1OGMX

Dex49a from penicillium minioluteum
Total Genus 184
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
184
sequence length
572
structure length
572
Chain Sequence
TTANTHCGADFCTWWHDSGEINTQTPVQPGNVRQSHKYSVQVSLAGTNNFHDSFVYESIPRNGNGRIYAPTDPPNSNTLDSSVDDGISIEPSIGLNMAWSQFEYSHDVDVKILATDGSSLGSPSDVVIRPVSISYAISQSDDGGIVIRVPADANGRKFSVEFKTDLYTFLSDGNEYVTSGGSVVGVEPTNALVIFASPFLPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords DEXTRANASE
publication title Dextranase from Penicillium Minioluteum. Reaction Course, Crystal Structure, and Product Complex
pubmed doi rcsb
source organism Penicillium minioluteum
molecule tags Hydrolase
total genus 184
structure length 572
sequence length 572
ec nomenclature ec 3.2.1.11: Dextranase.
pdb deposition date 2003-05-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
X PF17433 Glyco_hydro_49N Glycosyl hydrolase family 49 N-terminal Ig-like domain
X PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
X PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 1ogmX01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 1ogmX02
2NT6A 4Z05A 2INUA 3B90A 2NSTA 1RMGA 4XMYA 4XONA 1WMRA 4YELA 2ODLA 4PMHA 1OFLA 4W8TA 2BSPA 2NTPA 3GQAA 4XLAA 1BN8A 1KCDA 2PYHA 1PXZA 3FY3A 4U4BA 4EW9A 1BHEA 2IQ7A 1NHCA 5C1EA 3B4NA 4XL9A 4XN3A 1JRGA 4OZYA 1CZFA 3VSTA 1OGMX 1O88A 4W8SA 4XKVA 4OJPA 1PE9A 4XLFA 2VJIA 4XOPA 4XOTA 2NZMA 3LMWA 1O8IA 3ZPPA 3VMVA 3T9GA 2QY1A 1OFMA 1GQ8A 1O8KA 4HWVA 1KTWA 1DBOA 4XQFA 1DBGA 4Z03A 3VSUA 2O0WA 5AMVA 1O8EA 1PLUA 3GQ9A 2O1DA 4YZAA 1O8MA 3JURA 1QJVA 4AVZA 2NTBA 4I84A 2X85A 2INVA 2X6XA 4XM3A 1IA5A 4OJ5A 2NSPA 2QXZA 4OZZA 4OJ6A 4W8QA 4XR6A 1EE6A 4NK8A 3VMWA 4XLEA 3GRHA 4OJLA 4W8RA 1QCXA 1X0CA 1O8JA 3B8YA 1XG2A 4NK6A 1K5CA 1HG8A 1O8DA 4MR0A 1H80A 2PYGA 1RWRA 4MXNA 4XNFA 4URRA 3VSVA 3KRGA 1OOCA 1IDKA 4Z06A 2NTQA 2UVEA 5C1CA 4XKWA 1RU4A 2NT9A 4XLCA 2EWEA 4OJOA 4XORA 4YEJA 2O0VA 3GQ7A 4YZQA 4YZXA 2X6WA 1IDJA 2Z8GA 1JTAA 4XN0A 3ZSCA 1O8LA 1OGOX 1O8HA 2UVFA 2VBEA 3GQ8A 1KCCA 1VBLA 1O8FA 4C2LA 3SUCA 3WWGA 2QX3A 1AIRA 2O17A 4XLHA 3UW0A 2X6YA 2PECA 1IB4A 2X3HA 3EQOA 1O8GA 4YZ0A 2O04A 2VBKA 4U49A 2VBMA 3EQNA 2VJJA
