2XC1A

Full-length tailspike protein mutant y108w of bacteriophage p22
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
660
structure length
660
Chain Sequence
VVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQITQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDANGSQVDYIANVLKWDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDRDYNFYGGETVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQSLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGAGSGSAYTQLTAISGSTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords BIFUNCTIONAL TAIL PROTEIN
publication title Bacteriophage P22 Tailspike: Structure of the Complete Protein and Function of the Interdomain Linker
pubmed doi rcsb
source organism Enterobacteria phage p22
total genus 218
structure length 660
sequence length 660
chains with identical sequence B, C
ec nomenclature ec 3.2.1.-:
pdb deposition date 2010-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF09251 PhageP22-tail Salmonella phage P22 tail-spike
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.20 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 2xc1A02
2.170.14.10 Mainly Beta Beta Complex Tailspike Protein; Chain Phage P22 tailspike-like, N-terminal domain 2xc1A01
3SYJA 2VFQA 2VFOA 4OM9A 1QRBA 1LKTA 1TYXA 1TSPA 1CLWA 1TYUA 1WXRA 3AK5A 2VFPA 3RIQA 3H09A 2VNLA 2VFMA 3ML3A 2VFNA 1DABA 1QRCA 1QA1A 1TYWA 2V5IA 1QA2A 2IOUG 2VKYB 3TH0A 4KH3A 3SZEA 2XC1A 1QQ1A 1QA3A 1TYVA
chains in the Genus database with same CATH superfamily
1HG8A 4OJLA 2VJIA 2O6WA 4C2LA 4OJPA 3GRHA 1QRBA 1TYXA 4OJOA 3JX8A 1HF2A 4Z05A 2NTBA 3VMVA 1KTWA 1XG2A 4Z06A 4OJ5A 1O8IA 1GQ8A 3AK5A 2O0VA 4OJ6A 2VNLA 4I84A 2INVA 1PE9A 1OFEA 2NTQA 1BHEA 2X6XA 2BM5A 2VFNA 4XOPA 1OGMX 1JTAA 4EW9A 1DABA 2NT6A 4MXNA 1DBOA 4XR6A 2J8KA 3GQ9A 2ODLA 4W8RA 2EWEA 2BM7A 4XLEA 4YZXA 4YEIA 3KRGA 2XC1A 1PLUA 4YDTA 3GQ8A 2J8IA 2QX3A 1IDJA 1QQ1A 2BM6A 1TYVA 2XTYA 3SYJA 2NT9A 2XT4A 2Z8GA 4YFOA 3VSVA 2O04A 3FY3A 2UVFA 1LKTA 1CLWA 1TSPA 2O17A 2W7ZA 1PXZA 4W8TA 3LMWA 3H09A 2INUA 1K5CA 1LM1A 2VFMA 1IA5A 4XKWA 1OOCA 4U49A 3ML3A 2YUHA 1RWRA 3PSSA 4MR0A 1AIRA 4JRAC 2NTPA 1IDKA 5C1CA 4NK8A 1O8FA 1QRCA 2BX6A 1BN8A 3B4NA 1QA1A 2VBMA 4YELA 2PECA 4XMYA 2BSPA 1CZFA 1WMRA 2X6YA 1OFMA 4XLAA 3SQVA 1RMGA 1KCDA 4YZAA 3VMWA 1KQ5A 1DBGA 2PYGA 3TH0A 3ZSCA 2IQ7A 3NAWA 4YZQA 1O8EA 1QA3A 4XOTA 2BM4A 1OFLA 2QZAA 5JLVC 1QJVA 1LLZA 2X6WA 1QCXA 1H80A 