1X0CA

Improved crystal structure of isopullulanase from aspergillus niger atcc 9642
Total Genus 181

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
181
sequence length
549
structure length
549
Chain Sequence
REFMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASSSLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSSANSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Aspergillus niger
publication title Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
pubmed doi rcsb
molecule keywords Isopullulanase
total genus 181
structure length 549
sequence length 549
chains with identical sequence B
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2005-03-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 1x0cA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 1x0cA02
1O8DA 3T9GA 4XOPA 3VMVA 3VSUA 1O8JA 2X6XA 4OJ6A 1CZFA 3B8YA 4XQFA 1PLUA 4XOTA 5C1EA 3GQ7A 3VSTA 1WMRA 3B4NA 1BHEA 4URRA 2O0WA 3JURA 2NT6A 2NTBA 1EE6A 3B90A 4W8TA 1O8HA 4W8RA 2IQ7A 2INUA 3KRGA 3ZSCA 2X85A 1IA5A 1OFLA 4Z05A 1K5CA 2VBMA 1HG8A 1RWRA 4XLAA 3EQNA 4YEJA 1RMGA 1O8MA 1NHCA 4YZQA 2NZMA 3LMWA 1O8IA 2X6WA 4EW9A 4XKVA 4XM3A 4OJ5A 4OJPA 4YELA 1KCCA 3UW0A 4U49A 4XORA 4XL9A 1O8FA 2PYGA 1OGOX 2NT9A 2EWEA 3GRHA 4C2LA 3VSVA 4NK6A 1KTWA 1QJVA 4YZAA 2QXZA 1VBLA 2X3HA 1QCXA 4XN3A 3SUCA 4YZXA 2VJJA 4XMYA 1JTAA 4AVZA 4XONA 4XR6A 1H80A 2PYHA 1IDJA 1GQ8A 1JRGA 2QX3A 4OZYA 1DBOA 1KCDA 1O8LA 3EQOA 4MXNA 3VMWA 2VBEA 4PMHA 4XLEA 1XG2A 4XKWA 1IDKA 4MR0A 3GQ9A 4NK8A 1O8GA 4U4BA 4Z03A 1O88A 2O04A 4YZ0A 2O1DA 4OJOA 3GQAA 3WWGA 4W8SA 3FY3A 1O8KA 4HWVA 4Z06A 4W8QA 4OJLA 5AMVA 1IB4A 2O17A 1DBGA 2ODLA 1OFMA 1PE9A 2NTQA 2X6YA 1X0CA 2UVEA 2PECA 3ZPPA 4XNFA 4XN0A 2NSPA 1AIRA 4XLCA 2UVFA 2QY1A 4I84A 1OGMX 2BSPA 5C1CA 1OOCA 1BN8A 3GQ8A 4XLFA 2VJIA 2Z8GA 2INVA 1O8EA 2O0VA 4OZZA 2NTPA 4XLHA 1PXZA 2NSTA 1RU4A 2VBKA
chains in the Genus database with same CATH superfamily
