2XC1A

Full-length tailspike protein mutant y108w of bacteriophage p22
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
660
structure length
660
Chain Sequence
VVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQITQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDANGSQVDYIANVLKWDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDRDYNFYGGETVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGAGSGSAYTQLTAISGSTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords BIFUNCTIONAL TAIL PROTEIN
publication title Bacteriophage P22 Tailspike: Structure of the Complete Protein and Function of the Interdomain Linker
pubmed doi rcsb
source organism Enterobacteria phage p22
molecule tags Hydrolase
total genus 218
structure length 660
sequence length 660
chains with identical sequence B, C
ec nomenclature ec 3.2.1.-:
pdb deposition date 2010-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF09251 PhageP22-tail Salmonella phage P22 tail-spike
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.20 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 2xc1A02
2.170.14.10 Mainly Beta Beta Complex Tailspike Protein; Chain Phage P22 tailspike-like, N-terminal domain 2xc1A01
1QA2A 1WXRA 1QQ1A 2XC1A 1QA3A 1QRBA 3H09A 2VFOA 1CLWA 1TYUA 2IOUG 1TYVA 2VFMA 3RIQA 3TH0A 1QA1A 3ML3A 4OM9A 2VFQA 2VNLA 1LKTA 3AK5A 1TYXA 1TYWA 3SZEA 1DABA 1TSPA 2VFNA 2VFPA 4KH3A 1QRCA 3SYJA 2VKYB 2V5IA
chains in the Genus database with same CATH superfamily
2XC1A 2INUA 2BM7A 4OJPA 4PMHA 3VSUA 1QRBA 2YUHA 2VFOA 1TYUA 3B90A 1XG2A 2XT2A 3EQNA 1OFLA 1LLZA 4XR6A 1O8JA 1CZFA 1OFEA 2X6WA 4MR0A 4OJ6A 4XLHA 1HF2A 2J8KA 1BHEA 4U4BA 2VBMA 2VBKA 3N6ZA 4YELA 3JURA 4YEJA 1O8DA 2O0WA 3GRHA 3NAWA 2G0YA 3SZEA 4C2LA 4XQFA 1O88A 1JRGA 2NZMA 3AK5A 4W8RA 1OFDA 5JLVC 1O8MA 4XONA 2QYUA 1O8FA 3BH7B 4OJOA 2VJJA 1IDKA 1OGOX 1O8LA 4XL9A 4XOTA 4XORA 3VSTA 3ZPPA 2O17A 4XOPA 3LJYA 2V5IA 1QQ1A 2F3LA 1LM1A 4YZ0A 1IA5A 5C1CA 3GQ7A 2J8IA 2IOUG 2INVA 2NSPA 1RMGA 1X0CA 2BM6A 3TH0A 1O8IA 4I84A 2EWEA 1RWRA 2XTYA 4XLEA 4XN0A 3ML3A 4OM9A 3N90A 2O04A 2VFQA 4XNFA 3SQVA 1LKTA 3NB2A 4XN3A 1EE6A 2NT9A 1DABA 2Z8GA 3GQAA 3PSZA 4W8SA 2VJIA 1DBGA 4YZQA 2O6WA 2UVFA 3PSSA 1OFMA 2QXZA 3SYJA 2NTQA 4YEIA 4OJLA 2BM5A 4Z03A 2PYGA 1K5CA 3B4NA 2QY1A 1O8KA 4V02C 2QX3A 1QA3A 2ODLA 1WXRA 1EA0A 1O8EA 1RU4A 3SUCA 2X85A 3GQ8A 3H09A 4AVZA 3EQOA 2XTXA 1KCDA 2O1DA 3B8YA 1L1IA 1JTAA 2VFMA 4OZYA 4U49A 