2Z8GA

Aspergillus niger atcc9642 isopullulanase complexed with isopanose
Total Genus 183
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
183
sequence length
549
structure length
549
Chain Sequence
b'REFMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASSSLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSSANSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Isopullulanase
publication title Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
pubmed doi rcsb
source organism Aspergillus niger
molecule tags Hydrolase
total genus 183
structure length 549
sequence length 549
chains with identical sequence B
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2007-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 2z8gA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 2z8gA02
2VBKA 4XLAA 2X85A 4XLEA 3ZPPA 2INUA 1QJVA 4XLCA 1IA5A 1BHEA 1O8MA 1H80A 2X3HA 1RMGA 1DBOA 4XN0A 1VBLA 5C1EA 1KCDA 1O8GA 4OZZA 1XG2A 4XR6A 4YZQA 4XORA 1GQ8A 2BSPA 4OJPA 2PECA 1JRGA 3SUCA 4NK8A 3T9GA 3B4NA 3FY3A 4XMYA 1X0CA 2PYHA 2UVEA 3JURA 4W8QA 1OGOX 5C1CA 4Z05A 4XOPA 3VMWA 1BN8A 4XONA 1IDJA 2VBMA 1RWRA 2NZMA 1O8JA 4W8SA 1KTWA 1OFLA 4OJ6A 4URRA 1QCXA 3VSUA 4XL9A 1PLUA 1KCCA 1O8LA 3UW0A 4XM3A 1IDKA 4YZ0A 1DBGA 4HWVA 4C2LA 2X6YA 1HG8A 2NTPA 4YZAA 4AVZA 2NTQA 4XLFA 4XKVA 4MR0A 1K5CA 2NSPA 2VJJA 1IB4A 1PXZA 2QY1A 4OJOA 4Z06A 4XNFA 3VSTA 1NHCA 5AMVA 2O04A 1O8EA 3GQAA 4U49A 2ODLA 3EQOA 1PE9A 4OJLA 1AIRA 2O1DA 1OOCA 4PMHA 3WWGA 3VSVA 4EW9A 2IQ7A 2QXZA 2O0WA 3ZSCA 3GQ9A 4XKWA 2UVFA 4U4BA 4I84A 4YZXA 1O8DA 4YELA 1OGMX 2QX3A 1CZFA 1O8IA 2X6WA 1OFMA 4W8TA 4XN3A 3KRGA 4Z03A 2PYGA 4OJ5A 4XQFA 2O17A 4NK6A 2EWEA 4OZYA 2Z8GA 2VJIA 1O8FA 3B8YA 4YEJA 3VMVA 1WMRA 2NSTA 3GQ8A 3GRHA 1O88A 2INVA 2NT9A 1RU4A 2VBEA 1EE6A 1JTAA 4XLHA 3EQNA 4XOTA 2X6XA 1O8HA 2NTBA 2O0VA 3GQ7A 3B90A 3LMWA 1O8KA 4MXNA 2NT6A 4W8RA
chains in the Genus database with same CATH superfamily
