2Z8GA

Aspergillus niger atcc9642 isopullulanase complexed with isopanose
Total Genus 183
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
183
sequence length
549
structure length
549
Chain Sequence
b'REFMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASSSLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSSANSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
pubmed doi rcsb
molecule keywords Isopullulanase
source organism Aspergillus niger
molecule tags Hydrolase
total genus 183
structure length 549
sequence length 549
chains with identical sequence B
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2007-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 2z8gA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 2z8gA02
1O8JA 4XORA 2O17A 4XLFA 4XKVA 1OFMA 4XLEA 4OZZA 3VMVA 4NK6A 4NK8A 2NSPA 4C2LA 1O8LA 1PLUA 4XN3A 1IDJA 2EWEA 1JRGA 1H80A 2PYGA 1O8MA 3LMWA 5AMVA 3VMWA 4URRA 1KCDA 4U4BA 1XG2A 4YZAA 3GRHA 1OFLA 1PE9A 1OGMX 1GQ8A 1IB4A 4MXNA 3VSVA 1BN8A 1DBOA 3B8YA 4XMYA 4XM3A 2VBKA 2X3HA 4YZQA 3GQAA 1PXZA 2VJIA 3ZSCA 2UVFA 1RWRA 2UVEA 4OJ5A 3B4NA 2X6YA 4Z06A 2O1DA 2O0VA 4AVZA 3GQ9A 4W8RA 4HWVA 2NTBA 1O8DA 1JTAA 4YZXA 1O8GA 1QCXA 1RU4A 4XNFA 5C1CA 4W8QA 1O8HA 4XLHA 1EE6A 2NT9A 4XLAA 2PYHA 3GQ8A 4YZ0A 1BHEA 1O8IA 4MR0A 2NSTA 4XN0A 2O04A 4I84A 4XKWA 4YEJA 3WWGA 2Z8GA 4XOTA 3B90A 1IDKA 1O8KA 1HG8A 4OJ6A 2QXZA 1K5CA 4XL9A 1OOCA 4XONA 2INVA 2O0WA 2INUA 2X85A 2IQ7A 3EQOA 4XLCA 2NT6A 1VBLA 4XR6A 1O8FA 3SUCA 3UW0A 3VSUA 4OJLA 1NHCA 2NZMA 1O88A 4OJOA 2NTQA 2PECA 4Z05A 3VSTA 1DBGA 2QY1A 1X0CA 3GQ7A 3KRGA 2X6WA 4XOPA 1WMRA 4U49A 2ODLA 1RMGA 3ZPPA 1CZFA 4Z03A 2NTPA 1OGOX 4EW9A 5C1EA 3T9GA 3EQNA 3FY3A 4PMHA 4W8SA 4YELA 2VBMA 1IA5A 2X6XA 1O8EA 1KTWA 1AIRA 3JURA 4OZYA 4OJPA 1KCCA 2BSPA 2QX3A 2VJJA 4W8TA 4XQFA 1QJVA 2VBEA
chains in the Genus database with same CATH superfamily
