1OGOX

Dex49a from penicillium minioluteum complex with isomaltose
Total Genus 189
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
189
sequence length
572
structure length
572
Chain Sequence
TTANTHCGADFCTWWHDSGEINTQTPVQPGNVRQSHKYSVQVSLAGTNNFHDSFVYESIPRNGNGRIYAPTDPPNSNTLDSSVDDGISIEPSIGLNMAWSQFEYSHDVDVKILATDGSSLGSPSDVVIRPVSISYAISQSDDGGIVIRVPADANGRKFSVEFKTDLYTFLSDGNEYVTSGGSVVGVEPTNALVIFASPFLPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords DEXTRANASE
publication title Dextranase from Penicillium Minioluteum. Reaction Course, Crystal Structure, and Product Complex
pubmed doi rcsb
source organism Penicillium minioluteum
molecule tags Hydrolase
total genus 189
structure length 572
sequence length 572
ec nomenclature ec 3.2.1.11: Dextranase.
pdb deposition date 2003-05-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
X PF17433 Glyco_hydro_49N Glycosyl hydrolase family 49 N-terminal Ig-like domain
X PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
X PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 1ogoX01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 1ogoX02
4U4BA 1NHCA 4XONA 1EE6A 4YZXA 4HWVA 1IDKA 4XLCA 4XM3A 2EWEA 1RMGA 1VBLA 2VBKA 1AIRA 4I84A 4XLFA 4YELA 2X6WA 4XR6A 4W8TA 1BN8A 4Z05A 4XOPA 4NK8A 1H80A 1O8IA 1KTWA 3SUCA 4C2LA 2INUA 3LMWA 4OJ6A 3WWGA 2NZMA 4OJOA 3EQOA 2X85A 2Z8GA 2NTPA 2O1DA 4URRA 1O88A 1RWRA 2QXZA 2QY1A 1GQ8A 4OJ5A 4W8QA 2UVEA 1PXZA 3VMVA 2O04A 1O8GA 2UVFA 3GQ9A 1O8FA 2O0VA 2PECA 1OGMX 2NSPA 3KRGA 1K5CA 1O8MA 2NT9A 4YZ0A 1WMRA 2QX3A 2X3HA 1CZFA 4YZAA 2PYGA 3T9GA 1OFLA 3GQ7A 4OZZA 1DBOA 3UW0A 2VJIA 5C1EA 1O8HA 4XLHA 4XOTA 5AMVA 4XQFA 4NK6A 3VSUA 1BHEA 4U49A 4MXNA 1O8KA 1PLUA 1JTAA 3FY3A 2PYHA 1OOCA 1O8LA 1DBGA 3EQNA 5C1CA 3JURA 1O8EA 1QCXA 4MR0A 1IA5A 2NTBA 4PMHA 4AVZA 2INVA 4XN3A 3GQ8A 2X6YA 1RU4A 4XORA 1HG8A 2O17A 1IB4A 1O8DA 3GQAA 4XLEA 3B8YA 2NT6A 4YZQA 4YEJA 4Z06A 4XN0A 3GRHA 2NSTA 2NTQA 3ZSCA 1O8JA 3VSTA 4XL9A 2X6XA 4XKWA 4XNFA 3B4NA 1IDJA 4OJPA 4Z03A 1PE9A 4OJLA 3VMWA 2IQ7A 2O0WA 3B90A 4W8RA 2VBEA 3VSVA 4XMYA 1KCCA 4W8SA 1JRGA 1KCDA 4EW9A 2BSPA 1OFMA 2ODLA 4XLAA 1OGOX 2VJJA 4OZYA 4XKVA 1QJVA 3ZPPA 1X0CA 1XG2A 2VBMA
