1OGOX

Dex49a from penicillium minioluteum complex with isomaltose
Total Genus 189
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
189
sequence length
572
structure length
572
Chain Sequence
TTANTHCGADFCTWWHDSGEINTQTPVQPGNVRQSHKYSVQVSLAGTNNFHDSFVYESIPRNGNGRIYAPTDPPNSNTLDSSVDDGISIEPSIGLNMAWSQFEYSHDVDVKILATDGSSLGSPSDVVIRPVSISYAISQSDDGGIVIRVPADANGRKFSVEFKTDLYTFLSDGNEYVTSGGSVVGVEPTNALVIFASPFLPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords DEXTRANASE
publication title Dextranase from Penicillium Minioluteum. Reaction Course, Crystal Structure, and Product Complex
pubmed doi rcsb
source organism Penicillium minioluteum
total genus 189
structure length 572
sequence length 572
ec nomenclature ec 3.2.1.11: Dextranase.
pdb deposition date 2003-05-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
X PF17433 Glyco_hydro_49N Glycosyl hydrolase family 49 N-terminal Ig-like domain
X PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
X PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 1ogoX01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 1ogoX02
4I84A 4XOPA 3ZPPA 4EW9A 2BSPA 2ODLA 4HWVA 2NTQA 1DBOA 2VBEA 2QY1A 1QCXA 2INUA 1PXZA 2NSTA 1WMRA 2NTPA 4XORA 4Z05A 3EQOA 2NT9A 4NK8A 1O8JA 4XOTA 4YZ0A 1O8KA 1GQ8A 2X6XA 5AMVA 4OJOA 1HG8A 1O8IA 4W8RA 4YELA 1IDKA 4W8SA 3FY3A 4PMHA 2O04A 1OGOX 1PE9A 1O8FA 2VJJA 4XLFA 4XL9A 1K5CA 2NTBA 2VBKA 3VMVA 1KCCA 1O8DA 3GQ9A 2EWEA 1JTAA 1OOCA 4XLEA 3LMWA 3GRHA 1QJVA 1BN8A 4XN3A 4Z06A 2NSPA 3WWGA 3GQ8A 2PYHA 4XLAA 1CZFA 1RMGA 1NHCA 3VMWA 4OJPA 4XLCA 2X85A 4YZAA 3B90A 1IB4A 1EE6A 4XKWA 5C1EA 1O8LA 3VSTA 1OGMX 1DBGA 4XONA 4C2LA 4MR0A 2NT6A 1IDJA 4YZQA 4YZXA 2O0WA 3ZSCA 4U4BA 4OJLA 4NK6A 4XQFA 2INVA 4XLHA 4U49A 4OZZA 1KTWA 2X6YA 3T9GA 2O17A 3KRGA 3VSUA 1X0CA 2UVEA 1RU4A 1OFLA 1PLUA 2VBMA 3VSVA 4OZYA 3GQAA 2QXZA 3B4NA 4MXNA 1IA5A 1O8GA 4XN0A 4URRA 4W8QA 1O8EA 4W8TA 4AVZA 4OJ5A 1RWRA 4Z03A 1BHEA 5C1CA 1AIRA 1O8HA 2IQ7A 3GQ7A 1KCDA 2PYGA 1O8MA 2QX3A 3EQNA 1VBLA 1H80A 1O88A 2Z8GA 4XM3A 1JRGA 3UW0A 2O0VA 2NZMA 2X6WA 3SUCA 2O1DA 4OJ6A 2VJIA 4XKVA 4XMYA 2PECA 2X3HA 4XR6A 3B8YA 1OFMA 1XG2A 3JURA 4YEJA 2UVFA 4XNFA