2V5IA 1QA1A 1O8JA 1LLWA 4XORA 2O17A 4XLFA 4XKVA 2BM4A 1WXRA 1OFMA 1K4ZA 4OZZA 1LLZA 4XLEA 3VMVA 4NK6A 2J8KA 4NK8A 2NSPA 4C2LA 1O8LA 1PLUA 2BM5A 3PETA 4XN3A 1IDJA 2BM7A 2XC1A 2EWEA 1JRGA 2VFOA 3N90A 1H80A 2PYGA 1QQ1A 3NB2A 1O8MA 3LMWA 5AMVA 3VMWA 1EA0A 3PSZA 4URRA 1KCDA 4U4BA 1XG2A 4YZAA 3GRHA 1TYVA 2YUHA 1OFLA 1PE9A 1OGMX 1EZGA 1GQ8A 2VFQA 2XTWA 1L1IA 1IB4A 4MXNA 2J8IA 4KH3A 3VSVA 1BN8A 1DBOA 3B8YA 4XMYA 4XM3A 2VBKA 2X3HA 4YZQA 1QA2A 3GQAA 1PXZA 2VJIA 1KQ5A 3ZSCA 1QRCA 2UVFA 1TYXA 1RWRA 3SZEA 2UVEA 4OJ5A 3B4NA 2X6YA 4Z06A 2BM6A 2O1DA 4V02C 1K8FA 2O0VA 4AVZA 5JMCB 3GQ9A 4W8RA 4HWVA 2NTBA 1O8DA 1JTAA 2VFMA 4YC5A 1O8GA 1CLWA 1QCXA 2XT2A 3LYCA 1TYWA 4YZXA 1RU4A 4XNFA 5C1CA 4W8QA 2QZAA 3SQVA 1O8HA 1DABA 4XLHA 1EE6A 2NT9A 4XLAA 3RIQA 4XQFA 2PYHA 3GQ8A 1TSPA 1OFDA 2VFNA 1QRBA 4YZ0A 1BHEA 4YCQA 2F3LA 1O8IA 4JRAC 4MR0A 2BX6A 2NSTA 4OM9A 4XN0A 4YEIA 4YFOA 2O04A 2XTYA 4I84A 4XKWA 4YEJA 5JLVC 3WWGA 3H09A 2Z8GA 4XOTA 3B90A 1IDKA 1O8KA 3AK5A 1HG8A 4OJ6A 2QXZA 1K5CA 3BH6B 4XL9A 1OOCA 3SYJA 4XONA 2INVA 3N6ZA 2O0WA 4OPWA 1OFEA 2INUA 2X85A 2IQ7A 2W7ZA 2QYUA 3EQOA 3PSSA 2NT6A 1VBLA 4XLCA 1O8FA 4XR6A 3SUCA 3P4GA 3UW0A 3VSUA 2VFPA 2O6WA 4OJLA 5DNSA 2NZMA 1LM1A 1NHCA 1O88A 2XTXA 4OJOA 2NTQA 2PECA 4Z05A 3VSTA 1DBGA 2QY1A 1X0CA 3GQ7A 1HF2A 2X6WA 3KRGA 4XOPA 1WMRA 3SY2A 2G0YA 4U49A 2ODLA 1RMGA 3ZPPA 3DU1X 1TYUA 1CZFA 4Z03A 2IOUG 3TH0A 2NTPA 1OGOX 4EW9A 5C1EA 3T9GA 3EQNA 3FY3A 4PMHA 4W8SA 4YELA 2VBMA 4YDTA 1IA5A 2X6XA 3LJYA 2B0RA 1O8EA 1KTWA 1AIRA 3JURA 4OZYA 4OJPA 3NAWA 1KCCA 2BSPA 2XT4A 2QX3A 2VJJA 3JX8A 3ML3A 4W8TA 1QA3A 1QJVA 3BH7B 2VBEA
chains in the Genus database with same CATH topology
1O8JA 4XORA 2O17A 4XLFA 4XKVA 1OFMA 4XLEA 4OZZA 3VMVA 4NK6A 4NK8A 2NSPA 4C2LA 1O8LA 1PLUA 4XN3A 1IDJA 2EWEA 1JRGA 1H80A 2PYGA 1O8MA 3LMWA 5AMVA 3VMWA 4URRA 1KCDA 4U4BA 1XG2A 4YZAA 3GRHA 1OFLA 1PE9A 1OGMX 1GQ8A 1IB4A 4MXNA 3VSVA 1BN8A 1DBOA 3B8YA 4XMYA 4XM3A 2VBKA 2X3HA 4YZQA 3GQAA 1PXZA 2VJIA 3ZSCA 2UVFA 1RWRA 2UVEA 4OJ5A 3B4NA 2X6YA 4Z06A 2O1DA 2O0VA 4AVZA 3GQ9A 4W8RA 4HWVA 2NTBA 1O8DA 1JTAA 4YZXA 1O8GA 1QCXA 1RU4A 4XNFA 5C1CA 4W8QA 1O8HA 4XLHA 1EE6A 2NT9A 4XLAA 2PYHA 3GQ8A 4YZ0A 1BHEA 1O8IA 4MR0A 2NSTA 4XN0A 2O04A 4I84A 4XKWA 4YEJA 3WWGA 2Z8GA 4XOTA 3B90A 1IDKA 1O8KA 1HG8A 4OJ6A 