chains in the Genus database with same CATH superfamily
3N90A 2NT6A 3PETA 4Z05A 2INUA 3B90A 3RIQA 3AK5A 2NSTA 1RMGA 2V5IA 3SY2A 3PSSA 2BM7A 4XMYA 4XONA 1WMRA 4YELA 2ODLA 4PMHA 1OFLA 2VFMA 2BSPA 2NTPA 2VFNA 3H09A 3GQAA 1KQ5A 4W8TA 3SYJA 3JX8A 4XLAA 1TYXA 1BN8A 2BM6A 1KCDA 2PYHA 4JRAC 1PXZA 3FY3A 3SZEA 4U4BA 3SQVA 4EW9A 2XT4A 1BHEA 2IQ7A 1NHCA 1QA3A 2O6WA 5C1EA 3B4NA 4XL9A 4YC5A 1TYWA 4XN3A 4KH3A 1JRGA 4OZYA 1LLZA 1CZFA 3VSTA 2VJJA 1OGMX 1O88A 4W8SA 1QA2A 4XKVA 4OJPA 1HF2A 1PE9A 3LYCA 4XLFA 1EA0A 2VJIA 4XOPA 3TH0A 1LLWA 4XOTA 1TYUA 2NZMA 3LMWA 2QZAA 1O8IA 3ZPPA 3VMVA 1QA1A 3T9GA 2J8IA 2QY1A 3N6ZA 1OFMA 1GQ8A 2QYUA 1O8KA 4HWVA 1KTWA 2BX6A 1DBOA 4XQFA 1TSPA 2XT2A 1DBGA 2BM5A 1QRBA 3BH7B 4Z03A 3VSUA 2O0WA 3NB2A 3LJYA 1O8EA 1PLUA 3GQ9A 2O1DA 3P4GA 1O8MA 1OFDA 2IOUG 4YZAA 3JURA 1QJVA 4V02C 4YCQA 2NTBA 4AVZA 1L1IA 4I84A 2X85A 2INVA 2X6XA 4XM3A 1IA5A 4OJ5A 2YUHA 2NSPA 2QXZA 4OZZA 1EZGA 2XTYA 1K8FA 1TYVA 4OJ6A 4W8QA 4XR6A 5JLVC 1EE6A 4NK8A 4YEIA 2VFOA 3VMWA 4OPWA 4XLEA 3GRHA 4OJLA 4W8RA 1QCXA 2XC1A 1X0CA 1O8JA 3B8YA 4YFOA 1XG2A 4NK6A 1K5CA 1HG8A 1O8DA 4MR0A 1H80A 1LM1A 3PSZA 2PYGA 3DU1X 1RWRA 4MXNA 4XNFA 3ML3A 4URRA 3VSVA 3KRGA 2BM4A 2XTXA 5JMCB 1OOCA 1IDKA 2W7ZA 4Z06A 2NTQA 1QRCA 2J8KA 2F3LA 2UVEA 5C1CA 4XKWA 1RU4A 2NT9A 4OM9A 4XLCA 1K4ZA 2EWEA 1QQ1A 4OJOA 1WXRA 2G0YA 5DNSA 4XORA 1CLWA 4YEJA 2O0VA 1OFEA 3GQ7A 4YZQA 4YZXA 2X6WA 1IDJA 2Z8GA 1JTAA 4XN0A 3ZSCA 1O8LA 2XTWA 1OGOX 1O8HA 2UVFA 2B0RA 2VBEA 3GQ8A 4YDTA 1KCCA 1VBLA 3BH6B 3NAWA 1O8FA 4C2LA 1DABA 3SUCA 5AMVA 3WWGA 2QX3A 1AIRA 2O17A 4XLHA 3UW0A 2X6YA 2PECA 1IB4A 2X3HA 3EQOA 1O8GA 4YZ0A 2O04A 2VBKA 4U49A 2VBMA 2VFPA 3EQNA 2VFQA
chains in the Genus database with same CATH topology
2NT6A 4Z05A 2INUA 3B90A 2NSTA 1RMGA 4XMYA 4XONA 1WMRA 4YELA 2ODLA 4PMHA 1OFLA 4W8TA 2BSPA 2NTPA 3GQAA 4XLAA 1BN8A 1KCDA 2PYHA 1PXZA 3FY3A 4U4BA 4EW9A 1BHEA 2IQ7A 1NHCA 5C1EA 3B4NA 4XL9A 4XN3A 1JRGA 4OZYA 1CZFA 3VSTA 1OGMX 1O88A 4W8SA 4XKVA 4OJPA 1PE9A 4XLFA 2VJIA 4XOPA 4XOTA 2NZMA 3LMWA 1O8IA 3ZPPA 3VMVA 3T9GA 2QY1A 1OFMA 1GQ8A 1O8KA 4HWVA 1KTWA 1DBOA 4XQFA 1DBGA 4Z03A 3VSUA 2O0WA 5AMVA 