chains in the Genus database with same CATH superfamily
3P4GA 4I84A 4XOPA 3ZPPA 1DABA 4EW9A 2BSPA 2XT4A 2ODLA 4HWVA 2NTQA 3LJYA 1DBOA 4JRAC 2VBEA 2QY1A 3PSSA 2O6WA 1QCXA 4YEIA 2INUA 2VFOA 1PXZA 2NSTA 1WMRA 2NTPA 4XORA 4Z05A 3SY2A 3EQOA 2NT9A 4NK8A 1O8JA 2VFMA 5DNSA 1QRCA 4XOTA 4YZ0A 1O8KA 1GQ8A 2F3LA 2X6XA 5AMVA 4OJOA 1HG8A 1O8IA 2BX6A 4W8RA 4YELA 1IDKA 4W8SA 3FY3A 4PMHA 2O04A 1OGOX 1PE9A 1EA0A 4OPWA 1O8FA 2VJJA 3NAWA 4XLFA 4XL9A 1K5CA 1QRBA 2NTBA 2VBKA 3VMVA 3BH7B 1O8DA 2XC1A 3SZEA 3GQ9A 1KCCA 2EWEA 1JTAA 1OOCA 1OFDA 2YUHA 4YFOA 2B0RA 1LLZA 4XLEA 3LMWA 4YC5A 3GRHA 1QA1A 1QJVA 2XTWA 1BN8A 1L1IA 4XN3A 4Z06A 2NSPA 4YCQA 1LM1A 3WWGA 2BM5A 3GQ8A 4YDTA 1EZGA 1LLWA 3N6ZA 1TYUA 3PETA 2PYHA 2VFPA 4XLAA 1CZFA 1RMGA 1QA3A 1NHCA 3VMWA 4OJPA 1TYWA 4XLCA 2X85A 3NB2A 3N90A 3B90A 4YZAA 1IB4A 1EE6A 2IOUG 4XKWA 5C1EA 1WXRA 1O8LA 2BM7A 3VSTA 1OGMX 1DBGA 4XONA 4C2LA 4V02C 2VFNA 4MR0A 2NT6A 1IDJA 4YZQA 4YZXA 2O0WA 3ZSCA 2BM4A 4U4BA 4OJLA 4NK6A 4XQFA 5JLVC 2INVA 4XLHA 4U49A 4OZZA 2QYUA 1OFEA 1KTWA 3H09A 2X6YA 3ML3A 3T9GA 3SYJA 3AK5A 2O17A 3KRGA 1HF2A 2W7ZA 3JURA 3VSUA 1X0CA 2UVEA 3JX8A 1QA2A 1RU4A 1OFLA 1PLUA 2VBMA 3VSVA 2XTYA 4OZYA 1QQ1A 3DU1X 3GQAA 1K4ZA 2QXZA 3B4NA 4MXNA 4OM9A 1IA5A 1O8GA 4XN0A 2QZAA 4URRA 4W8QA 1O8EA 2V5IA 4W8TA 3TH0A 4AVZA 5JMCB 4OJ5A 2XT2A 4KH3A 1RWRA 4Z03A 1BHEA 5C1CA 1AIRA 1O8HA 2IQ7A 3GQ7A 1KCDA 2PYGA 2XTXA 1O8MA 2QX3A 1TYXA 3BH6B 3EQNA 1VBLA 1TSPA 2VFQA 1H80A 1O88A 3LYCA 2Z8GA 2BM6A 1JRGA 4XM3A 3UW0A 2O0VA 2G0YA 2NZMA 2X6WA 3SQVA 3SUCA 2O1DA 4OJ6A 1CLWA 2VJIA 4XKVA 2J8KA 1TYVA 4XMYA 2PECA 2X3HA 3RIQA 4XR6A 3B8YA 1OFMA 3PSZA 1KQ5A 2J8IA 1XG2A 1K8FA 4YEJA 2UVFA 4XNFA
chains in the Genus database with same CATH topology
4I84A 4XOPA 3ZPPA 4EW9A 2BSPA 2ODLA 4HWVA 2NTQA 1DBOA 2VBEA 2QY1A 1QCXA 2INUA 1PXZA 2NSTA 1WMRA 2NTPA 4XORA 4Z05A 3EQOA 2NT9A 4NK8A 1O8JA 4XOTA 4YZ0A 1O8KA 1GQ8A 2X6XA 5AMVA 4OJOA 1HG8A 1O8IA 4W8RA 4YELA 1IDKA 4W8SA 3FY3A 4PMHA 2O04A 1OGOX 1PE9A 1O8FA 2VJJA 4XLFA 4XL9A 1K5CA 2NTBA 2VBKA 3VMVA 1KCCA 1O8DA 3GQ9A 2EWEA 1JTAA 1OOCA 4XLEA 3LMWA 3GRHA 1QJVA 1BN8A 4XN3A 4Z06A 2NSPA 3WWGA 3GQ8A 2PYHA 4XLAA 1CZFA 1RMGA 1NHCA 3VMWA 4OJPA 4XLCA 2X85A 4YZAA 3B90A 1IB4A 1EE6A 4XKWA 5C1EA 1O8LA 3VSTA 1OGMX 1DBGA 4XONA 4C2LA 4MR0A 2NT6A 1IDJA 4YZQA 4YZXA 2O0WA 3ZSCA 4U4BA 4OJLA 4NK6A 4XQFA 2INVA 4XLHA 4U49A 4OZZA 1KTWA 2X6YA 3T9GA 2O17A 3KRGA 3VSUA 1X0CA 2UVEA 1RU4A 1OFLA 1PLUA 2VBMA 3VSVA 4OZYA 3GQAA 2QXZA 3B4NA 4MXNA 1IA5A 1O8GA 4XN0A 4URRA 4W8QA 1O8EA 4W8TA 4AVZA 4OJ5A 1RWRA 4Z03A 1BHEA 5C1CA 1AIRA 1O8HA 2IQ7A 3GQ7A 1KCDA 2PYGA 1O8MA 2QX3A 3EQNA 1VBLA 1H80A 1O88A 2Z8GA 4XM3A 1JRGA 3UW0A 2O0VA 2NZMA 2X6WA 3SUCA 2O1DA 4OJ6A 2VJIA 4XKVA 4XMYA 2PECA 2X3HA 4XR6A 3B8YA 1OFMA 1XG2A 3JURA 4YEJA 2UVFA 4XNFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4I84 A;  4XOP A;  3ZPP A;  4EW9 A;  2BSP A;  2ODL A;  4HWV A;  2NTQ A;  1DBO A;  2VBE A;  2QY1 A;  1QCX A;  2INU A;  1PXZ A;  2NST A;  1WMR A;  2NTP A;  4XOR A;  4Z05 A;  3EQO A;  2NT9 A;  4NK8 A;  1O8J A;  4XOT A;  4YZ0 A;  1O8K A;  1GQ8 A;  2X6X A;  5AMV A;  4OJO A;  1HG8 A;  1O8I A;  4W8R A;  4YEL A;  1IDK A;  4W8S A;  3FY3 A;  4PMH A;  2O04 A;  1OGO X;  1PE9 A;  1O8F A;  2VJJ A;  4XLF A;  4XL9 A;  1K5C A;  2NTB A;  2VBK A;  3VMV A;  1KCC A;  1O8D A;  3GQ9 A;  2EWE A;  1JTA A;  1OOC A;  4XLE A;  3LMW A;  3GRH A;  1QJV A;  1BN8 A;  4XN3 A;  4Z06 A;  2NSP A;  3WWG A;  3GQ8 A;  2PYH A;  4XLA A;  1CZF A;  1RMG A;  1NHC A;  3VMW A;  4OJP A;  4XLC A;  2X85 A;  4YZA A;  3B90 A;  1IB4 A;  1EE6 A;  4XKW A;  5C1E A;  1O8L A;  3VST A;  1OGM X;  1DBG A;  4XON A;  4C2L A;  4MR0 A;  2NT6 A;  1IDJ A;  4YZQ A;  4YZX A;  2O0W A;  3ZSC A;  4U4B A;  4OJL A;  4NK6 A;  4XQF A;  2INV A;  4XLH A;  4U49 A;  4OZZ A;  1KTW A;  2X6Y A;  3T9G A;  2O17 A;  3KRG A;  3VSU A;  1X0C A;  2UVE A;  1RU4 A;  1OFL A;  1PLU A;  2VBM A;  3VSV A;  4OZY A;  3GQA A;  2QXZ A;  3B4N A;  4MXN A;  1IA5 A;  1O8G A;  4XN0 A;  4URR A;  4W8Q A;  1O8E A;  4W8T A;  4AVZ A;  4OJ5 A;  1RWR A;  4Z03 A;  1BHE A;  5C1C A;  1AIR A;  1O8H A;  2IQ7 A;  3GQ7 A;  1KCD A;  2PYG A;  1O8M A;  2QX3 A;  3EQN A;  1VBL A;  1H80 A;  1O88 A;  2Z8G A;  4XM3 A;  1JRG A;  3UW0 A;  2O0V A;  2NZM A;  2X6W A;  3SUC A;  2O1D A;  4OJ6 A;  2VJI A;  4XKV A;  4XMY A;  2PEC A;  2X3H A;  4XR6 A;  3B8Y A;  1OFM A;  1XG2 A;  3JUR A;  4YEJ A;  2UVF A;  4XNF A; 
#chains in the Genus database with same CATH topology
 3P4G A;  4I84 A;  4XOP A;  3ZPP A;  1DAB A;  4EW9 A;  2BSP A;  2XT4 A;  2ODL A;  4HWV A;  2NTQ A;  3LJY A;  1DBO A;  4JRA C;  2VBE A;  2QY1 A;  3PSS A;  2O6W A;  1QCX A;  4YEI A;  2INU A;  2VFO A;  1PXZ A;  2NST A;  1WMR A;  2NTP A;  4XOR A;  4Z05 A;  3SY2 A;  3EQO A;  2NT9 A;  4NK8 A;  1O8J A;  2VFM A;  5DNS A;  1QRC A;  4XOT A;  4YZ0 A;  1O8K A;  1GQ8 A;  2F3L A;  2X6X A;  5AMV A;  4OJO A;  1HG8 A;  1O8I A;  2BX6 A;  4W8R A;  4YEL A;  1IDK A;  4W8S A;  3FY3 A;  4PMH A;  2O04 A;  1OGO X;  1PE9 A;  1EA0 A;  4OPW A;  1O8F A;  2VJJ A;  3NAW A;  4XLF A;  4XL9 A;  1K5C A;  1QRB A;  2NTB A;  2VBK A;  3VMV A;  3BH7 B;  1O8D A;  2XC1 A;  3SZE A;  3GQ9 A;  1KCC A;  2EWE A;  1JTA A;  1OOC A;  1OFD A;  2YUH A;  4YFO A;  2B0R A;  1LLZ A;  4XLE A;  3LMW A;  4YC5 A;  3GRH A;  1QA1 A;  1QJV A;  2XTW A;  1BN8 A;  1L1I A;  4XN3 A;  4Z06 A;  2NSP A;  4YCQ A;  1LM1 A;  3WWG A;  2BM5 A;  3GQ8 A;  4YDT A;  1EZG A;  1LLW A;  3N6Z A;  1TYU A;  3PET A;  2PYH A;  2VFP A;  4XLA A;  1CZF A;  1RMG A;  1QA3 A;  1NHC A;  3VMW A;  4OJP A;  1TYW A;  4XLC A;  2X85 A;  3NB2 A;  3N90 A;  3B90 A;  4YZA A;  1IB4 A;  1EE6 A;  2IOU G;  4XKW A;  5C1E A;  1WXR A;  1O8L A;  2BM7 A;  3VST A;  1OGM X;  1DBG A;  4XON A;  4C2L A;  4V02 C;  2VFN A;  4MR0 A;  2NT6 A;  1IDJ A;  4YZQ A;  4YZX A;  2O0W A;  3ZSC A;  2BM4 A;  4U4B A;  4OJL A;  4NK6 A;  4XQF A;  5JLV C;  2INV A;  4XLH A;  4U49 A;  4OZZ A;  2QYU A;  1OFE A;  1KTW A;  3H09 A;  2X6Y A;  3ML3 A;  3T9G A;  3SYJ A;  3AK5 A;  2O17 A;  3KRG A;  1HF2 A;  2W7Z A;  3JUR A;  3VSU A;  1X0C A;  2UVE A;  3JX8 A;  1QA2 A;  1RU4 A;  1OFL A;  1PLU A;  2VBM A;  3VSV A;  2XTY A;  4OZY A;  1QQ1 A;  3DU1 X;  3GQA A;  1K4Z A;  2QXZ A;  3B4N A;  4MXN A;  4OM9 A;  1IA5 A;  1O8G A;  4XN0 A;  2QZA A;  4URR A;  4W8Q A;  1O8E A;  2V5I A;  4W8T A;  3TH0 A;  4AVZ A;  5JMC B;  4OJ5 A;  2XT2 A;  4KH3 A;  1RWR A;  4Z03 A;  1BHE A;  5C1C A;  1AIR A;  1O8H A;  2IQ7 A;  3GQ7 A;  1KCD A;  2PYG A;  