4XNFA 3B8YA 4XONA 2QXZA 1WXRA 4YZ0A 4U4BA 4XLCA 2VBKA 3GQAA 4XN0A 4YC5A 2O0WA 1LLWA 1O8LA 4XL9A 3SUCA 2VBEA 2X3HA 1K8FA 1O8GA 4W8QA 2NSTA 1EZGA 2XTWA 4HWVA 1NHCA 1KCCA 4YEJA 2XT2A 3N90A 2NZMA 3B90A 3P4GA 1X0CA 4URRA 3GQ7A 4OZZA 3BH6B 2VJJA 3UW0A 2G0YA 4XORA 1JRGA 1O8JA 3LYCA 1O8KA 4PMHA 4YCQA 4Z03A 5C1EA 1O8DA 2QYUA 2X85A 3JURA 3VSUA 2VFQA 4XM3A 1RU4A 2VFOA 3T9GA 4OM9A 3WWGA 3SY2A 4OPWA 1IB4A 4XQFA 2PYHA 1TYUA 3BH7B 3LJYA 4XN3A 1L1IA 1O8MA 1OGOX 2VFPA 3RIQA 1VBLA 1OFDA 3EQNA 3PETA 3DU1X 4XLHA 2XTXA 3VSTA 3PSZA 2UVEA 1O88A 2F3LA 4XLFA 4V02C 2QY1A 1TYWA 2B0RA 5JMCB 4NK6A 2NSPA 2V5IA 5DNSA 3N6ZA 4AVZA 5AMVA 1O8HA 1QA2A 1K4ZA 2IOUG 3ZPPA 4XKVA 3EQOA 2VKYB 4KH3A 1EA0A 3SZEA 2O1DA 1EE6A 4W8SA 3NB2A 4OZYA
chains in the Genus database with same CATH topology
3SYJA 2VFQA 4OJLA 2VFOA 5JLVC 4OM9A 4OJPA 4OPWA 1QRBA 1LKTA 1TYXA 4OJOA 3JX8A 1CLWA 1HF2A 1TSPA 1TYUA 3BH7B 3LJYA 1WXRA 2W7ZA 4OJ5A 3AK5A 2VFPA 4OJ6A 3RIQA 3H09A 2VNLA 1K8FA 3PETA 2VFMA 2BM5A 2VFNA 2YUHA 3ML3A 4JRAC 1DABA 1QRCA 2BX6A 2F3LA 3N90A 4V02C 1TYWA 2B0RA 5JMCB 1QA1A 2V5IA 3N6ZA 3P4GA 1QA2A 1K4ZA 2IOUG 1KQ5A 2BM7A 2G0YA 3BH6B 4KH3A 3TH0A 2VKYB 3SZEA 2XC1A 3LYCA 1TYVA 2J8IA 1QQ1A 2BM6A 1QA3A 2BM4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SYJ A;  2VFQ A;  2VFO A;  4OM9 A;  1QRB A;  1LKT A;  1TYX A;  1TSP A;  1CLW A;  1TYU A;  1WXR A;  3AK5 A;  2VFP A;  3RIQ A;  3H09 A;  2VNL A;  2VFM A;  3ML3 A;  2VFN A;  1DAB A;  1QRC A;  1QA1 A;  1TYW A;  2V5I A;  1QA2 A;  2IOU G;  2VKY B;  3TH0 A;  4KH3 A;  3SZE A;  2XC1 A;  1QQ1 A;  1QA3 A;  1TYV A; 
#chains in the Genus database with same CATH topology
 1HG8 A;  4OJL A;  2VJI A;  2O6W A;  4C2L A;  4OJP A;  3GRH A;  1QRB A;  1TYX A;  4OJO A;  3JX8 A;  1HF2 A;  4Z05 A;  2NTB A;  3VMV A;  1KTW A;  1XG2 A;  4Z06 A;  4OJ5 A;  1O8I A;  1GQ8 A;  3AK5 A;  2O0V A;  4OJ6 A;  2VNL A;  4I84 A;  2INV A;  1PE9 A;  1OFE A;  2NTQ A;  1BHE A;  2X6X A;  2BM5 A;  2VFN A;  4XOP A;  1OGM X;  1JTA A;  4EW9 A;  1DAB A;  2NT6 A;  4MXN A;  1DBO A;  4XR6 A;  2J8K A;  3GQ9 A;  2ODL A;  4W8R A;  2EWE A;  2BM7 A;  4XLE A;  4YZX A;  4YEI A;  3KRG A;  2XC1 A;  1PLU A;  4YDT A;  3GQ8 A;  2J8I A;  2QX3 A;  1IDJ A;  1QQ1 A;  2BM6 A;  1TYV A;  2XTY A;  3SYJ A;  2NT9 A;  2XT4 A;  2Z8G A;  4YFO A;  3VSV A;  2O04 A;  3FY3 A;  2UVF A;  1LKT A;  1CLW A;  1TSP A;  2O17 A;  2W7Z A;  1PXZ A;  4W8T A;  3LMW A;  3H09 A;  2INU A;  1K5C A;  1LM1 A;  