3EQOA

Crystal structure of beta-1,3-glucanase from phanerochaete chrysosporium (lam55a) gluconolactone complex
Total Genus 294
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
294
sequence length
752
structure length
752
Chain Sequence
b'LGSTCSSPLTHGSAAPGDPFWLQNIQHQGIAAFNGNPGGYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTLLAAPNFSGIALIDADPYLAGGAQYYVNQNNFFRSVRNFVIDLRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGNQQFTVRNLTFNNANTAINAIWNWGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWSGASSGHLQGSLVLNNIQLTNVPVAVGVKGGPTVLAGGTTTINSWAQGNVYHGTNGNPTFTQGNIANINRPGVLLDSTGRIVSKSHPQYTGYAPSDFVSVRSQGAKGDGHTDDTQAIKNVFAKYAGCKIIFFDAGTYIVTDTIQIPAGTQIVGEVWSVIMGTGSKFTDYNNPQPVIQVGAPGSSGVVEITDMIFTTRGPAAGAIIVEWNVHDPSGQQAAAGAWDTHLIIGGTAQSGLQVGQCPTSGAGGNNCFADFLGLHLTSGSSAYLEGMWVWLADHDLDSGGSQQISLWSNGGIMSESQGPVWLIGTASEHHINYQYFLKNAANHYIGLAQTETPYFQPNPNPPAPFITNSNFDPSQLGQGDAWAMTVQNSHGILVFGAGFYSFFSAYNTGCQSPQNCQNQIVNVDSSSDIAFYSLTTVDTTWQFSVNAQGVINRSNNPNGFADTITAWTRN'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Glucan 1,3-beta-glucosidase
publication title Crystal structure of glycoside hydrolase family 55 beta -1,3-glucanase from the basidiomycete Phanerochaete chrysosporium
pubmed doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 294
structure length 752
sequence length 752
chains with identical sequence B
ec nomenclature ec 3.2.1.58: Glucan 1,3-beta-glucosidase.
pdb deposition date 2008-10-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12708 Pectate_lyase_3 Pectate lyase superfamily protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3eqoA02
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3eqoA01
3JURA 3VSVA 4XKVA 2PYGA 4Z06A 2IQ7A 4AVZA 4XN3A 2VBEA 1K5CA 4OJLA 1O8LA 3LMWA 4XLFA 4EW9A 4XQFA 4MR0A 4NK6A 1O8IA 1VBLA 2VJIA 1O8HA 1PLUA 4XOTA 4XM3A 1H80A 4OJ6A 4W8RA 2X3HA 4MXNA 3UW0A 1JRGA 3B4NA 3GQ8A 4YZXA 1WMRA 2NZMA 1DBOA 4OJPA 2QY1A 4NK8A 1OGOX 1OGMX 2X6WA 1BN8A 1AIRA 2PECA 3EQNA 1OFMA 1IDKA 4XOPA 1KTWA 1HG8A 4YZAA 2O0WA 1O8MA 2PYHA 4XLCA 1O8KA 4XMYA 1JTAA 4YELA 2O1DA 4OZYA 3B8YA 1O8FA 3WWGA 3KRGA 4Z05A 1O8JA 3VMVA 1GQ8A 1RU4A 3FY3A 1XG2A 4PMHA 3ZPPA 2X6XA 4W8SA 3T9GA 3B90A 2INUA 1IDJA 2X85A 4OJ5A 4YZQA 4Z03A 2NT9A 