2Z8GA

Aspergillus niger atcc9642 isopullulanase complexed with isopanose
Total Genus 183
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
183
sequence length
549
structure length
549
Chain Sequence
REFMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASSSLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSSANSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
pubmed doi rcsb
source organism Aspergillus niger
molecule tags Hydrolase
molecule keywords Isopullulanase
total genus 183
structure length 549
sequence length 549
chains with identical sequence B
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2007-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 2z8gA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 2z8gA02
3KRGA 4I84A 4OJ5A 1OGMX 1DBOA 1PE9A 4OJOA 3EQOA 1K5CA 3GQ7A 3GQ8A 1WMRA 3ZSCA 4NK8A 1IA5A 3VSUA 2UVFA 2NT6A 1RU4A 5C1EA 2EWEA 2X6XA 4YZQA 2X3HA 3UW0A 4U49A 4XKVA 1GQ8A 3SUCA 2VJJA 1QCXA 4OJPA 2NTBA 1O8IA 2NSTA 2NZMA 2INVA 1NHCA 2O0WA 2X6YA 4XORA 1IB4A 3B90A 2VBMA 1QJVA 4YEJA 4U4BA 4W8TA 4XR6A 1XG2A 4Z06A 1IDJA 1CZFA 3VSVA 4AVZA 4W8SA 3FY3A 4Z03A 1JRGA 2ODLA 3LMWA 1OOCA 4XLFA 4OZYA 4OZZA 4XLEA 1PLUA 1VBLA 2QX3A 2NTPA 2BSPA 2VBKA 1O8EA 4EW9A 1O8LA 1BHEA 1O8JA 4XM3A 1O8FA 1OFMA 1BN8A 1O8GA 1OFLA 2PECA 3VMVA 2PYHA 1HG8A 2O17A 4XN3A 4XLHA 5C1CA 4C2LA 2VBEA 1RMGA 1PXZA 3T9GA 1DBGA 4Z05A 2X85A 4OJLA 1KCCA 4XNFA 3B8YA 1O8KA 1RWRA 4MXNA 4PMHA 2PYGA 4OJ6A 3VMWA 4YZ0A 4XONA 2NTQA 1AIRA 4W8QA 2Z8GA 3VSTA 3GQ9A 2QY1A 3ZPPA 4NK6A 1KCDA 1IDKA 4XN0A 4XOTA 4W8RA 2NT9A 2VJIA 3B4NA 2O0VA 4XL9A 4YZXA 1OGOX 1JTAA 2QXZA 4YZAA 1H80A 1O8HA 4XOPA 2O1DA 3WWGA 4HWVA 1O8MA 3EQNA 2O04A 2INUA 4XMYA 2IQ7A 4XLCA 2UVEA 4MR0A 5AMVA 4XLAA 3GQAA 4URRA 2NSPA 1EE6A 4XKWA 1KTWA 3GRHA 4YELA 4XQFA 1X0CA 1O8DA 1O88A 3JURA 2X6WA
chains in the Genus database with same CATH superfamily