chains in the Genus database with same CATH superfamily
4U4BA 4YC5A 1OFEA 3ZSCA 1NHCA 2XT4A 4XONA 1EE6A 4YZXA 2VFPA 2F3LA 3SY2A 1QA1A 3RIQA 4HWVA 1IDKA 4XLCA 4XM3A 2EWEA 4YDTA 1RMGA 2BM7A 1VBLA 2VBKA 1AIRA 4I84A 4XLFA 1LM1A 1TSPA 4YELA 1QRBA 2X6WA 2BM5A 4XR6A 2QYUA 4W8TA 1CLWA 1BN8A 4YFOA 5DNSA 4Z05A 4XOPA 4NK8A 1H80A 1O8IA 2BM4A 2W7ZA 1KTWA 3SUCA 4C2LA 2INUA 3LMWA 4OJ6A 3WWGA 2NZMA 4OJOA 3EQOA 2XTXA 2VFQA 2X85A 4YEIA 2Z8GA 1WXRA 1TYUA 2NTPA 2O1DA 4URRA 1DABA 1TYVA 1O88A 3LYCA 1QQ1A 1RWRA 2QXZA 2QY1A 1GQ8A 4OJ5A 4W8QA 2UVEA 1PXZA 3VMVA 2YUHA 2O04A 1O8GA 2UVFA 3GQ9A 1O8FA 3N6ZA 4YCQA 4OM9A 4JRAC 2O0VA 2PECA 1OGMX 1OFDA 3BH6B 2NSPA 3KRGA 2VFMA 1O8MA 3NB2A 1K5CA 2NT9A 4YZ0A 5JMCB 1WMRA 2QX3A 2X3HA 1CZFA 3N90A 1L1IA 4YZAA 2PYGA 3T9GA 1OFLA 3GQ7A 2BX6A 2QZAA 1DBOA 4OZZA 3UW0A 1EZGA 2VJIA 1O8HA 4XLHA 4XOTA 5AMVA 5C1EA 4NK6A 3SYJA 3VSUA 4XQFA 2G0YA 1BHEA 4U49A 4MXNA 1O8KA 5JLVC 1PLUA 1LLWA 1JTAA 2VFOA 3FY3A 2O6WA 2VFNA 2PYHA 2BM6A 1OOCA 1O8LA 1LLZA 1DBGA 3EQNA 5C1CA 3JURA 3LJYA 1O8EA 1QCXA 4MR0A 2V5IA 1IA5A 2NTBA 4PMHA 4AVZA 1QA3A 2INVA 4XN3A 3PSZA 3GQ8A 2B0RA 1RU4A 2X6YA 3SZEA 3SQVA 4XORA 3PETA 1HG8A 3P4GA 1K4ZA 2O17A 1IB4A 1TYWA 1O8DA 3GQAA 4XLEA 3B8YA 2NT6A 4YZQA 4YEJA 2XTWA 4Z06A 3JX8A 4XN0A 2XTYA 3GRHA 2NSTA 2XT2A 2NTQA 3BH7B 1O8JA 2J8IA 4XL9A 2X6XA 4XKWA 4KH3A 4XNFA 3B4NA 3VSTA 1IDJA 4OJPA 1KQ5A 4V02C 4Z03A 2J8KA 1PE9A 3H09A 3NAWA 4OJLA 3ML3A 2IQ7A 2O0WA 3B90A 2IOUG 2VBEA 4OPWA 4W8RA 3VMWA 3VSVA 1QA2A 4XMYA 1K8FA 1QRCA 1KCCA 4W8SA 1JRGA 3PSSA 1KCDA 4EW9A 3TH0A 2BSPA 3AK5A 1OFMA 2ODLA 4XLAA 1OGOX 2VJJA 4OZYA 4XKVA 1QJVA 1HF2A 3ZPPA 1X0CA 1XG2A 1EA0A 1TYXA 3DU1X 2VBMA 2XC1A
chains in the Genus database with same CATH topology
4U4BA 1NHCA 4XONA 1EE6A 4YZXA 4HWVA 1IDKA 4XLCA 4XM3A 2EWEA 1RMGA 1VBLA 2VBKA 1AIRA 4I84A 4XLFA 4YELA 2X6WA 4XR6A 4W8TA 1BN8A 4Z05A 4XOPA 4NK8A 1H80A 1O8IA 1KTWA 3SUCA 4C2LA 2INUA 3LMWA 4OJ6A 3WWGA 2NZMA 4OJOA 3EQOA 2X85A 2Z8GA 2NTPA 2O1DA 4URRA 1O88A 1RWRA 2QXZA 2QY1A 1GQ8A 4OJ5A 4W8QA 2UVEA 1PXZA 3VMVA 2O04A 1O8GA 2UVFA 3GQ9A 1O8FA 2O0VA 2PECA 1OGMX 2NSPA 3KRGA 1K5CA 1O8MA 