3WWGA

Crystal structure of the n-glycan-deficient variant n448a of isopullulanase complexed with isopanose
Total Genus 184
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
184
sequence length
547
structure length
536
Chain Sequence
FMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYASAHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Aspergillus niger
publication title The side chain of a glycosylated asparagine residue is important for the stability of isopullulanase
pubmed doi rcsb
molecule keywords Isopullulanase
total genus 184
structure length 536
sequence length 547
chains with identical sequence B, C, D
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 3wwgA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3wwgA02
2X3HA 4XM3A 4URRA 3T9GA 1DBOA 1IDJA 4U49A 1IB4A 3VSUA 4XKWA 4XORA 4Z06A 4C2LA 5C1CA 4YEJA 2UVEA 1WMRA 1DBGA 2NSPA 1IA5A 4XKVA 2NTPA 3KRGA 1IDKA 4XOTA 3B8YA 4XONA 1O8DA 2QXZA 1H80A 3JURA 4OJOA 4OZYA 1PE9A 1O8MA 1BHEA 1RMGA 4EW9A 1OGOX 4W8QA 4OJ5A 3VMVA 2PYGA 3GQAA 4MXNA 1JRGA 1QCXA 1K5CA 4OJ6A 5C1EA 2PYHA 1CZFA 4W8SA 2Z8GA 2NT6A 2UVFA 4OJLA 2X6WA 1XG2A 3VSTA 3VSVA 1RWRA 2PECA 4XQFA 4AVZA 4YZAA 4NK8A 3WWGA 4Z05A 2EWEA 1O8FA 1EE6A 1GQ8A 1KCCA 1NHCA 1QJVA 2ODLA 1OFLA 4MR0A 1PLUA 2X6YA 1JTAA 3UW0A 4U4BA 1O88A 2NTQA 1O8GA 1O8IA 1O8JA 2X6XA 1BN8A 4I84A 3ZPPA 3FY3A 2O0VA 2INVA 1O8LA 4YELA 2VBKA 4YZ0A 2QX3A 1AIRA 4XL9A 2QY1A 1KCDA 3LMWA 4YZQA 3VMWA 2O04A 4XOPA 2O17A 3GRHA 2VBEA 1VBLA 3EQOA 2O0WA 1OFMA 2X85A 4XMYA 2VJIA 2INUA 4XR6A 4PMHA 3SUCA 1O8KA 4OJPA 4W8TA 2NT9A 1OGMX 4XLCA 4YZXA 1X0CA 1HG8A 2VJJA 4XN3A 1OOCA 1O8EA 4HWVA 3B4NA 5AMVA 1KTWA 1RU4A 2IQ7A 4OZZA 4XNFA 2BSPA 3ZSCA 2VBMA 4W8RA 4XLFA 4NK6A 3GQ7A 4XLHA 4XLEA 3GQ8A 2O1DA 1PXZA 2NZMA 3EQNA 1O8HA 3B90A 4XLAA 2NSTA 4Z03A 4XN0A 3GQ9A 2NTBA
chains in the Genus database with same CATH superfamily