2QXZA 1K5CA 4XL9A 1OOCA 4XONA 2INVA 2O0WA 2INUA 2X85A 2IQ7A 3EQOA 4XLCA 2NT6A 1VBLA 4XR6A 1O8FA 3SUCA 3UW0A 3VSUA 4OJLA 1NHCA 2NZMA 1O88A 4OJOA 2NTQA 2PECA 4Z05A 3VSTA 1DBGA 2QY1A 1X0CA 3GQ7A 3KRGA 2X6WA 4XOPA 1WMRA 4U49A 2ODLA 1RMGA 3ZPPA 1CZFA 4Z03A 2NTPA 1OGOX 4EW9A 5C1EA 3T9GA 3EQNA 3FY3A 4PMHA 4W8SA 4YELA 2VBMA 1IA5A 2X6XA 1O8EA 1KTWA 1AIRA 3JURA 4OZYA 4OJPA 1KCCA 2BSPA 2QX3A 2VJJA 4W8TA 4XQFA 1QJVA 2VBEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1O8J A;  4XOR A;  2O17 A;  4XLF A;  4XKV A;  1OFM A;  4XLE A;  4OZZ A;  3VMV A;  4NK6 A;  4NK8 A;  2NSP A;  4C2L A;  1O8L A;  1PLU A;  4XN3 A;  1IDJ A;  2EWE A;  1JRG A;  1H80 A;  2PYG A;  1O8M A;  3LMW A;  5AMV A;  3VMW A;  4URR A;  1KCD A;  4U4B A;  1XG2 A;  4YZA A;  3GRH A;  1OFL A;  1PE9 A;  1OGM X;  1GQ8 A;  1IB4 A;  4MXN A;  3VSV A;  1BN8 A;  1DBO A;  3B8Y A;  4XMY A;  4XM3 A;  2VBK A;  2X3H A;  4YZQ A;  3GQA A;  1PXZ A;  2VJI A;  3ZSC A;  2UVF A;  1RWR A;  2UVE A;  4OJ5 A;  3B4N A;  2X6Y A;  4Z06 A;  2O1D A;  2O0V A;  4AVZ A;  3GQ9 A;  4W8R A;  4HWV A;  2NTB A;  1O8D A;  1JTA A;  4YZX A;  1O8G A;  1QCX A;  1RU4 A;  4XNF A;  5C1C A;  4W8Q A;  1O8H A;  4XLH A;  1EE6 A;  2NT9 A;  4XLA A;  2PYH A;  3GQ8 A;  4YZ0 A;  1BHE A;  1O8I A;  4MR0 A;  2NST A;  4XN0 A;  2O04 A;  4I84 A;  4XKW A;  4YEJ A;  3WWG A;  2Z8G A;  4XOT A;  3B90 A;  1IDK A;  1O8K A;  1HG8 A;  4OJ6 A;  2QXZ A;  1K5C A;  4XL9 A;  1OOC A;  4XON A;  2INV A;  2O0W A;  2INU A;  2X85 A;  2IQ7 A;  3EQO A;  4XLC A;  2NT6 A;  1VBL A;  4XR6 A;  1O8F A;  3SUC A;  3UW0 A;  3VSU A;  4OJL A;  1NHC A;  2NZM A;  1O88 A;  4OJO A;  2NTQ A;  2PEC A;  4Z05 A;  3VST A;  1DBG A;  2QY1 A;  1X0C A;  3GQ7 A;  3KRG A;  2X6W A;  4XOP A;  1WMR A;  4U49 A;  2ODL A;  1RMG A;  3ZPP A;  1CZF A;  4Z03 A;  2NTP A;  1OGO X;  4EW9 A;  5C1E A;  3T9G A;  3EQN A;  3FY3 A;  4PMH A;  4W8S A;  4YEL A;  2VBM A;  1IA5 A;  2X6X A;  1O8E A;  1KTW A;  1AIR A;  3JUR A;  4OZY A;  4OJP A;  1KCC A;  2BSP A;  2QX3 A;  2VJJ A;  4W8T A;  4XQF A;  1QJV A;  2VBE A; 
#chains in the Genus database with same CATH topology