3KRGA 2X6WA 4I84A 4OJ5A 4YEIA 1OGMX 1DBOA 1PE9A 2B0RA 2BM7A 3EQOA 4OPWA 4OJOA 5JMCB 1LLWA 1K5CA 3GQ7A 3GQ8A 1WMRA 3ZSCA 4NK8A 1IA5A 3VSUA 2UVFA 2NT6A 1RU4A 2BM5A 5C1EA 2EWEA 2J8KA 2X6XA 4KH3A 4YZQA 2X3HA 1WXRA 3UW0A 4U49A 3N6ZA 4XKVA 1GQ8A 1EZGA 2VFQA 3SUCA 1CLWA 2IOUG 2VJJA 3N90A 1QCXA 4OJPA 3SYJA 3AK5A 2NTBA 2VFNA 1O8IA 3PETA 2NSTA 1TYUA 2NZMA 2INVA 3JX8A 3SZEA 1NHCA 2O0WA 2X6YA 4XORA 3BH6B 3LJYA 3LYCA 3B90A 1IB4A 2XT2A 4YDTA 2VBMA 1QJVA 4YEJA 4U4BA 4W8TA 4XR6A 1XG2A 3DU1X 4Z06A 1IDJA 2BM6A 1CZFA 3VSVA 4YC5A 4AVZA 2XT4A 4W8SA 3FY3A 2BM4A 1JRGA 2ODLA 4Z03A 1HF2A 3LMWA 3TH0A 1OOCA 1TYXA 2XTYA 3P4GA 4XLFA 4OZYA 1OFEA 1KQ5A 4OZZA 4XLEA 1PLUA 1VBLA 1QRBA 2QX3A 2VFMA 2NTPA 3RIQA 2BSPA 2VBKA 1O8EA 4EW9A 1O8LA 1BHEA 4JRAC 1O8JA 3SQVA 1LM1A 4XM3A 1O8FA 1QA3A 1OFMA 1BN8A 1O8GA 1OFLA 2PECA 2YUHA 2PYHA 3NAWA 1HG8A 3VMVA 2O17A 3NB2A 4XN3A 4XLHA 2QZAA 5C1CA 3SY2A 4C2LA 2VBEA 3PSSA 1RMGA 3BH7B 1PXZA 3T9GA 1DBGA 2G0YA 4Z05A 2X85A 1QA2A 4OJLA 1EA0A 1KCCA 4XNFA 3B8YA 1O8KA 1RWRA 4MXNA 4PMHA 2PYGA 4OJ6A 1K8FA 3VMWA 4YZ0A 2BX6A 4XONA 2NTQA 1LLZA 1AIRA 2VFOA 5JLVC 1K4ZA 2XTXA 4W8QA 2Z8GA 2F3LA 1QA1A 3VSTA 2O6WA 3GQ9A 2QY1A 3ZPPA 1L1IA 4NK6A 1TSPA 1KCDA 1IDKA 4XN0A 4XOTA 4W8RA 2V5IA 2NT9A 2VJIA 4YCQA 1DABA 2O0VA 3B4NA 4XL9A 4YZXA 2XC1A 2W7ZA 1OGOX 1QQ1A 4OM9A 4YFOA 1JTAA 2QXZA 4YZAA 1H80A 1O8HA 2QYUA 4XOPA 2O1DA 3WWGA 3H09A 4HWVA 1O8MA 3EQNA 4V02C 2O04A 2INUA 3PSZA 2XTWA 4XMYA 2IQ7A 4XLCA 2UVEA 4MR0A 5AMVA 4XLAA 2J8IA 1QRCA 3GQAA 3ML3A 4URRA 2NSPA 1EE6A 4XKWA 1TYVA 2VFPA 5DNSA 1KTWA 3GRHA 4YELA 4XQFA 1X0CA 1O8DA 1O88A 3JURA 1OFDA 1TYWA
chains in the Genus database with same CATH topology
3KRGA 4I84A 4OJ5A 1OGMX 1DBOA 1PE9A 4OJOA 3EQOA 1K5CA 3GQ7A 3GQ8A 1WMRA 3ZSCA 4NK8A 1IA5A 3VSUA 2UVFA 2NT6A 1RU4A 5C1EA 2EWEA 2X6XA 4YZQA 2X3HA 3UW0A 4U49A 4XKVA 1GQ8A 3SUCA 2VJJA 1QCXA 4OJPA 2NTBA 1O8IA 2NSTA 2NZMA 2INVA 1NHCA 2O0WA 2X6YA 4XORA 1IB4A 3B90A 2VBMA 1QJVA 4YEJA 4U4BA 4W8TA 4XR6A 1XG2A 4Z06A 1IDJA 1CZFA 3VSVA 4AVZA 4W8SA 3FY3A 4Z03A 1JRGA 2ODLA 3LMWA 1OOCA 4XLFA 4OZYA 4OZZA 4XLEA 1PLUA 1VBLA 2QX3A 2NTPA 2BSPA 2VBKA 1O8EA 4EW9A 1O8LA 1BHEA 1O8JA 4XM3A 1O8FA 1OFMA 1BN8A 1O8GA 1OFLA 2PECA 3VMVA 2PYHA 1HG8A 2O17A 4XN3A 4XLHA 5C1CA 4C2LA 2VBEA 1RMGA 1PXZA 3T9GA 1DBGA 4Z05A 