3FZF A;  5AQP A;  1KAX A;  1I6F A;  3D2E B;  3A8Y A;  1POI A;  5AQS A;  1ATR A;  4H5R A;  1FH3 A;  1BA1 A;  1DJT A;  3I33 A;  5CY0 A;  1DQ7 A;  4FL9 A;  2D56 A;  2QWM A;  1ZVG A;  1WT7 A;  3E7R L;  1SEG A;  3IUC A;  2JDQ D;  3M3Z A;  3FZM A;  4H5V A;  4H5T A;  5KK4 A;  2E3G A;  1BK8 A;  2KBK A;  5AQV A;  5AQY A;  3CQX A;  3KOZ A;  2MN5 A;  2A7T A;  3D2E A;  5AQU A;  1VNA A;  1UGL A;  3AY9 A;  3JXU A;  3FE1 A;  1MR4 A;  3KP1 A;  5EY4 A;  5AQM A;  3LDL A;  2LJ7 A;  4KYP A;  5AQJ A;  1KAY A;  5FPN A;  3E7U X;  4UAF E;  4H5N A;  3L6Q A;  5EXW A;  3GKU A;  1NPI A;  1QQN A;  3KP0 A;  2QWQ A;  3QML A;  3FZH A;  1B7D A;  1NGD A;  2ASC A;  1NGC A;  3KHW A;  1BUP A;  3LDP A;  1XRS B;  3BK3 C;  2YBR C;  1JXC A;  1WWN A;  1NGH A;  3KOX A;  4GNI A;  1CHZ A;  5AQL A;  5AQT A;  3C7N A;  3KOW A;  4AAZ A;  1ATS A;  1T1T A;  4UAE F;  5AQX A;  2NY9 X;  1BMR A;  1N4N A;  5AQF A;  2N2R A;  5AQH A;  2KBH A;  1ZU3 A;  1T0Z A;  1C55 A;  1KAZ A;  2N2Q A;  2YC1 C;  1OZZ A;  1P00 A;  1T7E A;  2ATB A;  5BPM A;  4V1D C;  3ATU A;  2LN8 A;  4IO8 A;  5AQN A;  2GL1 A;  2QW9 A;  5BN9 A;  2LI7 A;  3R2V A;  2B3C A;  2GMO A;  1MYN A;  5AQG A;  2BUP A;  5FPM A;  2KBJ A;  5FPD A;  5F1X A;  1NH5 A;  3LDN A;  2LY6 A;  1ZUT A;  1AHO A;  1WMT A;  3C7N B;  3LDQ A;  5AQR A;  2E8A A;  2M8B B;  1BCG A;  4UAD E;  5AQQ A;  2LJM A;  5F2R A;  1QQM A;  2QXL A;  1NGG A;  1SN1 A;  1VNB A;  2B68 A;  3QI7 A;  2KJA A;  4H5W A;  5F0X A;  4UJ0 A;  5FPE A;  4FSV A;  1JZA A;  1NGF A;  1T7B A;  2BRZ A;  3D2F B;  1K8B A;  2MBK A;  1I6G A;  1JZB A;  1TI5 A;  5AQK A;  3FZK A;  1I2V A;  2YIL A;  3ATV A;  1NGA A;  5AR0 A;  1LQI A;  1B3C A;  1L4V A;  1LQH A;  1ZYV A;  4CQK A;  2KSK A;  2MZ0 A;  1SNB A;  3HSC A;  3LDO A;  1GPS A;  1HJO A;  5AQI A;  2E3F A;  5AQZ A;  1CN2 A;  2LR3 A;  2QWL A;  1NGI A;  3D2F A;  5EX5 A;  4AEI A;  2VY6 A;  3FZL A;  5EVZ A;  1NGE A;  1KV0 A;  1PTX A;  1OMY A;  1YUW A;  1NRB A;  2LY5 A;  3PSM A;  1BA0 A;  1PX9 A;  2KPY A;  2N69 A;  2NY8 X;  2QWN A;  1GPT A;  1I2U A;  3SF4 D;  1PE4 A;  2QWP A;  3QFU A;  2YIO A;  1ZFU A;  4AB0 A;  1NE5 A;  3KOY A;  5BN8 A;  1C56 A;  2QWR A;  1AYJ A;  2LT8 A;  4HHF A;  2G2K A;  1ICA A;  2N66 A;  3QFP A;  1S3X A;  3KC6 A;  1NGB A;  2E0H A;  2E2F A;  3L56 A;  4HWI A;  1NRA A;  1ZVE A;  2LKB A;  1HPM A;  2YIP A;  3GDQ A;  1T7A A;  2V7Z A;  3CW4 A;  4HE7 A;  1ZYW A;  2YEO A;  5AQO A;  1SN4 A;  1HX1 A;  1NGJ A;  1P0A A;  1DKG D;  2KYQ A;  2QWO A;  2KHO A;  2KGQ A;  1QQO A;  5AQW A;  5BPL A;  5BPN A;  2E88 A;  1LQQ A;  3GL1 A;  3L4I A;  1JKZ A; 
#chains in the Genus database with same CATH homology
 2I61 A;  1BRZ A;  2SN3 A;  1I6F A;  1FH3 A;  1DJT A;  5CY0 A;  1DQ7 A;  1ZVG A;  1WT7 A;  3E7R L;  1SEG A;  1BK8 A;  5KK4 A;  2E3G A;  2KBK A;  2A7T A;  1VNA A;  1MR4 A;  2LJ7 A;  4KYP A;  3E7U X;  1NPI A;  1B7D A;  2ASC A;  2YBR C;  1JXC A;  1WWN A;  1CHZ A;  1BMR A;  4AAZ A;  1T1T A;  2NY9 X;  1N4N A;  2N2R A;  2KBH A;  1ZU3 A;  1T0Z A;  1C55 A;  2N2Q A;  2YC1 C;  1OZZ A;  1P00 A;  1T7E A;  2ATB A;  4V1D C;  2GL1 A;  2LI7 A;  2B3C A;  1MYN A;  2KBJ A;  1NH5 A;  2LY6 A;  1ZUT A;  1AHO A;  1WMT A;  2M8B B;  1BCG A;  2LJM A;  2B68 A;  1SN1 A;  1VNB A;  2KJA A;  4UJ0 A;  1JZA A;  1T7B A;  2BRZ A;  1I6G A;  1JZB A;  1TI5 A;  1I2V A;  1LQI A;  1B3C A;  1L4V A;  1LQH A;  1ZYV A;  4CQK A;  2KSK A;  2MZ0 A;  1SNB A;  1GPS A;  2E3F A;  1CN2 A;  2LR3 A;  4AEI A;  1PTX A;  1KV0 A;  1GPT A;  1OMY A;  3PSM A;  1NRB A;  2LY5 A;  2KPY A;  1PX9 A;  2N69 A;  2NY8 X;  1I2U A;  1PE4 A;  1ZFU A;  4AB0 A;  1NE5 A;  1AYJ A;  1C56 A;  2LT8 A;  4HHF A;  1ICA A;  2N66 A;  2E0H A;  1NRA A;  1ZVE A;  2LKB A;  1T7A A;  4HE7 A;  1ZYW A;  2YEO A;  1SN4 A;  1P0A A;  2KYQ A;  2KGQ A;  1LQQ A;  1JKZ A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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2SN3A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations