3EQOA

Crystal structure of beta-1,3-glucanase from phanerochaete chrysosporium (lam55a) gluconolactone complex
Total Genus 294
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
294
sequence length
752
structure length
752
Chain Sequence
LGSTCSSPLTHGSAAPGDPFWLQNIQHQGIAAFNGNPGGYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTLLAAPNFSGIALIDADPYLAGGAQYYVNQNNFFRSVRNFVIDLRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGNQQFTVRNLTFNNANTAINAIWNWGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWSGASSGHLQGSLVLNNIQLTNVPVAVGVKGGPTVLAGGTTTINSWAQGNVYHGTNGNPTFTQGNIANINRPGVLLDSTGRIVSKSHPQYTGYAPSDFVSVRSQGAKGDGHTDDTQAIKNVFAKYAGCKIIFFDAGTYIVTDTIQIPAGTQIVGEVWSVIMGTGSKFTDYNNPQPVIQVGAPGSSGVVEITDMIFTTRGPAAGAIIVEWNVHDPSGQQAAAGAWDTHLIIGGTAQSGLQVGQCPTSGAGGNNCFADFLGLHLTSGSSAYLEGMWVWLADHDLDSGGSQQISLWSNGGIMSESQGPVWLIGTASEHHINYQYFLKNAANHYIGLAQTETPYFQPNPNPPAPFITNSNFDPSQLGQGDAWAMTVQNSHGILVFGAGFYSFFSAYNTGCQSPQNCQNQIVNVDSSSDIAFYSLTTVDTTWQFSVNAQGVINRSNNPNGFADTITAWTRN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Glucan 1,3-beta-glucosidase
publication title Crystal structure of glycoside hydrolase family 55 beta -1,3-glucanase from the basidiomycete Phanerochaete chrysosporium
pubmed doi rcsb
source organism Phanerochaete chrysosporium
total genus 294
structure length 752
sequence length 752
chains with identical sequence B
ec nomenclature ec 3.2.1.58: Glucan 1,3-beta-glucosidase.
pdb deposition date 2008-10-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12708 Pectate_lyase_3 Pectate lyase superfamily protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3eqoA02
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3eqoA01
2NTPA 1GQ8A 1PE9A 1OFLA 3UW0A 1BN8A 4OZYA 3ZSCA 1OFMA 3EQOA 2VJIA 2NT9A 2X3HA 4OJPA 4XLCA 1NHCA 1X0CA 2O04A 4XORA 1RMGA 4YEJA 3GQ7A 1RWRA 4XL9A 5C1EA 1XG2A 2NZMA 2VBMA 4OJ6A 4C2LA 4EW9A 4YZQA 3T9GA 4MXNA 2NTBA 4NK8A 2NSTA 4XM3A 2NTQA 4YELA 2Z8GA 4OJOA 1HG8A 4YZXA 1O8DA 1DBOA 1EE6A 4XN3A 1JRGA 2NT6A 2NSPA 2QX3A 5C1CA 2ODLA 1O8IA 2X6XA 1KTWA 1O88A 2O0WA 2X6YA 4XLHA 2O0VA 4XONA 4XOTA 4XQFA 1O8GA 1VBLA 4U4BA 3VMWA 2X85A 2INUA 4I84A 3FY3A 4W8RA 3VSTA 3SUCA 4AVZA 1AIRA 2PYGA 3EQNA 4XR6A 4NK6A 4W8SA 3GQAA 4PMHA 4MR0A 4XLFA 1IA5A 2BSPA 1H80A 2UVFA 3B4NA 1OOCA 1O8EA 4W8QA 4XN0A 1O8LA 3VSUA 3JURA 1O8KA 4URRA 2UVEA 3GQ9A 4OJ5A 4Z06A 1BHEA 4XKVA 1DBGA 1QJVA 4XMYA 3GQ8A 4OJLA 3GRHA 4OZZA 4Z03A 2IQ7A 2X6WA 1QCXA 2O1DA 4XOPA 1O8MA 1IDKA 1RU4A 1O8JA 4XLEA 4XLAA 1PLUA 1OGMX 2PYHA 2QY1A 3WWGA 1KCDA 3VMVA 4XKWA 2QXZA 4YZ0A 3LMWA 4W8TA 4XNFA 3B8YA 1CZFA 5AMVA 2VJJA 4U49A 1WMRA 1OGOX 1O8HA 1O8FA 1IB4A 1JTAA 2INVA 3ZPPA 1IDJA 3B90A 4Z05A 2O17A 4YZAA 3VSVA 2PECA 2VBKA 1PXZA 3KRGA 2VBEA 1KCCA 2EWEA 1K5CA 4HWVA
chains in the Genus database with same CATH superfamily
2NTPA 3PETA 1GQ8A 1PE9A 1TSPA 1OFLA 2BM5A 1BN8A 3H09A 4OZYA 3UW0A 3ZSCA 1OFMA 3EQOA 2VJIA 2NT9A 2X3HA 1OFEA 4OJPA 4XLCA 2BM6A 1NHCA 1X0CA 2O04A 4XORA 1RMGA 4YEJA 3GQ7A 1RWRA 1TYVA 4XL9A 5C1EA 2VFMA 1CLWA 1XG2A 2NZMA 2VBMA 4OJ6A 3TH0A 4YZQA 3T9GA 4MXNA 2NTBA 4NK8A 4EW9A 3BH7B 2NSTA 4XM3A 2NTQA 2QYUA 4YELA 2Z8GA 3ML3A 1L1IA 4OJOA 1HG8A 4YZXA 1KQ5A 1O8DA 1DBOA 1EE6A 2YUHA 4XN3A 1JRGA 2NT6A 2NSPA 2QX3A 5C1CA 1K8FA 2ODLA 3JX8A 4YFOA 1O8IA 2VFPA 2X6XA 4YDTA 1KTWA 1O88A 2O0WA 2X6YA 4XLHA 2O0VA 1QA3A 5JMCB 4XONA 4XOTA 4XQFA 1O8GA 1VBLA 4U4BA 3VMWA 2X85A 2INUA 4I84A 3P4GA 3FY3A 4W8RA 1TYXA 3VSTA 3SUCA 1QA1A 4AVZA 3RIQA 1AIRA 2PYGA 4OM9A 3EQNA 4XR6A 1EA0A 4NK6A 2W7ZA 4W8SA 3GQAA 2XTXA 2F3LA 4YCQA 2J8IA 4PMHA 4OPWA 4MR0A 4XLFA 1IA5A 2BSPA 1H80A 2UVFA 2O6WA 1LM1A 2QZAA 2VFQA 2BM4A 3B4NA 1OOCA 3LYCA 1O8EA 4W8QA 4XN0A 1O8LA 3VSUA 3JURA 1O8KA 4URRA 2VFNA 3N90A 1EZGA 4JRAC 2UVEA 1QQ1A 3GQ9A 4OJ5A 4Z06A 1QA2A 1BHEA 4XKVA 2XTYA 1DBGA 3DU1X 1LLZA 1QJVA 3LJYA 3GQ8A 2B0RA 4XMYA 3SY2A 4OJLA 3GRHA 4OZZA 2VFOA 4Z03A 2IQ7A 2X6WA 3SYJA 1QCXA 2O1DA 4XOPA 1O8MA 1TYUA 4YEIA 1QRCA 1RU4A 1IDKA 1O8JA 3BH6B 2V5IA 4XLEA 4XLAA 1PLUA 2XC1A 1OGMX 2BX6A 2PYHA 2QY1A 3NAWA 4YC5A 3WWGA 1KCDA 3VMVA 4V02C 1HF2A 2BM7A 4XKWA 2QXZA 5DNSA 2XT2A 4YZ0A 3AK5A 3LMWA 4W8TA 4XNFA 4C2LA 3B8YA 1WXRA 1QRBA 1LLWA 1CZFA 1OFDA 2XTWA 2VJJA 5AMVA 4U49A 1WMRA 3SQVA 5JLVC 3PSSA 1OGOX 1TYWA 3SZEA 2XT4A 1O8HA 3PSZA 3NB2A 1O8FA 1IB4A 1JTAA 2INVA 3ZPPA 4KH3A 1IDJA 3B90A 4Z05A 2O17A 4YZAA 3N6ZA 3VSVA 2PECA 2VBKA 1DABA 2J8KA 2IOUG 2G0YA 1PXZA 1K4ZA 3KRGA 2VBEA 1KCCA 2EWEA 1K5CA 4HWVA
chains in the Genus database with same CATH topology
