4UADE

Importin alpha 7 delta ibb in complex with influenza pb2 nuclear localization domain
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
75
structure length
75
Chain Sequence
TSGVESAVLRGFLILGKEDRRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Molecular Determinants for Nuclear Import of Influenza A PB2 by Importin alpha Isoforms 3 and 7.
pubmed doi rcsb
molecule tags Protein transport
source organism Homo sapiens
molecule keywords Importin subunit alpha-7
total genus 13
structure length 75
sequence length 75
ec nomenclature
pdb deposition date 2014-08-08
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.90 Alpha Beta 2-Layer Sandwich Defensin A-like Defensin A-like 4uadE00
3KC6A 4UAFE 3R2VA 2GMOA 3L56A 4UAEF 4UADE 2VY6A 3KHWA 3CW4A 2JDQD
chains in the Genus database with same CATH superfamily
5CY0A 2N2QA 1NGJA 2QWPA 3ATUA 4V1DC 1GPTA 5AR0A 2B3CA 5AQWA 3KP1A 5F2RA 1N4NA 2KBKA 1I6GA 2LR3A 4UAFE 3ATVA 1JKZA 1NGHA 2LY6A 3E7RL 3LDLA 1QQOA 3LDPA 3PSMA 5AQVA 5AQSA 1LQIA 5EVZA 1ZVGA 4IO8A 4HE7A 1BRZA 5AQTA 3FE1A 4H5VA 3QFPA 1C56A 2KSKA 1T7BA 2E8AA 3I33A 4KBOA 2QWQA 1K8BA 1NGEA 2LI7A 5AQOA 2QWOA 1SEGA 3QMLA 5EY4A 4KYPA 1DKGD 2QWMA 1HJOA 2MN5A 3D2FA 4AEIA 3FZLA 2NY8X 1SNBA 2YC1C 3KC6A 2LN8A 3GL1A 5AQKA 1LQHA 1FH3A 4FSVA 1ICAA 2N2RA 1OMYA 1C55A 1NGFA 5AQUA 1HPMA 2KYQA 1NPIA 2SN3A 3E7UX 3L4IA 5KK4A 1NGCA 1SN1A 1NE5A 1ZFUA 1ZU3A 1PX9A 3C7NB 1NGIA 5AQXA 2QWNA 2YEOA 2GL1A 1GPSA 1DJTA 1PE4A 1NGDA 1WWNA 3R2VA 2YBRC 5AQGA 3GKUA 1P00A 1NH5A 2LJ7A 5AQJA 1BK8A 3AY9A 3KVGA 2MBKA 1XRSB 2NY9X 2YIOA 5EXWA 2I61A 2E3FA 3QI7A 5AQLA 2B68A 3L56A 3D2EA 3KOWA 5AQPA 1B7DA 4AAZA 5BN8A 1BA1A 1HX1A 2LJMA 1BA0A 2E88A 4HHFA 5AQYA 2V7ZA 5FPNA 5AQFA 1SN4A 3FZKA 1BMRA 2E0HA 2G2KA 2KHOA 1NGAA 2JDQD 3KOZA 1MYNA 5AQQA 3IUCA 3JXUA 2E3GA 1I2UA 3FZFA 1WT7A 2D56A 2K35A 3LDNA 5AQNA 5BPMA 3QFUA 1WMTA 4UADE 5BPNA 1L4VA 3L6QA 5AQIA 5F0XA 2QWLA 1PTXA 2GMOA 1UGLA 2KPYA 4UAEF 2KBHA 3D2FB 1TI5A 3FZMA 3LDOA 1B3CA 1JZAA 2E2FA 