1OGMX

Dex49a from penicillium minioluteum
Total Genus 184
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
184
sequence length
572
structure length
572
Chain Sequence
TTANTHCGADFCTWWHDSGEINTQTPVQPGNVRQSHKYSVQVSLAGTNNFHDSFVYESIPRNGNGRIYAPTDPPNSNTLDSSVDDGISIEPSIGLNMAWSQFEYSHDVDVKILATDGSSLGSPSDVVIRPVSISYAISQSDDGGIVIRVPADANGRKFSVEFKTDLYTFLSDGNEYVTSGGSVVGVEPTNALVIFASPFLPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords DEXTRANASE
publication title Dextranase from Penicillium Minioluteum. Reaction Course, Crystal Structure, and Product Complex
pubmed doi rcsb
source organism Penicillium minioluteum
total genus 184
structure length 572
sequence length 572
ec nomenclature ec 3.2.1.11: Dextranase.
pdb deposition date 2003-05-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
X PF17433 Glyco_hydro_49N Glycosyl hydrolase family 49 N-terminal Ig-like domain
X PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
X PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 1ogmX01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 1ogmX02
2VBEA 1O8EA 3GQ7A 1OFMA 5C1CA 1VBLA 1BN8A 2O17A 1IDJA 1PE9A 1IA5A 4HWVA 4NK8A 3JURA 2Z8GA 1HG8A 4U49A 1QJVA 1OOCA 2VBMA 5C1EA 4U4BA 2VJIA 4XNFA 4YZXA 4XN3A 1OGOX 1H80A 2QXZA 3GQ8A 3B90A 2PYGA 4XL9A 3VMWA 1GQ8A 3KRGA 2NZMA 3VSTA 4YZ0A 2NT6A 4URRA 4XORA 4OJOA 4XMYA 2X85A 4OJPA 2O0VA 4MXNA 3EQNA 1O8HA 1O8DA 4YELA 4YZQA 4MR0A 2PYHA 2INUA 4XQFA 1O8LA 4I84A 1KTWA 3GQ9A 2QY1A 3UW0A 4XLHA 4AVZA 1RWRA 2ODLA 1OGMX 2X6YA 4XKWA 5AMVA 1O8MA 1O8JA 1KCDA 4OJLA 2EWEA 2NSTA 2VBKA 3WWGA 1OFLA 1BHEA 3B4NA 2INVA 2O0WA 3ZSCA 2UVEA 2NTPA 1AIRA 4W8RA 2X6XA 2QX3A 4Z06A 4YZAA 1XG2A 3EQOA 4XOTA 1O88A 3GQAA 3LMWA 1IB4A 1WMRA 2O04A 4Z03A 1O8KA 3VMVA 4XLCA 4YEJA 4XR6A 2BSPA 2VJJA 1X0CA 2PECA 4XKVA 4EW9A 4W8QA 2NSPA 2NT9A 1O8IA 2NTQA 1K5CA 1EE6A 4OJ6A 3FY3A 1CZFA 2NTBA 4W8TA 2IQ7A 4OZZA 1PXZA 3GRHA 4XM3A 4C2LA 1JRGA 1KCCA 4XN0A 4OJ5A 3VSUA 3B8YA 3SUCA 1QCXA 4XLAA 4OZYA 1JTAA 4W8SA 4XLEA 3T9GA 1O8FA 1IDKA 1DBGA 2UVFA 4Z05A 3ZPPA 4PMHA 4XOPA 2X3HA 4XONA 1O8GA 1PLUA 4NK6A 1RMGA 1RU4A 3VSVA 1NHCA 4XLFA 2O1DA 1DBOA 2X6WA
