2INU | Genus

Total Genus 146

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	146
sequence length	399
structure length	399
Chain Sequence	PNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDVSYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGNNLFPRGRSLIEFTGCNRCSVTSNRLQGFYPGMLRLLNGCKENLITANHIRRTNEGYPPFIGRGNGLDDLYGVVHIAGDNNLISDNLFAYNVPPANIAPAGAQPTQILIAGGDANVVALNHVVSDVASQHVVLDASTTHSKVLDSGTASQITSYSSDTAIRPTP

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Lyase
source organism	Bacillus sp. snu-7
publication title	Structural and functional insights into intramolecular fructosyl transfer by insulin fructotransferase pubmed doi rcsb
molecule keywords	Insulin fructotransferase
total genus	146
structure length	399
sequence length	399
chains with identical sequence	B, C
ec nomenclature	ec 4.2.2.18: Inulin fructotransferase (DFA-III-forming).
pdb deposition date	2006-10-09

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF18835	Beta_helix_2	Beta helix repeat of Inulin fructotransferase

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.160.20.10	Mainly Beta	3 Solenoid	Pectate Lyase C-like	Single-stranded right-handed beta-helix, Pectin lyase-like	2inuA00

4XOTA 1OFLA 1OFMA 1OGMX 2VJIA 4U49A 2BSPA 4C2LA 1O8LA 2X6WA 4OJOA 4XQFA 1BN8A 2VBEA 3VMVA 3T9GA 4XORA 4YZQA 4URRA 4YZXA 4XN3A 2NZMA 3GQ8A 2VBKA 2PYGA 1IA5A 3GRHA 2INVA 2O17A 2Z8GA 4OJ5A 4W8TA 2UVEA 1PLUA 2O1DA 4XKWA 1KTWA 2X6XA 1JRGA 2VJJA 1O8EA 4XONA 2EWEA 2X3HA 4OZZA 5C1CA 1O88A 4MXNA 3ZSCA 4W8QA 4XMYA 3VMWA 4XM3A 1XG2A 1O8HA 3WWGA 1CZFA 3VSUA 5AMVA 4NK8A 1O8KA 2O0VA 1DBGA 1NHCA 3GQ9A 4YELA 2NT6A 3B4NA 1O8JA 2NTPA 3JURA 1EE6A 2X85A 2ODLA 1KCDA 3EQOA 2PYHA 4YZ0A 4XNFA 2NT9A 4AVZA 4EW9A 3B8YA 4Z06A 1IB4A 4XR6A 3FY3A 3UW0A 1IDJA 3GQAA 3B90A 3LMWA 1QCXA 4MR0A 4XLEA 4I84A 2NTBA 1K5CA 2INUA 4NK6A 4HWVA 2NTQA 1HG8A 4XOPA 4Z05A 4XLFA 1PXZA 2UVFA 1O8DA 1PE9A 2QX3A 1O8MA 2IQ7A 4XLAA 1WMRA 3GQ7A 2PECA 1QJVA 3VSTA 1AIRA 3VSVA 1H80A 2QXZA 1KCCA 4XL9A 2O0WA 2NSTA 4OJPA 4XLHA 4W8RA 4YEJA 3ZPPA 1X0CA 1RWRA 1JTAA 1DBOA 1OGOX 3EQNA 4PMHA 4W8SA 4XLCA 1OOCA 2O04A 4OJ6A 4XKVA 1IDKA 4Z03A 5C1EA 1RU4A 1O8IA 1VBLA 2X6YA 2VBMA 1GQ8A 3KRGA 1BHEA 1O8FA 4U4BA 4XN0A 4YZAA 2QY1A 4OZYA 3SUCA 2NSPA 4OJLA 1O8GA 1RMGA
chains in the Genus database with same CATH superfamily

