1HDLA

Lekti domain one
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
55
structure length
55
Chain Sequence
KNEDQEMCHEFQAFMKNGKLFCPQDKKFFQSLDGIMFINKCATCKMILEKEAKSQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Putative serine proteinase inhibitor
source organism Homo sapiens
publication title Homologous Proteins with Different Folds: The Three-Dimensional Structures of Domains 1 and 6 of the Multiple Kazal-Type Inhibitor Lekti
pubmed doi rcsb
molecule keywords SERINE PROTEINASE INHIBITOR LEKTI
total genus 12
structure length 55
sequence length 55
ec nomenclature
pdb deposition date 2000-11-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1hdlA00
1LR8A 1SGYI 2KMQA 1SGPI 1CT0I 1CT4I 1MT1A 2SGEI 1Y1BA 2XRCA 3TJQA 2NU1I 1OVOA 1DS3I 1CGII 2NU0I 1SGQI 2M5XA 1Z7KB 2JYYA 2V53A 1TIHA 1PCEA 1OMTA 3B4VC 4GI3C 2QQCA 1OMUA 1CSOI 2NU4I 2OVOA 1SGDI 2KMRA 1HJAI 2BUSA 2NU3I 1IY5A 5JHWC 1AN1I 2B0UC 3SEKC 1LR9A 2KMPA 1R0RI 2LEOA 3QTLD 2ARPF 1DS2I 2SGPI 1TURA 1HDLA 2P6AC 1BUSA 1BMOA 2SGDI 1M8BA 2GKTI 2ERWA 4HGUA 1NUBA 1M8CA 1PPFI 2GKRI 5DAEA 1SGEI 4SGBI 1H0ZA 2SGFI 3SGQI 3OVOA 2KCXA 1Y1CA 1IY6A 1FYBA 1YU6C 1OYVI 1HPTA 1IW4A 2WCYA 1LR7A 1CE3A 1N13A 3SGBI 2N17A 2SGQI 1UUCA 2NU2I 2GKVA 2JXDA 1TGSI 2QQDA 2N52A 1PJUA 1SGRI 1TUSA 2KMOA 1UVFA 2JZMA 4OVOA 1SGNI 1CHOI 1CT2I 1YTPA 2N71A 2F3CI 1TBQR 3HH2C 1CGJI 1UVGA 1TBRR 1KMAA
chains in the Genus database with same CATH superfamily
5FUVA 1LR8A 1FAQA 2VRWB 1SGYI 1FARA 3VDPA 1KBFA 2KMQA 1SGPI 4UXJA 1CT0I 2ORWA 1XBTA 1Z2IA 1CT4I 1K7TA 1MT1A 2L7XA 1UHAA 2SGEI 1Y1BA 2XRCA 3RU0A 3TJQA 1KBEA 2NU1I 1OVOA 2ODDA 3QWPA 1DS3I 1CGII 1S20A 2NU0I 3TOAA 4L9MA 5EX0A 2W0TA 1SGQI 1PTQA 1TBNA 3KY9A 1MJAA 2M5XA 1Z7KB 3E2IA 3UGLA 4E1RA 2JYYA 1XX6A 2X52A 3TO7A 2V53A 3GOXA 3TOBA 3R5BA 1TIHA 1PCEA 1OMTA 3B4VC 1V1IA 3E59A 2QQCA 4GI3C 1OMUA 1CSOI 2NU4I 5HI7A 2OVOA 1SGDI 1K7VA 2KMRA 2DKVA 3FSYA 1HJAI 5E3RA 2BUSA 4AMLA 3R5DA 1WGCA 2NU3I 2UVOA 5JHWC 1IY5A 2QPOA 