2XC1A

Full-length tailspike protein mutant y108w of bacteriophage p22
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
660
structure length
660
Chain Sequence
b'VVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQITQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDANGSQVDYIANVLKWDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDRDYNFYGGETVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGAGSGSAYTQLTAISGSTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords BIFUNCTIONAL TAIL PROTEIN
publication title Bacteriophage P22 Tailspike: Structure of the Complete Protein and Function of the Interdomain Linker
pubmed doi rcsb
source organism Enterobacteria phage p22
molecule tags Hydrolase
total genus 218
structure length 660
sequence length 660
chains with identical sequence B, C
ec nomenclature ec 3.2.1.-:
pdb deposition date 2010-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF09251 PhageP22-tail Salmonella phage P22 tail-spike
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.20 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 2xc1A02
2.170.14.10 Mainly Beta Beta Complex Tailspike Protein; Chain Phage P22 tailspike-like, N-terminal domain 2xc1A01
1TYUA 2XC1A 1LKTA 3H09A 1DABA 1TYWA 3AK5A 1QQ1A 2VFOA 1TYVA 1QRCA 2VFNA 2VKYB 3RIQA 2VNLA 1QRBA 2VFPA 1QA1A 4KH3A 1CLWA 2VFMA 1QA3A 3SYJA 4OM9A 1WXRA 1QA2A 2VFQA 2IOUG 1TSPA 2V5IA 3TH0A 3ML3A 1TYXA 3SZEA
chains in the Genus database with same CATH superfamily
2XC1A 2QZAA 4XMYA 4XONA 2QX3A 2W7ZA 5DNSA 3LJYA 1O88A 4YZQA 2IQ7A 3BH6B 4YDTA 4Z06A 3SUCA 2O1DA 2QY1A 4YEIA 1X0CA 1O8FA 3SY2A 1K5CA 1KQ5A 2BM7A 1TYVA 2VFNA 4XKVA 3FY3A 3JX8A 2VJJA 2O6WA 3B8YA 1BN8A 3SQVA 3TH0A 4YC5A 3ZSCA 4NK8A 4URRA 3UW0A 2VNLA 2XTYA 4OJ5A 2XTXA 1CLWA 4W8QA 3P4GA 2NSPA 4W8SA 2BM5A 4XM3A 3NB2A 4YEJA 1OOCA 4W8TA 3VMVA 2O17A 3LYCA 2NT6A 4XN0A 1OGMX 4YZXA 3WWGA 1OFLA 1QA2A 3GQ7A 4YCQA 4XOPA 1JRGA 1O8JA 2EWEA 2BM4A 2BX6A 1PE9A 4W8RA 4YFOA 3KRGA 4NK6A 2X6XA 3PSZA 2BSPA 2QXZA 2VBMA 4OZYA 3B90A 3VSTA 1O8HA 1JTAA 4XL9A 3VMWA 1OGOX 4V02C 4XLFA 2VFOA 3PETA 2VBKA 2INVA 4OZZA 4XLCA 4XQFA 2J8IA 4I84A 1GQ8A 1K4ZA 4XLEA 2XTWA 2NSTA 1KTWA 4XLAA 1EZGA 1EE6A 2VFPA 4XORA 5AMVA 2J8KA 4Z05A 1OFEA 3GQAA 1QA3A 5JMCB 3SYJA 3LMWA 2NTPA 2O04A 4XKWA 4EW9A 1WXRA 1XG2A 2NT9A 2YUHA 3DU1X 3GQ9A 4U49A 1TSPA 1RWRA 3ZPPA 1IDKA 1O8KA 1TYXA 3ML3A 2Z8GA 4OJOA 3PSSA 