2X85A 4OJLA 1KCCA 4XNFA 3B8YA 1O8KA 1RWRA 4MXNA 4PMHA 2PYGA 4OJ6A 3VMWA 4YZ0A 4XONA 2NTQA 1AIRA 4W8QA 2Z8GA 3VSTA 3GQ9A 2QY1A 3ZPPA 4NK6A 1KCDA 1IDKA 4XN0A 4XOTA 4W8RA 2NT9A 2VJIA 3B4NA 2O0VA 4XL9A 4YZXA 1OGOX 1JTAA 2QXZA 4YZAA 1H80A 1O8HA 4XOPA 2O1DA 3WWGA 4HWVA 1O8MA 3EQNA 2O04A 2INUA 4XMYA 2IQ7A 4XLCA 2UVEA 4MR0A 5AMVA 4XLAA 3GQAA 4URRA 2NSPA 1EE6A 4XKWA 1KTWA 3GRHA 4YELA 4XQFA 1X0CA 1O8DA 1O88A 3JURA 2X6WA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KRG A;  4I84 A;  4OJ5 A;  1OGM X;  1DBO A;  1PE9 A;  4OJO A;  3EQO A;  1K5C A;  3GQ7 A;  3GQ8 A;  1WMR A;  3ZSC A;  4NK8 A;  1IA5 A;  3VSU A;  2UVF A;  2NT6 A;  1RU4 A;  5C1E A;  2EWE A;  2X6X A;  4YZQ A;  2X3H A;  3UW0 A;  4U49 A;  4XKV A;  1GQ8 A;  3SUC A;  2VJJ A;  1QCX A;  4OJP A;  2NTB A;  1O8I A;  2NST A;  2NZM A;  2INV A;  1NHC A;  2O0W A;  2X6Y A;  4XOR A;  1IB4 A;  3B90 A;  2VBM A;  1QJV A;  4YEJ A;  4U4B A;  4W8T A;  4XR6 A;  1XG2 A;  4Z06 A;  1IDJ A;  1CZF A;  3VSV A;  4AVZ A;  4W8S A;  3FY3 A;  4Z03 A;  1JRG A;  2ODL A;  3LMW A;  1OOC A;  4XLF A;  4OZY A;  4OZZ A;  4XLE A;  1PLU A;  1VBL A;  2QX3 A;  2NTP A;  2BSP A;  2VBK A;  1O8E A;  4EW9 A;  1O8L A;  1BHE A;  1O8J A;  4XM3 A;  1O8F A;  1OFM A;  1BN8 A;  1O8G A;  1OFL A;  2PEC A;  3VMV A;  2PYH A;  1HG8 A;  2O17 A;  4XN3 A;  4XLH A;  5C1C A;  4C2L A;  2VBE A;  1RMG A;  1PXZ A;  3T9G A;  1DBG A;  4Z05 A;  2X85 A;  4OJL A;  1KCC A;  4XNF A;  3B8Y A;  1O8K A;  1RWR A;  4MXN A;  4PMH A;  2PYG A;  4OJ6 A;  3VMW A;  4YZ0 A;  4XON A;  2NTQ A;  1AIR A;  4W8Q A;  2Z8G A;  3VST A;  3GQ9 A;  2QY1 A;  3ZPP A;  4NK6 A;  1KCD A;  1IDK A;  4XN0 A;  4XOT A;  4W8R A;  2NT9 A;  2VJI A;  3B4N A;  2O0V A;  4XL9 A;  4YZX A;  1OGO X;  1JTA A;  2QXZ A;  4YZA A;  1H80 A;  1O8H A;  4XOP A;  2O1D A;  3WWG A;  4HWV A;  1O8M A;  3EQN A;  2O04 A;  2INU A;  4XMY A;  2IQ7 A;  4XLC A;  2UVE A;  4MR0 A;  5AMV A;  4XLA A;  3GQA A;  4URR A;  2NSP A;  1EE6 A;  4XKW A;  1KTW A;  3GRH A;  4YEL A;  4XQF A;  1X0C A;  1O8D A;  1O88 A;  3JUR A;  2X6W A; 
#chains in the Genus database with same CATH topology
 3KRG A;  2X6W A;  4I84 A;  4OJ5 A;  4YEI A;  1OGM X;  1DBO A;  1PE9 A;  2B0R A;  2BM7 A;  3EQO A;  4OPW A;  4OJO A;  5JMC B;  1LLW A;  1K5C A;  3GQ7 A;  3GQ8 A;  1WMR A;  3ZSC A;  4NK8 A;  1IA5 A;  3VSU A;  2UVF A;  2NT6 A;  1RU4 A;  2BM5 A;  5C1E A;  2EWE A;  2J8K A;  2X6X A;  4KH3 A;  4YZQ A;  2X3H A;  1WXR A;  3UW0 A;  4U49 A;  3N6Z A;  4XKV A;  1GQ8 A;  1EZG A;  2VFQ A;  3SUC A;  1CLW A;  2IOU G;  2VJJ A;  3N90 A;  1QCX A;  4OJP A;  3SYJ A;  3AK5 A;  2NTB A;  2VFN A;  1O8I A;  3PET A;  2NST A;  1TYU A;  2NZM A;  2INV A;  3JX8 A;  3SZE A;  1NHC A;  2O0W A;  2X6Y A;  4XOR A;  3BH6 B;  3LJY A;  3LYC A;  3B90 A;  1IB4 A;  2XT2 A;  4YDT A;  2VBM A;  1QJV A;  4YEJ A;  4U4B A;  4W8T A;  4XR6 A;  1XG2 A;  3DU1 X;  4Z06 A;  1IDJ A;  2BM6 A;  1CZF A;  3VSV A;  4YC5 A;  4AVZ A;  2XT4 A;  4W8S A;  3FY3 A;  2BM4 A;  1JRG A;  2ODL A;  4Z03 A;  1HF2 A;  3LMW A;  3TH0 A;  1OOC A;  1TYX A;  2XTY A;  3P4G A;  4XLF A;  4OZY A;  1OFE A;  1KQ5 A;  4OZZ A;  4XLE A;  1PLU A;  1VBL A;  1QRB A;  2QX3 A;  2VFM A;  2NTP A;  3RIQ A;  2BSP A;  2VBK A;  1O8E A;  4EW9 A;  1O8L A;  1BHE A;  4JRA C;  1O8J A;  3SQV A;  1LM1 A;  4XM3 A;  1O8F A;  1QA3 A;  1OFM A;  1BN8 A;  1O8G A;  1OFL A;  2PEC A;  2YUH A;  2PYH A;  3NAW A;  1HG8 A;  3VMV A;  2O17 A;  3NB2 A;  4XN3 A;  4XLH A;  2QZA A;  5C1C A;  3SY2 A;  4C2L A;  2VBE A;  3PSS A;  1RMG A;  3BH7 B;  1PXZ A;  3T9G A;  1DBG A;  2G0Y A;  4Z05 A;  2X85 A;  1QA2 A;  4OJL A;  1EA0 A;  1KCC A;  4XNF A;  3B8Y A;  1O8K A;  1RWR A;  4MXN A;  4PMH A;  2PYG A;  4OJ6 A;  1K8F A;  3VMW A;  4YZ0 A;  2BX6 A;  4XON A;  2NTQ A;  1LLZ A;  1AIR A;  2VFO A;  5JLV C;  1K4Z A;  2XTX A;  4W8Q A;  2Z8G A;  2F3L A;  1QA1 A;  3VST A;  2O6W A;  3GQ9 A;  2QY1 A;  3ZPP A;  1L1I A;  4NK6 A;  1TSP A;  1KCD A;  1IDK A;  4XN0 A;  4XOT A;  4W8R A;  2V5I A;  2NT9 A;  2VJI A;  4YCQ A;  1DAB A;  2O0V A;  3B4N A;  4XL9 A;  4YZX A;  2XC1 A;  2W7Z A;  1OGO X;  1QQ1 A;  4OM9 A;  4YFO A;  1JTA A;  2QXZ A;  4YZA A;  1H80 A;  1O8H A;  2QYU A;  4XOP A;  2O1D A;  3WWG