5JMCB 2VBKA 4XLAA 2VFOA 2X85A 3N6ZA 4XLEA 3SQVA 3ZPPA 3P4GA 3SY2A 2INUA 4YEIA 1WXRA 1QJVA 4XLCA 1IA5A 2V5IA 1BHEA 1O8MA 3N90A 3DU1X 1H80A 2X3HA 1TYXA 2YUHA 3ML3A 2VFNA 2VFPA 1QA1A 1RMGA 3LYCA 1DBOA 4XN0A 3BH7B 1VBLA 1KQ5A 4YDTA 5C1EA 1KCDA 1EA0A 1HF2A 1O8GA 1OFDA 4OZZA 3JX8A 1XG2A 4XR6A 4YZQA 4XORA 1TSPA 1GQ8A 1TYUA 2BSPA 4OJPA 2PECA 1JRGA 3SUCA 4NK8A 1CLWA 2BX6A 3T9GA 3B4NA 3FY3A 4XMYA 2G0YA 1X0CA 2PYHA 2UVEA 3JURA 4W8QA 1OGOX 5C1CA 1LM1A 4Z05A 4XOPA 2VFMA 3VMWA 1BN8A 4XONA 1IDJA 4OM9A 2F3LA 2VBMA 1RWRA 2NZMA 5DNSA 1O8JA 4W8SA 1KTWA 1OFLA 4OJ6A 4V02C 1QCXA 4URRA 3SZEA 3VSUA 4XL9A 1PLUA 1TYWA 3TH0A 3SYJA 3PSSA 1KCCA 2B0RA 1O8LA 3UW0A 4XM3A 1IDKA 4YZ0A 1DBGA 4JRAC 4HWVA 4C2LA 1DABA 2X6YA 1HG8A 2NTPA 4YZAA 4AVZA 2NTQA 4XLFA 4XKVA 4MR0A 1K5CA 3NB2A 2IOUG 2NSPA 2VJJA 3BH6B 1IB4A 1QA2A 1PXZA 2QY1A 5JLVC 4OJOA 2J8KA 4Z06A 4XNFA 3VSTA 1NHCA 4YC5A 5AMVA 1K8FA 2O04A 1O8EA 3GQAA 1QRBA 4U49A 2ODLA 3EQOA 1PE9A 4OJLA 1AIRA 2BM7A 1OOCA 2O1DA 3WWGA 1QRCA 4PMHA 1LLWA 4OPWA 2BM5A 2XTWA 3VSVA 2IQ7A 4EW9A 2QXZA 2O0WA 3ZSCA 4YCQA 3GQ9A 4XKWA 2UVFA 4U4BA 1L1IA 3RIQA 4I84A 4YZXA 1O8DA 4YELA 1LLZA 1OGMX 2QX3A 1CZFA 1O8IA 2X6WA 1OFMA 2BM4A 2XT4A 4W8TA 4XN3A 3KRGA 4Z03A 2PYGA 4OJ5A 2J8IA 4XQFA 2O17A 2O6WA 2EWEA 4NK6A 4OZYA 2XC1A 2Z8GA 1OFEA 2XTXA 2W7ZA 2VJIA 3AK5A 1O8FA 3B8YA 1EZGA 2XT2A 4YEJA 1TYVA 3VMVA 1WMRA 2NSTA 3GQ8A 3PETA 2VFQA 3GRHA 3LJYA 1O88A 3H09A 1K4ZA 2QZAA 3NAWA 2INVA 2NT9A 1RU4A 2VBEA 1EE6A 1JTAA 4KH3A 1QA3A 2BM6A 4XLHA 3EQNA 4XOTA 2X6XA 1O8HA 2NTBA 2O0VA 2XTYA 3GQ7A 3PSZA 4YFOA 1QQ1A 2QYUA 3B90A 3LMWA 1O8KA 4MXNA 2NT6A 4W8RA
chains in the Genus database with same CATH topology
2VBKA 4XLAA 2X85A 4XLEA 3ZPPA 2INUA 1QJVA 4XLCA 1IA5A 1BHEA 1O8MA 1H80A 2X3HA 1RMGA 1DBOA 4XN0A 1VBLA 5C1EA 1KCDA 1O8GA 4OZZA 1XG2A 4XR6A 4YZQA 4XORA 1GQ8A 2BSPA 4OJPA 2PECA 1JRGA 3SUCA 4NK8A 3T9GA 3B4NA 3FY3A 4XMYA 1X0CA 2PYHA 2UVEA 3JURA 4W8QA 1OGOX 5C1CA 4Z05A 4XOPA 3VMWA 1BN8A 4XONA 1IDJA 2VBMA 1RWRA 2NZMA 1O8JA 4W8SA 1KTWA 1OFLA 4OJ6A 4URRA 1QCXA 3VSUA 4XL9A 1PLUA 1KCCA 1O8LA 3UW0A 4XM3A 1IDKA 4YZ0A 1DBGA 4HWVA 4C2LA 2X6YA 1HG8A 2NTPA 4YZAA 4AVZA 2NTQA 4XLFA 4XKVA 4MR0A 1K5CA 2NSPA 2VJJA 1IB4A 1PXZA 2QY1A 4OJOA 4Z06A 4XNFA 3VSTA 1NHCA 5AMVA 2O04A 