2NT9A 4YZ0A 1WMRA 2QX3A 2X3HA 1CZFA 4YZAA 2PYGA 3T9GA 1OFLA 3GQ7A 4OZZA 1DBOA 3UW0A 2VJIA 5C1EA 1O8HA 4XLHA 4XOTA 5AMVA 4XQFA 4NK6A 3VSUA 1BHEA 4U49A 4MXNA 1O8KA 1PLUA 1JTAA 3FY3A 2PYHA 1OOCA 1O8LA 1DBGA 3EQNA 5C1CA 3JURA 1O8EA 1QCXA 4MR0A 1IA5A 2NTBA 4PMHA 4AVZA 2INVA 4XN3A 3GQ8A 2X6YA 1RU4A 4XORA 1HG8A 2O17A 1IB4A 1O8DA 3GQAA 4XLEA 3B8YA 2NT6A 4YZQA 4YEJA 4Z06A 4XN0A 3GRHA 2NSTA 2NTQA 3ZSCA 1O8JA 3VSTA 4XL9A 2X6XA 4XKWA 4XNFA 3B4NA 1IDJA 4OJPA 4Z03A 1PE9A 4OJLA 3VMWA 2IQ7A 2O0WA 3B90A 4W8RA 2VBEA 3VSVA 4XMYA 1KCCA 4W8SA 1JRGA 1KCDA 4EW9A 2BSPA 1OFMA 2ODLA 4XLAA 1OGOX 2VJJA 4OZYA 4XKVA 1QJVA 3ZPPA 1X0CA 1XG2A 2VBMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4U4B A;  1NHC A;  4XON A;  1EE6 A;  4YZX A;  4HWV A;  1IDK A;  4XLC A;  4XM3 A;  2EWE A;  1RMG A;  1VBL A;  2VBK A;  1AIR A;  4I84 A;  4XLF A;  4YEL A;  2X6W A;  4XR6 A;  4W8T A;  1BN8 A;  4Z05 A;  4XOP A;  4NK8 A;  1H80 A;  1O8I A;  1KTW A;  3SUC A;  4C2L A;  2INU A;  3LMW A;  4OJ6 A;  3WWG A;  2NZM A;  4OJO A;  3EQO A;  2X85 A;  2Z8G A;  2NTP A;  2O1D A;  4URR A;  1O88 A;  1RWR A;  2QXZ A;  2QY1 A;  1GQ8 A;  4OJ5 A;  4W8Q A;  2UVE A;  1PXZ A;  3VMV A;  2O04 A;  1O8G A;  2UVF A;  3GQ9 A;  1O8F A;  2O0V A;  2PEC A;  1OGM X;  2NSP A;  3KRG A;  1K5C A;  1O8M A;  2NT9 A;  4YZ0 A;  1WMR A;  2QX3 A;  2X3H A;  1CZF A;  4YZA A;  2PYG A;  3T9G A;  1OFL A;  3GQ7 A;  4OZZ A;  1DBO A;  3UW0 A;  2VJI A;  5C1E A;  1O8H A;  4XLH A;  4XOT A;  5AMV A;  4XQF A;  4NK6 A;  3VSU A;  1BHE A;  4U49 A;  4MXN A;  1O8K A;  1PLU A;  1JTA A;  3FY3 A;  2PYH A;  1OOC A;  1O8L A;  1DBG A;  3EQN A;  5C1C A;  3JUR A;  1O8E A;  1QCX A;  4MR0 A;  1IA5 A;  2NTB A;  4PMH A;  4AVZ A;  2INV A;  4XN3 A;  3GQ8 A;  2X6Y A;  1RU4 A;  4XOR A;  1HG8 A;  2O17 A;  1IB4 A;  1O8D A;  3GQA A;  4XLE A;  3B8Y A;  2NT6 A;  4YZQ A;  4YEJ A;  4Z06 A;  4XN0 A;  3GRH A;  2NST A;  2NTQ A;  3ZSC A;  1O8J A;  3VST A;  4XL9 A;  2X6X A;  4XKW A;  4XNF A;  3B4N A;  1IDJ A;  4OJP A;  4Z03 A;  1PE9 A;  4OJL A;  3VMW A;  2IQ7 A;  2O0W A;  3B90 A;  4W8R A;  2VBE A;  3VSV A;  4XMY A;  1KCC A;  4W8S A;  1JRG A;  1KCD A;  4EW9 A;  2BSP A;  1OFM A;  2ODL A;  4XLA A;  1OGO X;  2VJJ A;  4OZY A;  4XKV A;  1QJV A;  3ZPP A;  1X0C A;  1XG2 A;  2VBM A; 