2XTX A;  1O8M A;  2QX3 A;  1TYX A;  3BH6 B;  3EQN A;  1VBL A;  1TSP A;  2VFQ A;  1H80 A;  1O88 A;  3LYC A;  2Z8G A;  2BM6 A;  1JRG A;  4XM3 A;  3UW0 A;  2O0V A;  2G0Y A;  2NZM A;  2X6W A;  3SQV A;  3SUC A;  2O1D A;  4OJ6 A;  1CLW A;  2VJI A;  4XKV A;  2J8K A;  1TYV A;  4XMY A;  2PEC A;  2X3H A;  3RIQ A;  4XR6 A;  3B8Y A;  1OFM A;  3PSZ A;  1KQ5 A;  2J8I A;  1XG2 A;  1K8F A;  4YEJ A;  2UVF A;  4XNF A; 
#chains in the Genus database with same CATH homology
 4I84 A;  4XOP A;  3ZPP A;  4EW9 A;  2BSP A;  2ODL A;  4HWV A;  2NTQ A;  1DBO A;  2VBE A;  2QY1 A;  1QCX A;  2INU A;  1PXZ A;  2NST A;  1WMR A;  2NTP A;  4XOR A;  4Z05 A;  3EQO A;  2NT9 A;  4NK8 A;  1O8J A;  4XOT A;  4YZ0 A;  1O8K A;  1GQ8 A;  2X6X A;  5AMV A;  4OJO A;  1HG8 A;  1O8I A;  4W8R A;  4YEL A;  1IDK A;  4W8S A;  3FY3 A;  4PMH A;  2O04 A;  1OGO X;  1PE9 A;  1O8F A;  2VJJ A;  4XLF A;  4XL9 A;  1K5C A;  2NTB A;  2VBK A;  3VMV A;  1KCC A;  1O8D A;  3GQ9 A;  2EWE A;  1JTA A;  1OOC A;  4XLE A;  3LMW A;  3GRH A;  1QJV A;  1BN8 A;  4XN3 A;  4Z06 A;  2NSP A;  3WWG A;  3GQ8 A;  2PYH A;  4XLA A;  1CZF A;  1RMG A;  1NHC A;  3VMW A;  4OJP A;  4XLC A;  2X85 A;  4YZA A;  3B90 A;  1IB4 A;  1EE6 A;  4XKW A;  5C1E A;  1O8L A;  3VST A;  1OGM X;  1DBG A;  4XON A;  4C2L A;  4MR0 A;  2NT6 A;  1IDJ A;  4YZQ A;  4YZX A;  2O0W A;  3ZSC A;  4U4B A;  4OJL A;  4NK6 A;  4XQF A;  2INV A;  4XLH A;  4U49 A;  4OZZ A;  1KTW A;  2X6Y A;  3T9G A;  2O17 A;  3KRG A;  3VSU A;  1X0C A;  2UVE A;  1RU4 A;  1OFL A;  1PLU A;  2VBM A;  3VSV A;  4OZY A;  3GQA A;  2QXZ A;  3B4N A;  4MXN A;  1IA5 A;  1O8G A;  4XN0 A;  4URR A;  4W8Q A;  1O8E A;  4W8T A;  4AVZ A;  4OJ5 A;  1RWR A;  4Z03 A;  1BHE A;  5C1C A;  1AIR A;  1O8H A;  2IQ7 A;  3GQ7 A;  1KCD A;  2PYG A;  1O8M A;  2QX3 A;  3EQN A;  1VBL A;  1H80 A;  1O88 A;  2Z8G A;  4XM3 A;  1JRG A;  3UW0 A;  2O0V A;  2NZM A;  2X6W A;  3SUC A;  2O1D A;  4OJ6 A;  2VJI A;  4XKV A;  4XMY A;  2PEC A;  2X3H A;  4XR6 A;  3B8Y A;  1OFM A;  1XG2 A;  3JUR A;  4YEJ A;  2UVF A;  4XNF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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