1O8EA 1PLUA 3GQ9A 2O1DA 4YZAA 1O8MA 3JURA 1QJVA 4AVZA 2NTBA 4I84A 2X85A 2INVA 2X6XA 4XM3A 1IA5A 4OJ5A 2NSPA 2QXZA 4OZZA 4OJ6A 4W8QA 4XR6A 1EE6A 4NK8A 3VMWA 4XLEA 3GRHA 4OJLA 4W8RA 1QCXA 1X0CA 1O8JA 3B8YA 1XG2A 4NK6A 1K5CA 1HG8A 1O8DA 4MR0A 1H80A 2PYGA 1RWRA 4MXNA 4XNFA 4URRA 3VSVA 3KRGA 1OOCA 1IDKA 4Z06A 2NTQA 2UVEA 5C1CA 4XKWA 1RU4A 2NT9A 4XLCA 2EWEA 4OJOA 4XORA 4YEJA 2O0VA 3GQ7A 4YZQA 4YZXA 2X6WA 1IDJA 2Z8GA 1JTAA 4XN0A 3ZSCA 1O8LA 1OGOX 1O8HA 2UVFA 2VBEA 3GQ8A 1KCCA 1VBLA 1O8FA 4C2LA 3SUCA 3WWGA 2QX3A 1AIRA 2O17A 4XLHA 3UW0A 2X6YA 2PECA 1IB4A 2X3HA 3EQOA 1O8GA 4YZ0A 2O04A 2VBKA 4U49A 2VBMA 3EQNA 2VJJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NT6 A;  4Z05 A;  2INU A;  3B90 A;  2NST A;  1RMG A;  4XMY A;  4XON A;  1WMR A;  4YEL A;  2ODL A;  4PMH A;  1OFL A;  4W8T A;  2BSP A;  2NTP A;  3GQA A;  4XLA A;  1BN8 A;  1KCD A;  2PYH A;  1PXZ A;  3FY3 A;  4U4B A;  4EW9 A;  1BHE A;  2IQ7 A;  1NHC A;  5C1E A;  3B4N A;  4XL9 A;  4XN3 A;  1JRG A;  4OZY A;  1CZF A;  3VST A;  1OGM X;  1O88 A;  4W8S A;  4XKV A;  4OJP A;  1PE9 A;  4XLF A;  2VJI A;  4XOP A;  4XOT A;  2NZM A;  3LMW A;  1O8I A;  3ZPP A;  3VMV A;  3T9G A;  2QY1 A;  1OFM A;  1GQ8 A;  1O8K A;  4HWV A;  1KTW A;  1DBO A;  4XQF A;  1DBG A;  4Z03 A;  3VSU A;  2O0W A;  5AMV A;  1O8E A;  1PLU A;  3GQ9 A;  2O1D A;  4YZA A;  1O8M A;  3JUR A;  1QJV A;  4AVZ A;  2NTB A;  4I84 A;  2X85 A;  2INV A;  2X6X A;  4XM3 A;  1IA5 A;  4OJ5 A;  2NSP A;  2QXZ A;  4OZZ A;  4OJ6 A;  4W8Q A;  4XR6 A;  1EE6 A;  4NK8 A;  3VMW A;  4XLE A;  3GRH A;  4OJL A;  4W8R A;  1QCX A;  1X0C A;  1O8J A;  3B8Y A;  1XG2 A;  4NK6 A;  1K5C A;  1HG8 A;  1O8D A;  4MR0 A;  1H80 A;  2PYG A;  1RWR A;  4MXN A;  4XNF A;  4URR A;  3VSV A;  3KRG A;  1OOC A;  1IDK A;  4Z06 A;  2NTQ A;  2UVE A;  5C1C A;  4XKW A;  1RU4 A;  2NT9 A;  4XLC A;  2EWE A;  4OJO A;  4XOR A;  4YEJ A;  2O0V A;  3GQ7 A;  4YZQ A;  4YZX A;  2X6W A;  1IDJ A;  2Z8G A;  1JTA A;  4XN0 A;  3ZSC A;  1O8L A;  1OGO X;  1O8H A;  2UVF A;  2VBE A;  3GQ8 A;  1KCC A;  1VBL A;  1O8F A;  4C2L A;  3SUC A;  3WWG A;  2QX3 A;  1AIR A;  2O17 A;  4XLH A;  3UW0 A;  2X6Y A;  2PEC A;  1IB4 A;  2X3H A;  3EQO A;  1O8G A;  4YZ0 A;  2O04 A;  2VBK A;  4U49 A;  2VBM A;  3EQN A;  2VJJ A; 