#chains in the Genus database with same CATH topology
 4U4B A;  4YC5 A;  1OFE A;  3ZSC A;  1NHC A;  2XT4 A;  4XON A;  1EE6 A;  4YZX A;  2VFP A;  2F3L A;  3SY2 A;  1QA1 A;  3RIQ A;  4HWV A;  1IDK A;  4XLC A;  4XM3 A;  2EWE A;  4YDT A;  1RMG A;  2BM7 A;  1VBL A;  2VBK A;  1AIR A;  4I84 A;  4XLF A;  1LM1 A;  1TSP A;  4YEL A;  1QRB A;  2X6W A;  2BM5 A;  4XR6 A;  2QYU A;  4W8T A;  1CLW A;  1BN8 A;  4YFO A;  5DNS A;  4Z05 A;  4XOP A;  4NK8 A;  1H80 A;  1O8I A;  2BM4 A;  2W7Z A;  1KTW A;  3SUC A;  4C2L A;  2INU A;  3LMW A;  4OJ6 A;  3WWG A;  2NZM A;  4OJO A;  3EQO A;  2XTX A;  2VFQ A;  2X85 A;  4YEI A;  2Z8G A;  1WXR A;  1TYU A;  2NTP A;  2O1D A;  4URR A;  1DAB A;  1TYV A;  1O88 A;  3LYC A;  1QQ1 A;  1RWR A;  2QXZ A;  2QY1 A;  1GQ8 A;  4OJ5 A;  4W8Q A;  2UVE A;  1PXZ A;  3VMV A;  2YUH A;  2O04 A;  1O8G A;  2UVF A;  3GQ9 A;  1O8F A;  3N6Z A;  4YCQ A;  4OM9 A;  4JRA C;  2O0V A;  2PEC A;  1OGM X;  1OFD A;  3BH6 B;  2NSP A;  3KRG A;  2VFM A;  1O8M A;  3NB2 A;  1K5C A;  2NT9 A;  4YZ0 A;  5JMC B;  1WMR A;  2QX3 A;  2X3H A;  1CZF A;  3N90 A;  1L1I A;  4YZA A;  2PYG A;  3T9G A;  1OFL A;  3GQ7 A;  2BX6 A;  2QZA A;  1DBO A;  4OZZ A;  3UW0 A;  1EZG A;  2VJI A;  1O8H A;  4XLH A;  4XOT A;  5AMV A;  5C1E A;  4NK6 A;  3SYJ A;  3VSU A;  4XQF A;  2G0Y A;  1BHE A;  4U49 A;  4MXN A;  1O8K A;  5JLV C;  1PLU A;  1LLW A;  1JTA A;  2VFO A;  3FY3 A;  2O6W A;  2VFN A;  2PYH A;  2BM6 A;  1OOC A;  1O8L A;  1LLZ A;  1DBG A;  3EQN A;  5C1C A;  3JUR A;  3LJY A;  1O8E A;  1QCX A;  4MR0 A;  2V5I A;  1IA5 A;  2NTB A;  4PMH A;  4AVZ A;  1QA3 A;  2INV A;  4XN3 A;  3PSZ A;  3GQ8 A;  2B0R A;  1RU4 A;  2X6Y A;  3SZE A;  3SQV A;  4XOR A;  3PET A;  1HG8 A;  3P4G A;  1K4Z A;  2O17 A;  1IB4 A;  1TYW A;  1O8D A;  3GQA A;  4XLE A;  3B8Y A;  2NT6 A;  4YZQ A;  4YEJ A;  2XTW A;  4Z06 A;  3JX8 A;  4XN0 A;  2XTY A;  3GRH A;  2NST A;  2XT2 A;  2NTQ A;  3BH7 B;  1O8J A;  2J8I A;  4XL9 A;  2X6X A;  4XKW A;  4KH3 A;  4XNF A;  3B4N A;  3VST A;  1IDJ A;  4OJP A;  1KQ5 A;  4V02 C;  4Z03 