3SZEA 1TYUA 3JURA 4MXNA 1PXZA 2NTQA 1DBOA 4YZAA 1QJVA 5C1CA 1DABA 1O8EA 1TYWA 3N6ZA 4U4BA 4HWVA 4XLHA 1OFDA 3EQOA 2NTBA 1O8MA 1QRCA 2X85A 3B4NA 2VJIA 3BH7B 2VBEA 3N90A 5JLVC 2VKYB 1IDJA 4PMHA 1IA5A 3RIQA 1QRBA 4KH3A 4OJPA 1O8IA 4C2LA 2PECA 4OPWA 3T9GA 2BM6A 1HG8A 1PLUA 2X3HA 4XNFA 4AVZA 2V5IA 2G0YA 3GQ8A 4YELA 4JRAC 1LKTA 4XN3A 4XOTA 1QCXA 1BHEA 1KCDA 3H09A 1CZFA 1NHCA 3AK5A 1QQ1A 4OJ6A 2B0RA 2INUA 1O8GA 1LLWA 3NAWA 1L1IA 1O8DA 1LLZA 2XT2A 1K8FA 4OJLA 1RMGA 2UVFA 2X6YA 2XT4A 4MR0A 1RU4A 2X6WA 1EA0A 2O0WA 3VSVA 3GRHA 1QA1A 2PYHA 4XR6A 2QYUA 2VFMA 1DBGA 1IB4A 5C1EA 2F3LA 1HF2A 1KCCA 1H80A 1VBLA 4Z03A 1AIRA 1OFMA 2O0VA 1LM1A 4OM9A 2VFQA 3EQNA 2PYGA 2IOUG 4YZ0A 2NZMA 1WMRA 3VSUA 1O8LA 2ODLA 2UVEA
chains in the Genus database with same CATH topology
1TYUA 2XC1A 4JRAC 1LKTA 2BM4A 2BX6A 2W7ZA 3H09A 1DABA 3LJYA 1TYWA 3N6ZA 3BH6B 3AK5A 1QQ1A 4OJ6A 2B0RA 4V02C 2VFOA 3PETA 1KQ5A 2BM7A 1TYVA 2J8IA 1QRCA 5JLVC 2VFNA 3BH7B 1K4ZA 3N90A 1K8FA 4OJLA 3JX8A 2VKYB 4OJOA 3RIQA 2VNLA 1QRBA 2VFPA 1QA1A 4KH3A 4OJ5A 4OJPA 1CLWA 2VFMA 3P4GA 4OPWA 1QA3A 2BM6A 2BM5A 2F3LA 1HF2A 3SYJA 5JMCB 4OM9A 2YUHA 1QA2A 2VFQA 3LYCA 1WXRA 2IOUG 1TSPA 2G0YA 2V5IA 3TH0A 3ML3A 1TYXA 3SZEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TYU A;  2XC1 A;  1LKT A;  3H09 A;  1DAB A;  1TYW A;  3AK5 A;  1QQ1 A;  2VFO A;  1TYV A;  1QRC A;  2VFN A;  2VKY B;  3RIQ A;  2VNL A;  1QRB A;  2VFP A;  1QA1 A;  4KH3 A;  1CLW A;  2VFM A;  1QA3 A;  3SYJ A;  4OM9 A;  1WXR A;  1QA2 A;  2VFQ A;  2IOU G;  1TSP A;  2V5I A;  3TH0 A;  3ML3 A;  1TYX A;  3SZE A; 
#chains in the Genus database with same CATH topology
 2XC1 A;  2QZA A;  4XMY A;  4XON A;  2QX3 A;  2W7Z A;  5DNS A;  3LJY A;  1O88 A;  4YZQ A;  2IQ7 A;  3BH6 B;  4YDT A;  4Z06 A;  3SUC A;  2O1D A;  2QY1 A;  4YEI A;  1X0C A;  1O8F A;  3SY2 A;  1K5C A;  1KQ5 A;  2BM7 A;  1TYV A;  2VFN A;  4XKV A;  3FY3 A;  3JX8 A;  2VJJ A;  2O6W A;  3B8Y A;  1BN8 A;  3SQV A;  3TH0 A;  4YC5 A;  3ZSC A;  4NK8 A;  4URR A;  3UW0 A;  2VNL A;  2XTY A;  4OJ5 A;  2XTX A;  1CLW A;  4W8Q A;  3P4G A;  2NSP A;  4W8S A;  2BM5 A;  4XM3 A;  3NB2 A;  4YEJ A;  1OOC A;  4W8T A;  3VMV A;  2O17 A;  3LYC A;  2NT6 A;  4XN0 A;  1OGM X;  4YZX A;  3WWG A;  1OFL A;  1QA2 A;  3GQ7 A;  4YCQ A;  4XOP A;  1JRG A;  1O8J A;  2EWE A;  2BM4 A;  2BX6 A;  1PE9 A;  4W8R A;  4YFO A;  3KRG A;  4NK6 A;  2X6X A;  3PSZ A;  2BSP A;  2QXZ A;  2VBM