3WWGA

Crystal structure of the n-glycan-deficient variant n448a of isopullulanase complexed with isopanose
Total Genus 184
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
184
sequence length
547
structure length
536
Chain Sequence
FMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYASAHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Isopullulanase
publication title The side chain of a glycosylated asparagine residue is important for the stability of isopullulanase
pubmed doi rcsb
source organism Aspergillus niger
molecule tags Hydrolase
total genus 184
structure length 536
sequence length 547
chains with identical sequence B, C, D
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 3wwgA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3wwgA02
1O8DA 1KCCA 2O0VA 1BN8A 2X85A 4HWVA 4W8RA 4XN3A 1O8IA 4W8QA 2VBEA 1VBLA 1OGOX 1PXZA 3ZSCA 1O8MA 4XONA 4XM3A 4XR6A 1EE6A 1JTAA 1RMGA 2PYGA 3EQOA 4MR0A 3KRGA 2UVEA 2X6YA 4EW9A 1IA5A 1O8KA 1PE9A 3UW0A 2UVFA 4Z05A 2INUA 2NTBA 2NSTA 3ZPPA 5AMVA 1JRGA 1O8LA 1O88A 2INVA 4NK6A 4OJOA 3LMWA 1DBOA 1OFLA 2O1DA 2X6XA 2QX3A 4URRA 4YZQA 4I84A 1NHCA 1OGMX 5C1EA 3VMVA 3GQ9A 2VBMA 2VJIA 2PECA 4OZZA 4XNFA 1O8JA 4YELA 3VSVA 2BSPA 1AIRA 3FY3A 3T9GA 4XOTA 4XORA 1KCDA 4YZAA 2PYHA 1H80A 5C1CA 4XOPA 1GQ8A 1IDKA 1XG2A 4U49A 3VMWA 2VJJA 4AVZA 1QJVA 2NZMA 1WMRA 3WWGA 3JURA 3SUCA 4C2LA 3B4NA 3GRHA 2NT9A 4Z06A 2EWEA 2QY1A 2Z8GA 3GQAA 4OJ5A 1RWRA 2O0WA 1OFMA 4Z03A 4OJ6A 4XL9A 1IB4A 1KTWA 3VSUA 1O8GA 4U4BA 4OZYA 4XLEA 1CZFA 3B8YA 4W8TA 4XMYA 4YZ0A 2IQ7A 4XKWA 4W8SA 3GQ8A 3VSTA 2NT6A 2X3HA 4MXNA 2NTPA 4XLHA 4OJLA 4PMHA 4OJPA 1O8FA 1PLUA 4NK8A 2X6WA 2O17A 4XN0A 4XKVA 1O8HA 1X0CA 2VBKA 3GQ7A 1HG8A 1BHEA 2O04A 4XLAA 2QXZA 1K5CA 1OOCA 4XLFA 4YEJA 1QCXA 3EQNA 4XQFA 2NTQA 1IDJA 1DBGA 2NSPA 4YZXA 4XLCA 3B90A 1O8EA 2ODLA 1RU4A
chains in the Genus database with same CATH superfamily