A;  2J8K A;  1PE9 A;  3H09 A;  3NAW A;  4OJL A;  3ML3 A;  2IQ7 A;  2O0W A;  3B90 A;  2IOU G;  2VBE A;  4OPW A;  4W8R A;  3VMW A;  3VSV A;  1QA2 A;  4XMY A;  1K8F A;  1QRC A;  1KCC A;  4W8S A;  1JRG A;  3PSS A;  1KCD A;  4EW9 A;  3TH0 A;  2BSP A;  3AK5 A;  1OFM A;  2ODL A;  4XLA A;  1OGO X;  2VJJ A;  4OZY A;  4XKV A;  1QJV A;  1HF2 A;  3ZPP A;  1X0C A;  1XG2 A;  1EA0 A;  1TYX A;  3DU1 X;  2VBM A;  2XC1 A; 
#chains in the Genus database with same CATH homology
 4U4B A;  1NHC A;  4XON A;  1EE6 A;  4YZX A;  4HWV A;  1IDK A;  4XLC A;  4XM3 A;  2EWE A;  1RMG A;  1VBL A;  2VBK A;  1AIR A;  4I84 A;  4XLF A;  4YEL A;  2X6W A;  4XR6 A;  4W8T A;  1BN8 A;  4Z05 A;  4XOP A;  4NK8 A;  1H80 A;  1O8I A;  1KTW A;  3SUC A;  4C2L A;  2INU A;  3LMW A;  4OJ6 A;  3WWG A;  2NZM A;  4OJO A;  3EQO A;  2X85 A;  2Z8G A;  2NTP A;  2O1D A;  4URR A;  1O88 A;  1RWR A;  2QXZ A;  2QY1 A;  1GQ8 A;  4OJ5 A;  4W8Q A;  2UVE A;  1PXZ A;  3VMV A;  2O04 A;  1O8G A;  2UVF A;  3GQ9 A;  1O8F A;  2O0V A;  2PEC A;  1OGM X;  2NSP A;  3KRG A;  1K5C A;  1O8M A;  2NT9 A;  4YZ0 A;  1WMR A;  2QX3 A;  2X3H A;  1CZF A;  4YZA A;  2PYG A;  3T9G A;  1OFL A;  3GQ7 A;  4OZZ A;  1DBO A;  3UW0 A;  2VJI A;  5C1E A;  1O8H A;  4XLH A;  4XOT A;  5AMV A;  4XQF A;  4NK6 A;  3VSU A;  1BHE A;  4U49 A;  4MXN A;  1O8K A;  1PLU A;  1JTA A;  3FY3 A;  2PYH A;  1OOC A;  1O8L A;  1DBG A;  3EQN A;  5C1C A;  3JUR A;  1O8E A;  1QCX A;  4MR0 A;  1IA5 A;  2NTB A;  4PMH A;  4AVZ A;  2INV A;  4XN3 A;  3GQ8 A;  2X6Y A;  1RU4 A;  4XOR A;  1HG8 A;  2O17 A;  1IB4 A;  1O8D A;  3GQA A;  4XLE A;  3B8Y A;  2NT6 A;  4YZQ A;  4YEJ A;  4Z06 A;  4XN0 A;  3GRH A;  2NST A;  2NTQ A;  3ZSC A;  1O8J A;  3VST A;  4XL9 A;  2X6X A;  4XKW A;  4XNF A;  3B4N A;  1IDJ A;  4OJP A;  4Z03 A;  1PE9 A;  4OJL A;  3VMW A;  2IQ7 A;  2O0W A;  3B90 A;  4W8R A;  2VBE A;  3VSV A;  4XMY A;  1KCC A;  4W8S A;  1JRG A;  1KCD A;  4EW9 A;  2BSP A;  1OFM A;  2ODL A;  4XLA A;  1OGO X;  2VJJ A;  4OZY A;  4XKV A;  1QJV A;  3ZPP A;  1X0C A;  1XG2 A;  2VBM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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