chains in the Genus database with same CATH superfamily
2VBEA 3JX8A 1O8EA 3GQ7A 1EA0A 4V02C 1OFMA 5C1CA 4YFOA 1VBLA 1BN8A 2O17A 1IDJA 1PE9A 1CLWA 1IA5A 4HWVA 4NK8A 3JURA 3TH0A 2Z8GA 1HG8A 5JLVC 4U49A 1QJVA 1OOCA 2VBMA 5C1EA 4OM9A 3NB2A 4U4BA 2VJIA 4YDTA 2VFMA 3N90A 4XNFA 4YZXA 1QA1A 4XN3A 1OGOX 1H80A 2QXZA 3GQ8A 3B90A 2PYGA 4OPWA 2BM4A 4XL9A 2G0YA 3VMWA 1GQ8A 3KRGA 2NZMA 3VSTA 2W7ZA 4YZ0A 2NT6A 4URRA 4XORA 4OJOA 4XMYA 1TYVA 2X85A 1K4ZA 3PSZA 2O0VA 4OJPA 4MXNA 3EQNA 1O8HA 1O8DA 4YELA 4YZQA 4MR0A 1LLZA 2PYHA 2INUA 2VFQA 4KH3A 4XQFA 1O8LA 4I84A 3BH7B 2B0RA 3LJYA 1TSPA 2QZAA 3NAWA 4JRAC 1KTWA 2F3LA 3GQ9A 2QY1A 3UW0A 1QA2A 4XLHA 1QRBA 3DU1X 3PSSA 4AVZA 1RWRA 2ODLA 1OGMX 2X6YA 4XKWA 5AMVA 2XTYA 4YC5A 1O8MA 1O8JA 1KCDA 3BH6B 3SZEA 2VFOA 4OJLA 1QA3A 2EWEA 2NSTA 2VBKA 3WWGA 1OFLA 2J8KA 1BHEA 1EZGA 3B4NA 2INVA 2O0WA 3SQVA 3ZSCA 2UVEA 1LLWA 2NTPA 1OFEA 1AIRA 3N6ZA 4W8RA 2X6XA 1LM1A 2QX3A 1L1IA 4Z06A 4YZAA 1XG2A 2BM7A 3EQOA 2BM6A 4XOTA 1O88A 1TYWA 3GQAA 3LMWA 1IB4A 1WMRA 2XTWA 2O04A 3P4GA 3PETA 4Z03A 2XC1A 1O8KA 3VMVA 1DABA 4XLCA 1KQ5A 4YEJA 4XR6A 2BSPA 2VJJA 1WXRA 1QRCA 1X0CA 2PECA 3ML3A 4XKVA 5DNSA 4W8QA 2NSPA 3LYCA 4EW9A 2NT9A 1O8IA 2NTQA 1K5CA 1EE6A 4OJ6A 3FY3A 1CZFA 2NTBA 4W8TA 2IQ7A 1HF2A 2BM5A 4OZZA 1PXZA 1OFDA 1TYXA 3GRHA 4XM3A 4C2LA 1JRGA 1KCCA 4XN0A 4OJ5A 2VFNA 3VSUA 3B8YA 4YEIA 3SYJA 3SUCA 3H09A 1QCXA 1TYUA 4XLAA 2QYUA 2XTXA 4OZYA 1JTAA 4W8SA 4XLEA 2J8IA 3T9GA 3AK5A 1O8FA 1IDKA 1DBGA 2UVFA 4Z05A 2VFPA 2XT2A 1K8FA 3ZPPA 4PMHA 5JMCB 1QQ1A 4XOPA 2X3HA 4XONA 1O8GA 1PLUA 2BX6A 4NK6A 2V5IA 2O6WA 2IOUG 1RMGA 4YCQA 1RU4A 2YUHA 3VSVA 4XLFA 2O1DA 3SY2A 3RIQA 1NHCA 2XT4A 1DBOA 2X6WA
chains in the Genus database with same CATH topology
2VBEA 1O8EA 3GQ7A 1OFMA 5C1CA 1VBLA 1BN8A 2O17A 1IDJA 1PE9A 1IA5A 4HWVA 4NK8A 3JURA 2Z8GA 1HG8A 4U49A 1QJVA 1OOCA 2VBMA 5C1EA 4U4BA 2VJIA 4XNFA 4YZXA 4XN3A 1OGOX 1H80A 2QXZA 3GQ8A 3B90A 2PYGA 4XL9A 3VMWA 1GQ8A 3KRGA 2NZMA 3VSTA 4YZ0A 2NT6A 4URRA 4XORA 4OJOA 4XMYA 2X85A 4OJPA 2O0VA 4MXNA 3EQNA 1O8HA 1O8DA 4YELA 4YZQA 4MR0A 2PYHA 2INUA 4XQFA 1O8LA 4I84A 1KTWA 3GQ9A 2QY1A 3UW0A 4XLHA 4AVZA 1RWRA 2ODLA 1OGMX 