1O8DA 3T9GA 4XOPA 3VMVA 3VSUA 1O8JA 2X6XA 4YCQA 4OJ6A 1CZFA 2XTWA 3B8YA 4JRAC 4XQFA 1PLUA 3LJYA 1LLWA 3BH6B 4XOTA 5C1EA 2BX6A 2IOUG 1K8FA 3GQ7A 1WMRA 2J8IA 3B4NA 1BHEA 3SY2A 3NAWA 3VSTA 3N90A 4URRA 2O0WA 3JURA 2NT6A 2NTBA 2XTXA 1QA2A 1LLZA 1EE6A 4V02C 3B90A 4W8TA 1O8HA 4W8RA 2IQ7A 3DU1X 2INUA 1DABA 1HF2A 3KRGA 3ZSCA 3AK5A 2X85A 2B0RA 1IA5A 1K4ZA 1OFLA 2VFOA 3JX8A 4OM9A 4Z05A 1K5CA 2VBMA 1HG8A 1RWRA 2XTYA 4XLAA 3EQNA 4YEJA 1RMGA 1O8MA 3TH0A 1NHCA 4YZQA 2NZMA 3LMWA 1O8IA 1L1IA 2X6WA 4EW9A 3SYJA 4XKVA 4XM3A 4OJ5A 4OJPA 4YELA 1KCCA 1TYWA 2O6WA 4OPWA 4U49A 4XORA 3UW0A 4XL9A 1O8FA 1OFDA 2PYGA 3N6ZA 1OGOX 2BM5A 2NT9A 2EWEA 1TYVA 2VFPA 3SQVA 3GRHA 4C2LA 4YEIA 3PETA 3VSVA 1EA0A 4NK6A 1KTWA 1QJVA 4YZAA 3RIQA 2QXZA 1TYUA 1VBLA 2X3HA 3PSZA 1QCXA 4XN3A 3SUCA 4YZXA 5DNSA 2VJJA 4XMYA 1JTAA 4AVZA 4XONA 3PSSA 4XR6A 4YC5A 2G0YA 1H80A 2PYHA 1IDJA 1GQ8A 1JRGA 2QX3A 4OZYA 1DBOA 1KCDA 1O8LA 3EQOA 4MXNA 3VMWA 2VFQA 2VBEA 4PMHA 2QYUA 3NB2A 4XLEA 1XG2A 3P4GA 2VFMA 2V5IA 2W7ZA 1CLWA 1IDKA 4MR0A 4XKWA 4YDTA 2BM4A 3GQ9A 1QQ1A 4NK8A 1QA3A 1O8GA 4U4BA 2XT4A 3BH7B 4Z03A 1O88A 2J8KA 2O04A 4YZ0A 1LM1A 1QA1A 2O1DA 4OJOA 3GQAA 3WWGA 2YUHA 1QRBA 2BM6A 4W8SA 3FY3A 1O8KA 4HWVA 4Z06A 4W8QA 4OJLA 5AMVA 2VFNA 1KQ5A 1IB4A 2O17A 1DBGA 4KH3A 2ODLA 1OFMA 1PE9A 1OFEA 2NTQA 2X6YA 1X0CA 3ML3A 1EZGA 2UVEA 2PECA 3ZPPA 4XNFA 4XN0A 2NSPA 1AIRA 4XLCA 2UVFA 2QY1A 4I84A 2XT2A 1OGMX 2BSPA 5C1CA 1OOCA 1BN8A 3LYCA 3GQ8A 2XC1A 5JMCB 4XLFA 1TYXA 2VJIA 2Z8GA 2INVA 1O8EA 1TSPA 2F3LA 1WXRA 2BM7A 2O0VA 4OZZA 2NTPA 4XLHA 3SZEA 1PXZA 3H09A 1QRCA 2NSTA 5JLVC 1RU4A 2QZAA 2VBKA 4YFOA
chains in the Genus database with same CATH topology
1O8DA 3T9GA 4XOPA 3VMVA 3VSUA 1O8JA 2X6XA 4OJ6A 1CZFA 3B8YA 4XQFA 1PLUA 4XOTA 5C1EA 3GQ7A 3VSTA 1WMRA 3B4NA 1BHEA 4URRA 2O0WA 3JURA 2NT6A 2NTBA 1EE6A 3B90A 4W8TA 1O8HA 4W8RA 2IQ7A 2INUA 3KRGA 3ZSCA 2X85A 1IA5A 1OFLA 4Z05A 1K5CA 2VBMA 1HG8A 1RWRA 4XLAA 3EQNA 4YEJA 1RMGA 1O8MA 1NHCA 4YZQA 2NZMA 3LMWA 1O8IA 2X6WA 4EW9A 4XKVA 4XM3A 4OJ5A 4OJPA 4YELA 1KCCA 3UW0A 4U49A 4XORA 4XL9A 1O8FA 2PYGA 1OGOX 2NT9A 2EWEA 3GRHA 4C2LA 3VSVA 4NK6A 1KTWA 1QJVA 4YZAA 2QXZA 1VBLA 2X3HA 1QCXA 4XN3A 3SUCA 4YZXA 2VJJA 4XMYA 1JTAA 4AVZA 4XONA 4XR6A 1H80A 2PYHA 