2NTPA 1GQ8A 1PE9A 1OFLA 3UW0A 1BN8A 4OZYA 3ZSCA 1OFMA 3EQOA 2VJIA 2NT9A 2X3HA 4OJPA 4XLCA 1NHCA 1X0CA 2O04A 4XORA 1RMGA 4YEJA 3GQ7A 1RWRA 4XL9A 5C1EA 1XG2A 2NZMA 2VBMA 4OJ6A 4C2LA 4EW9A 4YZQA 3T9GA 4MXNA 2NTBA 4NK8A 2NSTA 4XM3A 2NTQA 4YELA 2Z8GA 4OJOA 1HG8A 4YZXA 1O8DA 1DBOA 1EE6A 4XN3A 1JRGA 2NT6A 2NSPA 2QX3A 5C1CA 2ODLA 1O8IA 2X6XA 1KTWA 1O88A 2O0WA 2X6YA 4XLHA 2O0VA 4XONA 4XOTA 4XQFA 1O8GA 1VBLA 4U4BA 3VMWA 2X85A 2INUA 4I84A 3FY3A 4W8RA 3VSTA 3SUCA 4AVZA 1AIRA 2PYGA 3EQNA 4XR6A 4NK6A 4W8SA 3GQAA 4PMHA 4MR0A 4XLFA 1IA5A 2BSPA 1H80A 2UVFA 3B4NA 1OOCA 1O8EA 4W8QA 4XN0A 1O8LA 3VSUA 3JURA 1O8KA 4URRA 2UVEA 3GQ9A 4OJ5A 4Z06A 1BHEA 4XKVA 1DBGA 1QJVA 4XMYA 3GQ8A 4OJLA 3GRHA 4OZZA 4Z03A 2IQ7A 2X6WA 1QCXA 2O1DA 4XOPA 1O8MA 1IDKA 1RU4A 1O8JA 4XLEA 4XLAA 1PLUA 1OGMX 2PYHA 2QY1A 3WWGA 1KCDA 3VMVA 4XKWA 2QXZA 4YZ0A 3LMWA 4W8TA 4XNFA 3B8YA 1CZFA 5AMVA 2VJJA 4U49A 1WMRA 1OGOX 1O8HA 1O8FA 1IB4A 1JTAA 2INVA 3ZPPA 1IDJA 3B90A 4Z05A 2O17A 4YZAA 3VSVA 2PECA 2VBKA 1PXZA 3KRGA 2VBEA 1KCCA 2EWEA 1K5CA 4HWVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NTP A;  1GQ8 A;  1PE9 A;  1OFL A;  3UW0 A;  1BN8 A;  4OZY A;  3ZSC A;  1OFM A;  3EQO A;  2VJI A;  2NT9 A;  2X3H A;  4OJP A;  4XLC A;  1NHC A;  1X0C A;  2O04 A;  4XOR A;  1RMG A;  4YEJ A;  3GQ7 A;  1RWR A;  4XL9 A;  5C1E A;  1XG2 A;  2NZM A;  2VBM A;  4OJ6 A;  4C2L A;  4EW9 A;  4YZQ A;  3T9G A;  4MXN A;  2NTB A;  4NK8 A;  2NST A;  4XM3 A;  2NTQ A;  4YEL A;  2Z8G A;  4OJO A;  1HG8 A;  4YZX A;  1O8D A;  1DBO A;  1EE6 A;  4XN3 A;  1JRG A;  2NT6 A;  2NSP A;  2QX3 A;  5C1C A;  2ODL A;  1O8I A;  2X6X A;  1KTW A;  1O88 A;  2O0W A;  2X6Y A;  4XLH A;  2O0V A;  4XON A;  4XOT A;  4XQF A;  1O8G A;  1VBL A;  4U4B A;  3VMW A;  2X85 A;  2INU A;  4I84 A;  3FY3 A;  4W8R A;  3VST A;  3SUC A;  4AVZ A;  1AIR A;  2PYG A;  3EQN A;  4XR6 A;  4NK6 A;  4W8S A;  3GQA A;  4PMH A;  4MR0 A;  4XLF A;  1IA5 A;  2BSP A;  1H80 A;  2UVF A;  3B4N A;  1OOC A;  1O8E A;  4W8Q A;  4XN0 A;  1O8L A;  3VSU A;  3JUR A;  1O8K A;  4URR A;  2UVE A;  3GQ9 A;  4OJ5 A;  4Z06 A;  1BHE A;  4XKV A;  1DBG A;  1QJV A;  4XMY A;  3GQ8 A;  4OJL A;  3GRH A;  4OZZ A;  4Z03 A;  2IQ7 A;  2X6W A;  1QCX A;  2O1D A;  4XOP A;  1O8M A;  1IDK A;  1RU4 A;  1O8J A;  4XLE A;  4XLA A;  1PLU A;  1OGM X;  2PYH A;  2QY1 A;  3WWG