3WWGA

Crystal structure of the n-glycan-deficient variant n448a of isopullulanase complexed with isopanose
Total Genus 184
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
184
sequence length
547
structure length
536
Chain Sequence
FMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYASAHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Isopullulanase
publication title The side chain of a glycosylated asparagine residue is important for the stability of isopullulanase
pubmed doi rcsb
source organism Aspergillus niger
molecule tags Hydrolase
total genus 184
structure length 536
sequence length 547
chains with identical sequence B, C, D
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 3wwgA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3wwgA02
1QCXA 2QY1A 4XKVA 4YZ0A 1IDKA 3JURA 1DBGA 1OGMX 2VBKA 3T9GA 2NZMA 3EQNA 1X0CA 1WMRA 5AMVA 1VBLA 1O8IA 4MR0A 1O88A 2BSPA 1CZFA 4OZYA 4XORA 4U4BA 3FY3A 1OFLA 4W8SA 1O8KA 4XLHA 4XLAA 2IQ7A 4W8RA 2PYGA 3GRHA 1QJVA 4YEJA 2UVFA 1IB4A 4XN3A 1GQ8A 1KTWA 2VBMA 2NTBA 1IDJA 4U49A 1JRGA 3KRGA 2QXZA 1O8EA 2PECA 2O0WA 2X6WA 3LMWA 4PMHA 1XG2A 2NTPA 2UVEA 1O8LA 4Z03A 1PLUA 4YZQA 1AIRA 2O0VA 4NK6A 2ODLA 4OJ5A 3ZPPA 4XM3A 4XQFA 4XLEA 2QX3A 3GQ7A 1O8DA 2O17A 4XR6A 3B8YA 3VSTA 3VSUA 1PXZA 2X3HA 2NT9A 1EE6A 4AVZA 3VMWA 5C1CA 2NSTA 4XMYA 2INUA 2NSPA 2NT6A 1O8JA 3GQ8A 1JTAA 3ZSCA 1KCCA 4XNFA 1O8GA 1HG8A 4OJ6A 1OFMA 4XOTA 2VJIA 1O8HA 2X6XA 4EW9A 1KCDA 2O1DA 1BN8A 3VSVA 3GQAA 3WWGA 2VJJA 4OZZA 4OJLA 4YELA 5C1EA 4I84A 2INVA 4XL9A 4MXNA 4W8TA 1K5CA 3VMVA 1BHEA 4XN0A 2O04A 4Z06A 3UW0A 2Z8GA 4OJPA 1OOCA 4OJOA 1DBOA 1RWRA 4XKWA 4NK8A 2VBEA 1RU4A 2X6YA 4C2LA 2NTQA 4XOPA 3B90A 1H80A 1O8MA 4YZXA 3EQOA 4XONA 1NHCA 2PYHA 3SUCA 3B4NA 2X85A 4Z05A 1O8FA 2EWEA 4URRA 4HWVA 1OGOX 4W8QA 1PE9A 3GQ9A 4XLFA 4YZAA 1IA5A 4XLCA 1RMGA
chains in the Genus database with same CATH superfamily