1O88A 2O17A 1EE6A 1OOCA 4URRA 2NT6A 4XLHA 3SUCA 2QXZA 3GQ9A 2UVEA 2NSTA 4XONA 2NSPA 2VBMA 1BHEA 1DBGA 1QJVA 2BSPA 2INVA 3VSUA 4C2LA 1PE9A 4HWVA 4XNFA 1NHCA 2O0VA 4XKWA 5C1CA 4YEJA 4OJOA 3GQAA 2UVFA 4XL9A 2NTQA 2Z8GA 3GQ7A 3VSTA 1O8GA 2X6YA 1KCDA 1O8DA 2O04A 4XORA 4I84A 2ODLA 5AMVA 1OFLA 1IB4A 1RMGA 3ZSCA 4YZ0A 2VBKA 1O8EA 3EQOA 2QX3A 4W8QA 1KCCA 5C1EA 4XLAA 4XR6A 1QCXA 2VJJA 1IA5A 2NTBA 3GRHA 4XN0A 1X0CA 1RWRA 4XLEA 3VMWA 2EWEA 4U4BA 1PXZA 2NTPA 4U49A 1CZFA 4OZZA 4W8TA
chains in the Genus database with same CATH superfamily
3JURA 5JLVC 1LM1A 3VSVA 4XKVA 2PYGA 3LYCA 4OM9A 4Z06A 2IQ7A 2G0YA 4XN3A 2VBEA 4AVZA 3SQVA 4OJLA 1K5CA 1O8LA 3LMWA 3P4GA 4XLFA 4EW9A 4MR0A 4NK6A 4XQFA 1QA2A 1O8IA 3BH7B 1EZGA 3PSZA 1VBLA 2VJIA 1O8HA 1PLUA 1OFEA 1TYWA 4XOTA 1H80A 4OJ6A 4W8RA 4XM3A 1K8FA 2X3HA 4MXNA 3UW0A 1JRGA 3B4NA 3LJYA 3GQ8A 4YZXA 1EA0A 3TH0A 1WMRA 2NZMA 1DBOA 1CLWA 2VFQA 4OJPA 2QY1A 4NK8A 1OGOX 1OGMX 2VFPA 2V5IA 2X6WA 1BN8A 2XTXA 2B0RA 4YCQA 1AIRA 3NB2A 2XT2A 2O6WA 3PSSA 2PECA 3EQNA 1OFMA 2VFNA 1IDKA 1LLWA 1KTWA 1HG8A 2J8KA 4XOPA 2O0WA 4YZAA 3H09A 1QA1A 1O8MA 2PYHA 4XLCA 1O8KA 4XMYA 1JTAA 4YELA 2O1DA 1QRBA 3AK5A 4OZYA 2XTYA 3SZEA 3B8YA 3DU1X 1O8FA 3N90A 3WWGA 2J8IA 3KRGA 4Z05A 1O8JA 3VMVA 1GQ8A 1RU4A 3FY3A 4OPWA 1XG2A 4PMHA 3ZPPA 1QRCA 2X6XA 4W8SA 3T9GA 1OFDA 2QYUA 1KQ5A 4YEIA 1DABA 3B90A 2INUA 1IDJA 2X85A 4OJ5A 4YZQA 1TYXA 4Z03A 5JMCB 4YFOA 2NT9A 1O88A 2O17A 1EE6A 1OOCA 4URRA 2NT6A 4XLHA 3SUCA 4JRAC 4YC5A 2QXZA 3GQ9A 2UVEA 1LLZA 2XT4A 3SYJA 2NSTA 4XONA 2NSPA 2VBMA 1QQ1A 1BHEA 2VFOA 2BM5A 1DBGA 1QJVA 1TYUA 3JX8A 2BSPA 2INVA 3RIQA 4V02C 1HF2A 4YDTA 3VSUA 4C2LA 1PE9A 4HWVA 4XNFA 1NHCA 2O0VA 4XKWA 5C1CA 4YEJA 4KH3A 4OJOA 3NAWA 1K4ZA 3GQAA 2UVFA 4XL9A 2NTQA 2BM4A 1L1IA 2BX6A 2Z8GA 2IOUG 3GQ7A 3VSTA 1O8GA 2X6YA 1KCDA 1O8DA 2O04A 4XORA 2QZAA 4I84A 2ODLA 5AMVA 1OFLA 1IB4A 3SY2A 1TYVA 1RMGA 3ZSCA 4YZ0A 2VBKA 1O8EA 2XC1A 3EQOA 2XTWA 2QX3A 1TSPA 4W8QA 1KCCA 5C1EA 4XLAA 5DNSA 3BH6B 4XR6A 1QCXA 2W7ZA 2VJJA 1IA5A 2NTBA 1QA3A 2BM6A 3ML3A 2BM7A 3PETA 3GRHA 2F3LA 1X0CA 1RWRA 4XLEA 4XN0A 2EWEA 2YUHA 4U4BA 1PXZA 3VMWA 2NTPA 4U49A 3N6ZA 1WXRA 1CZFA 4OZZA 4W8TA 2VFMA
chains in the Genus database with same CATH topology