A;  1KCD A;  3VMV A;  4XKW A;  2QXZ A;  4YZ0 A;  3LMW A;  4W8T A;  4XNF A;  3B8Y A;  1CZF A;  5AMV A;  2VJJ A;  4U49 A;  1WMR A;  1OGO X;  1O8H A;  1O8F A;  1IB4 A;  1JTA A;  2INV A;  3ZPP A;  1IDJ A;  3B90 A;  4Z05 A;  2O17 A;  4YZA A;  3VSV A;  2PEC A;  2VBK A;  1PXZ A;  3KRG A;  2VBE A;  1KCC A;  2EWE A;  1K5C A;  4HWV A; 
#chains in the Genus database with same CATH topology
 2NTP A;  3PET A;  1GQ8 A;  1PE9 A;  1TSP A;  1OFL A;  2BM5 A;  1BN8 A;  3H09 A;  4OZY A;  3UW0 A;  3ZSC A;  1OFM A;  3EQO A;  2VJI A;  2NT9 A;  2X3H A;  1OFE A;  4OJP A;  4XLC A;  2BM6 A;  1NHC A;  1X0C A;  2O04 A;  4XOR A;  1RMG A;  4YEJ A;  3GQ7 A;  1RWR A;  1TYV A;  4XL9 A;  5C1E A;  2VFM A;  1CLW A;  1XG2 A;  2NZM A;  2VBM A;  4OJ6 A;  3TH0 A;  4YZQ A;  3T9G A;  4MXN A;  2NTB A;  4NK8 A;  4EW9 A;  3BH7 B;  2NST A;  4XM3 A;  2NTQ A;  2QYU A;  4YEL A;  2Z8G A;  3ML3 A;  1L1I A;  4OJO A;  1HG8 A;  4YZX A;  1KQ5 A;  1O8D A;  1DBO A;  1EE6 A;  2YUH A;  4XN3 A;  1JRG A;  2NT6 A;  2NSP A;  2QX3 A;  5C1C A;  1K8F A;  2ODL A;  3JX8 A;  4YFO A;  1O8I A;  2VFP A;  2X6X A;  4YDT A;  1KTW A;  1O88 A;  2O0W A;  2X6Y A;  4XLH A;  2O0V A;  1QA3 A;  5JMC B;  4XON A;  4XOT A;  4XQF A;  1O8G A;  1VBL A;  4U4B A;  3VMW A;  2X85 A;  2INU A;  4I84 A;  3P4G A;  3FY3 A;  4W8R A;  1TYX A;  3VST A;  3SUC A;  1QA1 A;  4AVZ A;  3RIQ A;  1AIR A;  2PYG A;  4OM9 A;  3EQN A;  4XR6 A;  1EA0 A;  4NK6 A;  2W7Z A;  4W8S A;  3GQA A;  2XTX A;  2F3L A;  4YCQ A;  2J8I A;  4PMH A;  4OPW A;  4MR0 A;  4XLF A;  1IA5 A;  2BSP A;  1H80 A;  2UVF A;  2O6W A;  1LM1 A;  2QZA A;  2VFQ A;  2BM4 A;  3B4N A;  1OOC A;  3LYC A;  1O8E A;  4W8Q A;  4XN0 A;  1O8L A;  3VSU A;  3JUR A;  1O8K A;  4URR A;  2VFN A;  3N90 A;  1EZG A;  4JRA C;  2UVE A;  1QQ1 A;  3GQ9 A;  4OJ5 A;  4Z06 A;  1QA2 A;  1BHE A;  4XKV A;  2XTY A;  1DBG A;  3DU1 X;  1LLZ A;  1QJV A;  3LJY A;  3GQ8 A;  2B0R A;  4XMY A;  3SY2 A;  4OJL A;  3GRH A;  4OZZ A;  2VFO A;  4Z03 A;  2IQ7 A;  2X6W A;  3SYJ A;  1QCX A;  2O1D A;  4XOP A;  1O8M A;  1TYU A;  4YEI A;  1QRC A;  1RU4 A;  1IDK A;  1O8J A;  3BH6 B;  2V5I A;  4XLE A;  4XLA A;  1PLU A;  2XC1 A;  1OGM X;  2BX6 A;  2PYH A;  2QY1 A;  3NAW A;  4YC5 A;  3WWG A;  1KCD A;  3VMV A;  4V02 C;  1HF2 A;  2BM7 A;  4XKW