3BK3C

Crystal structure of the complex of bmp-2 and the first von willebrand domain type c of crossveinless-2
Total Genus 8

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
67
structure length
67
Chain Sequence
WLITGTEASCENEGEVLHIPNITDNPCISCVCLNQKAECKQEKCAPLAEDCALVVKQTGACCEKCKG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
O8 (9-31)S3 (35-40)S1 (14-16)TII1 (11-14)TIV4 (31-34)O1 (14-79)TIV3 (20-23)TII2 (18-21)TIV2 (19-22)TI1 (21-24)S2 (27-32)TI2 (24-27)TIV5 (47-50)S5 (63-64)TII3 (56-59)S4 (53-54)Updating...
connected with : NaN
molecule tags Hormone/growth factor
source organism Homo sapiens
publication title Crystal structure analysis reveals how the Chordin family member crossveinless 2 blocks BMP-2 receptor binding
pubmed doi rcsb
molecule keywords Bone morphogenetic protein 2
total genus 8
structure length 67
sequence length 67
chains with identical sequence D
ec nomenclature
pdb deposition date 2007-12-05
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.190 Alpha Beta 2-Layer Sandwich Defensin A-like Defensin A-like 3bk3C00
2MBKA 3BK3C
chains in the Genus database with same CATH superfamily
3D2FA 2LKBA 4KYPA 1DKGD 2BRZA 4AEIA 2KYQA 5AQVA 5BPMA 1ZU3A 5AQSA 3FE1A 1BRZA 1B7DA 1PTXA 5F0XA 1T7EA 3KOYA 3KOXA 2B68A 2NY9X 3M3ZA 1ZVEA 5AQRA 1I6GA 4V1DC 4HE7A 1NGIA 2QWQA 5AQFA 1DQ7A 5FPEA 2QWLA 1NGDA 1T7AA 1T0ZA 3PSMA 2G2KA 2QWNA 2QWOA 3L6QA 1BUPA 2MBKA 2E3FA 5FPMA 4H5TA 5EXWA 2YIOA 1LQIA 1LQQA 1KAZA 3QFUA 1GPTA 1KAYA 1NGAA 3CW4A 2M8BB 1BK8A 1TI5A 2LT8A 2LJ7A 2N2RA 2YIPA 4GNIA 1KAXA 4AB0A 4H5RA 3LDLA 4KBOA 1AYJA 2JDQD 3IUCA 1JXCA 2KBHA 1JZBA 3KOZA 1GPSA 1S3XA 2LI7A 2KBKA 3AY9A 5EX5A 1NGBA 2KHOA 3JXUA 2E2FA 4UAFE 5AQGA 4IO8A 1NRAA 1VNAA 2YILA 5BPNA 1CN2A 3LDPA 4H5VA 1PE4A 1ZFUA 4UAEF 3LDNA 1T1TA 3R2VA 3GL1A 1ZVGA 2K35A 5AQHA 4H5NA 5BPLA 3CQXA 4HHFA 5F2RA 1I6FA 1NGCA 2E88A 5AQWA 2YC1C 3E7RL 3QI7A 5BN8A 3GDQA 1ATSA 3HSCA 4HWIA 5AQMA 1NE5A 1K8BA 5AQUA 3L4IA 2NY8X 2VY6A 3LDOA 4UADE 1NGEA 5FPDA 5AQQA 2N2QA 1NPIA 1HPMA 3SF4D 