1O8EA 3GQAA 4U49A 2ODLA 3EQOA 1PE9A 4OJLA 1AIRA 2O1DA 1OOCA 4PMHA 3WWGA 3VSVA 4EW9A 2IQ7A 2QXZA 2O0WA 3ZSCA 3GQ9A 4XKWA 2UVFA 4U4BA 4I84A 4YZXA 1O8DA 4YELA 1OGMX 2QX3A 1CZFA 1O8IA 2X6WA 1OFMA 4W8TA 4XN3A 3KRGA 4Z03A 2PYGA 4OJ5A 4XQFA 2O17A 4NK6A 2EWEA 4OZYA 2Z8GA 2VJIA 1O8FA 3B8YA 4YEJA 3VMVA 1WMRA 2NSTA 3GQ8A 3GRHA 1O88A 2INVA 2NT9A 1RU4A 2VBEA 1EE6A 1JTAA 4XLHA 3EQNA 4XOTA 2X6XA 1O8HA 2NTBA 2O0VA 3GQ7A 3B90A 3LMWA 1O8KA 4MXNA 2NT6A 4W8RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VBK A;  4XLA A;  2X85 A;  4XLE A;  3ZPP A;  2INU A;  1QJV A;  4XLC A;  1IA5 A;  1BHE A;  1O8M A;  1H80 A;  2X3H A;  1RMG A;  1DBO A;  4XN0 A;  1VBL A;  5C1E A;  1KCD A;  1O8G A;  4OZZ A;  1XG2 A;  4XR6 A;  4YZQ A;  4XOR A;  1GQ8 A;  2BSP A;  4OJP A;  2PEC A;  1JRG A;  3SUC A;  4NK8 A;  3T9G A;  3B4N A;  3FY3 A;  4XMY A;  1X0C A;  2PYH A;  2UVE A;  3JUR A;  4W8Q A;  1OGO X;  5C1C A;  4Z05 A;  4XOP A;  3VMW A;  1BN8 A;  4XON A;  1IDJ A;  2VBM A;  1RWR A;  2NZM A;  1O8J A;  4W8S A;  1KTW A;  1OFL A;  4OJ6 A;  4URR A;  1QCX A;  3VSU A;  4XL9 A;  1PLU A;  1KCC A;  1O8L A;  3UW0 A;  4XM3 A;  1IDK A;  4YZ0 A;  1DBG A;  4HWV A;  4C2L A;  2X6Y A;  1HG8 A;  2NTP A;  4YZA A;  4AVZ A;  2NTQ A;  4XLF A;  4XKV A;  4MR0 A;  1K5C A;  2NSP A;  2VJJ A;  1IB4 A;  1PXZ A;  2QY1 A;  4OJO A;  4Z06 A;  4XNF A;  3VST A;  1NHC A;  5AMV A;  2O04 A;  1O8E A;  3GQA A;  4U49 A;  2ODL A;  3EQO A;  1PE9 A;  4OJL A;  1AIR A;  2O1D A;  1OOC A;  4PMH A;  3WWG A;  3VSV A;  4EW9 A;  2IQ7 A;  2QXZ A;  2O0W A;  3ZSC A;  3GQ9 A;  4XKW A;  2UVF A;  4U4B A;  4I84 A;  4YZX A;  1O8D A;  4YEL A;  1OGM X;  2QX3 A;  1CZF A;  1O8I A;  2X6W A;  1OFM A;  4W8T A;  4XN3 A;  3KRG A;  4Z03 A;  2PYG A;  4OJ5 A;  4XQF A;  2O17 A;  4NK6 A;  2EWE A;  4OZY A;  2Z8G A;  2VJI A;  1O8F A;  3B8Y A;  4YEJ A;  3VMV A;  1WMR A;  2NST A;  3GQ8 A;  3GRH A;  1O88 A;  2INV A;  2NT9 A;  1RU4 A;  2VBE A;  1EE6 A;  1JTA A;  4XLH A;  3EQN A;  4XOT A;  2X6X A;  1O8H A;  2NTB A;  2O0V A;  3GQ7 A;  3B90 A;  3LMW A;  1O8K A;  4MXN A;  2NT6 A;  4W8R A; 