#chains in the Genus database with same CATH topology
 3N90 A;  2NT6 A;  3PET A;  4Z05 A;  2INU A;  3B90 A;  3RIQ A;  3AK5 A;  2NST A;  1RMG A;  2V5I A;  3SY2 A;  3PSS A;  2BM7 A;  4XMY A;  4XON A;  1WMR A;  4YEL A;  2ODL A;  4PMH A;  1OFL A;  2VFM A;  2BSP A;  2NTP A;  2VFN A;  3H09 A;  3GQA A;  1KQ5 A;  4W8T A;  3SYJ A;  3JX8 A;  4XLA A;  1TYX A;  1BN8 A;  2BM6 A;  1KCD A;  2PYH A;  4JRA C;  1PXZ A;  3FY3 A;  3SZE A;  4U4B A;  3SQV A;  4EW9 A;  2XT4 A;  1BHE A;  2IQ7 A;  1NHC A;  1QA3 A;  2O6W A;  5C1E A;  3B4N A;  4XL9 A;  4YC5 A;  1TYW A;  4XN3 A;  4KH3 A;  1JRG A;  4OZY A;  1LLZ A;  1CZF A;  3VST A;  2VJJ A;  1OGM X;  1O88 A;  4W8S A;  1QA2 A;  4XKV A;  4OJP A;  1HF2 A;  1PE9 A;  3LYC A;  4XLF A;  1EA0 A;  2VJI A;  4XOP A;  3TH0 A;  1LLW A;  4XOT A;  1TYU A;  2NZM A;  3LMW A;  2QZA A;  1O8I A;  3ZPP A;  3VMV A;  1QA1 A;  3T9G A;  2J8I A;  2QY1 A;  3N6Z A;  1OFM A;  1GQ8 A;  2QYU A;  1O8K A;  4HWV A;  1KTW A;  2BX6 A;  1DBO A;  4XQF A;  1TSP A;  2XT2 A;  1DBG A;  2BM5 A;  1QRB A;  3BH7 B;  4Z03 A;  3VSU A;  2O0W A;  3NB2 A;  3LJY A;  1O8E A;  1PLU A;  3GQ9 A;  2O1D A;  3P4G A;  1O8M A;  1OFD A;  2IOU G;  4YZA A;  3JUR A;  1QJV A;  4V02 C;  4YCQ A;  2NTB A;  4AVZ A;  1L1I A;  4I84 A;  2X85 A;  2INV A;  2X6X A;  4XM3 A;  1IA5 A;  4OJ5 A;  2YUH A;  2NSP A;  2QXZ A;  4OZZ A;  1EZG A;  2XTY A;  1K8F A;  1TYV A;  4OJ6 A;  4W8Q A;  4XR6 A;  5JLV C;  1EE6 A;  4NK8 A;  4YEI A;  2VFO A;  3VMW A;  4OPW A;  4XLE A;  3GRH A;  4OJL A;  4W8R A;  1QCX A;  2XC1 A;  1X0C A;  1O8J A;  3B8Y A;  4YFO A;  1XG2 A;  4NK6 A;  1K5C A;  1HG8 A;  1O8D A;  4MR0 A;  1H80 A;  1LM1 A;  3PSZ A;  2PYG A;  3DU1 X;  1RWR A;  4MXN A;  4XNF A;  3ML3 A;  4URR A;  3VSV A;  3KRG A;  2BM4 A;  2XTX A;  5JMC B;  1OOC A;  1IDK A;  2W7Z A;  4Z06 A;  2NTQ A;  1QRC A;  2J8K A;  2F3L A;  2UVE A;  5C1C A;  4XKW A;  1RU4 A;  2NT9 A;  4OM9 A;  4XLC A;  1K4Z A;  2EWE A;  1QQ1 A;  4OJO A;  1WXR A;  2G0Y A;  5DNS A;  4XOR A;  1CLW A;  4YEJ A;  2O0V A;  1OFE A;  3GQ7 A;  4YZQ A;  