 2V5I A;  1QA1 A;  1O8J A;  1LLW A;  4XOR A;  2O17 A;  4XLF A;  4XKV A;  2BM4 A;  1WXR A;  1OFM A;  1K4Z A;  4OZZ A;  1LLZ A;  4XLE A;  3VMV A;  4NK6 A;  2J8K A;  4NK8 A;  2NSP A;  4C2L A;  1O8L A;  1PLU A;  2BM5 A;  3PET A;  4XN3 A;  1IDJ A;  2BM7 A;  2XC1 A;  2EWE A;  1JRG A;  2VFO A;  3N90 A;  1H80 A;  2PYG A;  1QQ1 A;  3NB2 A;  1O8M A;  3LMW A;  5AMV A;  3VMW A;  1EA0 A;  3PSZ A;  4URR A;  1KCD A;  4U4B A;  1XG2 A;  4YZA A;  3GRH A;  1TYV A;  2YUH A;  1OFL A;  1PE9 A;  1OGM X;  1EZG A;  1GQ8 A;  2VFQ A;  2XTW A;  1L1I A;  1IB4 A;  4MXN A;  2J8I A;  4KH3 A;  3VSV A;  1BN8 A;  1DBO A;  3B8Y A;  4XMY A;  4XM3 A;  2VBK A;  2X3H A;  4YZQ A;  1QA2 A;  3GQA A;  1PXZ A;  2VJI A;  1KQ5 A;  3ZSC A;  1QRC A;  2UVF A;  1TYX A;  1RWR A;  3SZE A;  2UVE A;  4OJ5 A;  3B4N A;  2X6Y A;  4Z06 A;  2BM6 A;  2O1D A;  4V02 C;  1K8F A;  2O0V A;  4AVZ A;  5JMC B;  3GQ9 A;  4W8R A;  4HWV A;  2NTB A;  1O8D A;  1JTA A;  2VFM A;  4YC5 A;  1O8G A;  1CLW A;  1QCX A;  2XT2 A;  3LYC A;  1TYW A;  4YZX A;  1RU4 A;  4XNF A;  5C1C A;  4W8Q A;  2QZA A;  3SQV A;  1O8H A;  1DAB A;  4XLH A;  1EE6 A;  2NT9 A;  4XLA A;  3RIQ A;  4XQF A;  2PYH A;  3GQ8 A;  1TSP A;  1OFD A;  2VFN A;  1QRB A;  4YZ0 A;  1BHE A;  4YCQ A;  2F3L A;  1O8I A;  4JRA C;  4MR0 A;  2BX6 A;  2NST A;  4OM9 A;  4XN0 A;  4YEI A;  4YFO A;  2O04 A;  2XTY A;  4I84 A;  4XKW A;  4YEJ A;  5JLV C;  3WWG A;  3H09 A;  2Z8G A;  4XOT A;  3B90 A;  1IDK A;  1O8K A;  3AK5 A;  1HG8 A;  4OJ6 A;  2QXZ A;  1K5C A;  3BH6 B;  4XL9 A;  1OOC A;  3SYJ A;  4XON A;  2INV A;  3N6Z A;  2O0W A;  4OPW A;  1OFE A;  2INU A;  2X85 A;  2IQ7 A;  2W7Z A;  2QYU A;  3EQO A;  3PSS A;  2NT6 A;  1VBL A;  4XLC A;  1O8F A;  4XR6 A;  3SUC A;  3P4G A;  3UW0 A;  3VSU A;  2VFP A;  2O6W A;  4OJL A;  5DNS A;  2NZM A;  1LM1 A;  1NHC A;  1O88 A;  2XTX A;  4OJO A;  2NTQ A;  2PEC A;  4Z05 A;  3VST A;  1DBG A;  2QY1 A;  1X0C A;  3GQ7 A;  1HF2 A;  2X6W A;  3KRG A;  4XOP A;  1WMR A;  3SY2 A;  2G0Y A;  4U49 A;  2ODL A;  1RMG A;  3ZPP A;  3DU1 X;  1TYU A;  1CZF A;  4Z03 