2VFM A;  1IA5 A;  4XKW A;  1OOC A;  4U49 A;  3ML3 A;  2YUH A;  1RWR A;  3PSS A;  4MR0 A;  1AIR A;  4JRA C;  2NTP A;  1IDK A;  5C1C A;  4NK8 A;  1O8F A;  1QRC A;  2BX6 A;  1BN8 A;  3B4N A;  1QA1 A;  2VBM A;  4YEL A;  2PEC A;  4XMY A;  2BSP A;  1CZF A;  1WMR A;  2X6Y A;  1OFM A;  4XLA A;  3SQV A;  1RMG A;  1KCD A;  4YZA A;  3VMW A;  1KQ5 A;  1DBG A;  2PYG A;  3TH0 A;  3ZSC A;  2IQ7 A;  3NAW A;  4YZQ A;  1O8E A;  1QA3 A;  4XOT A;  2BM4 A;  1OFL A;  2QZA A;  5JLV C;  1QJV A;  1LLZ A;  2X6W A;  1QCX A;  1H80 A;  4XNF A;  3B8Y A;  4XON A;  2QXZ A;  1WXR A;  4YZ0 A;  4U4B A;  4XLC A;  2VBK A;  3GQA A;  4XN0 A;  4YC5 A;  2O0W A;  1LLW A;  1O8L A;  4XL9 A;  3SUC A;  2VBE A;  2X3H A;  1K8F A;  1O8G A;  4W8Q A;  2NST A;  1EZG A;  2XTW A;  4HWV A;  1NHC A;  1KCC A;  4YEJ A;  2XT2 A;  3N90 A;  2NZM A;  3B90 A;  3P4G A;  1X0C A;  4URR A;  3GQ7 A;  4OZZ A;  3BH6 B;  2VJJ A;  3UW0 A;  2G0Y A;  4XOR A;  1JRG A;  1O8J A;  3LYC A;  1O8K A;  4PMH A;  4YCQ A;  4Z03 A;  5C1E A;  1O8D A;  2QYU A;  2X85 A;  3JUR A;  3VSU A;  2VFQ A;  4XM3 A;  1RU4 A;  2VFO A;  3T9G A;  4OM9 A;  3WWG A;  3SY2 A;  4OPW A;  1IB4 A;  4XQF A;  2PYH A;  1TYU A;  3BH7 B;  3LJY A;  4XN3 A;  1L1I A;  1O8M A;  1OGO X;  2VFP A;  3RIQ A;  1VBL A;  1OFD A;  3EQN A;  3PET A;  3DU1 X;  4XLH A;  2XTX A;  3VST A;  3PSZ A;  2UVE A;  1O88 A;  2F3L A;  4XLF A;  4V02 C;  2QY1 A;  1TYW A;  2B0R A;  5JMC B;  4NK6 A;  2NSP A;  2V5I A;  5DNS A;  3N6Z A;  4AVZ A;  5AMV A;  1O8H A;  1QA2 A;  1K4Z A;  2IOU G;  3ZPP A;  4XKV A;  3EQO A;  2VKY B;  4KH3 A;  1EA0 A;  3SZE A;  2O1D A;  1EE6 A;  4W8S A;  3NB2 A;  4OZY A; 
#chains in the Genus database with same CATH homology
 3SYJ A;  2VFQ A;  4OJL A;  2VFO A;  5JLV C;  4OM9 A;  4OJP A;  4OPW A;  1QRB A;  1LKT A;  1TYX A;  4OJO A;  3JX8 A;  1CLW A;  1HF2 A;  1TSP A;  1TYU A;  3BH7 B;  3LJY A;  1WXR A;  2W7Z A;  4OJ5 A;  3AK5 A;  2VFP A;  4OJ6 A;  3RIQ A;  3H09 A;  2VNL A;  1K8F A;  3PET A;  2VFM A;  2BM5 A;  2VFN A;  2YUH A;  3ML3 A;  4JRA C;  1DAB A;  1QRC A;  2BX6 A;  2F3L A;  3N90 A;  4V02 C;  1TYW A;  2B0R A;  5JMC B;  1QA1 A;  2V5I A;  3N6Z A;  3P4G A;  1QA2 A;  1K4Z A;  2IOU G;  1KQ5 A;  2BM7 A;  2G0Y A;  3BH6 B;  4KH3 A;  3TH0 A;  2VKY B;  3SZE A;  2XC1 A;  3LYC A;  1TYV A;  2J8I A;  1QQ1 A;  2BM6 A;  1QA3 A;  2BM4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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