1O8DA 2VFNA 2O0VA 3P4GA 1KCCA 1BN8A 2X85A 4HWVA 4W8RA 4XN3A 1O8IA 4W8QA 2VBEA 1VBLA 1OGOX 1PXZA 3ZSCA 1O8MA 4XONA 4XM3A 3NAWA 4XR6A 1EE6A 1JTAA 1CLWA 1RMGA 2PYGA 3SZEA 3EQOA 3DU1X 1QRBA 1K8FA 4MR0A 3KRGA 2UVEA 3PSZA 2XT2A 2X6YA 4EW9A 1IA5A 1O8KA 1LM1A 1PE9A 1TYVA 2BX6A 2J8IA 2UVFA 2W7ZA 3LJYA 4Z05A 3UW0A 2INUA 2VFOA 3N6ZA 2NTBA 2QYUA 2NSTA 3ZPPA 5AMVA 1JRGA 1O8LA 1O88A 3SY2A 5DNSA 2INVA 4NK6A 4OJOA 3LMWA 1DBOA 2J8KA 4V02C 1OFLA 2O1DA 2X6XA 1WXRA 2QX3A 4URRA 4YZQA 4I84A 2XTWA 1QQ1A 1OGMX 1LLWA 2QZAA 2YUHA 1NHCA 5C1EA 3VMVA 3GQ9A 2VBMA 2BM5A 2VJIA 2V5IA 5JLVC 2IOUG 2PECA 4OZZA 1O8JA 4XNFA 3JX8A 3PETA 2BSPA 4YELA 3VSVA 1AIRA 2XT4A 3FY3A 3T9GA 3ML3A 2XC1A 4XOTA 4XORA 3SYJA 3AK5A 3BH7B 1QA1A 3H09A 2VFPA 1KCDA 2O6WA 4YZAA 2PYHA 1H80A 4JRAC 5C1CA 4XOPA 4YDTA 1GQ8A 1IDKA 1XG2A 1OFDA 3NB2A 4KH3A 1TYXA 1DABA 1HF2A 4U49A 3VMWA 2VJJA 4AVZA 1QJVA 2BM6A 2NZMA 1WMRA 3WWGA 4YFOA 3JURA 3SUCA 4C2LA 2F3LA 3B4NA 1EZGA 2NT9A 3GRHA 4YC5A 4Z06A 2EWEA 2QY1A 2Z8GA 1QRCA 3GQAA 3TH0A 4OJ5A 1RWRA 2O0WA 1OFMA 4OPWA 4Z03A 4OJ6A 3N90A 4XL9A 1TYWA 3PSSA 1IB4A 2XTXA 1KTWA 3VSUA 1L1IA 1O8GA 4U4BA 2G0YA 1OFEA 4OZYA 4XLEA 1CZFA 4OM9A 3B8YA 1KQ5A 4W8TA 1TYUA 4XMYA 4YZ0A 2IQ7A 4XKWA 4W8SA 2BM7A 3GQ8A 3VSTA 3LYCA 2NT6A 2X3HA 4MXNA 2NTPA 2XTYA 4XLHA 4OJLA 4PMHA 4OJPA 1O8FA 2VFMA 1PLUA 4NK8A 3RIQA 2X6WA 2O17A 4XN0A 4XKVA 1O8HA 3BH6B 1X0CA 2VBKA 3GQ7A 1HG8A 1BHEA 1QA3A 2O04A 1K4ZA 2QXZA 4XLAA 1OOCA 1K5CA 4XLFA 4YCQA 4YEJA 1QCXA 1TSPA 3EQNA 4XQFA 1IDJA 1DBGA 2NTQA 2NSPA 4YZXA 1QA2A 4XLCA 3B90A 2BM4A 1LLZA 2B0RA 3SQVA 4YEIA 1EA0A 1O8EA 5JMCB 2ODLA 1RU4A 2VFQA
chains in the Genus database with same CATH topology
1O8DA 1KCCA 2O0VA 1BN8A 2X85A 4HWVA 4W8RA 4XN3A 1O8IA 4W8QA 2VBEA 1VBLA 1OGOX 1PXZA 3ZSCA 1O8MA 4XONA 4XM3A 4XR6A 1EE6A 1JTAA 1RMGA 2PYGA 3EQOA 4MR0A 3KRGA 2UVEA 2X6YA 4EW9A 1IA5A 1O8KA 1PE9A 3UW0A 2UVFA 4Z05A 2INUA 2NTBA 2NSTA 3ZPPA 5AMVA 1JRGA 1O8LA 1O88A 2INVA 4NK6A 4OJOA 3LMWA 1DBOA 1OFLA 2O1DA 2X6XA 2QX3A 4URRA 4YZQA 4I84A 1NHCA 1OGMX 5C1EA 3VMVA 3GQ9A 2VBMA 2VJIA 2PECA 4OZZA 4XNFA 1O8JA 4YELA 3VSVA 2BSPA 1AIRA 3FY3A 3T9GA 4XOTA 4XORA 1KCDA 4YZAA 2PYHA 1H80A 5C1CA 4XOPA 1GQ8A 1IDKA 1XG2A 4U49A 3VMWA 2VJJA 4AVZA 1QJVA 2NZMA 1WMRA 3WWGA 3JURA 3SUCA 