3KHWA 1NGBA 1T7EA 3KOXA 4UJ0A 2LY5A 2KGQA 2LKBA 1KAXA 1DQ7A 5BPLA 2ASCA 3GDQA 2YILA 2QW9A 3LDQA 3HSCA 1T1TA 3BK3C 1JZBA 4FL9A 1MR4A 2A7TA 2QWRA 3SF4D 4H5RA 4HWIA 1CN2A 1BCGA 1KAYA 1CHZA 2VY6A 3A8YA 5BN9A 5FPMA 1T7AA 2ATBA 4AB0A 4CQKA 5FPEA 1VNAA 1ZVEA 4H5TA 1S3XA 4H5NA 1QQNA 5AQRA 5AQZA 1ZYVA 2KBJA 5AQMA 1AYJA 1T0ZA 5FPDA 1OZZA 1POIA 2N66A 2YIPA 3FZHA 1AHOA 4H5WA 1QQMA 3D2EB 1VNBA 1NRBA 2N69A 2LT8A 4GNIA 3M3ZA 1KAZA 3KP0A 1P0AA 2BUPA 3C7NA 1KV0A 1YUWA 1NRAA 1ATSA 5F1XA 3CQXA 1BUPA 1NGGA 2MZ0A 1ATRA 1LQQA 1I2VA 5EX5A 2BRZA 1I6FA 5AQHA 2KJAA 2M8BB 3CW4A 1JXCA 2QXLA 1ZUTA 3KOYA 1ZYWA
chains in the Genus database with same CATH topology
1NGJA 2QWPA 3ATUA 5AR0A 5AQWA 5F2RA 4UAFE 3ATVA 1NGHA 3LDLA 3LDPA 1QQOA 5AQVA 5AQSA 5EVZA 4IO8A 5AQTA 3FE1A 4H5VA 3QFPA 4KBOA 2E8AA 3I33A 2QWQA 1NGEA 5AQOA 2QWOA 3QMLA 5EY4A 1DKGD 2QWMA 1HJOA 2MN5A 3D2FA 3FZLA 3KC6A 5AQKA 2LN8A 3GL1A 4FSVA 1NGFA 5AQUA 1HPMA 3L4IA 1NGCA 3C7NB 1NGIA 5AQXA 2QWNA 1NGDA 3R2VA 5AQGA 5AQJA 3AY9A 3KVGA 2MBKA 2YIOA 5EXWA 3QI7A 5AQLA 3L56A 3D2EA 5AQPA 5BN8A 1BA1A 1HX1A 1BA0A 2E88A 5FPNA 5AQYA 2V7ZA 5AQFA 3FZKA 2KHOA 1NGAA 2JDQD 5AQQA 3IUCA 3JXUA 3FZFA 5AQNA 2D56A 2K35A 3LDNA 5BPMA 3QFUA 4UADE 5BPNA 3L6QA 5AQIA 5F0XA 2QWLA 2GMOA 4UAEF 3D2FB 3FZMA 3LDOA 2E2FA 3KHWA 1NGBA 1KAXA 5BPLA 3GDQA 2YILA 2QW9A 3LDQA 3HSCA 3BK3C 4FL9A 3SF4D 2QWRA 4H5RA 4HWIA 1KAYA 3A8YA 2VY6A 5BN9A 5FPMA 5FPEA 4H5TA 1S3XA 4H5NA 1QQNA 5AQRA 5AQZA 5AQMA 5FPDA 3FZHA 1POIA 2YIPA 4H5WA 1QQMA 3D2EB 4GNIA 3M3ZA 1KAZA 2BUPA 3C7NA 1YUWA 1ATSA 5F1XA 3CQXA 1BUPA 1NGGA 1ATRA 5EX5A 5AQHA 3CW4A 2QXLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KC6 A;  4UAF E;  3R2V A;  2GMO A;  3L56 A;  4UAE F;  4UAD E;  2VY6 A;  3KHW A;  3CW4 A;  2JDQ D; 
#chains in the Genus database with same CATH topology