2X6YA 4XKWA 5AMVA 1O8MA 1O8JA 1KCDA 4OJLA 2EWEA 2NSTA 2VBKA 3WWGA 1OFLA 1BHEA 3B4NA 2INVA 2O0WA 3ZSCA 2UVEA 2NTPA 1AIRA 4W8RA 2X6XA 2QX3A 4Z06A 4YZAA 1XG2A 3EQOA 4XOTA 1O88A 3GQAA 3LMWA 1IB4A 1WMRA 2O04A 4Z03A 1O8KA 3VMVA 4XLCA 4YEJA 4XR6A 2BSPA 2VJJA 1X0CA 2PECA 4XKVA 4EW9A 4W8QA 2NSPA 2NT9A 1O8IA 2NTQA 1K5CA 1EE6A 4OJ6A 3FY3A 1CZFA 2NTBA 4W8TA 2IQ7A 4OZZA 1PXZA 3GRHA 4XM3A 4C2LA 1JRGA 1KCCA 4XN0A 4OJ5A 3VSUA 3B8YA 3SUCA 1QCXA 4XLAA 4OZYA 1JTAA 4W8SA 4XLEA 3T9GA 1O8FA 1IDKA 1DBGA 2UVFA 4Z05A 3ZPPA 4PMHA 4XOPA 2X3HA 4XONA 1O8GA 1PLUA 4NK6A 1RMGA 1RU4A 3VSVA 1NHCA 4XLFA 2O1DA 1DBOA 2X6WA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VBE A;  1O8E A;  3GQ7 A;  1OFM A;  5C1C A;  1VBL A;  1BN8 A;  2O17 A;  1IDJ A;  1PE9 A;  1IA5 A;  4HWV A;  4NK8 A;  3JUR A;  2Z8G A;  1HG8 A;  4U49 A;  1QJV A;  1OOC A;  2VBM A;  5C1E A;  4U4B A;  2VJI A;  4XNF A;  4YZX A;  4XN3 A;  1OGO X;  1H80 A;  2QXZ A;  3GQ8 A;  3B90 A;  2PYG A;  4XL9 A;  3VMW A;  1GQ8 A;  3KRG A;  2NZM A;  3VST A;  4YZ0 A;  2NT6 A;  4URR A;  4XOR A;  4OJO A;  4XMY A;  2X85 A;  4OJP A;  2O0V A;  4MXN A;  3EQN A;  1O8H A;  1O8D A;  4YEL A;  4YZQ A;  4MR0 A;  2PYH A;  2INU A;  4XQF A;  1O8L A;  4I84 A;  1KTW A;  3GQ9 A;  2QY1 A;  3UW0 A;  4XLH A;  4AVZ A;  1RWR A;  2ODL A;  1OGM X;  2X6Y A;  4XKW A;  5AMV A;  1O8M A;  1O8J A;  1KCD A;  4OJL A;  2EWE A;  2NST A;  2VBK A;  3WWG A;  1OFL A;  1BHE A;  3B4N A;  2INV A;  2O0W A;  3ZSC A;  2UVE A;  2NTP A;  1AIR A;  4W8R A;  2X6X A;  2QX3 A;  4Z06 A;  4YZA A;  1XG2 A;  3EQO A;  4XOT A;  1O88 A;  3GQA A;  3LMW A;  1IB4 A;  1WMR A;  2O04 A;  4Z03 A;  1O8K A;  3VMV A;  4XLC A;  4YEJ A;  4XR6 A;  2BSP A;  2VJJ A;  1X0C A;  2PEC A;  4XKV A;  4EW9 A;  4W8Q A;  2NSP A;  2NT9 A;  1O8I A;  2NTQ A;  1K5C A;  1EE6 A;  4OJ6 A;  3FY3 A;  1CZF A;  2NTB A;  4W8T A;  2IQ7 A;  4OZZ A;  1PXZ A;  3GRH A;  4XM3 A;  4C2L A;  1JRG A;  1KCC A;  4XN0 A;  4OJ5 A;  3VSU A;  3B8Y A;  3SUC A;  1QCX A;  4XLA A;  4OZY A;  1JTA A;  4W8S A;  4XLE A;  3T9G A;  1O8F A;  1IDK A;  1DBG A;  2UVF A;  4Z05 A;  3ZPP A;  4PMH A;  4XOP A;  2X3H A;  4XON A;  1O8G A;  1PLU A;  4NK6 A;  1RMG A;  1RU4 A;  3VSV A;  1NHC A;  4XLF A;  2O1D A;  1DBO A;  2X6W A; 