4XOTA 1OFLA 1WXRA 1OFMA 1EZGA 1OGMX 2VJIA 3TH0A 1TYXA 3LYCA 3LJYA 4U49A 1TSPA 2XT2A 2BSPA 4C2LA 1O8LA 2X6WA 4OJOA 2XT4A 4OPWA 4XQFA 1BN8A 2BM6A 2O6WA 2VBEA 3VMVA 1LLWA 3T9GA 2W7ZA 4XORA 4YZQA 4URRA 4YZXA 4XN3A 2NZMA 3GQ8A 1OFEA 1K4ZA 2VBKA 2PYGA 1IA5A 3DU1X 3GRHA 1QA3A 2INVA 2O17A 2Z8GA 4OJ5A 4W8TA 1PLUA 2UVEA 3SQVA 2O1DA 4XKWA 1KTWA 2BM4A 3PSSA 2X6XA 1JRGA 3N6ZA 2VJJA 1O8EA 4XONA 2EWEA 2X3HA 4OZZA 4YCQA 5C1CA 1O88A 4MXNA 3ZSCA 2VFQA 4V02C 4W8QA 1K8FA 1LM1A 4XMYA 1DABA 3RIQA 3NAWA 3VMWA 4JRAC 1XG2A 1HF2A 1O8HA 1QQ1A 2BM5A 4XM3A 3WWGA 2VFPA 2XTYA 4YEIA 2XC1A 1CZFA 3H09A 3VSUA 2XTXA 5AMVA 4NK8A 1O8KA 2O0VA 1DBGA 4YC5A 1NHCA 3GQ9A 4YELA 2NT6A 3B4NA 1O8JA 1QA2A 2NTPA 3JURA 4YDTA 1TYWA 1EE6A 2VFMA 2X85A 2IOUG 1TYVA 2ODLA 3BH6B 5JLVC 1KCDA 2YUHA 3EQOA 2PYHA 2VFOA 3PSZA 4YZ0A 3AK5A 2BX6A 3BH7B 4XNFA 3PETA 2NT9A 2B0RA 4AVZA 4EW9A 3B8YA 4Z06A 1IB4A 4XR6A 3FY3A 3UW0A 1IDJA 3GQAA 2VFNA 3P4GA 3B90A 3LMWA 2F3LA 1QCXA 2V5IA 3SY2A 1L1IA 3N90A 4MR0A 4XLEA 4I84A 2NTBA 1K5CA 2INUA 4NK6A 4HWVA 2NTQA 1HG8A 4XOPA 4Z05A 2G0YA 4XLFA 1PXZA 2UVFA 3SZEA 2J8IA 4OM9A 1O8DA 1PE9A 2QX3A 1O8MA 2IQ7A 4XLAA 2BM7A 3NB2A 1WMRA 3GQ7A 3SYJA 4YFOA 2PECA 1QJVA 3VSTA 1AIRA 3VSVA 1H80A 2QXZA 1KCCA 4XL9A 2O0WA 1QRCA 1KQ5A 2NSTA 2XTWA 4OJPA 4XLHA 5DNSA 3ML3A 4W8RA 4KH3A 4YEJA 2J8KA 3ZPPA 1X0CA 1RWRA 1JTAA 5JMCB 1DBOA 1OGOX 1QRBA 1EA0A 3EQNA 4PMHA 1OFDA 4W8SA 4XLCA 1OOCA 2O04A 4OJ6A 4XKVA 1IDKA 4Z03A 1LLZA 5C1EA 1CLWA 1RU4A 1O8IA 1TYUA 1VBLA 2VBMA 2X6YA 1GQ8A 3KRGA 1QA1A 1BHEA 1O8FA 4U4BA 4XN0A 4YZAA 2QY1A 2QYUA 3JX8A 4OZYA 2NSPA 4OJLA 3SUCA 2QZAA 1O8GA 1RMGA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 4XOT A;  1OFL A;  1OFM A;  1OGM X;  2VJI A;  4U49 A;  2BSP A;  4C2L A;  1O8L A;  2X6W A;  4OJO A;  4XQF A;  1BN8 A;  2VBE A;  3VMV A;  3T9G A;  4XOR A;  4YZQ A;  4URR A;  4YZX A;  4XN3 A;  2NZM A;  3GQ8 A;  2VBK A;  2PYG A;  1IA5 A;  3GRH A;  2INV A;  2O17 A;  2Z8G A;  4OJ5 A;  4W8T A;  2UVE A;  1PLU A;  2O1D A;  4XKW A;  1KTW A;  2X6X A;  1JRG A;  2VJJ A;  1O8E A;  4XON A;  2EWE A;  2X3H A;  4OZZ A;  5C1C A;  1O88 A;  4MXN A;  3ZSC A;  4W8Q A;  4XMY A;  3VMW A;  4XM3 A;  1XG2 A;  1O8H A;  3WWG A;  1CZF A;  3VSU A;  5AMV A;  4NK8 A;  1O8K A;  2O0V A;  1DBG A;  1NHC A;  3GQ9 A;  4YEL A;  2NT6 A;  3B4N A;  1O8J A;  2NTP A;  3JUR A;  1EE6 A;  2X85 A;  2ODL A;  1KCD A;  3EQO A;  2PYH A;  4YZ0 A;  4XNF A;  2NT9 A;  4AVZ A;  4EW9 A;  3B8Y A;  4Z06 A;  1IB4 A;  4XR6 A;  3FY3 A;  3UW0 A;  1IDJ A;  3GQA A;  3B90 A;  3LMW A;  1QCX