1IDJA 1GQ8A 1JRGA 2QX3A 4OZYA 1DBOA 1KCDA 1O8LA 3EQOA 4MXNA 3VMWA 2VBEA 4PMHA 4XLEA 1XG2A 4XKWA 1IDKA 4MR0A 3GQ9A 4NK8A 1O8GA 4U4BA 4Z03A 1O88A 2O04A 4YZ0A 2O1DA 4OJOA 3GQAA 3WWGA 4W8SA 3FY3A 1O8KA 4HWVA 4Z06A 4W8QA 4OJLA 5AMVA 1IB4A 2O17A 1DBGA 2ODLA 1OFMA 1PE9A 2NTQA 2X6YA 1X0CA 2UVEA 2PECA 3ZPPA 4XNFA 4XN0A 2NSPA 1AIRA 4XLCA 2UVFA 2QY1A 4I84A 1OGMX 2BSPA 5C1CA 1OOCA 1BN8A 3GQ8A 4XLFA 2VJIA 2Z8GA 2INVA 1O8EA 2O0VA 4OZZA 2NTPA 4XLHA 1PXZA 2NSTA 1RU4A 2VBKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1O8D A;  3T9G A;  4XOP A;  3VMV A;  3VSU A;  1O8J A;  2X6X A;  4OJ6 A;  1CZF A;  3B8Y A;  4XQF A;  1PLU A;  4XOT A;  5C1E A;  3GQ7 A;  3VST A;  1WMR A;  3B4N A;  1BHE A;  4URR A;  2O0W A;  3JUR A;  2NT6 A;  2NTB A;  1EE6 A;  3B90 A;  4W8T A;  1O8H A;  4W8R A;  2IQ7 A;  2INU A;  3KRG A;  3ZSC A;  2X85 A;  1IA5 A;  1OFL A;  4Z05 A;  1K5C A;  2VBM A;  1HG8 A;  1RWR A;  4XLA A;  3EQN A;  4YEJ A;  1RMG A;  1O8M A;  1NHC A;  4YZQ A;  2NZM A;  3LMW A;  1O8I A;  2X6W A;  4EW9 A;  4XKV A;  4XM3 A;  4OJ5 A;  4OJP A;  4YEL A;  1KCC A;  3UW0 A;  4U49 A;  4XOR A;  4XL9 A;  1O8F A;  2PYG A;  1OGO X;  2NT9 A;  2EWE A;  3GRH A;  4C2L A;  3VSV A;  4NK6 A;  1KTW A;  1QJV A;  4YZA A;  2QXZ A;  1VBL A;  2X3H A;  1QCX A;  4XN3 A;  3SUC A;  4YZX A;  2VJJ A;  4XMY A;  1JTA A;  4AVZ A;  4XON A;  4XR6 A;  1H80 A;  2PYH A;  1IDJ A;  1GQ8 A;  1JRG A;  2QX3 A;  4OZY A;  1DBO A;  1KCD A;  1O8L A;  3EQO A;  4MXN A;  3VMW A;  2VBE A;  4PMH A;  4XLE A;  1XG2 A;  4XKW A;  1IDK A;  4MR0 A;  3GQ9 A;  4NK8 A;  1O8G A;  4U4B A;  4Z03 A;  1O88 A;  2O04 A;  4YZ0 A;  2O1D A;  4OJO A;  3GQA A;  3WWG A;  4W8S A;  3FY3 A;  1O8K A;  4HWV A;  4Z06 A;  4W8Q A;  4OJL A;  5AMV A;  1IB4 A;  2O17 A;  1DBG A;  2ODL A;  1OFM A;  1PE9 A;  2NTQ A;  2X6Y A;  1X0C A;  2UVE A;  2PEC A;  3ZPP A;  4XNF A;  4XN0 A;  2NSP A;  1AIR A;  4XLC A;  2UVF A;  2QY1 A;  4I84 A;  1OGM X;  2BSP A;  5C1C A;  1OOC A;  1BN8 A;  3GQ8 A;  4XLF A;  2VJI A;  2Z8G A;  2INV A;  1O8E A;  2O0V A;  4OZZ A;  2NTP A;  4XLH A;  1PXZ A;  2NST A;  1RU4 A;  2VBK A; 