4C2LA 3B4NA 3GRHA 2NT9A 4Z06A 2EWEA 2QY1A 2Z8GA 3GQAA 4OJ5A 1RWRA 2O0WA 1OFMA 4Z03A 4OJ6A 4XL9A 1IB4A 1KTWA 3VSUA 1O8GA 4U4BA 4OZYA 4XLEA 1CZFA 3B8YA 4W8TA 4XMYA 4YZ0A 2IQ7A 4XKWA 4W8SA 3GQ8A 3VSTA 2NT6A 2X3HA 4MXNA 2NTPA 4XLHA 4OJLA 4PMHA 4OJPA 1O8FA 1PLUA 4NK8A 2X6WA 2O17A 4XN0A 4XKVA 1O8HA 1X0CA 2VBKA 3GQ7A 1HG8A 1BHEA 2O04A 4XLAA 2QXZA 1K5CA 1OOCA 4XLFA 4YEJA 1QCXA 3EQNA 4XQFA 2NTQA 1IDJA 1DBGA 2NSPA 4YZXA 4XLCA 3B90A 1O8EA 2ODLA 1RU4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1O8D A;  1KCC A;  2O0V A;  1BN8 A;  2X85 A;  4HWV A;  4W8R A;  4XN3 A;  1O8I A;  4W8Q A;  2VBE A;  1VBL A;  1OGO X;  1PXZ A;  3ZSC A;  1O8M A;  4XON A;  4XM3 A;  4XR6 A;  1EE6 A;  1JTA A;  1RMG A;  2PYG A;  3EQO A;  4MR0 A;  3KRG A;  2UVE A;  2X6Y A;  4EW9 A;  1IA5 A;  1O8K A;  1PE9 A;  3UW0 A;  2UVF A;  4Z05 A;  2INU A;  2NTB A;  2NST A;  3ZPP A;  5AMV A;  1JRG A;  1O8L A;  1O88 A;  2INV A;  4NK6 A;  4OJO A;  3LMW A;  1DBO A;  1OFL A;  2O1D A;  2X6X A;  2QX3 A;  4URR A;  4YZQ A;  4I84 A;  1NHC A;  1OGM X;  5C1E A;  3VMV A;  3GQ9 A;  2VBM A;  2VJI A;  2PEC A;  4OZZ A;  4XNF A;  1O8J A;  4YEL A;  3VSV A;  2BSP A;  1AIR A;  3FY3 A;  3T9G A;  4XOT A;  4XOR A;  1KCD A;  4YZA A;  2PYH A;  1H80 A;  5C1C A;  4XOP A;  1GQ8 A;  1IDK A;  1XG2 A;  4U49 A;  3VMW A;  2VJJ A;  4AVZ A;  1QJV A;  2NZM A;  1WMR A;  3WWG A;  3JUR A;  3SUC A;  4C2L A;  3B4N A;  3GRH A;  2NT9 A;  4Z06 A;  2EWE A;  2QY1 A;  2Z8G A;  3GQA A;  4OJ5 A;  1RWR A;  2O0W A;  1OFM A;  4Z03 A;  4OJ6 A;  4XL9 A;  1IB4 A;  1KTW A;  3VSU A;  1O8G A;  4U4B A;  4OZY A;  4XLE A;  1CZF A;  3B8Y A;  4W8T A;  4XMY A;  4YZ0 A;  2IQ7 A;  4XKW A;  4W8S A;  3GQ8 A;  3VST A;  2NT6 A;  2X3H A;  4MXN A;  2NTP A;  4XLH A;  4OJL A;  4PMH A;  4OJP A;  1O8F A;  1PLU A;  4NK8 A;  2X6W A;  2O17 A;  4XN0 A;  4XKV A;  1O8H A;  1X0C A;  2VBK A;  3GQ7 A;  1HG8 A;  1BHE A;  2O04 A;  4XLA A;  2QXZ A;  1K5C A;  1OOC A;  4XLF A;  4YEJ A;  1QCX A;  3EQN A;  4XQF A;  2NTQ A;  1IDJ A;  1DBG A;  2NSP A;  4YZX A;  4XLC A;  3B90 A;  1O8E A;  2ODL A;  1RU4 A; 