 5CY0 A;  2N2Q A;  1NGJ A;  2QWP A;  3ATU A;  4V1D C;  1GPT A;  5AR0 A;  2B3C A;  5AQW A;  3KP1 A;  5F2R A;  1N4N A;  2KBK A;  1I6G A;  2LR3 A;  4UAF E;  3ATV A;  1JKZ A;  1NGH A;  2LY6 A;  3E7R L;  3LDL A;  1QQO A;  3LDP A;  3PSM A;  5AQV A;  5AQS A;  1LQI A;  5EVZ A;  1ZVG A;  4IO8 A;  4HE7 A;  1BRZ A;  5AQT A;  3FE1 A;  4H5V A;  3QFP A;  1C56 A;  2KSK A;  1T7B A;  2E8A A;  3I33 A;  4KBO A;  2QWQ A;  1K8B A;  1NGE A;  2LI7 A;  5AQO A;  2QWO A;  1SEG A;  3QML A;  5EY4 A;  4KYP A;  1DKG D;  2QWM A;  1HJO A;  2MN5 A;  3D2F A;  4AEI A;  3FZL A;  2NY8 X;  1SNB A;  2YC1 C;  3KC6 A;  2LN8 A;  3GL1 A;  5AQK A;  1LQH A;  1FH3 A;  4FSV A;  1ICA A;  2N2R A;  1OMY A;  1C55 A;  1NGF A;  5AQU A;  1HPM A;  2KYQ A;  1NPI A;  2SN3 A;  3E7U X;  3L4I A;  5KK4 A;  1NGC A;  1SN1 A;  1NE5 A;  1ZFU A;  1ZU3 A;  1PX9 A;  3C7N B;  1NGI A;  5AQX A;  2QWN A;  2YEO A;  2GL1 A;  1GPS A;  1DJT A;  1PE4 A;  1NGD A;  1WWN A;  3R2V A;  2YBR C;  5AQG A;  3GKU A;  1P00 A;  1NH5 A;  2LJ7 A;  5AQJ A;  1BK8 A;  3AY9 A;  3KVG A;  2MBK A;  1XRS B;  2NY9 X;  2YIO A;  5EXW A;  2I61 A;  2E3F A;  3QI7 A;  5AQL A;  2B68 A;  3L56 A;  3D2E A;  3KOW A;  5AQP A;  1B7D A;  4AAZ A;  5BN8 A;  1BA1 A;  1HX1 A;  2LJM A;  1BA0 A;  2E88 A;  4HHF A;  5AQY A;  2V7Z A;  5FPN A;  5AQF A;  1SN4 A;  3FZK A;  1BMR A;  2E0H A;  2G2K A;  2KHO A;  1NGA A;  2JDQ D;  3KOZ A;  1MYN A;  5AQQ A;  3IUC A;  3JXU A;  2E3G A;  1I2U A;  3FZF A;  1WT7 A;  2D56 A;  2K35 A;  3LDN A;  5AQN A;  5BPM A;  3QFU A;  1WMT A;  4UAD E;  5BPN A;  1L4V A;  3L6Q A;  5AQI A;  5F0X A;  2QWL A;  1PTX A;  2GMO A;  1UGL A;  2KPY A;  4UAE F;  2KBH A;  3D2F B;  1TI5 A;  3FZM A;  3LDO A;  1B3C A;  1JZA A;  2E2F A;  3KHW A;  1NGB A;  1T7E A;  3KOX A;  4UJ0 A;  2LY5 A;  2KGQ A;  2LKB A;  1KAX A;  1DQ7 A;  5BPL A;  2ASC A;  3GDQ A;  2YIL A;  2QW9 A;  3LDQ A;  3HSC A;  1T1T A;  3BK3 C;  1JZB A;  4FL9 A;  1MR4 A;  2A7T A;  2QWR A;  3SF4 D;  4H5R A;  4HWI A;  1CN2 A;  1BCG A;  1KAY A;  1CHZ A;  2VY6 A;  3A8Y A;  5BN9 A;  5FPM A;  1T7A A;  2ATB A;  4AB0 A;  4CQK A;  5FPE A;  1VNA A;  1ZVE A;  4H5T A;  1S3X A;  4H5N A;  1QQN A;  5AQR A;  5AQZ A;  1ZYV A;  2KBJ A;  5AQM A;  