3JURA 3VSVA 4XKVA 2PYGA 4Z06A 2IQ7A 4AVZA 4XN3A 2VBEA 1K5CA 4OJLA 1O8LA 3LMWA 4XLFA 4EW9A 4XQFA 4MR0A 4NK6A 1O8IA 1VBLA 2VJIA 1O8HA 1PLUA 4XOTA 4XM3A 1H80A 4OJ6A 4W8RA 2X3HA 4MXNA 3UW0A 1JRGA 3B4NA 3GQ8A 4YZXA 1WMRA 2NZMA 1DBOA 4OJPA 2QY1A 4NK8A 1OGOX 1OGMX 2X6WA 1BN8A 1AIRA 2PECA 3EQNA 1OFMA 1IDKA 4XOPA 1KTWA 1HG8A 4YZAA 2O0WA 1O8MA 2PYHA 4XLCA 1O8KA 4XMYA 1JTAA 4YELA 2O1DA 4OZYA 3B8YA 1O8FA 3WWGA 3KRGA 4Z05A 1O8JA 3VMVA 1GQ8A 1RU4A 3FY3A 1XG2A 4PMHA 3ZPPA 2X6XA 4W8SA 3T9GA 3B90A 2INUA 1IDJA 2X85A 4OJ5A 4YZQA 4Z03A 2NT9A 1O88A 2O17A 1EE6A 1OOCA 4URRA 2NT6A 4XLHA 3SUCA 2QXZA 3GQ9A 2UVEA 2NSTA 4XONA 2NSPA 2VBMA 1BHEA 1DBGA 1QJVA 2BSPA 2INVA 3VSUA 4C2LA 1PE9A 4HWVA 4XNFA 1NHCA 2O0VA 4XKWA 5C1CA 4YEJA 4OJOA 3GQAA 2UVFA 4XL9A 2NTQA 2Z8GA 3GQ7A 3VSTA 1O8GA 2X6YA 1KCDA 1O8DA 2O04A 4XORA 4I84A 2ODLA 5AMVA 1OFLA 1IB4A 1RMGA 3ZSCA 4YZ0A 2VBKA 1O8EA 3EQOA 2QX3A 4W8QA 1KCCA 5C1EA 4XLAA 4XR6A 1QCXA 2VJJA 1IA5A 2NTBA 3GRHA 4XN0A 1X0CA 1RWRA 4XLEA 3VMWA 2EWEA 4U4BA 1PXZA 2NTPA 4U49A 1CZFA 4OZZA 4W8TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3JUR A;  3VSV A;  4XKV A;  2PYG A;  4Z06 A;  2IQ7 A;  4AVZ A;  4XN3 A;  2VBE A;  1K5C A;  4OJL A;  1O8L A;  3LMW A;  4XLF A;  4EW9 A;  4XQF A;  4MR0 A;  4NK6 A;  1O8I A;  1VBL A;  2VJI A;  1O8H A;  1PLU A;  4XOT A;  4XM3 A;  1H80 A;  4OJ6 A;  4W8R A;  2X3H A;  4MXN A;  3UW0 A;  1JRG A;  3B4N A;  3GQ8 A;  4YZX A;  1WMR A;  2NZM A;  1DBO A;  4OJP A;  2QY1 A;  4NK8 A;  1OGO X;  1OGM X;  2X6W A;  1BN8 A;  1AIR A;  2PEC A;  3EQN A;  1OFM A;  1IDK A;  4XOP A;  1KTW A;  1HG8 A;  4YZA A;  2O0W A;  1O8M A;  2PYH A;  4XLC A;  1O8K A;  4XMY A;  1JTA A;  4YEL A;  2O1D A;  4OZY A;  3B8Y A;  1O8F A;  3WWG A;  3KRG A;  4Z05 A;  1O8J A;  3VMV A;  1GQ8 A;  1RU4 A;  3FY3 A;  1XG2 A;  4PMH A;  3ZPP A;  2X6X A;  4W8S A;  3T9G A;  3B90 A;  2INU A;  1IDJ A;  2X85 A;  4OJ5 A;  4YZQ A;  4Z03 A;  2NT9 A;  1O88 A;  2O17 A;  1EE6 A;  1OOC A;  4URR A;  2NT6 A;  4XLH A;  3SUC A;  2QXZ A;  3GQ9 A;  2UVE A;  2NST A;  4XON A;  2NSP A;  2VBM A;  1BHE A;  1DBG A;  1QJV A;  2BSP A;  2INV A;  3VSU A;  4C2L A;  1PE9 A;  4HWV A;  4XNF A;  1NHC A;  2O0V A;  4XKW A;  5C1C A;  4YEJ A;  4OJO A;  3GQA A;  2UVF A;  4XL9 A;  2NTQ A;  2Z8G A;  3GQ7 A;  3VST A;  1O8G A;  2X6Y A;  1KCD A;  1O8D A;  2O04 A;  4XOR A;  4I84 A;  2ODL A;  5AMV A;  1OFL A;  1IB4 A;  1RMG A;  3ZSC A;  4YZ0 A;  2VBK A;  1O8E A;  3EQO A;  2QX3 A;  4W8Q A;  1KCC A;  5C1E A;  4XLA A;  4XR6 A;  1QCX A;  2VJJ A;  1IA5 A;  2NTB A;  3GRH A;  4XN0 A;  1X0C A;  1RWR A;  4XLE A;  3VMW A;  2EWE A;  4U4B A;  1PXZ A;  2NTP A;  4U49 A;  1CZF A;  4OZZ A;  4W8T A; 