2X3HA 4XM3A 4URRA 1QQ1A 3T9GA 4YEIA 1DBOA 1QRCA 1IDJA 4U49A 2XT2A 1IB4A 3VSUA 4XKWA 4XORA 4Z06A 3NAWA 4C2LA 2YUHA 3SZEA 5C1CA 4YEJA 2UVEA 3BH7B 1WMRA 1DBGA 2NSPA 5DNSA 4XKVA 1LLWA 1IA5A 2NTPA 3KRGA 1IDKA 4XOTA 1EZGA 1WXRA 1TYXA 2BM4A 1L1IA 3B8YA 2B0RA 4XONA 1O8DA 1LLZA 2QXZA 1H80A 3JURA 4OJOA 4OZYA 1PE9A 1O8MA 1BHEA 1RMGA 2J8IA 3JX8A 4EW9A 1OFEA 1OGOX 4W8QA 4OJ5A 3VMVA 2PYGA 3GQAA 4MXNA 4YFOA 3AK5A 1JRGA 1HF2A 1TSPA 3BH6B 4JRAC 1QCXA 4YC5A 1OFDA 1K5CA 3NB2A 4OJ6A 2PYHA 1CZFA 3LYCA 4W8SA 5C1EA 2Z8GA 1TYWA 2NT6A 2UVFA 4OJLA 2X6WA 1XG2A 2G0YA 3VSTA 3VSVA 1RWRA 2PECA 2VFPA 4XQFA 1QA2A 4AVZA 4YZAA 4NK8A 3SYJA 3WWGA 1KQ5A 4Z05A 2EWEA 1EA0A 1CLWA 3GQ9A 1O8FA 2J8KA 3RIQA 1EE6A 3PETA 1GQ8A 2XTXA 1KCCA 1NHCA 1QJVA 2ODLA 1OFLA 2VFQA 2XT4A 4MR0A 1PLUA 4V02C 2X6YA 1JTAA 3UW0A 4U4BA 1O88A 2NTQA 1O8GA 1O8IA 4YDTA 1O8JA 2X6XA 1BN8A 3N90A 4I84A 3ZPPA 3FY3A 2O0VA 2BM6A 2INVA 1O8LA 2XTYA 4YELA 2VBKA 2BX6A 4YZ0A 2QX3A 1AIRA 4XL9A 2QY1A 1KCDA 1DABA 3LMWA 4YZQA 2QYUA 1K8FA 3VMWA 2O04A 1QA1A 4XOPA 2F3LA 2O17A 3GRHA 2VBEA 1VBLA 3EQOA 2O0WA 3PSZA 1QA3A 1OFMA 2X85A 4XMYA 2VJIA 2INUA 4XR6A 4PMHA 3H09A 4YCQA 3SUCA 1O8KA 4OJPA 4OPWA 2NT9A 4W8TA 1OGMX 2V5IA 3P4GA 2XTWA 4XLCA 4YZXA 1X0CA 1HG8A 3LJYA 2VFMA 2VJJA 4XN3A 3ML3A 4OM9A 3TH0A 3SY2A 1OOCA 1TYUA 2VFOA 1O8EA 1QRBA 4HWVA 3B4NA 5AMVA 1KTWA 1RU4A 2IQ7A 4OZZA 4XNFA 2BSPA 4KH3A 3SQVA 5JLVC 3ZSCA 2VBMA 2QZAA 5JMCB 4W8RA 2XC1A 2IOUG 2W7ZA 4XLFA 3PSSA 4NK6A 3GQ7A 4XLHA 4XLEA 3GQ8A 3N6ZA 2BM5A 1PXZA 2NZMA 2O1DA 3EQNA 1O8HA 1K4ZA 3B90A 4XLAA 1LM1A 2NSTA 2BM7A 2VFNA 4Z03A 3DU1X 4XN0A 1TYVA 2O6WA 2NTBA
chains in the Genus database with same CATH topology
2X3HA 4XM3A 4URRA 3T9GA 1DBOA 1IDJA 4U49A 1IB4A 3VSUA 4XKWA 4XORA 4Z06A 4C2LA 5C1CA 4YEJA 2UVEA 1WMRA 1DBGA 2NSPA 1IA5A 4XKVA 2NTPA 3KRGA 1IDKA 4XOTA 3B8YA 4XONA 1O8DA 2QXZA 1H80A 3JURA 4OJOA 4OZYA 1PE9A 1O8MA 1BHEA 1RMGA 4EW9A 1OGOX 4W8QA 4OJ5A 3VMVA 2PYGA 3GQAA 4MXNA 1JRGA 1QCXA 1K5CA 4OJ6A 5C1EA 2PYHA 1CZFA 4W8SA 2Z8GA 2NT6A 2UVFA 4OJLA 2X6WA 1XG2A 3VSTA 3VSVA 1RWRA 2PECA 4XQFA 4AVZA 4YZAA 4NK8A 3WWGA 4Z05A 2EWEA 1O8FA 1EE6A 1GQ8A 1KCCA 1NHCA 1QJVA 2ODLA 1OFLA 4MR0A 1PLUA 2X6YA 1JTAA 3UW0A 4U4BA 1O88A 2NTQA 1O8GA 1O8IA 1O8JA 2X6XA 1BN8A 4I84A 3ZPPA 3FY3A 2O0VA 2INVA 1O8LA 4YELA 