A;  3H09 A;  4HWV A;  1O8M A;  3EQN A;  4V02 C;  2O04 A;  2INU A;  3PSZ A;  2XTW A;  4XMY A;  2IQ7 A;  4XLC A;  2UVE A;  4MR0 A;  5AMV A;  4XLA A;  2J8I A;  1QRC A;  3GQA A;  3ML3 A;  4URR A;  2NSP A;  1EE6 A;  4XKW A;  1TYV A;  2VFP A;  5DNS A;  1KTW A;  3GRH A;  4YEL A;  4XQF A;  1X0C A;  1O8D A;  1O88 A;  3JUR A;  1OFD A;  1TYW A; 
#chains in the Genus database with same CATH homology
 3KRG A;  4I84 A;  4OJ5 A;  1OGM X;  1DBO A;  1PE9 A;  4OJO A;  3EQO A;  1K5C A;  3GQ7 A;  3GQ8 A;  1WMR A;  3ZSC A;  4NK8 A;  1IA5 A;  3VSU A;  2UVF A;  2NT6 A;  1RU4 A;  5C1E A;  2EWE A;  2X6X A;  4YZQ A;  2X3H A;  3UW0 A;  4U49 A;  4XKV A;  1GQ8 A;  3SUC A;  2VJJ A;  1QCX A;  4OJP A;  2NTB A;  1O8I A;  2NST A;  2NZM A;  2INV A;  1NHC A;  2O0W A;  2X6Y A;  4XOR A;  1IB4 A;  3B90 A;  2VBM A;  1QJV A;  4YEJ A;  4U4B A;  4W8T A;  4XR6 A;  1XG2 A;  4Z06 A;  1IDJ A;  1CZF A;  3VSV A;  4AVZ A;  4W8S A;  3FY3 A;  4Z03 A;  1JRG A;  2ODL A;  3LMW A;  1OOC A;  4XLF A;  4OZY A;  4OZZ A;  4XLE A;  1PLU A;  1VBL A;  2QX3 A;  2NTP A;  2BSP A;  2VBK A;  1O8E A;  4EW9 A;  1O8L A;  1BHE A;  1O8J A;  4XM3 A;  1O8F A;  1OFM A;  1BN8 A;  1O8G A;  1OFL A;  2PEC A;  3VMV A;  2PYH A;  1HG8 A;  2O17 A;  4XN3 A;  4XLH A;  5C1C A;  4C2L A;  2VBE A;  1RMG A;  1PXZ A;  3T9G A;  1DBG A;  4Z05 A;  2X85 A;  4OJL A;  1KCC A;  4XNF A;  3B8Y A;  1O8K A;  1RWR A;  4MXN A;  4PMH A;  2PYG A;  4OJ6 A;  3VMW A;  4YZ0 A;  4XON A;  2NTQ A;  1AIR A;  4W8Q A;  2Z8G A;  3VST A;  3GQ9 A;  2QY1 A;  3ZPP A;  4NK6 A;  1KCD A;  1IDK A;  4XN0 A;  4XOT A;  4W8R A;  2NT9 A;  2VJI A;  3B4N A;  2O0V A;  4XL9 A;  4YZX A;  1OGO X;  1JTA A;  2QXZ A;  4YZA A;  1H80 A;  1O8H A;  4XOP A;  2O1D A;  3WWG A;  4HWV A;  1O8M A;  3EQN A;  2O04 A;  2INU A;  4XMY A;  2IQ7 A;  4XLC A;  2UVE A;  4MR0 A;  5AMV A;  4XLA A;  3GQA A;  4URR A;  2NSP A;  1EE6 A;  4XKW A;  1KTW A;  3GRH A;  4YEL A;  4XQF A;  1X0C A;  1O8D A;  1O88 A;  3JUR A;  2X6W A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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