A;  4OZY A;  3B90 A;  3VST A;  1O8H A;  1JTA A;  4XL9 A;  3VMW A;  1OGO X;  4V02 C;  4XLF A;  2VFO A;  3PET A;  2VBK A;  2INV A;  4OZZ A;  4XLC A;  4XQF A;  2J8I A;  4I84 A;  1GQ8 A;  1K4Z A;  4XLE A;  2XTW A;  2NST A;  1KTW A;  4XLA A;  1EZG A;  1EE6 A;  2VFP A;  4XOR A;  5AMV A;  2J8K A;  4Z05 A;  1OFE A;  3GQA A;  1QA3 A;  5JMC B;  3SYJ A;  3LMW A;  2NTP A;  2O04 A;  4XKW A;  4EW9 A;  1WXR A;  1XG2 A;  2NT9 A;  2YUH A;  3DU1 X;  3GQ9 A;  4U49 A;  1TSP A;  1RWR A;  3ZPP A;  1IDK A;  1O8K A;  1TYX A;  3ML3 A;  2Z8G A;  4OJO A;  3PSS A;  3SZE A;  1TYU A;  3JUR A;  4MXN A;  1PXZ A;  2NTQ A;  1DBO A;  4YZA A;  1QJV A;  5C1C A;  1DAB A;  1O8E A;  1TYW A;  3N6Z A;  4U4B A;  4HWV A;  4XLH A;  1OFD A;  3EQO A;  2NTB A;  1O8M A;  1QRC A;  2X85 A;  3B4N A;  2VJI A;  3BH7 B;  2VBE A;  3N90 A;  5JLV C;  2VKY B;  1IDJ A;  4PMH A;  1IA5 A;  3RIQ A;  1QRB A;  4KH3 A;  4OJP A;  1O8I A;  4C2L A;  2PEC A;  4OPW A;  3T9G A;  2BM6 A;  1HG8 A;  1PLU A;  2X3H A;  4XNF A;  4AVZ A;  2V5I A;  2G0Y A;  3GQ8 A;  4YEL A;  4JRA C;  1LKT A;  4XN3 A;  4XOT A;  1QCX A;  1BHE A;  1KCD A;  3H09 A;  1CZF A;  1NHC A;  3AK5 A;  1QQ1 A;  4OJ6 A;  2B0R A;  2INU A;  1O8G A;  1LLW A;  3NAW A;  1L1I A;  1O8D A;  1LLZ A;  2XT2 A;  1K8F A;  4OJL A;  1RMG A;  2UVF A;  2X6Y A;  2XT4 A;  4MR0 A;  1RU4 A;  2X6W A;  1EA0 A;  2O0W A;  3VSV A;  3GRH A;  1QA1 A;  2PYH A;  4XR6 A;  2QYU A;  2VFM A;  1DBG A;  1IB4 A;  5C1E A;  2F3L A;  1HF2 A;  1KCC A;  1H80 A;  1VBL A;  4Z03 A;  1AIR A;  1OFM A;  2O0V A;  1LM1 A;  4OM9 A;  2VFQ A;  3EQN A;  2PYG A;  2IOU G;  4YZ0 A;  2NZM A;  1WMR A;  3VSU A;  1O8L A;  2ODL A;  2UVE A; 
#chains in the Genus database with same CATH homology
 1TYU A;  2XC1 A;  4JRA C;  1LKT A;  2BM4 A;  2BX6 A;  2W7Z A;  3H09 A;  1DAB A;  3LJY A;  1TYW A;  3N6Z A;  3BH6 B;  3AK5 A;  1QQ1 A;  4OJ6 A;  2B0R A;  4V02 C;  2VFO A;  3PET A;  1KQ5 A;  2BM7 A;  1TYV A;  2J8I A;  1QRC A;  5JLV C;  2VFN A;  3BH7 B;  1K4Z A;  3N90 A;  1K8F A;  4OJL A;  3JX8 A;  2VKY B;  4OJO A;  3RIQ A;  2VNL A;  1QRB A;  2VFP A;  1QA1 A;  4KH3 A;  4OJ5 A;  4OJP A;  1CLW A;  2VFM A;  3P4G A;  4OPW A;  1QA3 A;  2BM6 A;  2BM5 A;  2F3L A;  1HF2 A;  3SYJ A;  5JMC B;  4OM9 A;  2YUH A;  1QA2 A;  2VFQ A;  3LYC A;  1WXR A;  2IOU G;  1TSP A;  2G0Y A;  2V5I A;  3TH0 A;  3ML3 A;  1TYX A;  3SZE A; 
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