2VBKA 4YZ0A 2QX3A 1AIRA 4XL9A 2QY1A 1KCDA 3LMWA 4YZQA 3VMWA 2O04A 4XOPA 2O17A 3GRHA 2VBEA 1VBLA 3EQOA 2O0WA 1OFMA 2X85A 4XMYA 2VJIA 2INUA 4XR6A 4PMHA 3SUCA 1O8KA 4OJPA 4W8TA 2NT9A 1OGMX 4XLCA 4YZXA 1X0CA 1HG8A 2VJJA 4XN3A 1OOCA 1O8EA 4HWVA 3B4NA 5AMVA 1KTWA 1RU4A 2IQ7A 4OZZA 4XNFA 2BSPA 3ZSCA 2VBMA 4W8RA 4XLFA 4NK6A 3GQ7A 4XLHA 4XLEA 3GQ8A 2O1DA 1PXZA 2NZMA 3EQNA 1O8HA 3B90A 4XLAA 2NSTA 4Z03A 4XN0A 3GQ9A 2NTBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2X3H A;  4XM3 A;  4URR A;  3T9G A;  1DBO A;  1IDJ A;  4U49 A;  1IB4 A;  3VSU A;  4XKW A;  4XOR A;  4Z06 A;  4C2L A;  5C1C A;  4YEJ A;  2UVE A;  1WMR A;  1DBG A;  2NSP A;  1IA5 A;  4XKV A;  2NTP A;  3KRG A;  1IDK A;  4XOT A;  3B8Y A;  4XON A;  1O8D A;  2QXZ A;  1H80 A;  3JUR A;  4OJO A;  4OZY A;  1PE9 A;  1O8M A;  1BHE A;  1RMG A;  4EW9 A;  1OGO X;  4W8Q A;  4OJ5 A;  3VMV A;  2PYG A;  3GQA A;  4MXN A;  1JRG A;  1QCX A;  1K5C A;  4OJ6 A;  5C1E A;  2PYH A;  1CZF A;  4W8S A;  2Z8G A;  2NT6 A;  2UVF A;  4OJL A;  2X6W A;  1XG2 A;  3VST A;  3VSV A;  1RWR A;  2PEC A;  4XQF A;  4AVZ A;  4YZA A;  4NK8 A;  3WWG A;  4Z05 A;  2EWE A;  1O8F A;  1EE6 A;  1GQ8 A;  1KCC A;  1NHC A;  1QJV A;  2ODL A;  1OFL A;  4MR0 A;  1PLU A;  2X6Y A;  1JTA A;  3UW0 A;  4U4B A;  1O88 A;  2NTQ A;  1O8G A;  1O8I A;  1O8J A;  2X6X A;  1BN8 A;  4I84 A;  3ZPP A;  3FY3 A;  2O0V A;  2INV A;  1O8L A;  4YEL A;  2VBK A;  4YZ0 A;  2QX3 A;  1AIR A;  4XL9 A;  2QY1 A;  1KCD A;  3LMW A;  4YZQ A;  3VMW A;  2O04 A;  4XOP A;  2O17 A;  3GRH A;  2VBE A;  1VBL A;  3EQO A;  2O0W A;  1OFM A;  2X85 A;  4XMY A;  2VJI A;  2INU A;  4XR6 A;  4PMH A;  3SUC A;  1O8K A;  4OJP A;  4W8T A;  2NT9 A;  1OGM X;  4XLC A;  4YZX A;  1X0C A;  1HG8 A;  2VJJ A;  4XN3 A;  1OOC A;  1O8E A;  4HWV A;  3B4N A;  5AMV A;  1KTW A;  1RU4 A;  2IQ7 A;  4OZZ A;  4XNF A;  2BSP A;  3ZSC A;  2VBM A;  4W8R A;  4XLF A;  4NK6 A;  3GQ7 A;  4XLH A;  4XLE A;  3GQ8 A;  2O1D A;  1PXZ A;  2NZM A;  3EQN A;  1O8H A;  3B90 A;  4XLA A;  2NST A;  4Z03 A;  4XN0 A;  3GQ9 A;  2NTB A; 
#chains in the Genus database with same CATH topology
 2X3H A;  4XM3 A;  4URR A;  1QQ1 A;  3T9G A;  4YEI A;  1DBO A;  1QRC A;  1IDJ A;  4U49 A;  2XT2 A;  1IB4 A;  3VSU A;  4XKW A;  4XOR A;  4Z06 A;  3NAW A;  4C2L A;  2YUH A;  3SZE A;  5C1C A;  4YEJ A;  2UVE A;  3BH7 B;  1WMR A;  1DBG A;  2NSP A;  5DNS A;  4XKV A;  1LLW A;  1IA5 A;  2NTP A;  3KRG A;  1IDK A;  4XOT A;  1EZG A;  1WXR A;  1TYX A;  2BM4 A;  1L1I A;  3B8Y A;  2B0R A;  4XON A;  1O8D A;  1LLZ A;  2QXZ A;  1H80 A;  3JUR A;  4OJO A;  4OZY A;  1PE9 A;  1O8M A;  1BHE A;  1RMG A;  2J8I A;  3JX8 A;  4EW9 A;  1OFE A;  1OGO X;  4W8Q A;  4OJ5 A;  3VMV A;  2PYG A;  3GQA A;  4MXN A;  4YFO A;  3AK5 A;  1JRG A;  1HF2 A;  1TSP A;  3BH6 B;  4JRA C;  1QCX A;  4YC5 A;  1OFD A;  1K5C A;  3NB2 A;  4OJ6 A;  2PYH A;  1CZF A;  3LYC A;  4W8S A;  5C1E A;  2Z8G A;  1TYW A;  2NT6 A;  2UVF A;  4OJL A;  2X6W A;  1XG2 A;  2G0Y A;  3VST A;  3VSV A;  1RWR A;  2PEC A;  2VFP A;  4XQF A;  1QA2 A;  4AVZ A;  4YZA A;  4NK8 A;  3SYJ A;  3WWG A;  1KQ5 A;  4Z05 A;  2EWE A;  1EA0 A;  1CLW A;  3GQ9 A;  1O8F A;  2J8K A;  3RIQ A;  1EE6 A;  3PET A;  1GQ8 A;  2XTX A;  1KCC A;  1NHC A;  1QJV A;  2ODL A;  1OFL A;  2VFQ A;  2XT4 A;  4MR0 A;  1PLU A;  4V02 C;  2X6Y A;  1JTA A;  3UW0 A;  4U4B A;  1O88 A;  2NTQ A;  1O8G A;  1O8I A;  4YDT A;  1O8J A;  2X6X A;  1BN8 A;  3N90 A;  4I84 A;  3ZPP A;  3FY3 A;  2O0V A;  2BM6 A;  2INV A;  1O8L A;  2XTY A;  4YEL A;  2VBK A;  2BX6 A;  4YZ0 A;  2QX3 A;  1AIR A;  4XL9 A;  2QY1 A;  1KCD A;  1DAB A;  3LMW A;  4YZQ A;  2QYU A;  1K8F A;  3VMW A;  2O04 A;  1QA1 A;  4XOP A;  2F3L A;  2O17 A;  3GRH A;  2VBE A;  1VBL A;  3EQO A;  2O0W A;  3PSZ A;  1QA3 A;  1OFM A;  2X85 A;  4XMY A;  2VJI A;  2INU A;  4XR6 A;  4PMH A;  3H09 A;  4YCQ A;  3SUC A;  1O8K A;  4OJP A;  4OPW A;  2NT9 A;  4W8T A;  1OGM X;  2V5I A;  3P4G A;  2XTW A;  4XLC A;  4YZX A;  1X0C A;  1HG8 A;  3LJY A;  2VFM A;  2VJJ A;  4XN3 A;  3ML3 A;  4OM9 A;  3TH0 A;  3SY2 A;  1OOC A;  1TYU A;  2VFO A;  1O8E A;  1QRB A;  4HWV A;  3B4N A;  5AMV A;  1KTW A;  1RU4 A;  2IQ7 A;  4OZZ A;  4XNF A;  2BSP A;  4KH3 