A;  4MR0 A;  4XLE A;  4I84 A;  2NTB A;  1K5C A;  2INU A;  4NK6 A;  4HWV A;  2NTQ A;  1HG8 A;  4XOP A;  4Z05 A;  4XLF A;  1PXZ A;  2UVF A;  1O8D A;  1PE9 A;  2QX3 A;  1O8M A;  2IQ7 A;  4XLA A;  1WMR A;  3GQ7 A;  2PEC A;  1QJV A;  3VST A;  1AIR A;  3VSV A;  1H80 A;  2QXZ A;  1KCC A;  4XL9 A;  2O0W A;  2NST A;  4OJP A;  4XLH A;  4W8R A;  4YEJ A;  3ZPP A;  1X0C A;  1RWR A;  1JTA A;  1DBO A;  1OGO X;  3EQN A;  4PMH A;  4W8S A;  4XLC A;  1OOC A;  2O04 A;  4OJ6 A;  4XKV A;  1IDK A;  4Z03 A;  5C1E A;  1RU4 A;  1O8I A;  1VBL A;  2X6Y A;  2VBM A;  1GQ8 A;  3KRG A;  1BHE A;  1O8F A;  4U4B A;  4XN0 A;  4YZA A;  2QY1 A;  4OZY A;  3SUC A;  2NSP A;  4OJL A;  1O8G A;  1RMG A; 
#chains in the Genus database with same CATH topology
 4XOT A;  1OFL A;  1WXR A;  1OFM A;  1EZG A;  1OGM X;  2VJI A;  3TH0 A;  1TYX A;  3LYC A;  3LJY A;  4U49 A;  1TSP A;  2XT2 A;  2BSP A;  4C2L A;  1O8L A;  2X6W A;  4OJO A;  2XT4 A;  4OPW A;  4XQF A;  1BN8 A;  2BM6 A;  2O6W A;  2VBE A;  3VMV A;  1LLW A;  3T9G A;  2W7Z A;  4XOR A;  4YZQ A;  4URR A;  4YZX A;  4XN3 A;  2NZM A;  3GQ8 A;  1OFE A;  1K4Z A;  2VBK A;  2PYG A;  1IA5 A;  3DU1 X;  3GRH A;  1QA3 A;  2INV A;  2O17 A;  2Z8G A;  4OJ5 A;  4W8T A;  1PLU A;  2UVE A;  3SQV A;  2O1D A;  4XKW A;  1KTW A;  2BM4 A;  3PSS A;  2X6X A;  1JRG A;  3N6Z A;  2VJJ A;  1O8E A;  4XON A;  2EWE A;  2X3H A;  4OZZ A;  4YCQ A;  5C1C A;  1O88 A;  4MXN A;  3ZSC A;  2VFQ A;  4V02 C;  4W8Q A;  1K8F A;  1LM1 A;  4XMY A;  1DAB A;  3RIQ A;  3NAW A;  3VMW A;  4JRA C;  1XG2 A;  1HF2 A;  1O8H A;  1QQ1 A;  2BM5 A;  4XM3 A;  3WWG A;  2VFP A;  2XTY A;  4YEI A;  2XC1 A;  1CZF A;  3H09 A;  3VSU A;  2XTX A;  5AMV A;  4NK8 A;  1O8K A;  2O0V A;  1DBG A;  4YC5 A;  1NHC A;  3GQ9 A;  4YEL A;  2NT6 A;  3B4N A;  1O8J A;  1QA2 A;  2NTP A;  3JUR A;  4YDT A;  1TYW A;  1EE6 A;  2VFM A;  2X85 A;  2IOU G;  1TYV A;  2ODL A;  3BH6 B;  5JLV C;  1KCD A;  2YUH A;  3EQO A;  2PYH A;  2VFO A;  3PSZ A;  4YZ0 A;  3AK5 A;  2BX6 A;  3BH7 B;  4XNF A;  3PET A;  2NT9 A;  2B0R A;  4AVZ A;  4EW9 A;  3B8Y A;  4Z06 A;  1IB4 A;  4XR6 A;  3FY3 A;  3UW0 A;  1IDJ A;  3GQA A;  2VFN A;  3P4G A;  3B90 A;  3LMW A;  2F3L A;  1QCX A;  2V5I A;  3SY2 A;  1L1I A;  3N90 A;  4MR0 A;  4XLE A;  4I84 A;  2NTB A;  1K5C A;  2INU A;  4NK6 A;  4HWV A;  2NTQ A;  1HG8 A;  4XOP A;  4Z05 A;  2G0Y A;  4XLF A;  1PXZ A;  2UVF A;  3SZE A;  2J8I A;  4OM9 A;  1O8D A;  1PE9 A;  2QX3 A;  1O8M A;  2IQ7 A;  4XLA A;  2BM7 A;  3NB2 A;  1WMR A;  3GQ7 A;  3SYJ A;  4YFO A;  2PEC