A;  2IOU G;  3TH0 A;  2NTP A;  1OGO X;  4EW9 A;  5C1E A;  3T9G A;  3EQN A;  3FY3 A;  4PMH A;  4W8S A;  4YEL A;  2VBM A;  4YDT A;  1IA5 A;  2X6X A;  3LJY A;  2B0R A;  1O8E A;  1KTW A;  1AIR A;  3JUR A;  4OZY A;  4OJP A;  3NAW A;  1KCC A;  2BSP A;  2XT4 A;  2QX3 A;  2VJJ A;  3JX8 A;  3ML3 A;  4W8T A;  1QA3 A;  1QJV A;  3BH7 B;  2VBE A; 
#chains in the Genus database with same CATH homology
 1O8J A;  4XOR A;  2O17 A;  4XLF A;  4XKV A;  1OFM A;  4XLE A;  4OZZ A;  3VMV A;  4NK6 A;  4NK8 A;  2NSP A;  4C2L A;  1O8L A;  1PLU A;  4XN3 A;  1IDJ A;  2EWE A;  1JRG A;  1H80 A;  2PYG A;  1O8M A;  3LMW A;  5AMV A;  3VMW A;  4URR A;  1KCD A;  4U4B A;  1XG2 A;  4YZA A;  3GRH A;  1OFL A;  1PE9 A;  1OGM X;  1GQ8 A;  1IB4 A;  4MXN A;  3VSV A;  1BN8 A;  1DBO A;  3B8Y A;  4XMY A;  4XM3 A;  2VBK A;  2X3H A;  4YZQ A;  3GQA A;  1PXZ A;  2VJI A;  3ZSC A;  2UVF A;  1RWR A;  2UVE A;  4OJ5 A;  3B4N A;  2X6Y A;  4Z06 A;  2O1D A;  2O0V A;  4AVZ A;  3GQ9 A;  4W8R A;  4HWV A;  2NTB A;  1O8D A;  1JTA A;  4YZX A;  1O8G A;  1QCX A;  1RU4 A;  4XNF A;  5C1C A;  4W8Q A;  1O8H A;  4XLH A;  1EE6 A;  2NT9 A;  4XLA A;  2PYH A;  3GQ8 A;  4YZ0 A;  1BHE A;  1O8I A;  4MR0 A;  2NST A;  4XN0 A;  2O04 A;  4I84 A;  4XKW A;  4YEJ A;  3WWG A;  2Z8G A;  4XOT A;  3B90 A;  1IDK A;  1O8K A;  1HG8 A;  4OJ6 A;  2QXZ A;  1K5C A;  4XL9 A;  1OOC A;  4XON A;  2INV A;  2O0W A;  2INU A;  2X85 A;  2IQ7 A;  3EQO A;  4XLC A;  2NT6 A;  1VBL A;  4XR6 A;  1O8F A;  3SUC A;  3UW0 A;  3VSU A;  4OJL A;  1NHC A;  2NZM A;  1O88 A;  4OJO A;  2NTQ A;  2PEC A;  4Z05 A;  3VST A;  1DBG A;  2QY1 A;  1X0C A;  3GQ7 A;  3KRG A;  2X6W A;  4XOP A;  1WMR A;  4U49 A;  2ODL A;  1RMG A;  3ZPP A;  1CZF A;  4Z03 A;  2NTP A;  1OGO X;  4EW9 A;  5C1E A;  3T9G A;  3EQN A;  3FY3 A;  4PMH A;  4W8S A;  4YEL A;  2VBM A;  1IA5 A;  2X6X A;  1O8E A;  1KTW A;  1AIR A;  3JUR A;  4OZY A;  4OJP A;  1KCC A;  2BSP A;  2QX3 A;  2VJJ A;  4W8T A;  4XQF A;  1QJV A;  2VBE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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