4YZX A;  2X6W A;  1IDJ A;  2Z8G A;  1JTA A;  4XN0 A;  3ZSC A;  1O8L A;  2XTW A;  1OGO X;  1O8H A;  2UVF A;  2B0R A;  2VBE A;  3GQ8 A;  4YDT A;  1KCC A;  1VBL A;  3BH6 B;  3NAW A;  1O8F A;  4C2L A;  1DAB A;  3SUC A;  5AMV A;  3WWG A;  2QX3 A;  1AIR A;  2O17 A;  4XLH A;  3UW0 A;  2X6Y A;  2PEC A;  1IB4 A;  2X3H A;  3EQO A;  1O8G A;  4YZ0 A;  2O04 A;  2VBK A;  4U49 A;  2VBM A;  2VFP A;  3EQN A;  2VFQ A; 
#chains in the Genus database with same CATH homology
 2NT6 A;  4Z05 A;  2INU A;  3B90 A;  2NST A;  1RMG A;  4XMY A;  4XON A;  1WMR A;  4YEL A;  2ODL A;  4PMH A;  1OFL A;  4W8T A;  2BSP A;  2NTP A;  3GQA A;  4XLA A;  1BN8 A;  1KCD A;  2PYH A;  1PXZ A;  3FY3 A;  4U4B A;  4EW9 A;  1BHE A;  2IQ7 A;  1NHC A;  5C1E A;  3B4N A;  4XL9 A;  4XN3 A;  1JRG A;  4OZY A;  1CZF A;  3VST A;  1OGM X;  1O88 A;  4W8S A;  4XKV A;  4OJP A;  1PE9 A;  4XLF A;  2VJI A;  4XOP A;  4XOT A;  2NZM A;  3LMW A;  1O8I A;  3ZPP A;  3VMV A;  3T9G A;  2QY1 A;  1OFM A;  1GQ8 A;  1O8K A;  4HWV A;  1KTW A;  1DBO A;  4XQF A;  1DBG A;  4Z03 A;  3VSU A;  2O0W A;  5AMV A;  1O8E A;  1PLU A;  3GQ9 A;  2O1D A;  4YZA A;  1O8M A;  3JUR A;  1QJV A;  4AVZ A;  2NTB A;  4I84 A;  2X85 A;  2INV A;  2X6X A;  4XM3 A;  1IA5 A;  4OJ5 A;  2NSP A;  2QXZ A;  4OZZ A;  4OJ6 A;  4W8Q A;  4XR6 A;  1EE6 A;  4NK8 A;  3VMW A;  4XLE A;  3GRH A;  4OJL A;  4W8R A;  1QCX A;  1X0C A;  1O8J A;  3B8Y A;  1XG2 A;  4NK6 A;  1K5C A;  1HG8 A;  1O8D A;  4MR0 A;  1H80 A;  2PYG A;  1RWR A;  4MXN A;  4XNF A;  4URR A;  3VSV A;  3KRG A;  1OOC A;  1IDK A;  4Z06 A;  2NTQ A;  2UVE A;  5C1C A;  4XKW A;  1RU4 A;  2NT9 A;  4XLC A;  2EWE A;  4OJO A;  4XOR A;  4YEJ A;  2O0V A;  3GQ7 A;  4YZQ A;  4YZX A;  2X6W A;  1IDJ A;  2Z8G A;  1JTA A;  4XN0 A;  3ZSC A;  1O8L A;  1OGO X;  1O8H A;  2UVF A;  2VBE A;  3GQ8 A;  1KCC A;  1VBL A;  1O8F A;  4C2L A;  3SUC A;  3WWG A;  2QX3 A;  1AIR A;  2O17 A;  4XLH A;  3UW0 A;  2X6Y A;  2PEC A;  1IB4 A;  2X3H A;  3EQO A;  1O8G A;  4YZ0 A;  2O04 A;  2VBK A;  4U49 A;  2VBM A;  3EQN A;  2VJJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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