#chains in the Genus database with same CATH topology
 1O8D A;  2VFN A;  2O0V A;  3P4G A;  1KCC A;  1BN8 A;  2X85 A;  4HWV A;  4W8R A;  4XN3 A;  1O8I A;  4W8Q A;  2VBE A;  1VBL A;  1OGO X;  1PXZ A;  3ZSC A;  1O8M A;  4XON A;  4XM3 A;  3NAW A;  4XR6 A;  1EE6 A;  1JTA A;  1CLW A;  1RMG A;  2PYG A;  3SZE A;  3EQO A;  3DU1 X;  1QRB A;  1K8F A;  4MR0 A;  3KRG A;  2UVE A;  3PSZ A;  2XT2 A;  2X6Y A;  4EW9 A;  1IA5 A;  1O8K A;  1LM1 A;  1PE9 A;  1TYV A;  2BX6 A;  2J8I A;  2UVF A;  2W7Z A;  3LJY A;  4Z05 A;  3UW0 A;  2INU A;  2VFO A;  3N6Z A;  2NTB A;  2QYU A;  2NST A;  3ZPP A;  5AMV A;  1JRG A;  1O8L A;  1O88 A;  3SY2 A;  5DNS A;  2INV A;  4NK6 A;  4OJO A;  3LMW A;  1DBO A;  2J8K A;  4V02 C;  1OFL A;  2O1D A;  2X6X A;  1WXR A;  2QX3 A;  4URR A;  4YZQ A;  4I84 A;  2XTW A;  1QQ1 A;  1OGM X;  1LLW A;  2QZA A;  2YUH A;  1NHC A;  5C1E A;  3VMV A;  3GQ9 A;  2VBM A;  2BM5 A;  2VJI A;  2V5I A;  5JLV C;  2IOU G;  2PEC A;  4OZZ A;  1O8J A;  4XNF A;  3JX8 A;  3PET A;  2BSP A;  4YEL A;  3VSV A;  1AIR A;  2XT4 A;  3FY3 A;  3T9G A;  3ML3 A;  2XC1 A;  4XOT A;  4XOR A;  3SYJ A;  3AK5 A;  3BH7 B;  1QA1 A;  3H09 A;  2VFP A;  1KCD A;  2O6W A;  4YZA A;  2PYH A;  1H80 A;  4JRA C;  5C1C A;  4XOP A;  4YDT A;  1GQ8 A;  1IDK A;  1XG2 A;  1OFD A;  3NB2 A;  4KH3 A;  1TYX A;  1DAB A;  1HF2 A;  4U49 A;  3VMW A;  2VJJ A;  4AVZ A;  1QJV A;  2BM6 A;  2NZM A;  1WMR A;  3WWG A;  4YFO A;  3JUR A;  3SUC A;  4C2L A;  2F3L A;  3B4N A;  1EZG A;  2NT9 A;  3GRH A;  4YC5 A;  4Z06 A;  2EWE A;  2QY1 A;  2Z8G A;  1QRC A;  3GQA A;  3TH0 A;  4OJ5 A;  1RWR A;  2O0W A;  1OFM A;  4OPW A;  4Z03 A;  4OJ6 A;  3N90 A;  4XL9 A;  1TYW A;  3PSS A;  1IB4 A;  2XTX A;  1KTW A;  3VSU A;  1L1I A;  1O8G A;  4U4B A;  2G0Y A;  1OFE A;  4OZY A;  4XLE A;  1CZF A;  4OM9 A;  3B8Y A;  1KQ5 A;  4W8T A;  1TYU A;  4XMY A;  4YZ0 A;  2IQ7 A;  4XKW A;  4W8S A;  2BM7 A;  3GQ8 A;  3VST A;  3LYC A;  2NT6 A;  2X3H A;  4MXN A;  2NTP A;  2XTY A;  4XLH A;  4OJL A;  4PMH A;  4OJP A;  1O8F A;  2VFM A;  1PLU A;  4NK8 A;  3RIQ A;  2X6W A;  2O17 