A;  2QXZ A;  5DNS A;  2XT2 A;  4YZ0 A;  3AK5 A;  3LMW A;  4W8T A;  4XNF A;  4C2L A;  3B8Y A;  1WXR A;  1QRB A;  1LLW A;  1CZF A;  1OFD A;  2XTW A;  2VJJ A;  5AMV A;  4U49 A;  1WMR A;  3SQV A;  5JLV C;  3PSS A;  1OGO X;  1TYW A;  3SZE A;  2XT4 A;  1O8H A;  3PSZ A;  3NB2 A;  1O8F A;  1IB4 A;  1JTA A;  2INV A;  3ZPP A;  4KH3 A;  1IDJ A;  3B90 A;  4Z05 A;  2O17 A;  4YZA A;  3N6Z A;  3VSV A;  2PEC A;  2VBK A;  1DAB A;  2J8K A;  2IOU G;  2G0Y A;  1PXZ A;  1K4Z A;  3KRG A;  2VBE A;  1KCC A;  2EWE A;  1K5C A;  4HWV A; 
#chains in the Genus database with same CATH homology
 2NTP A;  1GQ8 A;  1PE9 A;  1OFL A;  3UW0 A;  1BN8 A;  4OZY A;  3ZSC A;  1OFM A;  3EQO A;  2VJI A;  2NT9 A;  2X3H A;  4OJP A;  4XLC A;  1NHC A;  1X0C A;  2O04 A;  4XOR A;  1RMG A;  4YEJ A;  3GQ7 A;  1RWR A;  4XL9 A;  5C1E A;  1XG2 A;  2NZM A;  2VBM A;  4OJ6 A;  4C2L A;  4EW9 A;  4YZQ A;  3T9G A;  4MXN A;  2NTB A;  4NK8 A;  2NST A;  4XM3 A;  2NTQ A;  4YEL A;  2Z8G A;  4OJO A;  1HG8 A;  4YZX A;  1O8D A;  1DBO A;  1EE6 A;  4XN3 A;  1JRG A;  2NT6 A;  2NSP A;  2QX3 A;  5C1C A;  2ODL A;  1O8I A;  2X6X A;  1KTW A;  1O88 A;  2O0W A;  2X6Y A;  4XLH A;  2O0V A;  4XON A;  4XOT A;  4XQF A;  1O8G A;  1VBL A;  4U4B A;  3VMW A;  2X85 A;  2INU A;  4I84 A;  3FY3 A;  4W8R A;  3VST A;  3SUC A;  4AVZ A;  1AIR A;  2PYG A;  3EQN A;  4XR6 A;  4NK6 A;  4W8S A;  3GQA A;  4PMH A;  4MR0 A;  4XLF A;  1IA5 A;  2BSP A;  1H80 A;  2UVF A;  3B4N A;  1OOC A;  1O8E A;  4W8Q A;  4XN0 A;  1O8L A;  3VSU A;  3JUR A;  1O8K A;  4URR A;  2UVE A;  3GQ9 A;  4OJ5 A;  4Z06 A;  1BHE A;  4XKV A;  1DBG A;  1QJV A;  4XMY A;  3GQ8 A;  4OJL A;  3GRH A;  4OZZ A;  4Z03 A;  2IQ7 A;  2X6W A;  1QCX A;  2O1D A;  4XOP A;  1O8M A;  1IDK A;  1RU4 A;  1O8J A;  4XLE A;  4XLA A;  1PLU A;  1OGM X;  2PYH A;  2QY1 A;  3WWG A;  1KCD A;  3VMV A;  4XKW A;  2QXZ A;  4YZ0 A;  3LMW A;  4W8T A;  4XNF A;  3B8Y A;  1CZF A;  5AMV A;  2VJJ A;  4U49 A;  1WMR A;  1OGO X;  1O8H A;  1O8F A;  1IB4 A;  1JTA A;  2INV A;  3ZPP A;  1IDJ A;  3B90 A;  4Z05 A;  2O17 A;  4YZA A;  3VSV A;  2PEC A;  2VBK A;  1PXZ A;  3KRG A;  2VBE A;  1KCC A;  2EWE A;  1K5C A;  4HWV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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