1ICAA 2B3CA 2E8AA 5AR0A 2KJAA 5AQIA 2LN8A 4CQKA 3I33A 5AQZA 1AHOA 1UGLA 2MZ0A 2QWRA 1FH3A 1MYNA 2SN3A 1NGGA 1ZYWA 5BN9A 1NGHA 3ATVA 4FL9A 1QQMA 2N69A 1PX9A 1OZZA 5EVZA 1QQNA 5AQPA 3KP1A 5AQJA 1KV0A 2KGQA 5CY0A 3C7NB 1OMYA 1CHZA 1WMTA 2I61A 1SN1A 1ZYVA 2LY5A 2V7ZA 2A7TA 2ASCA 1WWNA 1HX1A 3FZKA 3KHWA 3KVGA 1YUWA 4FSVA 5AQOA 5AQNA 1NGJA 3QFPA 4AAZA 1C55A 5AQXA 3FZHA 2KBJA 3D2EA 1BA0A 2KPYA 2YEOA 2KSKA 3BK3C 3FZFA 3FZMA 3A8YA 1WT7A 5F1XA 1P0AA 1XRSB 2GMOA 1DJTA 1ATRA 1P00A 2D56A 4H5WA 5AQTA 2MN5A 1LQHA 3KC6A 1L4VA 2QWPA 2LJMA 1C56A 5AQLA 3D2EB 2GL1A 2LY6A 3C7NA 1N4NA 2QXLA 3QMLA 5EY4A 2ATBA 3KP0A 3L56A 3D2FB 1SN4A 1SEGA 1T7BA 2BUPA 3E7UX 3LDQA 1SNBA 5AQKA 4UJ0A 1B3CA 2QW9A 3KOWA 2E3GA 1I2UA 1BCGA 2LR3A 1POIA 2QWMA 5KK4A 3ATUA 5AQYA 1NRBA 1I2VA 3FZLA 5FPNA 1BA1A 1JZAA 2E0HA 2YBRC 1NH5A 1ZUTA 1NGFA 1QQOA 1VNBA 2N66A 1BMRA 1JKZA 3GKUA 1MR4A 1HJOA
chains in the Genus database with same CATH topology
3D2FA 1DKGD 5AQVA 5BPMA 5AQSA 3FE1A 5F0XA 3M3ZA 5AQRA 1NGIA 2QWQA 5AQFA 5FPEA 2QWLA 1NGDA 2QWNA 2QWOA 3L6QA 1BUPA 2MBKA 5FPMA 4H5TA 2YIOA 1KAZA 3QFUA 1KAYA 1NGAA 3CW4A 2YIPA 4GNIA 1KAXA 4H5RA 3LDLA 4KBOA 2JDQD 3IUCA 1S3XA 3AY9A 5EX5A 1NGBA 2KHOA 3JXUA 2E2FA 4UAFE 5AQGA 4IO8A 2YILA 5BPNA 3LDPA 4H5VA 4UAEF 3LDNA 3R2VA 3GL1A 2K35A 5AQHA 4H5NA 5BPLA 3CQXA 5F2RA 1NGCA 2E88A 5AQWA 3QI7A 5BN8A 3HSCA 3GDQA 1ATSA 4HWIA 5AQMA 5AQUA 3L4IA 2VY6A 3LDOA 4UADE 1NGEA 5AQQA 1HPMA 3SF4D 2E8AA 5AR0A 5AQIA 2LN8A 3I33A 5AQZA 2QWRA 1NGGA 5BN9A 1NGHA 3ATVA 4FL9A 1QQMA 5EVZA 1QQNA 5AQPA 5AQJA 3C7NB 5EXWA 5FPNA 2V7ZA 3KHWA 3FZKA 3KVGA 1HX1A 4FSVA 1YUWA 5AQOA 5AQNA 1NGJA 3QFPA 5AQXA 3FZHA 3D2EA 1BA0A 3BK3C 3FZFA 3FZMA 5F1XA 3A8YA 2GMOA 4H5WA 1ATRA 2D56A 5AQTA 2MN5A 3KC6A 2QWPA 5AQLA 3D2EB 3C7NA 2QXLA 3QMLA 5EY4A 3L56A 3D2FB 2BUPA 3LDQA 5AQKA 2QW9A 2QWMA 1POIA 3ATUA 5AQYA 3FZLA 1BA1A 1NGFA 1QQOA 5FPDA 1HJOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MBK A;  3BK3 C; 
#chains in the Genus database with same CATH topology