1AYJ A;  1T0Z A;  5FPD A;  1OZZ A;  1POI A;  2N66 A;  2YIP A;  3FZH A;  1AHO A;  4H5W A;  1QQM A;  3D2E B;  1VNB A;  1NRB A;  2N69 A;  2LT8 A;  4GNI A;  3M3Z A;  1KAZ A;  3KP0 A;  1P0A A;  2BUP A;  3C7N A;  1KV0 A;  1YUW A;  1NRA A;  1ATS A;  5F1X A;  3CQX A;  1BUP A;  1NGG A;  2MZ0 A;  1ATR A;  1LQQ A;  1I2V A;  5EX5 A;  2BRZ A;  1I6F A;  5AQH A;  2KJA A;  2M8B B;  3CW4 A;  1JXC A;  2QXL A;  1ZUT A;  3KOY A;  1ZYW A; 
#chains in the Genus database with same CATH homology
 1NGJ A;  2QWP A;  3ATU A;  5AR0 A;  5AQW A;  5F2R A;  4UAF E;  3ATV A;  1NGH A;  3LDL A;  3LDP A;  1QQO A;  5AQV A;  5AQS A;  5EVZ A;  4IO8 A;  5AQT A;  3FE1 A;  4H5V A;  3QFP A;  4KBO A;  2E8A A;  3I33 A;  2QWQ A;  1NGE A;  5AQO A;  2QWO A;  3QML A;  5EY4 A;  1DKG D;  2QWM A;  1HJO A;  2MN5 A;  3D2F A;  3FZL A;  3KC6 A;  5AQK A;  2LN8 A;  3GL1 A;  4FSV A;  1NGF A;  5AQU A;  1HPM A;  3L4I A;  1NGC A;  3C7N B;  1NGI A;  5AQX A;  2QWN A;  1NGD A;  3R2V A;  5AQG A;  5AQJ A;  3AY9 A;  3KVG A;  2MBK A;  2YIO A;  5EXW A;  3QI7 A;  5AQL A;  3L56 A;  3D2E A;  5AQP A;  5BN8 A;  1BA1 A;  1HX1 A;  1BA0 A;  2E88 A;  5FPN A;  5AQY A;  2V7Z A;  5AQF A;  3FZK A;  2KHO A;  1NGA A;  2JDQ D;  5AQQ A;  3IUC A;  3JXU A;  3FZF A;  5AQN A;  2D56 A;  2K35 A;  3LDN A;  5BPM A;  3QFU A;  4UAD E;  5BPN A;  3L6Q A;  5AQI A;  5F0X A;  2QWL A;  2GMO A;  4UAE F;  3D2F B;  3FZM A;  3LDO A;  2E2F A;  3KHW A;  1NGB A;  1KAX A;  5BPL A;  3GDQ A;  2YIL A;  2QW9 A;  3LDQ A;  3HSC A;  3BK3 C;  4FL9 A;  3SF4 D;  2QWR A;  4H5R A;  4HWI A;  1KAY A;  3A8Y A;  2VY6 A;  5BN9 A;  5FPM A;  5FPE A;  4H5T A;  1S3X A;  4H5N A;  1QQN A;  5AQR A;  5AQZ A;  5AQM A;  5FPD A;  3FZH A;  1POI A;  2YIP A;  4H5W A;  1QQM A;  3D2E B;  4GNI A;  3M3Z A;  1KAZ A;  2BUP A;  3C7N A;  1YUW A;  1ATS A;  5F1X A;  3CQX A;  1BUP A;  1NGG A;  1ATR A;  5EX5 A;  5AQH A;  3CW4 A;  2QXL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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