#chains in the Genus database with same CATH topology
 2VBE A;  3JX8 A;  1O8E A;  3GQ7 A;  1EA0 A;  4V02 C;  1OFM A;  5C1C A;  4YFO A;  1VBL A;  1BN8 A;  2O17 A;  1IDJ A;  1PE9 A;  1CLW A;  1IA5 A;  4HWV A;  4NK8 A;  3JUR A;  3TH0 A;  2Z8G A;  1HG8 A;  5JLV C;  4U49 A;  1QJV A;  1OOC A;  2VBM A;  5C1E A;  4OM9 A;  3NB2 A;  4U4B A;  2VJI A;  4YDT A;  2VFM A;  3N90 A;  4XNF A;  4YZX A;  1QA1 A;  4XN3 A;  1OGO X;  1H80 A;  2QXZ A;  3GQ8 A;  3B90 A;  2PYG A;  4OPW A;  2BM4 A;  4XL9 A;  2G0Y A;  3VMW A;  1GQ8 A;  3KRG A;  2NZM A;  3VST A;  2W7Z A;  4YZ0 A;  2NT6 A;  4URR A;  4XOR A;  4OJO A;  4XMY A;  1TYV A;  2X85 A;  1K4Z A;  3PSZ A;  2O0V A;  4OJP A;  4MXN A;  3EQN A;  1O8H A;  1O8D A;  4YEL A;  4YZQ A;  4MR0 A;  1LLZ A;  2PYH A;  2INU A;  2VFQ A;  4KH3 A;  4XQF A;  1O8L A;  4I84 A;  3BH7 B;  2B0R A;  3LJY A;  1TSP A;  2QZA A;  3NAW A;  4JRA C;  1KTW A;  2F3L A;  3GQ9 A;  2QY1 A;  3UW0 A;  1QA2 A;  4XLH A;  1QRB A;  3DU1 X;  3PSS A;  4AVZ A;  1RWR A;  2ODL A;  1OGM X;  2X6Y A;  4XKW A;  5AMV A;  2XTY A;  4YC5 A;  1O8M A;  1O8J A;  1KCD A;  3BH6 B;  3SZE A;  2VFO A;  4OJL A;  1QA3 A;  2EWE A;  2NST A;  2VBK A;  3WWG A;  1OFL A;  2J8K A;  1BHE A;  1EZG A;  3B4N A;  2INV A;  2O0W A;  3SQV A;  3ZSC A;  2UVE A;  1LLW A;  2NTP A;  1OFE A;  1AIR A;  3N6Z A;  4W8R A;  2X6X A;  1LM1 A;  2QX3 A;  1L1I A;  4Z06 A;  4YZA A;  1XG2 A;  2BM7 A;  3EQO A;  2BM6 A;  4XOT A;  1O88 A;  1TYW A;  3GQA A;  3LMW A;  1IB4 A;  1WMR A;  2XTW A;  2O04 A;  3P4G A;  3PET A;  4Z03 A;  2XC1 A;  1O8K A;  3VMV A;  1DAB A;  4XLC A;  1KQ5 A;  4YEJ A;  4XR6 A;  2BSP A;  2VJJ A;  1WXR A;  1QRC A;  1X0C A;  2PEC A;  3ML3 A;  4XKV A;  5DNS A;  4W8Q A;  2NSP A;  3LYC A;  4EW9 A;  2NT9 A;  1O8I A;  2NTQ A;  1K5C A;  1EE6 A;  4OJ6 A;  3FY3 A;  1CZF A;  2NTB A;  4W8T A;  2IQ7 A;  1HF2 A;  2BM5 A;  4OZZ A;  1PXZ A;  1OFD A;  1TYX A;  3GRH A;  4XM3 A;  4C2L A;  1JRG A;  1KCC A;  4XN0 A;  4OJ5 A;  2VFN A;  3VSU A;  3B8Y A;  4YEI A;  3SYJ A;  3SUC A;  3H09 A;  1QCX A;  1TYU A;  4XLA