 3D2F A;  2LKB A;  4KYP A;  1DKG D;  2BRZ A;  4AEI A;  2KYQ A;  5AQV A;  5BPM A;  1ZU3 A;  5AQS A;  3FE1 A;  1BRZ A;  1B7D A;  1PTX A;  5F0X A;  1T7E A;  3KOY A;  3KOX A;  2B68 A;  2NY9 X;  3M3Z A;  1ZVE A;  5AQR A;  1I6G A;  4V1D C;  4HE7 A;  1NGI A;  2QWQ A;  5AQF A;  1DQ7 A;  5FPE A;  2QWL A;  1NGD A;  1T7A A;  1T0Z A;  3PSM A;  2G2K A;  2QWN A;  2QWO A;  3L6Q A;  1BUP A;  2MBK A;  2E3F A;  5FPM A;  4H5T A;  5EXW A;  2YIO A;  1LQI A;  1LQQ A;  1KAZ A;  3QFU A;  1GPT A;  1KAY A;  1NGA A;  3CW4 A;  2M8B B;  1BK8 A;  1TI5 A;  2LT8 A;  2LJ7 A;  2N2R A;  2YIP A;  4GNI A;  1KAX A;  4AB0 A;  4H5R A;  3LDL A;  4KBO A;  1AYJ A;  2JDQ D;  3IUC A;  1JXC A;  2KBH A;  1JZB A;  3KOZ A;  1GPS A;  1S3X A;  2LI7 A;  2KBK A;  3AY9 A;  5EX5 A;  1NGB A;  2KHO A;  3JXU A;  2E2F A;  4UAF E;  5AQG A;  4IO8 A;  1NRA A;  1VNA A;  2YIL A;  5BPN A;  1CN2 A;  3LDP A;  4H5V A;  1PE4 A;  1ZFU A;  4UAE F;  3LDN A;  1T1T A;  3R2V A;  3GL1 A;  1ZVG A;  2K35 A;  5AQH A;  4H5N A;  5BPL A;  3CQX A;  4HHF A;  5F2R A;  1I6F A;  1NGC A;  2E88 A;  5AQW A;  2YC1 C;  3E7R L;  3QI7 A;  5BN8 A;  3GDQ A;  1ATS A;  3HSC A;  4HWI A;  5AQM A;  1NE5 A;  1K8B A;  5AQU A;  3L4I A;  2NY8 X;  2VY6 A;  3LDO A;  4UAD E;  1NGE A;  5FPD A;  5AQQ A;  2N2Q A;  1NPI A;  1HPM A;  3SF4 D;  1ICA A;  2B3C A;  2E8A A;  5AR0 A;  2KJA A;  5AQI A;  2LN8 A;  4CQK A;  3I33 A;  5AQZ A;  1AHO A;  1UGL A;  2MZ0 A;  2QWR A;  1FH3 A;  1MYN A;  2SN3 A;  1NGG A;  1ZYW A;  5BN9 A;  1NGH A;  3ATV A;  4FL9 A;  1QQM A;  2N69 A;  1PX9 A;  1OZZ A;  5EVZ A;  1QQN A;  5AQP A;  3KP1 A;  5AQJ A;  1KV0 A;  2KGQ A;  5CY0 A;  3C7N B;  1OMY A;  1CHZ A;  1WMT A;  2I61 A;  1SN1 A;  1ZYV A;  2LY5 A;  2V7Z A;  2A7T A;  2ASC A;  1WWN A;  1HX1 A;  3FZK A;  3KHW A;  3KVG A;  1YUW A;  4FSV A;  5AQO A;  5AQN A;  1NGJ A;  3QFP A;  4AAZ A;  1C55 A;  5AQX A;  3FZH A;  2KBJ A;  3D2E A;  1BA0 A;  2KPY A;  2YEO A;  2KSK A;  3BK3 C;  3FZF A;  3FZM A;  3A8Y A;  1WT7 A;  5F1X A;  1P0A A;  1XRS B;  2GMO A;  1DJT A;  1ATR A;  1P00 A;  2D56 A;  4H5W A;  5AQT A;  2MN5 A;  1LQH A;  3KC6 