A;  4XN0 A;  4XKV A;  1O8H A;  3BH6 B;  1X0C A;  2VBK A;  3GQ7 A;  1HG8 A;  1BHE A;  1QA3 A;  2O04 A;  1K4Z A;  2QXZ A;  4XLA A;  1OOC A;  1K5C A;  4XLF A;  4YCQ A;  4YEJ A;  1QCX A;  1TSP A;  3EQN A;  4XQF A;  1IDJ A;  1DBG A;  2NTQ A;  2NSP A;  4YZX A;  1QA2 A;  4XLC A;  3B90 A;  2BM4 A;  1LLZ A;  2B0R A;  3SQV A;  4YEI A;  1EA0 A;  1O8E A;  5JMC B;  2ODL A;  1RU4 A;  2VFQ A; 
#chains in the Genus database with same CATH homology
 1O8D A;  1KCC A;  2O0V A;  1BN8 A;  2X85 A;  4HWV A;  4W8R A;  4XN3 A;  1O8I A;  4W8Q A;  2VBE A;  1VBL A;  1OGO X;  1PXZ A;  3ZSC A;  1O8M A;  4XON A;  4XM3 A;  4XR6 A;  1EE6 A;  1JTA A;  1RMG A;  2PYG A;  3EQO A;  4MR0 A;  3KRG A;  2UVE A;  2X6Y A;  4EW9 A;  1IA5 A;  1O8K A;  1PE9 A;  3UW0 A;  2UVF A;  4Z05 A;  2INU A;  2NTB A;  2NST A;  3ZPP A;  5AMV A;  1JRG A;  1O8L A;  1O88 A;  2INV A;  4NK6 A;  4OJO A;  3LMW A;  1DBO A;  1OFL A;  2O1D A;  2X6X A;  2QX3 A;  4URR A;  4YZQ A;  4I84 A;  1NHC A;  1OGM X;  5C1E A;  3VMV A;  3GQ9 A;  2VBM A;  2VJI A;  2PEC A;  4OZZ A;  4XNF A;  1O8J A;  4YEL A;  3VSV A;  2BSP A;  1AIR A;  3FY3 A;  3T9G A;  4XOT A;  4XOR A;  1KCD A;  4YZA A;  2PYH A;  1H80 A;  5C1C A;  4XOP A;  1GQ8 A;  1IDK A;  1XG2 A;  4U49 A;  3VMW A;  2VJJ A;  4AVZ A;  1QJV A;  2NZM A;  1WMR A;  3WWG A;  3JUR A;  3SUC A;  4C2L A;  3B4N A;  3GRH A;  2NT9 A;  4Z06 A;  2EWE A;  2QY1 A;  2Z8G A;  3GQA A;  4OJ5 A;  1RWR A;  2O0W A;  1OFM A;  4Z03 A;  4OJ6 A;  4XL9 A;  1IB4 A;  1KTW A;  3VSU A;  1O8G A;  4U4B A;  4OZY A;  4XLE A;  1CZF A;  3B8Y A;  4W8T A;  4XMY A;  4YZ0 A;  2IQ7 A;  4XKW A;  4W8S A;  3GQ8 A;  3VST A;  2NT6 A;  2X3H A;  4MXN A;  2NTP A;  4XLH A;  4OJL A;  4PMH A;  4OJP A;  1O8F A;  1PLU A;  4NK8 A;  2X6W A;  2O17 A;  4XN0 A;  4XKV A;  1O8H A;  1X0C A;  2VBK A;  3GQ7 A;  1HG8 A;  1BHE A;  2O04 A;  4XLA A;  2QXZ A;  1K5C A;  1OOC A;  4XLF A;  4YEJ A;  1QCX A;  3EQN A;  4XQF A;  2NTQ A;  1IDJ A;  1DBG A;  2NSP A;  4YZX A;  4XLC A;  3B90 A;  1O8E A;  2ODL A;  1RU4 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...