#chains in the Genus database with same CATH topology
 1O8D A;  3T9G A;  4XOP A;  3VMV A;  3VSU A;  1O8J A;  2X6X A;  4YCQ A;  4OJ6 A;  1CZF A;  2XTW A;  3B8Y A;  4JRA C;  4XQF A;  1PLU A;  3LJY A;  1LLW A;  3BH6 B;  4XOT A;  5C1E A;  2BX6 A;  2IOU G;  1K8F A;  3GQ7 A;  1WMR A;  2J8I A;  3B4N A;  1BHE A;  3SY2 A;  3NAW A;  3VST A;  3N90 A;  4URR A;  2O0W A;  3JUR A;  2NT6 A;  2NTB A;  2XTX A;  1QA2 A;  1LLZ A;  1EE6 A;  4V02 C;  3B90 A;  4W8T A;  1O8H A;  4W8R A;  2IQ7 A;  3DU1 X;  2INU A;  1DAB A;  1HF2 A;  3KRG A;  3ZSC A;  3AK5 A;  2X85 A;  2B0R A;  1IA5 A;  1K4Z A;  1OFL A;  2VFO A;  3JX8 A;  4OM9 A;  4Z05 A;  1K5C A;  2VBM A;  1HG8 A;  1RWR A;  2XTY A;  4XLA A;  3EQN A;  4YEJ A;  1RMG A;  1O8M A;  3TH0 A;  1NHC A;  4YZQ A;  2NZM A;  3LMW A;  1O8I A;  1L1I A;  2X6W A;  4EW9 A;  3SYJ A;  4XKV A;  4XM3 A;  4OJ5 A;  4OJP A;  4YEL A;  1KCC A;  1TYW A;  2O6W A;  4OPW A;  4U49 A;  4XOR A;  3UW0 A;  4XL9 A;  1O8F A;  1OFD A;  2PYG A;  3N6Z A;  1OGO X;  2BM5 A;  2NT9 A;  2EWE A;  1TYV A;  2VFP A;  3SQV A;  3GRH A;  4C2L A;  4YEI A;  3PET A;  3VSV A;  1EA0 A;  4NK6 A;  1KTW A;  1QJV A;  4YZA A;  3RIQ A;  2QXZ A;  1TYU A;  1VBL A;  2X3H A;  3PSZ A;  1QCX A;  4XN3 A;  3SUC A;  4YZX A;  5DNS A;  2VJJ A;  4XMY A;  1JTA A;  4AVZ A;  4XON A;  3PSS A;  4XR6 A;  4YC5 A;  2G0Y A;  1H80 A;  2PYH A;  1IDJ A;  1GQ8 A;  1JRG A;  2QX3 A;  4OZY A;  1DBO A;  1KCD A;  1O8L A;  3EQO A;  4MXN A;  3VMW A;  2VFQ A;  2VBE A;  4PMH A;  2QYU A;  3NB2 A;  4XLE A;  1XG2 A;  3P4G A;  2VFM A;  2V5I A;  2W7Z A;  1CLW A;  1IDK A;  4MR0 A;  4XKW A;  4YDT A;  2BM4 A;  3GQ9 A;  1QQ1 A;  4NK8 A;  1QA3 A;  1O8G A;  4U4B A;  2XT4 A;  3BH7 B;  4Z03 A;  1O88 A;  2J8K A;  2O04 A;  4YZ0 A;  1LM1 A;  1QA1 A;  2O1D A;  4OJO A;  3GQA A;  3WWG A;  2YUH A;  1QRB A;  2BM6 A;  4W8S A;  3FY3 A;  1O8K A;  4HWV A;  4Z06 A;  4W8Q A;  4OJL A;  5AMV A;  2VFN A;  1KQ5 A;  1IB4 A;  2O17 A;  1DBG A;  4KH3 A;  2ODL A;  1OFM A;  1PE9 A;  1OFE A;  2NTQ A;  2X6Y A;  1X0C A;  3ML3 A;  1EZG A;  2UVE A;  2PEC A;  