A;  1L4V A;  2QWP A;  2LJM A;  1C56 A;  5AQL A;  3D2E B;  2GL1 A;  2LY6 A;  3C7N A;  1N4N A;  2QXL A;  3QML A;  5EY4 A;  2ATB A;  3KP0 A;  3L56 A;  3D2F B;  1SN4 A;  1SEG A;  1T7B A;  2BUP A;  3E7U X;  3LDQ A;  1SNB A;  5AQK A;  4UJ0 A;  1B3C A;  2QW9 A;  3KOW A;  2E3G A;  1I2U A;  1BCG A;  2LR3 A;  1POI A;  2QWM A;  5KK4 A;  3ATU A;  5AQY A;  1NRB A;  1I2V A;  3FZL A;  5FPN A;  1BA1 A;  1JZA A;  2E0H A;  2YBR C;  1NH5 A;  1ZUT A;  1NGF A;  1QQO A;  1VNB A;  2N66 A;  1BMR A;  1JKZ A;  3GKU A;  1MR4 A;  1HJO A; 
#chains in the Genus database with same CATH homology
 3D2F A;  1DKG D;  5AQV A;  5BPM A;  5AQS A;  3FE1 A;  5F0X A;  3M3Z A;  5AQR A;  1NGI A;  2QWQ A;  5AQF A;  5FPE A;  2QWL A;  1NGD A;  2QWN A;  2QWO A;  3L6Q A;  1BUP A;  2MBK A;  5FPM A;  4H5T A;  2YIO A;  1KAZ A;  3QFU A;  1KAY A;  1NGA A;  3CW4 A;  2YIP A;  4GNI A;  1KAX A;  4H5R A;  3LDL A;  4KBO A;  2JDQ D;  3IUC A;  1S3X A;  3AY9 A;  5EX5 A;  1NGB A;  2KHO A;  3JXU A;  2E2F A;  4UAF E;  5AQG A;  4IO8 A;  2YIL A;  5BPN A;  3LDP A;  4H5V A;  4UAE F;  3LDN A;  3R2V A;  3GL1 A;  2K35 A;  5AQH A;  4H5N A;  5BPL A;  3CQX A;  5F2R A;  1NGC A;  2E88 A;  5AQW A;  3QI7 A;  5BN8 A;  3HSC A;  3GDQ A;  1ATS A;  4HWI A;  5AQM A;  5AQU A;  3L4I A;  2VY6 A;  3LDO A;  4UAD E;  1NGE A;  5AQQ A;  1HPM A;  3SF4 D;  2E8A A;  5AR0 A;  5AQI A;  2LN8 A;  3I33 A;  5AQZ A;  2QWR A;  1NGG A;  5BN9 A;  1NGH A;  3ATV A;  4FL9 A;  1QQM A;  5EVZ A;  1QQN A;  5AQP A;  5AQJ A;  3C7N B;  5EXW A;  5FPN A;  2V7Z A;  3KHW A;  3FZK A;  3KVG A;  1HX1 A;  4FSV A;  1YUW A;  5AQO A;  5AQN A;  1NGJ A;  3QFP A;  5AQX A;  3FZH A;  3D2E A;  1BA0 A;  3BK3 C;  3FZF A;  3FZM A;  5F1X A;  3A8Y A;  2GMO A;  4H5W A;  1ATR A;  2D56 A;  5AQT A;  2MN5 A;  3KC6 A;  2QWP A;  5AQL A;  3D2E B;  3C7N A;  2QXL A;  3QML A;  5EY4 A;  3L56 A;  3D2F B;  2BUP A;  3LDQ A;  5AQK A;  2QW9 A;  2QWM A;  1POI A;  3ATU A;  5AQY A;  3FZL A;  1BA1 A;  1NGF A;  1QQO A;  5FPD A;  1HJO A; 
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