2XT4A 1QCXA 4KH3A 2QY1A 3N6ZA 4XKVA 1IDKA 4YZ0A 5JLVC 1LM1A 1L1IA 3JURA 3PETA 3SQVA 1DBGA 1OGMX 1TYVA 2VBKA 4OM9A 3T9GA 2XC1A 5DNSA 2NZMA 3NB2A 3EQNA 4YFOA 1X0CA 1WMRA 5AMVA 1VBLA 1O8IA 4MR0A 1O88A 2BSPA 1OFDA 1CZFA 3NAWA 4OZYA 2YUHA 4XORA 1LLWA 4U4BA 1K8FA 3FY3A 3ML3A 1TYXA 3LYCA 1OFLA 4W8SA 1O8KA 4XLHA 4XLAA 2IQ7A 4W8RA 2PYGA 3GRHA 1QJVA 4YEJA 2BM6A 2B0RA 2UVFA 3SZEA 4JRAC 2W7ZA 1IB4A 4XN3A 1GQ8A 1KTWA 2VBMA 2NTBA 1IDJA 2VFPA 4U49A 1JRGA 3PSSA 2VFNA 3KRGA 2QXZA 4YDTA 1O8EA 2PECA 2XTXA 1KCCA 2O0WA 2X6WA 3LMWA 4PMHA 1XG2A 1QRCA 2NTPA 2UVEA 3AK5A 1O8LA 4Z03A 1PLUA 4YZQA 1AIRA 2O0VA 4NK6A 2ODLA 3BH7B 4OJ5A 3ZPPA 1QA1A 2G0YA 3DU1X 4YC5A 1OFEA 4XM3A 4XQFA 4XLEA 2BM4A 2QX3A 3GQ7A 1O8DA 2O17A 3JX8A 4XR6A 3B8YA 1QRBA 3VSTA 3VSUA 1PXZA 2X3HA 2BM7A 2NT9A 1EE6A 2VFOA 4AVZA 3VMWA 5C1CA 3N90A 2O6WA 3SY2A 2NSTA 4YEIA 4XMYA 1TSPA 2INUA 2NSPA 2NT6A 1O8JA 3RIQA 1TYUA 3GQ8A 3BH6B 3LJYA 2J8IA 1JTAA 2IOUG 4YCQA 3ZSCA 4XNFA 1K4ZA 1HG8A 1O8GA 2V5IA 1OFMA 4OJ6A 2VJIA 1O8HA 4XOTA 2J8KA 2X6XA 4EW9A 1KCDA 1HF2A 1BN8A 2O1DA 2QZAA 3WWGA 2VJJA 3GQAA 4OZZA 4OJLA 4YELA 5C1EA 3VSVA 4I84A 2INVA 4XL9A 4V02C 4MXNA 4W8TA 1K5CA 3VMVA 1CLWA 1BHEA 4XN0A 2BX6A 2O04A 4Z06A 1QA3A 3UW0A 2Z8GA 4OJPA 1OOCA 3TH0A 2BM5A 4OJOA 1DBOA 1RWRA 4XKWA 4NK8A 2VBEA 1RU4A 2X6YA 4C2LA 2NTQA 4XOPA 1QA2A 1KQ5A 4OPWA 3B90A 1H80A 1O8MA 4YZXA 3EQOA 2XTWA 1EA0A 4XONA 2XT2A 3H09A 1WXRA 2VFQA 1NHCA 2PYHA 2XTYA 3SUCA 1EZGA 1DABA 1QQ1A 3B4NA 2F3LA 2X85A 4Z05A 1O8FA 2EWEA 4URRA 4HWVA 3P4GA 1OGOX 2QYUA 3SYJA 4W8QA 1PE9A 1TYWA 5JMCB 3PSZA 1LLZA 3GQ9A 4XLFA 4YZAA 1IA5A 4XLCA 2VFMA 1RMGA
chains in the Genus database with same CATH topology
1QCXA 2QY1A 4XKVA 4YZ0A 1IDKA 3JURA 1DBGA 1OGMX 2VBKA 3T9GA 2NZMA 3EQNA 1X0CA 1WMRA 5AMVA 1VBLA 1O8IA 4MR0A 1O88A 2BSPA 1CZFA 4OZYA 4XORA 4U4BA 3FY3A 1OFLA 4W8SA 1O8KA 4XLHA 4XLAA 2IQ7A 4W8RA 2PYGA 3GRHA 1QJVA 4YEJA 2UVFA 1IB4A 4XN3A 1GQ8A 1KTWA 2VBMA 2NTBA 1IDJA 4U49A 1JRGA 3KRGA 2QXZA 1O8EA 2PECA 2O0WA 2X6WA 3LMWA 4PMHA 1XG2A 2NTPA 2UVEA 1O8LA 4Z03A 1PLUA 4YZQA 1AIRA 2O0VA 4NK6A 2ODLA 4OJ5A 3ZPPA 4XM3A 4XQFA 4XLEA 2QX3A 3GQ7A 1O8DA 2O17A 4XR6A 3B8YA 3VSTA 3VSUA 1PXZA 2X3HA 2NT9A 1EE6A 4AVZA 3VMWA 5C1CA 2NSTA 4XMYA 2INUA 2NSPA 2NT6A 1O8JA 3GQ8A 1JTAA 