3ZPP A;  4XNF A;  4XN0 A;  2NSP A;  1AIR A;  4XLC A;  2UVF A;  2QY1 A;  4I84 A;  2XT2 A;  1OGM X;  2BSP A;  5C1C A;  1OOC A;  1BN8 A;  3LYC A;  3GQ8 A;  2XC1 A;  5JMC B;  4XLF A;  1TYX A;  2VJI A;  2Z8G A;  2INV A;  1O8E A;  1TSP A;  2F3L A;  1WXR A;  2BM7 A;  2O0V A;  4OZZ A;  2NTP A;  4XLH A;  3SZE A;  1PXZ A;  3H09 A;  1QRC A;  2NST A;  5JLV C;  1RU4 A;  2QZA A;  2VBK A;  4YFO A; 
#chains in the Genus database with same CATH homology
 1O8D A;  3T9G A;  4XOP A;  3VMV A;  3VSU A;  1O8J A;  2X6X A;  4OJ6 A;  1CZF A;  3B8Y A;  4XQF A;  1PLU A;  4XOT A;  5C1E A;  3GQ7 A;  3VST A;  1WMR A;  3B4N A;  1BHE A;  4URR A;  2O0W A;  3JUR A;  2NT6 A;  2NTB A;  1EE6 A;  3B90 A;  4W8T A;  1O8H A;  4W8R A;  2IQ7 A;  2INU A;  3KRG A;  3ZSC A;  2X85 A;  1IA5 A;  1OFL A;  4Z05 A;  1K5C A;  2VBM A;  1HG8 A;  1RWR A;  4XLA A;  3EQN A;  4YEJ A;  1RMG A;  1O8M A;  1NHC A;  4YZQ A;  2NZM A;  3LMW A;  1O8I A;  2X6W A;  4EW9 A;  4XKV A;  4XM3 A;  4OJ5 A;  4OJP A;  4YEL A;  1KCC A;  3UW0 A;  4U49 A;  4XOR A;  4XL9 A;  1O8F A;  2PYG A;  1OGO X;  2NT9 A;  2EWE A;  3GRH A;  4C2L A;  3VSV A;  4NK6 A;  1KTW A;  1QJV A;  4YZA A;  2QXZ A;  1VBL A;  2X3H A;  1QCX A;  4XN3 A;  3SUC A;  4YZX A;  2VJJ A;  4XMY A;  1JTA A;  4AVZ A;  4XON A;  4XR6 A;  1H80 A;  2PYH A;  1IDJ A;  1GQ8 A;  1JRG A;  2QX3 A;  4OZY A;  1DBO A;  1KCD A;  1O8L A;  3EQO A;  4MXN A;  3VMW A;  2VBE A;  4PMH A;  4XLE A;  1XG2 A;  4XKW A;  1IDK A;  4MR0 A;  3GQ9 A;  4NK8 A;  1O8G A;  4U4B A;  4Z03 A;  1O88 A;  2O04 A;  4YZ0 A;  2O1D A;  4OJO A;  3GQA A;  3WWG A;  4W8S A;  3FY3 A;  1O8K A;  4HWV A;  4Z06 A;  4W8Q A;  4OJL A;  5AMV A;  1IB4 A;  2O17 A;  1DBG A;  2ODL A;  1OFM A;  1PE9 A;  2NTQ A;  2X6Y A;  1X0C A;  2UVE A;  2PEC A;  3ZPP A;  4XNF A;  4XN0 A;  2NSP A;  1AIR A;  4XLC A;  2UVF A;  2QY1 A;  4I84 A;  1OGM X;  2BSP A;  5C1C A;  1OOC A;  1BN8 A;  3GQ8 A;  4XLF A;  2VJI A;  2Z8G A;  2INV A;  1O8E A;  2O0V A;  4OZZ A;  2NTP A;  4XLH A;  1PXZ A;  2NST A;  1RU4 A;  2VBK A; 
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