A;  2QYU A;  2XTX A;  4OZY A;  1JTA A;  4W8S A;  4XLE A;  2J8I A;  3T9G A;  3AK5 A;  1O8F A;  1IDK A;  1DBG A;  2UVF A;  4Z05 A;  2VFP A;  2XT2 A;  1K8F A;  3ZPP A;  4PMH A;  5JMC B;  1QQ1 A;  4XOP A;  2X3H A;  4XON A;  1O8G A;  1PLU A;  2BX6 A;  4NK6 A;  2V5I A;  2O6W A;  2IOU G;  1RMG A;  4YCQ A;  1RU4 A;  2YUH A;  3VSV A;  4XLF A;  2O1D A;  3SY2 A;  3RIQ A;  1NHC A;  2XT4 A;  1DBO A;  2X6W A; 
#chains in the Genus database with same CATH homology
 2VBE A;  1O8E A;  3GQ7 A;  1OFM A;  5C1C A;  1VBL A;  1BN8 A;  2O17 A;  1IDJ A;  1PE9 A;  1IA5 A;  4HWV A;  4NK8 A;  3JUR A;  2Z8G A;  1HG8 A;  4U49 A;  1QJV A;  1OOC A;  2VBM A;  5C1E A;  4U4B A;  2VJI A;  4XNF A;  4YZX A;  4XN3 A;  1OGO X;  1H80 A;  2QXZ A;  3GQ8 A;  3B90 A;  2PYG A;  4XL9 A;  3VMW A;  1GQ8 A;  3KRG A;  2NZM A;  3VST A;  4YZ0 A;  2NT6 A;  4URR A;  4XOR A;  4OJO A;  4XMY A;  2X85 A;  4OJP A;  2O0V A;  4MXN A;  3EQN A;  1O8H A;  1O8D A;  4YEL A;  4YZQ A;  4MR0 A;  2PYH A;  2INU A;  4XQF A;  1O8L A;  4I84 A;  1KTW A;  3GQ9 A;  2QY1 A;  3UW0 A;  4XLH A;  4AVZ A;  1RWR A;  2ODL A;  1OGM X;  2X6Y A;  4XKW A;  5AMV A;  1O8M A;  1O8J A;  1KCD A;  4OJL A;  2EWE A;  2NST A;  2VBK A;  3WWG A;  1OFL A;  1BHE A;  3B4N A;  2INV A;  2O0W A;  3ZSC A;  2UVE A;  2NTP A;  1AIR A;  4W8R A;  2X6X A;  2QX3 A;  4Z06 A;  4YZA A;  1XG2 A;  3EQO A;  4XOT A;  1O88 A;  3GQA A;  3LMW A;  1IB4 A;  1WMR A;  2O04 A;  4Z03 A;  1O8K A;  3VMV A;  4XLC A;  4YEJ A;  4XR6 A;  2BSP A;  2VJJ A;  1X0C A;  2PEC A;  4XKV A;  4EW9 A;  4W8Q A;  2NSP A;  2NT9 A;  1O8I A;  2NTQ A;  1K5C A;  1EE6 A;  4OJ6 A;  3FY3 A;  1CZF A;  2NTB A;  4W8T A;  2IQ7 A;  4OZZ A;  1PXZ A;  3GRH A;  4XM3 A;  4C2L A;  1JRG A;  1KCC A;  4XN0 A;  4OJ5 A;  3VSU A;  3B8Y A;  3SUC A;  1QCX A;  4XLA A;  4OZY A;  1JTA A;  4W8S A;  4XLE A;  3T9G A;  1O8F A;  1IDK A;  1DBG A;  2UVF A;  4Z05 A;  3ZPP A;  4PMH A;  4XOP A;  2X3H A;  4XON A;  1O8G A;  1PLU A;  4NK6 A;  1RMG A;  1RU4 A;  3VSV A;  1NHC A;  4XLF A;  2O1D A;  1DBO A;  2X6W A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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