A;  1QJV A;  3VST A;  1AIR A;  3VSV A;  1H80 A;  2QXZ A;  1KCC A;  4XL9 A;  2O0W A;  1QRC A;  1KQ5 A;  2NST A;  2XTW A;  4OJP A;  4XLH A;  5DNS A;  3ML3 A;  4W8R A;  4KH3 A;  4YEJ A;  2J8K A;  3ZPP A;  1X0C A;  1RWR A;  1JTA A;  5JMC B;  1DBO A;  1OGO X;  1QRB A;  1EA0 A;  3EQN A;  4PMH A;  1OFD A;  4W8S A;  4XLC A;  1OOC A;  2O04 A;  4OJ6 A;  4XKV A;  1IDK A;  4Z03 A;  1LLZ A;  5C1E A;  1CLW A;  1RU4 A;  1O8I A;  1TYU A;  1VBL A;  2VBM A;  2X6Y A;  1GQ8 A;  3KRG A;  1QA1 A;  1BHE A;  1O8F A;  4U4B A;  4XN0 A;  4YZA A;  2QY1 A;  2QYU A;  3JX8 A;  4OZY A;  2NSP A;  4OJL A;  3SUC A;  2QZA A;  1O8G A;  1RMG A; 
#chains in the Genus database with same CATH homology
 4XOT A;  1OFL A;  1OFM A;  1OGM X;  2VJI A;  4U49 A;  2BSP A;  4C2L A;  1O8L A;  2X6W A;  4OJO A;  4XQF A;  1BN8 A;  2VBE A;  3VMV A;  3T9G A;  4XOR A;  4YZQ A;  4URR A;  4YZX A;  4XN3 A;  2NZM A;  3GQ8 A;  2VBK A;  2PYG A;  1IA5 A;  3GRH A;  2INV A;  2O17 A;  2Z8G A;  4OJ5 A;  4W8T A;  2UVE A;  1PLU A;  2O1D A;  4XKW A;  1KTW A;  2X6X A;  1JRG A;  2VJJ A;  1O8E A;  4XON A;  2EWE A;  2X3H A;  4OZZ A;  5C1C A;  1O88 A;  4MXN A;  3ZSC A;  4W8Q A;  4XMY A;  3VMW A;  4XM3 A;  1XG2 A;  1O8H A;  3WWG A;  1CZF A;  3VSU A;  5AMV A;  4NK8 A;  1O8K A;  2O0V A;  1DBG A;  1NHC A;  3GQ9 A;  4YEL A;  2NT6 A;  3B4N A;  1O8J A;  2NTP A;  3JUR A;  1EE6 A;  2X85 A;  2ODL A;  1KCD A;  3EQO A;  2PYH A;  4YZ0 A;  4XNF A;  2NT9 A;  4AVZ A;  4EW9 A;  3B8Y A;  4Z06 A;  1IB4 A;  4XR6 A;  3FY3 A;  3UW0 A;  1IDJ A;  3GQA A;  3B90 A;  3LMW A;  1QCX A;  4MR0 A;  4XLE A;  4I84 A;  2NTB A;  1K5C A;  2INU A;  4NK6 A;  4HWV A;  2NTQ A;  1HG8 A;  4XOP A;  4Z05 A;  4XLF A;  1PXZ A;  2UVF A;  1O8D A;  1PE9 A;  2QX3 A;  1O8M A;  2IQ7 A;  4XLA A;  1WMR A;  3GQ7 A;  2PEC A;  1QJV A;  3VST A;  1AIR A;  3VSV A;  1H80 A;  2QXZ A;  1KCC A;  4XL9 A;  2O0W A;  2NST A;  4OJP A;  4XLH A;  4W8R A;  4YEJ A;  3ZPP A;  1X0C A;  1RWR A;  1JTA A;  1DBO A;  1OGO X;  3EQN A;  4PMH A;  4W8S A;  4XLC A;  1OOC A;  2O04 A;  4OJ6 A;  4XKV A;  1IDK A;  4Z03 A;  5C1E A;  1RU4 A;  1O8I A;  1VBL A;  2X6Y A;  2VBM A;  1GQ8 A;  3KRG A;  1BHE A;  1O8F A;  4U4B A;  4XN0 A;  4YZA A;  2QY1 A;  4OZY A;  3SUC A;  2NSP A;  4OJL A;  1O8G A;  1RMG A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

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#similar chains, but unknotted
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2INUA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations