1X0CA

Improved crystal structure of isopullulanase from aspergillus niger atcc 9642
Total Genus 181
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
181
sequence length
549
structure length
549
Chain Sequence
REFMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASSSLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSSANSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
pubmed doi rcsb
source organism Aspergillus niger
molecule tags Hydrolase
molecule keywords Isopullulanase
total genus 181
structure length 549
sequence length 549
chains with identical sequence B
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2005-03-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 1x0cA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 1x0cA02
1VBLA 4XOTA 4OZZA 4XLAA 4XKVA 2INVA 4YZAA 1WMRA 1OGOX 4Z05A 4XOPA 2O17A 1PE9A 4OJPA 1PXZA 4NK6A 4XMYA 4URRA 2ODLA 4OJ5A 1RMGA 1O88A 2VJJA 4I84A 3ZSCA 2NSPA 1DBOA 4XORA 1RWRA 4YELA 4W8TA 2PYGA 1O8FA 4HWVA 1HG8A 4XLHA 2NTPA 1AIRA 4Z03A 4YZ0A 1O8GA 2O04A 3ZPPA 1NHCA 2EWEA 2X6XA 4YZQA 4MR0A 3LMWA 2NT9A 4U49A 1JTAA 2NTQA 3GQ9A 2VBKA 3EQOA 3B90A 3FY3A 1IDKA 3JURA 4MXNA 3VMWA 1K5CA 1DBGA 4PMHA 1KTWA 4W8SA 4W8RA 1IDJA 3KRGA 1EE6A 4OJ6A 1O8JA 3GQ8A 1O8DA 3GQ7A 3UW0A 4XLCA 1KCCA 1JRGA 1BN8A 2QY1A 4XONA 4XLEA 1RU4A 2BSPA 2PECA 3GQAA 1O8MA 1O8KA 4XN3A 1O8EA 2O1DA 4XNFA 4YEJA 3WWGA 1IA5A 4C2LA 1OFMA 3EQNA 1O8LA 1XG2A 1GQ8A 1OGMX 4XKWA 2Z8GA 3B8YA 5C1EA 4XM3A 2INUA 2NZMA 3VSVA 1H80A 1KCDA 3VSUA 4AVZA 2QXZA 4NK8A 3SUCA 2O0WA 4U4BA 5AMVA 4EW9A 2QX3A 1O8IA 1PLUA 1BHEA 1QCXA 4OJOA 1QJVA 5C1CA 2VBMA 3VSTA 4XQFA 1OOCA 4Z06A 2VBEA 4W8QA 2O0VA 2NT6A 4OZYA 2NSTA 2X85A 1O8HA 4OJLA 1IB4A 3B4NA 4XL9A 3VMVA 1OFLA 2NTBA 3GRHA 2UVEA 1CZFA 2PYHA 2X6WA 2IQ7A 4XR6A 2UVFA 4YZXA 2X6YA 3T9GA 2X3HA 2VJIA 1X0CA 4XLFA 4XN0A
chains in the Genus database with same CATH superfamily
5JLVC 1VBLA 4XOTA 4OZZA 4XLAA 4KH3A 4XKVA 2INVA 3N90A 4YZAA 1WMRA 1OGOX 4Z05A 4XOPA 5JMCB 2BM6A 2O17A 1PE9A 3DU1X 1WXRA 4OJPA 4YEIA 1PXZA 4NK6A 4XMYA 2BM7A 2ODLA 4OJ5A 1RMGA 4URRA 1O88A 2VFQA 2VJJA 3PETA 4I84A 3ML3A 3ZSCA 2NSPA 1DBOA 2QYUA 4XORA 1RWRA 4YELA 2VFMA 2PYGA 1O8FA 2BX6A 1TSPA 2J8IA 4W8TA 4HWVA 1HG8A 3PSSA 4XLHA 4JRAC 1DABA 2NTPA 1AIRA 2XT2A 4Z03A 1TYUA 4YZ0A 2V5IA 1O8GA 2F3LA 1QRCA 2O04A 3ZPPA 1NHCA 2EWEA 2X6XA 1QQ1A 4YZQA 4MR0A 3H09A 3LMWA 2NT9A 4U49A 1JTAA 2NTQA 3GQ9A 2VBKA 1OFDA 3EQOA 3B90A 1KQ5A 1IDKA 3FY3A 3JURA 4MXNA 3SY2A 2XTYA 1OFEA 1DBGA 3VMWA 4PMHA 1K5CA 1KTWA 4V02C 2XC1A 4W8SA 4W8RA 1IDJA 3SYJA 3KRGA 1EE6A 5DNSA 4OJ6A 1O8JA 3GQ8A 1O8DA 3GQ7A 3UW0A 4XLCA 4YDTA 1JRGA 1KCCA 1BN8A 2QY1A 4XONA 4XLEA 1TYXA 1RU4A 2VFOA 3PSZA 3BH7B 1TYVA 2BSPA 2BM4A 2PECA 3GQAA 1O8MA 1O8KA 4XN3A 1O8EA 2O1DA 4XNFA 4YEJA 3WWGA 1IA5A 1LLZA 1OFMA 3EQNA 4C2LA 4YC5A 1O8LA 1XG2A 1EZGA 1GQ8A 3AK5A 1OGMX 4XKWA 2Z8GA 3SZEA 3B8YA 2IOUG 1HF2A 5C1EA 1QRBA 2XT4A 2VFNA 3P4GA 3BH6B 2G0YA 4XM3A 2INUA 2NZMA 2VFPA 1QA1A 3N6ZA 3VSVA 1QA3A 2XTWA 1H80A 3RIQA 1KCDA 3VSUA 1LLWA 4AVZA 2QXZA 3NB2A 4NK8A 3SUCA 2O6WA 4OPWA 2O0WA 4U4BA 4YFOA 1LM1A 5AMVA 3LJYA 4EW9A 1EA0A 2QX3A 1O8IA 1PLUA 1BHEA 1QCXA 4OJOA 3JX8A 1QJVA 5C1CA 2VBMA 4YCQA 3VSTA 4XQFA 1QA2A 1K8FA 1OOCA 4Z06A 2VBEA 3LYCA 4W8QA 1TYWA 2W7ZA 2O0VA 2NT6A 3TH0A 4OZYA 2NSTA 2X85A 1O8HA 4OJLA 3NAWA 1IB4A 3B4NA 2YUHA 4XL9A 3VMVA 1OFLA 2NTBA 3GRHA 2XTXA 2B0RA 1K4ZA 2QZAA 1CZFA 2PYHA 2UVEA 3SQVA 2X6WA 1CLWA 2IQ7A 2BM5A 4XR6A 2UVFA 4YZXA 2X6YA 3T9GA 2X3HA 2VJIA 4OM9A 2J8KA 1X0CA 1L1IA 4XLFA 4XN0A
chains in the Genus database with same CATH topology
1VBLA 4XOTA 4OZZA 4XLAA 4XKVA 2INVA 4YZAA 1WMRA 1OGOX 4Z05A 4XOPA 2O17A 1PE9A 4OJPA 1PXZA 4NK6A 4XMYA 4URRA 2ODLA 4OJ5A 1RMGA 1O88A 2VJJA 4I84A 3ZSCA 2NSPA 1DBOA 4XORA 1RWRA 4YELA 4W8TA 2PYGA 1O8FA 4HWVA 1HG8A 4XLHA 2NTPA 1AIRA 4Z03A 4YZ0A 1O8GA 2O04A 3ZPPA 1NHCA 2EWEA 2X6XA 4YZQA 4MR0A 3LMWA 2NT9A 4U49A 1JTAA 2NTQA 3GQ9A 2VBKA 3EQOA 3B90A 3FY3A 1IDKA 3JURA 4MXNA 3VMWA 1K5CA 1DBGA 4PMHA 1KTWA 4W8SA 4W8RA 1IDJA 3KRGA 1EE6A 4OJ6A 1O8JA 3GQ8A 1O8DA 3GQ7A 3UW0A 4XLCA 1KCCA 1JRGA 1BN8A 2QY1A 4XONA 4XLEA 1RU4A 2BSPA 2PECA 3GQAA 1O8MA 1O8KA 4XN3A 1O8EA 2O1DA 4XNFA 4YEJA 3WWGA 1IA5A 4C2LA 1OFMA 3EQNA 1O8LA 1XG2A 1GQ8A 1OGMX 4XKWA 2Z8GA 3B8YA 5C1EA 4XM3A 2INUA 2NZMA 3VSVA 1H80A 1KCDA 3VSUA 4AVZA 2QXZA 4NK8A 3SUCA 2O0WA 4U4BA 5AMVA 4EW9A 2QX3A 1O8IA 1PLUA 1BHEA 1QCXA 4OJOA 1QJVA 5C1CA 2VBMA 3VSTA 4XQFA 1OOCA 4Z06A 2VBEA 4W8QA 2O0VA 2NT6A 4OZYA 2NSTA 2X85A 1O8HA 4OJLA 1IB4A 3B4NA 4XL9A 3VMVA 1OFLA 2NTBA 3GRHA 2UVEA 1CZFA 2PYHA 2X6WA 2IQ7A 4XR6A 2UVFA 4YZXA 2X6YA 3T9GA 2X3HA 2VJIA 1X0CA 4XLFA 4XN0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1VBL A;  4XOT A;  4OZZ A;  4XLA A;  4XKV A;  2INV A;  4YZA A;  1WMR A;  1OGO X;  4Z05 A;  4XOP A;  2O17 A;  1PE9 A;  4OJP A;  1PXZ A;  4NK6 A;  4XMY A;  4URR A;  2ODL A;  4OJ5 A;  1RMG A;  1O88 A;  2VJJ A;  4I84 A;  3ZSC A;  2NSP A;  1DBO A;  4XOR A;  1RWR A;  4YEL A;  4W8T A;  2PYG A;  1O8F A;  4HWV A;  1HG8 A;  4XLH A;  2NTP A;  1AIR A;  4Z03 A;  4YZ0 A;  1O8G A;  2O04 A;  3ZPP A;  1NHC A;  2EWE A;  2X6X A;  4YZQ A;  4MR0 A;  3LMW A;  2NT9 A;  4U49 A;  1JTA A;  2NTQ A;  3GQ9 A;  2VBK A;  3EQO A;  3B90 A;  3FY3 A;  1IDK A;  3JUR A;  4MXN A;  3VMW A;  1K5C A;  1DBG A;  4PMH A;  1KTW A;  4W8S A;  4W8R A;  1IDJ A;  3KRG A;  1EE6 A;  4OJ6 A;  1O8J A;  3GQ8 A;  1O8D A;  3GQ7 A;  3UW0 A;  4XLC A;  1KCC A;  1JRG A;  1BN8 A;  2QY1 A;  4XON A;  4XLE A;  1RU4 A;  2BSP A;  2PEC A;  3GQA A;  1O8M A;  1O8K A;  4XN3 A;  1O8E A;  2O1D A;  4XNF A;  4YEJ A;  3WWG A;  1IA5 A;  4C2L A;  1OFM A;  3EQN A;  1O8L A;  1XG2 A;  1GQ8 A;  1OGM X;  4XKW A;  2Z8G A;  3B8Y A;  5C1E A;  4XM3 A;  2INU A;  2NZM A;  3VSV A;  1H80 A;  1KCD A;  3VSU A;  4AVZ A;  2QXZ A;  4NK8 A;  3SUC A;  2O0W A;  4U4B A;  5AMV A;  4EW9 A;  2QX3 A;  1O8I A;  1PLU A;  1BHE A;  1QCX A;  4OJO A;  1QJV A;  5C1C A;  2VBM A;  3VST A;  4XQF A;  1OOC A;  4Z06 A;  2VBE A;  4W8Q A;  2O0V A;  2NT6 A;  4OZY A;  2NST A;  2X85 A;  1O8H A;  4OJL A;  1IB4 A;  3B4N A;  4XL9 A;  3VMV A;  1OFL A;  2NTB A;  3GRH A;  2UVE A;  1CZF A;  2PYH A;  2X6W A;  2IQ7 A;  4XR6 A;  2UVF A;  4YZX A;  2X6Y A;  3T9G A;  2X3H A;  2VJI A;  1X0C A;  4XLF A;  4XN0 A; 
#chains in the Genus database with same CATH topology
 5JLV C;  1VBL A;  4XOT A;  4OZZ A;  4XLA A;  4KH3 A;  4XKV A;  2INV A;  3N90 A;  4YZA A;  1WMR A;  1OGO X;  4Z05 A;  4XOP A;  5JMC B;  2BM6 A;  2O17 A;  1PE9 A;  3DU1 X;  1WXR A;  4OJP A;  4YEI A;  1PXZ A;  4NK6 A;  4XMY A;  2BM7 A;  2ODL A;  4OJ5 A;  1RMG A;  4URR A;  1O88 A;  2VFQ A;  2VJJ A;  3PET A;  4I84 A;  3ML3 A;  3ZSC A;  2NSP A;  1DBO A;  2QYU A;  4XOR A;  1RWR A;  4YEL A;  2VFM A;  2PYG A;  1O8F A;  2BX6 A;  1TSP A;  2J8I A;  4W8T A;  4HWV A;  1HG8 A;  3PSS A;  4XLH A;  4JRA C;  1DAB A;  2NTP A;  1AIR A;  2XT2 A;  4Z03 A;  1TYU A;  4YZ0 A;  2V5I A;  1O8G A;  2F3L A;  1QRC A;  2O04 A;  3ZPP A;  1NHC A;  2EWE A;  2X6X A;  1QQ1 A;  4YZQ A;  4MR0 A;  3H09 A;  3LMW A;  2NT9 A;  4U49 A;  1JTA A;  2NTQ A;  3GQ9 A;  2VBK A;  1OFD A;  3EQO A;  3B90 A;  1KQ5 A;  1IDK A;  3FY3 A;  3JUR A;  4MXN A;  3SY2 A;  2XTY A;  1OFE A;  1DBG A;  3VMW A;  4PMH A;  1K5C A;  1KTW A;  4V02 C;  2XC1 A;  4W8S A;  4W8R A;  1IDJ A;  3SYJ A;  3KRG A;  1EE6 A;  5DNS A;  4OJ6 A;  1O8J A;  3GQ8 A;  1O8D A;  3GQ7 A;  3UW0 A;  4XLC A;  4YDT A;  1JRG A;  1KCC A;  1BN8 A;  2QY1 A;  4XON A;  4XLE A;  1TYX A;  1RU4 A;  2VFO A;  3PSZ A;  3BH7 B;  1TYV A;  2BSP A;  2BM4 A;  2PEC A;  3GQA A;  1O8M A;  1O8K A;  4XN3 A;  1O8E A;  2O1D A;  4XNF A;  4YEJ A;  3WWG A;  1IA5 A;  1LLZ A;  1OFM A;  3EQN A;  4C2L A;  4YC5 A;  1O8L A;  1XG2 A;  1EZG A;  1GQ8 A;  3AK5 A;  1OGM X;  4XKW A;  2Z8G A;  3SZE A;  3B8Y A;  2IOU G;  1HF2 A;  5C1E A;  1QRB A;  2XT4 A;  2VFN A;  3P4G A;  3BH6 B;  2G0Y A;  4XM3 A;  2INU A;  2NZM A;  2VFP A;  1QA1 A;  3N6Z A;  3VSV A;  1QA3 A;  2XTW A;  1H80 A;  3RIQ A;  1KCD A;  3VSU A;  1LLW A;  4AVZ A;  2QXZ A;  3NB2 A;  4NK8 A;  3SUC A;  2O6W A;  4OPW A;  2O0W A;  4U4B A;  4YFO A;  1LM1 A;  5AMV A;  3LJY A;  4EW9 A;  1EA0 A;  2QX3 A;  1O8I A;  1PLU A;  1BHE A;  1QCX A;  4OJO A;  3JX8 A;  1QJV A;  5C1C A;  2VBM A;  4YCQ A;  3VST A;  4XQF A;  1QA2 A;  1K8F A;  1OOC A;  4Z06 A;  2VBE A;  3LYC A;  4W8Q A;  1TYW A;  2W7Z A;  2O0V A;  2NT6 A;  3TH0 A;  4OZY A;  2NST A;  2X85 A;  1O8H A;  4OJL A;  3NAW A;  1IB4 A;  3B4N A;  2YUH A;  4XL9 A;  3VMV A;  1OFL A;  2NTB A;  3GRH A;  2XTX A;  2B0R A;  1K4Z A;  2QZA A;  1CZF A;  2PYH A;  2UVE A;  3SQV A;  2X6W A;  1CLW A;  2IQ7 A;  2BM5 A;  4XR6 A;  2UVF A;  4YZX A;  2X6Y A;  3T9G A;  2X3H A;  2VJI A;  4OM9 A;  2J8K A;  1X0C A;  1L1I A;  4XLF A;  4XN0 A; 
#chains in the Genus database with same CATH homology
 1VBL A;  4XOT A;  4OZZ A;  4XLA A;  4XKV A;  2INV A;  4YZA A;  1WMR A;  1OGO X;  4Z05 A;  4XOP A;  2O17 A;  1PE9 A;  4OJP A;  1PXZ A;  4NK6 A;  4XMY A;  4URR A;  2ODL A;  4OJ5 A;  1RMG A;  1O88 A;  2VJJ A;  4I84 A;  3ZSC A;  2NSP A;  1DBO A;  4XOR A;  1RWR A;  4YEL A;  4W8T A;  2PYG A;  1O8F A;  4HWV A;  1HG8 A;  4XLH A;  2NTP A;  1AIR A;  4Z03 A;  4YZ0 A;  1O8G A;  2O04 A;  3ZPP A;  1NHC A;  2EWE A;  2X6X A;  4YZQ A;  4MR0 A;  3LMW A;  2NT9 A;  4U49 A;  1JTA A;  2NTQ A;  3GQ9 A;  2VBK A;  3EQO A;  3B90 A;  3FY3 A;  1IDK A;  3JUR A;  4MXN A;  3VMW A;  1K5C A;  1DBG A;  4PMH A;  1KTW A;  4W8S A;  4W8R A;  1IDJ A;  3KRG A;  1EE6 A;  4OJ6 A;  1O8J A;  3GQ8 A;  1O8D A;  3GQ7 A;  3UW0 A;  4XLC A;  1KCC A;  1JRG A;  1BN8 A;  2QY1 A;  4XON A;  4XLE A;  1RU4 A;  2BSP A;  2PEC A;  3GQA A;  1O8M A;  1O8K A;  4XN3 A;  1O8E A;  2O1D A;  4XNF A;  4YEJ A;  3WWG A;  1IA5 A;  4C2L A;  1OFM A;  3EQN A;  1O8L A;  1XG2 A;  1GQ8 A;  1OGM X;  4XKW A;  2Z8G A;  3B8Y A;  5C1E A;  4XM3 A;  2INU A;  2NZM A;  3VSV A;  1H80 A;  1KCD A;  3VSU A;  4AVZ A;  2QXZ A;  4NK8 A;  3SUC A;  2O0W A;  4U4B A;  5AMV A;  4EW9 A;  2QX3 A;  1O8I A;  1PLU A;  1BHE A;  1QCX A;  4OJO A;  1QJV A;  5C1C A;  2VBM A;  3VST A;  4XQF A;  1OOC A;  4Z06 A;  2VBE A;  4W8Q A;  2O0V A;  2NT6 A;  4OZY A;  2NST A;  2X85 A;  1O8H A;  4OJL A;  1IB4 A;  3B4N A;  4XL9 A;  3VMV A;  1OFL A;  2NTB A;  3GRH A;  2UVE A;  1CZF A;  2PYH A;  2X6W A;  2IQ7 A;  4XR6 A;  2UVF A;  4YZX A;  2X6Y A;  3T9G A;  2X3H A;  2VJI A;  1X0C A;  4XLF A;  4XN0 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...