3ZSCA 1KCCA 4XNFA 1O8GA 1HG8A 4OJ6A 1OFMA 4XOTA 2VJIA 1O8HA 2X6XA 4EW9A 1KCDA 2O1DA 1BN8A 3VSVA 3GQAA 3WWGA 2VJJA 4OZZA 4OJLA 4YELA 5C1EA 4I84A 2INVA 4XL9A 4MXNA 4W8TA 1K5CA 3VMVA 1BHEA 4XN0A 2O04A 4Z06A 3UW0A 2Z8GA 4OJPA 1OOCA 4OJOA 1DBOA 1RWRA 4XKWA 4NK8A 2VBEA 1RU4A 2X6YA 4C2LA 2NTQA 4XOPA 3B90A 1H80A 1O8MA 4YZXA 3EQOA 4XONA 1NHCA 2PYHA 3SUCA 3B4NA 2X85A 4Z05A 1O8FA 2EWEA 4URRA 4HWVA 1OGOX 4W8QA 1PE9A 3GQ9A 4XLFA 4YZAA 1IA5A 4XLCA 1RMGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QCX A;  2QY1 A;  4XKV A;  4YZ0 A;  1IDK A;  3JUR A;  1DBG A;  1OGM X;  2VBK A;  3T9G A;  2NZM A;  3EQN A;  1X0C A;  1WMR A;  5AMV A;  1VBL A;  1O8I A;  4MR0 A;  1O88 A;  2BSP A;  1CZF A;  4OZY A;  4XOR A;  4U4B A;  3FY3 A;  1OFL A;  4W8S A;  1O8K A;  4XLH A;  4XLA A;  2IQ7 A;  4W8R A;  2PYG A;  3GRH A;  1QJV A;  4YEJ A;  2UVF A;  1IB4 A;  4XN3 A;  1GQ8 A;  1KTW A;  2VBM A;  2NTB A;  1IDJ A;  4U49 A;  1JRG A;  3KRG A;  2QXZ A;  1O8E A;  2PEC A;  2O0W A;  2X6W A;  3LMW A;  4PMH A;  1XG2 A;  2NTP A;  2UVE A;  1O8L A;  4Z03 A;  1PLU A;  4YZQ A;  1AIR A;  2O0V A;  4NK6 A;  2ODL A;  4OJ5 A;  3ZPP A;  4XM3 A;  4XQF A;  4XLE A;  2QX3 A;  3GQ7 A;  1O8D A;  2O17 A;  4XR6 A;  3B8Y A;  3VST A;  3VSU A;  1PXZ A;  2X3H A;  2NT9 A;  1EE6 A;  4AVZ A;  3VMW A;  5C1C A;  2NST A;  4XMY A;  2INU A;  2NSP A;  2NT6 A;  1O8J A;  3GQ8 A;  1JTA A;  3ZSC A;  1KCC A;  4XNF A;  1O8G A;  1HG8 A;  4OJ6 A;  1OFM A;  4XOT A;  2VJI A;  1O8H A;  2X6X A;  4EW9 A;  1KCD A;  2O1D A;  1BN8 A;  3VSV A;  3GQA A;  3WWG A;  2VJJ A;  4OZZ A;  4OJL A;  4YEL A;  5C1E A;  4I84 A;  2INV A;  4XL9 A;  4MXN A;  4W8T A;  1K5C A;  3VMV A;  1BHE A;  4XN0 A;  2O04 A;  4Z06 A;  3UW0 A;  2Z8G A;  4OJP A;  1OOC A;  4OJO A;  1DBO A;  1RWR A;  4XKW A;  4NK8 A;  2VBE A;  1RU4 A;  2X6Y A;  4C2L A;  2NTQ A;  4XOP A;  3B90 A;  1H80 A;  1O8M A;  4YZX A;  3EQO A;  4XON A;  1NHC A;  2PYH A;  3SUC A;  3B4N A;  2X85 A;  4Z05 A;  1O8F A;  2EWE A;  4URR A;  4HWV A;  1OGO X;  4W8Q A;  1PE9 A;  3GQ9 A;  4XLF A;  4YZA A;  1IA5 A;  4XLC A;  1RMG A; 