#chains in the Genus database with same CATH topology
 5JMC B;  2VBK A;  4XLA A;  2VFO A;  2X85 A;  3N6Z A;  4XLE A;  3SQV A;  3ZPP A;  3P4G A;  3SY2 A;  2INU A;  4YEI A;  1WXR A;  1QJV A;  4XLC A;  1IA5 A;  2V5I A;  1BHE A;  1O8M A;  3N90 A;  3DU1 X;  1H80 A;  2X3H A;  1TYX A;  2YUH A;  3ML3 A;  2VFN A;  2VFP A;  1QA1 A;  1RMG A;  3LYC A;  1DBO A;  4XN0 A;  3BH7 B;  1VBL A;  1KQ5 A;  4YDT A;  5C1E A;  1KCD A;  1EA0 A;  1HF2 A;  1O8G A;  1OFD A;  4OZZ A;  3JX8 A;  1XG2 A;  4XR6 A;  4YZQ A;  4XOR A;  1TSP A;  1GQ8 A;  1TYU A;  2BSP A;  4OJP A;  2PEC A;  1JRG A;  3SUC A;  4NK8 A;  1CLW A;  2BX6 A;  3T9G A;  3B4N A;  3FY3 A;  4XMY A;  2G0Y A;  1X0C A;  2PYH A;  2UVE A;  3JUR A;  4W8Q A;  1OGO X;  5C1C A;  1LM1 A;  4Z05 A;  4XOP A;  2VFM A;  3VMW A;  1BN8 A;  4XON A;  1IDJ A;  4OM9 A;  2F3L A;  2VBM A;  1RWR A;  2NZM A;  5DNS A;  1O8J A;  4W8S A;  1KTW A;  1OFL A;  4OJ6 A;  4V02 C;  1QCX A;  4URR A;  3SZE A;  3VSU A;  4XL9 A;  1PLU A;  1TYW A;  3TH0 A;  3SYJ A;  3PSS A;  1KCC A;  2B0R A;  1O8L A;  3UW0 A;  4XM3 A;  1IDK A;  4YZ0 A;  1DBG A;  4JRA C;  4HWV A;  4C2L A;  1DAB A;  2X6Y A;  1HG8 A;  2NTP A;  4YZA A;  4AVZ A;  2NTQ A;  4XLF A;  4XKV A;  4MR0 A;  1K5C A;  3NB2 A;  2IOU G;  2NSP A;  2VJJ A;  3BH6 B;  1IB4 A;  1QA2 A;  1PXZ A;  2QY1 A;  5JLV C;  4OJO A;  2J8K A;  4Z06 A;  4XNF A;  3VST A;  1NHC A;  4YC5 A;  5AMV A;  1K8F A;  2O04 A;  1O8E A;  3GQA A;  1QRB A;  4U49 A;  2ODL A;  3EQO A;  1PE9 A;  4OJL A;  1AIR A;  2BM7 A;  1OOC A;  2O1D A;  3WWG A;  1QRC A;  4PMH A;  1LLW A;  4OPW A;  2BM5 A;  2XTW A;  3VSV A;  2IQ7 A;  4EW9 A;  2QXZ A;  2O0W A;  3ZSC A;  4YCQ A;  3GQ9 A;  4XKW A;  2UVF A;  4U4B A;  1L1I A;  3RIQ A;  4I84 A;  4YZX A;  1O8D A;  4YEL A;  1LLZ A;  1OGM X;  2QX3 A;  1CZF A;  1O8I A;  2X6W A;  1OFM A;  2BM4 A;  2XT4 A;  4W8T A;  4XN3 A;  3KRG A;  4Z03 A;  2PYG A;  4OJ5 A;  2J8I A;  4XQF A;  2O17 A;  2O6W A;  2EWE A;  4NK6 A;  4OZY A;  2XC1 A;  2Z8G A;  1OFE A;  2XTX A;  2W7Z A;  2VJI A;  3AK5 A;  1O8F A;  3B8Y A;  1EZG A;  2XT2 A;  4YEJ A;  1TYV A;  3VMV A;  1WMR A;  2NST