4OZZA 3RIQA 4XKWA 4YZAA 1GQ8A 1QA1A 2BM4A 1OOCA 1H80A 1PE9A 1DBOA 1VBLA 2BX6A 2O0VA 2X3HA 3FY3A 4OJ5A 4W8QA 3T9GA 3UW0A 2NT6A 3SY2A 1BN8A 1OGMX 1TYWA 2PYHA 4XLCA 2X6XA 3BH6B 1HG8A 2VFNA 3DU1X 4XKVA 1KCCA 3LMWA 4JRAC 2VKYB 4XMYA 1K8FA 2XT4A 1QA2A 1QJVA 2PECA 4YCQA 4XLAA 5JMCB 1CLWA 1O8GA 2IQ7A 4MXNA 1IB4A 1TYVA 2XTWA 4URRA 4W8TA 1AIRA 1IDJA 2B0RA 2NSTA 3PETA 4XM3A 1O8HA 4YZXA 3VMVA 2NTPA 2BSPA 4Z06A 1WMRA 3ZSCA 4YC5A 2VNLA 2W7ZA 4YFOA 5C1EA 1NHCA 3WWGA 2VBEA 2QZAA 1EZGA 3JX8A 4Z05A 5DNSA 2NTBA 1TYXA 5AMVA 4NK8A 3VMWA 2UVEA 3LYCA 1KQ5A 1TSPA 4NK6A 1LLWA 4OPWA 2VFPA 4XLFA 3VSVA 2X6YA 4KH3A 1QRCA 3KRGA 3GQ9A 4EW9A 3P4GA 1KTWA 4YDTA 1PXZA 1PLUA 1QCXA 1K4ZA 4HWVA
chains in the Genus database with same CATH topology
1K8FA 1QA2A 1QQ1A 2XC1A 2F3LA 2BM7A 4OJPA 4V02C 5JMCB 1QA3A 1WXRA 1QRBA 2YUHA 2J8IA 2VFOA 1CLWA 1TYUA 2IOUG 3H09A 1TYVA 3PETA 2B0RA 2VFMA 3RIQA 2BM6A 3TH0A 1HF2A 1QA1A 3ML3A 4OM9A 2BX6A 2BM4A 2VFQA 3N90A 2W7ZA 4OJ6A 3N6ZA 1LKTA 2VNLA 4OJ5A 3JX8A 3AK5A 1TYXA 1TYWA 2G0YA 3SZEA 1DABA 3BH6B 3LYCA 1KQ5A 1TSPA 5JLVC 2VFNA 4OPWA 2VFPA 3BH7B 4KH3A 1QRCA 4OJOA 3SYJA 3P4GA 4JRAC 4OJLA 2VKYB 2BM5A 1K4ZA 3LJYA 2V5IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QA2 A;  1WXR A;  1QQ1 A;  2XC1 A;  1QA3 A;  1QRB A;  3H09 A;  2VFO A;  1CLW A;  1TYU A;  2IOU G;  1TYV A;  2VFM A;  3RIQ A;  3TH0 A;  1QA1 A;  3ML3 A;  4OM9 A;  2VFQ A;  2VNL A;  1LKT A;  3AK5 A;  1TYX A;  1TYW A;  3SZE A;  1DAB A;  1TSP A;  2VFN A;  2VFP A;  4KH3 A;  1QRC A;  3SYJ A;  2VKY B;  2V5I A; 
#chains in the Genus database with same CATH topology
 2XC1 A;  2INU A;  2BM7 A;  4OJP A;  4PMH A;  3VSU A;  1QRB A;  2YUH A;  2VFO A;  1TYU A;  3B90 A;  1XG2 A;  2XT2 A;  3EQN A;  1OFL A;  1LLZ A;  4XR6 A;  1O8J A;  1CZF A;  1OFE A;  2X6W A;  4MR0 A;  4OJ6 A;  4XLH A;  1HF2 A;  2J8K A;  1BHE A;  4U4B A;  2VBM A;  2VBK A;  3N6Z A;  4YEL A;  3JUR A;  4YEJ A;  1O8D A;  2O0W A;  3GRH A;  3NAW A;  2G0Y A;  3SZE A;  4C2L A;  4XQF A;  1O88 A;  1JRG A;  2NZM A;  3AK5 A;  4W8R A;  1OFD A;  5JLV C;  1O8M A;  4XON A;  2QYU A;  1O8F A;  3BH7 B;  4OJO A;  2VJJ A;  1IDK A;  1OGO X;  1O8L A;  4XL9 A;  4XOT A;  4XOR A;  3VST A;  3ZPP A;  2O17 A;  4XOP A;  3LJY A;  2V5I A;  1QQ1 A;  2F3L A;  1LM1 A;  4YZ0 A;  1IA5 A;  5C1C A;  3GQ7 A;  2J8I A;  2IOU G;  2INV A;  2NSP A;  1RMG A;  1X0C A;  2BM6 A;  3TH0 A;  1O8I A;  4I84 A;  2EWE A;  1RWR A;  2XTY A;  4XLE A;  4XN0 A;  3ML3 A;  