#chains in the Genus database with same CATH topology
 2XT4 A;  1QCX A;  4KH3 A;  2QY1 A;  3N6Z A;  4XKV A;  1IDK A;  4YZ0 A;  5JLV C;  1LM1 A;  1L1I A;  3JUR A;  3PET A;  3SQV A;  1DBG A;  1OGM X;  1TYV A;  2VBK A;  4OM9 A;  3T9G A;  2XC1 A;  5DNS A;  2NZM A;  3NB2 A;  3EQN A;  4YFO A;  1X0C A;  1WMR A;  5AMV A;  1VBL A;  1O8I A;  4MR0 A;  1O88 A;  2BSP A;  1OFD A;  1CZF A;  3NAW A;  4OZY A;  2YUH A;  4XOR A;  1LLW A;  4U4B A;  1K8F A;  3FY3 A;  3ML3 A;  1TYX A;  3LYC A;  1OFL A;  4W8S A;  1O8K A;  4XLH A;  4XLA A;  2IQ7 A;  4W8R A;  2PYG A;  3GRH A;  1QJV A;  4YEJ A;  2BM6 A;  2B0R A;  2UVF A;  3SZE A;  4JRA C;  2W7Z A;  1IB4 A;  4XN3 A;  1GQ8 A;  1KTW A;  2VBM A;  2NTB A;  1IDJ A;  2VFP A;  4U49 A;  1JRG A;  3PSS A;  2VFN A;  3KRG A;  2QXZ A;  4YDT A;  1O8E A;  2PEC A;  2XTX A;  1KCC A;  2O0W A;  2X6W A;  3LMW A;  4PMH A;  1XG2 A;  1QRC A;  2NTP A;  2UVE A;  3AK5 A;  1O8L A;  4Z03 A;  1PLU A;  4YZQ A;  1AIR A;  2O0V A;  4NK6 A;  2ODL A;  3BH7 B;  4OJ5 A;  3ZPP A;  1QA1 A;  2G0Y A;  3DU1 X;  4YC5 A;  1OFE A;  4XM3 A;  4XQF A;  4XLE A;  2BM4 A;  2QX3 A;  3GQ7 A;  1O8D A;  2O17 A;  3JX8 A;  4XR6 A;  3B8Y A;  1QRB A;  3VST A;  3VSU A;  1PXZ A;  2X3H A;  2BM7 A;  2NT9 A;  1EE6 A;  2VFO A;  4AVZ A;  3VMW A;  5C1C A;  3N90 A;  2O6W A;  3SY2 A;  2NST A;  4YEI A;  4XMY A;  1TSP A;  2INU A;  2NSP A;  2NT6 A;  1O8J A;  3RIQ A;  1TYU A;  3GQ8 A;  3BH6 B;  3LJY A;  2J8I A;  1JTA A;  2IOU G;  4YCQ A;  3ZSC A;  4XNF A;  1K4Z A;  1HG8 A;  1O8G A;  2V5I A;  1OFM A;  4OJ6 A;  2VJI A;  1O8H A;  4XOT A;  2J8K A;  2X6X A;  4EW9 A;  1KCD A;  1HF2 A;  1BN8 A;  2O1D A;  2QZA A;  3WWG A;  2VJJ A;  3GQA A;  4OZZ A;  4OJL A;  4YEL A;  5C1E A;  3VSV A;  4I84 A;  2INV A;  4XL9 A;  4V02 C;  4MXN A;  4W8T A;  1K5C A;  3VMV A;  1CLW A;  1BHE A;  4XN0 A;  2BX6 A;  2O04 A;  4Z06 A;  1QA3 A;  3UW0 A;  2Z8G A;  4OJP A;  1OOC A;  3TH0 A;  2BM5 A;  4OJO A;  1DBO A;  1RWR A;  4XKW A;  4NK8 A;  2VBE A;  1RU4 A;  2X6Y A;  4C2L A;  2NTQ A;  4XOP A;  1QA2 A;  1KQ5 A;  4OPW A;  3B90 A;  1H80 