A;  3GQ8 A;  3PET A;  2VFQ A;  3GRH A;  3LJY A;  1O88 A;  3H09 A;  1K4Z A;  2QZA A;  3NAW A;  2INV A;  2NT9 A;  1RU4 A;  2VBE A;  1EE6 A;  1JTA A;  4KH3 A;  1QA3 A;  2BM6 A;  4XLH A;  3EQN A;  4XOT A;  2X6X A;  1O8H A;  2NTB A;  2O0V A;  2XTY A;  3GQ7 A;  3PSZ A;  4YFO A;  1QQ1 A;  2QYU A;  3B90 A;  3LMW A;  1O8K A;  4MXN A;  2NT6 A;  4W8R A; 
#chains in the Genus database with same CATH homology
 2VBK A;  4XLA A;  2X85 A;  4XLE A;  3ZPP A;  2INU A;  1QJV A;  4XLC A;  1IA5 A;  1BHE A;  1O8M A;  1H80 A;  2X3H A;  1RMG A;  1DBO A;  4XN0 A;  1VBL A;  5C1E A;  1KCD A;  1O8G A;  4OZZ A;  1XG2 A;  4XR6 A;  4YZQ A;  4XOR A;  1GQ8 A;  2BSP A;  4OJP A;  2PEC A;  1JRG A;  3SUC A;  4NK8 A;  3T9G A;  3B4N A;  3FY3 A;  4XMY A;  1X0C A;  2PYH A;  2UVE A;  3JUR A;  4W8Q A;  1OGO X;  5C1C A;  4Z05 A;  4XOP A;  3VMW A;  1BN8 A;  4XON A;  1IDJ A;  2VBM A;  1RWR A;  2NZM A;  1O8J A;  4W8S A;  1KTW A;  1OFL A;  4OJ6 A;  4URR A;  1QCX A;  3VSU A;  4XL9 A;  1PLU A;  1KCC A;  1O8L A;  3UW0 A;  4XM3 A;  1IDK A;  4YZ0 A;  1DBG A;  4HWV A;  4C2L A;  2X6Y A;  1HG8 A;  2NTP A;  4YZA A;  4AVZ A;  2NTQ A;  4XLF A;  4XKV A;  4MR0 A;  1K5C A;  2NSP A;  2VJJ A;  1IB4 A;  1PXZ A;  2QY1 A;  4OJO A;  4Z06 A;  4XNF A;  3VST A;  1NHC A;  5AMV A;  2O04 A;  1O8E A;  3GQA A;  4U49 A;  2ODL A;  3EQO A;  1PE9 A;  4OJL A;  1AIR A;  2O1D A;  1OOC A;  4PMH A;  3WWG A;  3VSV A;  4EW9 A;  2IQ7 A;  2QXZ A;  2O0W A;  3ZSC A;  3GQ9 A;  4XKW A;  2UVF A;  4U4B A;  4I84 A;  4YZX A;  1O8D A;  4YEL A;  1OGM X;  2QX3 A;  1CZF A;  1O8I A;  2X6W A;  1OFM A;  4W8T A;  4XN3 A;  3KRG A;  4Z03 A;  2PYG A;  4OJ5 A;  4XQF A;  2O17 A;  4NK6 A;  2EWE A;  4OZY A;  2Z8G A;  2VJI A;  1O8F A;  3B8Y A;  4YEJ A;  3VMV A;  1WMR A;  2NST A;  3GQ8 A;  3GRH A;  1O88 A;  2INV A;  2NT9 A;  1RU4 A;  2VBE A;  1EE6 A;  1JTA A;  4XLH A;  3EQN A;  4XOT A;  2X6X A;  1O8H A;  2NTB A;  2O0V A;  3GQ7 A;  3B90 A;  3LMW A;  1O8K A;  4MXN A;  2NT6 A;  4W8R A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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