#chains in the Genus database with same CATH topology
 3JUR A;  5JLV C;  1LM1 A;  3VSV A;  4XKV A;  2PYG A;  3LYC A;  4OM9 A;  4Z06 A;  2IQ7 A;  2G0Y A;  4XN3 A;  2VBE A;  4AVZ A;  3SQV A;  4OJL A;  1K5C A;  1O8L A;  3LMW A;  3P4G A;  4XLF A;  4EW9 A;  4MR0 A;  4NK6 A;  4XQF A;  1QA2 A;  1O8I A;  3BH7 B;  1EZG A;  3PSZ A;  1VBL A;  2VJI A;  1O8H A;  1PLU A;  1OFE A;  1TYW A;  4XOT A;  1H80 A;  4OJ6 A;  4W8R A;  4XM3 A;  1K8F A;  2X3H A;  4MXN A;  3UW0 A;  1JRG A;  3B4N A;  3LJY A;  3GQ8 A;  4YZX A;  1EA0 A;  3TH0 A;  1WMR A;  2NZM A;  1DBO A;  1CLW A;  2VFQ A;  4OJP A;  2QY1 A;  4NK8 A;  1OGO X;  1OGM X;  2VFP A;  2V5I A;  2X6W A;  1BN8 A;  2XTX A;  2B0R A;  4YCQ A;  1AIR A;  3NB2 A;  2XT2 A;  2O6W A;  3PSS A;  2PEC A;  3EQN A;  1OFM A;  2VFN A;  1IDK A;  1LLW A;  1KTW A;  1HG8 A;  2J8K A;  4XOP A;  2O0W A;  4YZA A;  3H09 A;  1QA1 A;  1O8M A;  2PYH A;  4XLC A;  1O8K A;  4XMY A;  1JTA A;  4YEL A;  2O1D A;  1QRB A;  3AK5 A;  4OZY A;  2XTY A;  3SZE A;  3B8Y A;  3DU1 X;  1O8F A;  3N90 A;  3WWG A;  2J8I A;  3KRG A;  4Z05 A;  1O8J A;  3VMV A;  1GQ8 A;  1RU4 A;  3FY3 A;  4OPW A;  1XG2 A;  4PMH A;  3ZPP A;  1QRC A;  2X6X A;  4W8S A;  3T9G A;  1OFD A;  2QYU A;  1KQ5 A;  4YEI A;  1DAB A;  3B90 A;  2INU A;  1IDJ A;  2X85 A;  4OJ5 A;  4YZQ A;  1TYX A;  4Z03 A;  5JMC B;  4YFO A;  2NT9 A;  1O88 A;  2O17 A;  1EE6 A;  1OOC A;  4URR A;  2NT6 A;  4XLH A;  3SUC A;  4JRA C;  4YC5 A;  2QXZ A;  3GQ9 A;  2UVE A;  1LLZ A;  2XT4 A;  3SYJ A;  2NST A;  4XON A;  2NSP A;  2VBM A;  1QQ1 A;  1BHE A;  2VFO A;  2BM5 A;  1DBG A;  1QJV A;  1TYU A;  3JX8 A;  2BSP A;  2INV A;  3RIQ A;  4V02 C;  1HF2 A;  4YDT A;  3VSU A;  4C2L A;  1PE9 A;  4HWV A;  4XNF A;  1NHC A;  2O0V A;  4XKW A;  5C1C A;  4YEJ A;  4KH3 A;  4OJO A;  3NAW A;  1K4Z A;  3GQA A;  2UVF A;  4XL9 A;  2NTQ A;  2BM4 A;  1L1I A;  2BX6 A;  2Z8G A;  2IOU G;  3GQ7 A;  3VST A;  1O8G A;  2X6Y A;  1KCD A;  1O8D A;  2O04 A;  4XOR A;  2QZA A;  4I84 A;  2ODL A;  5AMV A;  1OFL A;  1IB4 A;  3SY2 A;  1TYV A;  1RMG A;  3ZSC A;  4YZ0 A;  2VBK A;  1O8E A;  2XC1 A;  3EQO A;  2XTW A;  2QX3 A;  1TSP A;  4W8Q A;  1KCC A;  5C1E A;  4XLA A;  5DNS A;  3BH6 B;  4XR6 A;  1QCX A;  2W7Z A;  2VJJ A;  1IA5 A;  2NTB A;  1QA3 A;  2BM6 A;  3ML3 A;  2BM7 A;  3PET A;  3GRH A;  2F3L A;  1X0C A;  1RWR A;  4XLE A;  4XN0 A;  2EWE A;  2YUH A;  4U4B A;  1PXZ A;  3VMW A;  2NTP A;  4U49 A;  3N6Z A;  1WXR A;  1CZF A;  4OZZ A;  4W8T A;  2VFM A; 
#chains in the Genus database with same CATH homology
 3JUR A;  3VSV A;  4XKV A;  2PYG A;  4Z06 A;  2IQ7 A;  4AVZ A;  4XN3 A;  2VBE A;  1K5C A;  4OJL A;  1O8L A;  3LMW A;  4XLF A;  4EW9 A;  4XQF A;  4MR0 A;  4NK6 A;  1O8I A;  1VBL A;  2VJI A;  1O8H A;  1PLU A;  4XOT A;  4XM3 A;  1H80 A;  4OJ6 A;  4W8R A;  2X3H A;  4MXN A;  3UW0 A;  1JRG A;  3B4N A;  3GQ8 A;  4YZX A;  1WMR A;  2NZM A;  1DBO A;  4OJP A;  2QY1 A;  4NK8 A;  1OGO X;  1OGM X;  2X6W A;  1BN8 A;  1AIR A;  2PEC A;  3EQN A;  1OFM A;  1IDK A;  4XOP A;  1KTW A;  1HG8 A;  4YZA A;  2O0W A;  1O8M A;  2PYH A;  4XLC A;  1O8K A;  4XMY A;  1JTA A;  4YEL A;  2O1D A;  4OZY A;  3B8Y A;  1O8F A;  3WWG A;  3KRG A;  4Z05 A;  1O8J A;  3VMV A;  1GQ8 A;  1RU4 A;  3FY3 A;  1XG2 A;  4PMH A;  3ZPP A;  2X6X A;  4W8S A;  3T9G A;  3B90 A;  2INU A;  1IDJ A;  2X85 A;  4OJ5 A;  4YZQ A;  4Z03 A;  2NT9 A;  1O88 A;  2O17 A;  1EE6 A;  1OOC A;  4URR A;  2NT6 A;  4XLH A;  3SUC A;  2QXZ A;  3GQ9 A;  2UVE A;  2NST A;  4XON A;  2NSP A;  2VBM A;  1BHE A;  1DBG A;  1QJV A;  2BSP A;  2INV A;  3VSU A;  4C2L A;  1PE9 A;  4HWV A;  4XNF A;  1NHC A;  2O0V A;  4XKW A;  5C1C A;  4YEJ A;  4OJO A;  3GQA A;  2UVF A;  4XL9 A;  2NTQ A;  2Z8G A;  3GQ7 A;  3VST A;  1O8G A;  2X6Y A;  1KCD A;  1O8D A;  2O04 A;  4XOR A;  4I84 A;  2ODL A;  5AMV A;  1OFL A;  1IB4 A;  1RMG A;  3ZSC A;  4YZ0 A;  2VBK A;  1O8E A;  3EQO A;  2QX3 A;  4W8Q A;  1KCC A;  5C1E A;  4XLA A;  4XR6 A;  1QCX A;  2VJJ A;  1IA5 A;  2NTB A;  3GRH A;  4XN0 A;  1X0C A;  1RWR A;  4XLE A;  3VMW A;  2EWE A;  4U4B A;  1PXZ A;  2NTP A;  4U49 A;  1CZF A;  4OZZ A;  4W8T A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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