A;  3SQV A;  5JLV C;  3ZSC A;  2VBM A;  2QZA A;  5JMC B;  4W8R A;  2XC1 A;  2IOU G;  2W7Z A;  4XLF A;  3PSS A;  4NK6 A;  3GQ7 A;  4XLH A;  4XLE A;  3GQ8 A;  3N6Z A;  2BM5 A;  1PXZ A;  2NZM A;  2O1D A;  3EQN A;  1O8H A;  1K4Z A;  3B90 A;  4XLA A;  1LM1 A;  2NST A;  2BM7 A;  2VFN A;  4Z03 A;  3DU1 X;  4XN0 A;  1TYV A;  2O6W A;  2NTB A; 
#chains in the Genus database with same CATH homology
 2X3H A;  4XM3 A;  4URR A;  3T9G A;  1DBO A;  1IDJ A;  4U49 A;  1IB4 A;  3VSU A;  4XKW A;  4XOR A;  4Z06 A;  4C2L A;  5C1C A;  4YEJ A;  2UVE A;  1WMR A;  1DBG A;  2NSP A;  1IA5 A;  4XKV A;  2NTP A;  3KRG A;  1IDK A;  4XOT A;  3B8Y A;  4XON A;  1O8D A;  2QXZ A;  1H80 A;  3JUR A;  4OJO A;  4OZY A;  1PE9 A;  1O8M A;  1BHE A;  1RMG A;  4EW9 A;  1OGO X;  4W8Q A;  4OJ5 A;  3VMV A;  2PYG A;  3GQA A;  4MXN A;  1JRG A;  1QCX A;  1K5C A;  4OJ6 A;  5C1E A;  2PYH A;  1CZF A;  4W8S A;  2Z8G A;  2NT6 A;  2UVF A;  4OJL A;  2X6W A;  1XG2 A;  3VST A;  3VSV A;  1RWR A;  2PEC A;  4XQF A;  4AVZ A;  4YZA A;  4NK8 A;  3WWG A;  4Z05 A;  2EWE A;  1O8F A;  1EE6 A;  1GQ8 A;  1KCC A;  1NHC A;  1QJV A;  2ODL A;  1OFL A;  4MR0 A;  1PLU A;  2X6Y A;  1JTA A;  3UW0 A;  4U4B A;  1O88 A;  2NTQ A;  1O8G A;  1O8I A;  1O8J A;  2X6X A;  1BN8 A;  4I84 A;  3ZPP A;  3FY3 A;  2O0V A;  2INV A;  1O8L A;  4YEL A;  2VBK A;  4YZ0 A;  2QX3 A;  1AIR A;  4XL9 A;  2QY1 A;  1KCD A;  3LMW A;  4YZQ A;  3VMW A;  2O04 A;  4XOP A;  2O17 A;  3GRH A;  2VBE A;  1VBL A;  3EQO A;  2O0W A;  1OFM A;  2X85 A;  4XMY A;  2VJI A;  2INU A;  4XR6 A;  4PMH A;  3SUC A;  1O8K A;  4OJP A;  4W8T A;  2NT9 A;  1OGM X;  4XLC A;  4YZX A;  1X0C A;  1HG8 A;  2VJJ A;  4XN3 A;  1OOC A;  1O8E A;  4HWV A;  3B4N A;  5AMV A;  1KTW A;  1RU4 A;  2IQ7 A;  4OZZ A;  4XNF A;  2BSP A;  3ZSC A;  2VBM A;  4W8R A;  4XLF A;  4NK6 A;  3GQ7 A;  4XLH A;  4XLE A;  3GQ8 A;  2O1D A;  1PXZ A;  2NZM A;  3EQN A;  1O8H A;  3B90 A;  4XLA A;  2NST A;  4Z03 A;  4XN0 A;  3GQ9 A;  2NTB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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