A;  1O8M A;  4YZX A;  3EQO A;  2XTW A;  1EA0 A;  4XON A;  2XT2 A;  3H09 A;  1WXR A;  2VFQ A;  1NHC A;  2PYH A;  2XTY A;  3SUC A;  1EZG A;  1DAB A;  1QQ1 A;  3B4N A;  2F3L A;  2X85 A;  4Z05 A;  1O8F A;  2EWE A;  4URR A;  4HWV A;  3P4G A;  1OGO X;  2QYU A;  3SYJ A;  4W8Q A;  1PE9 A;  1TYW A;  5JMC B;  3PSZ A;  1LLZ A;  3GQ9 A;  4XLF A;  4YZA A;  1IA5 A;  4XLC A;  2VFM A;  1RMG A; 
#chains in the Genus database with same CATH homology
 1QCX A;  2QY1 A;  4XKV A;  4YZ0 A;  1IDK A;  3JUR A;  1DBG A;  1OGM X;  2VBK A;  3T9G A;  2NZM A;  3EQN A;  1X0C A;  1WMR A;  5AMV A;  1VBL A;  1O8I A;  4MR0 A;  1O88 A;  2BSP A;  1CZF A;  4OZY A;  4XOR A;  4U4B A;  3FY3 A;  1OFL A;  4W8S A;  1O8K A;  4XLH A;  4XLA A;  2IQ7 A;  4W8R A;  2PYG A;  3GRH A;  1QJV A;  4YEJ A;  2UVF A;  1IB4 A;  4XN3 A;  1GQ8 A;  1KTW A;  2VBM A;  2NTB A;  1IDJ A;  4U49 A;  1JRG A;  3KRG A;  2QXZ A;  1O8E A;  2PEC A;  2O0W A;  2X6W A;  3LMW A;  4PMH A;  1XG2 A;  2NTP A;  2UVE A;  1O8L A;  4Z03 A;  1PLU A;  4YZQ A;  1AIR A;  2O0V A;  4NK6 A;  2ODL A;  4OJ5 A;  3ZPP A;  4XM3 A;  4XQF A;  4XLE A;  2QX3 A;  3GQ7 A;  1O8D A;  2O17 A;  4XR6 A;  3B8Y A;  3VST A;  3VSU A;  1PXZ A;  2X3H A;  2NT9 A;  1EE6 A;  4AVZ A;  3VMW A;  5C1C A;  2NST A;  4XMY A;  2INU A;  2NSP A;  2NT6 A;  1O8J A;  3GQ8 A;  1JTA A;  3ZSC A;  1KCC A;  4XNF A;  1O8G A;  1HG8 A;  4OJ6 A;  1OFM A;  4XOT A;  2VJI A;  1O8H A;  2X6X A;  4EW9 A;  1KCD A;  2O1D A;  1BN8 A;  3VSV A;  3GQA A;  3WWG A;  2VJJ A;  4OZZ A;  4OJL A;  4YEL A;  5C1E A;  4I84 A;  2INV A;  4XL9 A;  4MXN A;  4W8T A;  1K5C A;  3VMV A;  1BHE A;  4XN0 A;  2O04 A;  4Z06 A;  3UW0 A;  2Z8G A;  4OJP A;  1OOC A;  4OJO A;  1DBO A;  1RWR A;  4XKW A;  4NK8 A;  2VBE A;  1RU4 A;  2X6Y A;  4C2L A;  2NTQ A;  4XOP A;  3B90 A;  1H80 A;  1O8M A;  4YZX A;  3EQO A;  4XON A;  1NHC A;  2PYH A;  3SUC A;  3B4N A;  2X85 A;  4Z05 A;  1O8F A;  2EWE A;  4URR A;  4HWV A;  1OGO X;  4W8Q A;  1PE9 A;  3GQ9 A;  4XLF A;  4YZA A;  1IA5 A;  4XLC A;  1RMG A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...