4OM9 A;  3N90 A;  2O04 A;  2VFQ A;  4XNF A;  3SQV A;  1LKT A;  3NB2 A;  4XN3 A;  1EE6 A;  2NT9 A;  1DAB A;  2Z8G A;  3GQA A;  3PSZ A;  4W8S A;  2VJI A;  1DBG A;  4YZQ A;  2O6W A;  2UVF A;  3PSS A;  1OFM A;  2QXZ A;  3SYJ A;  2NTQ A;  4YEI A;  4OJL A;  2BM5 A;  4Z03 A;  2PYG A;  1K5C A;  3B4N A;  2QY1 A;  1O8K A;  4V02 C;  2QX3 A;  1QA3 A;  2ODL A;  1WXR A;  1EA0 A;  1O8E A;  1RU4 A;  3SUC A;  2X85 A;  3GQ8 A;  3H09 A;  4AVZ A;  3EQO A;  2XTX A;  1KCD A;  2O1D A;  3B8Y A;  1L1I A;  1JTA A;  2VFM A;  4OZY A;  4U49 A;  4OZZ A;  3RIQ A;  4XKW A;  4YZA A;  1GQ8 A;  1QA1 A;  2BM4 A;  1OOC A;  1H80 A;  1PE9 A;  1DBO A;  1VBL A;  2BX6 A;  2O0V A;  2X3H A;  3FY3 A;  4OJ5 A;  4W8Q A;  3T9G A;  3UW0 A;  2NT6 A;  3SY2 A;  1BN8 A;  1OGM X;  1TYW A;  2PYH A;  4XLC A;  2X6X A;  3BH6 B;  1HG8 A;  2VFN A;  3DU1 X;  4XKV A;  1KCC A;  3LMW A;  4JRA C;  2VKY B;  4XMY A;  1K8F A;  2XT4 A;  1QA2 A;  1QJV A;  2PEC A;  4YCQ A;  4XLA A;  5JMC B;  1CLW A;  1O8G A;  2IQ7 A;  4MXN A;  1IB4 A;  1TYV A;  2XTW A;  4URR A;  4W8T A;  1AIR A;  1IDJ A;  2B0R A;  2NST A;  3PET A;  4XM3 A;  1O8H A;  4YZX A;  3VMV A;  2NTP A;  2BSP A;  4Z06 A;  1WMR A;  3ZSC A;  4YC5 A;  2VNL A;  2W7Z A;  4YFO A;  5C1E A;  1NHC A;  3WWG A;  2VBE A;  2QZA A;  1EZG A;  3JX8 A;  4Z05 A;  5DNS A;  2NTB A;  1TYX A;  5AMV A;  4NK8 A;  3VMW A;  2UVE A;  3LYC A;  1KQ5 A;  1TSP A;  4NK6 A;  1LLW A;  4OPW A;  2VFP A;  4XLF A;  3VSV A;  2X6Y A;  4KH3 A;  1QRC A;  3KRG A;  3GQ9 A;  4EW9 A;  3P4G A;  1KTW A;  4YDT A;  1PXZ A;  1PLU A;  1QCX A;  1K4Z A;  4HWV A; 
#chains in the Genus database with same CATH homology
 1K8F A;  1QA2 A;  1QQ1 A;  2XC1 A;  2F3L A;  2BM7 A;  4OJP A;  4V02 C;  5JMC B;  1QA3 A;  1WXR A;  1QRB A;  2YUH A;  2J8I A;  2VFO A;  1CLW A;  1TYU A;  2IOU G;  3H09 A;  1TYV A;  3PET A;  2B0R A;  2VFM A;  3RIQ A;  2BM6 A;  3TH0 A;  1HF2 A;  1QA1 A;  3ML3 A;  4OM9 A;  2BX6 A;  2BM4 A;  2VFQ A;  3N90 A;  2W7Z A;  4OJ6 A;  3N6Z A;  1LKT A;  2VNL A;  4OJ5 A;  3JX8 A;  3AK5 A;  1TYX A;  1TYW A;  2G0Y A;  3SZE A;  1DAB A;  3BH6 B;  3LYC A;  1KQ5 A;  1TSP A;  5JLV C;  2VFN A;  4OPW A;  2VFP A;  3BH7 B;  4KH3 A;  1QRC A;  4OJO A;  3SYJ A;  3P4G A;  4JRA C;  4OJL A;  2VKY B;  2BM5 A;  1K4Z A;  3LJY A;  2V5I A; 
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similar chains in the pdb database (?% sequence similarity)

 
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