1NXUA 1AN1I 2B0UC 2Y0MA 3SEKC 1LR9A 1ULMA 2KMPA 2ROWA 2OD1A 3TO6A 1R0RI 3OXFA 2LUYA 2LEOA 1MJ9A 3QTLD 1MJBA 2ARPF 4MPIA 1DS2I 1ULKA 2SGPI 2WVJA 3D00A 1TURA 5CCMA 2ENNA 1K7UA 1VDDA 5E3QA 3FC3A 3UFFA 4E1PA 2GIVA 1WKXA 3OXLA 1HDLA 1FY7A 2CJSC 2P6AC 1BUSA 2FNFX 1HEVA 1BMOA 2SGDI 1M8BA 2ERWA 2GKTI 1PTRA 2J9RA 1NUBA 3OXGA 2E73A 4HGUA 4JCVE 1M8CA 3BJIA 3R5CA 2L8EA 1PPFI 2GKRI 2QQ0A 2QQEA 1SGEI 5DAEA 2V1CA 9WGAA 5CCLA 2RIJA 1XA6A 4SGBI 3FSXA 3R5AA 3UGIA 4FKDA 1H0ZA 2DB6A 2CWGA 4UXHA 4A24A 1R79A 2SGFI 3SGQI 2OU2A 4WP4A 3TO9A 3OVOA 1TOTA 1Y1CA 2KCXA 2ORVA 1IY6A 1YU6C 1FYBA 3UEJA 5FUYA 1OYVI 2J87A 2RC4A 1RFHA 7WGAA 1WGTA 1HPTA 5J8FA 1IW4A 2B8TA 1P9ZA 1U5KA 3CXLA 2WCYA 4B6DA 2X3TA 5EX3A 1LR7A 4DNCA 1CE3A 3UEYA 2A20A 2JW6A 1P9GA 4UXIA 1N13A 2GVIA 3SGBI 2N17A 5FUWA 2E5RA 1X74A 2SGQI 1UUCA 3VE5A 2NU2I 1W3SA 2ELIA 2GKVA 3QAHA 2UZ3A 2CWHA 2PQ8A 2JXDA 1TGSI 1W4RA 2QQDA 3UOEA 3VDUA 5HQ8A 2N52A 1PJUA 3UGDA 2K9HA 2V1CC 1V1HA 2LB7A 1SGRI 3PDNA 2JA1A 1TUSA 1TBOA 1UVFA 2KMOA 2JZMA 2CWFA 4OVOA 1SGNI 1CHOI 2YQPA 5FUXA 1Q9BA 1CT2I 5E3PA 1YTPA 2ENZA 1X4SA 3MEKA 1Y8FA 2N71A 2WGCA 2N1AB 5J8CA 2OZUA 2F3CI 1TBQR 2DIPA 3HH2C 3OL0A 1WTJA 1CGJI 1UVGA 1TBRR 1KMAA 2YUUA 1ULNA
chains in the Genus database with same CATH topology
5FUVA 1LR8A 1FAQA 2VRWB 1SGYI 1FARA 3VDPA 1KBFA 2KMQA 1SGPI 4UXJA 1CT0I 2ORWA 1XBTA 1CT4I 1MT1A 2L7XA 2SGEI 1Y1BA 2XRCA 3RU0A 3TJQA 1KBEA 2NU1I 1OVOA 2ODDA 3QWPA 1DS3I 1CGII 2NU0I 4L9MA 5EX0A 2W0TA 1SGQI 1PTQA 1TBNA 3KY9A 2M5XA 1Z7KB 3E2IA 3UGLA 4E1RA 2JYYA 1XX6A 2V53A 3GOXA 1TIHA 1PCEA 1OMTA 3B4VC 1V1IA 3E59A 2QQCA 4GI3C 1OMUA 1CSOI 2NU4I 5HI7A 2OVOA 1SGDI 2KMRA 1HJAI 2BUSA 2NU3I 1IY5A 5JHWC 2QPOA 1AN1I 2B0UC 3SEKC 1LR9A 2KMPA 2ROWA 2OD1A 1R0RI 3OXFA 2LUYA 2LEOA 3QTLD 2ARPF 1DS2I 2SGPI 2WVJA 3D00A 1TURA 5CCMA 2ENNA 1VDDA 3FC3A 3UFFA 4E1PA 3OXLA 1HDLA 2CJSC 2P6AC 1BUSA 2FNFX 1BMOA 2SGDI 1M8BA 2ERWA 2GKTI 1PTRA 2J9RA 1NUBA 3OXGA 2E73A 4HGUA 4JCVE 1M8CA 3BJIA 2L8EA 1PPFI 2GKRI 2QQ0A 2QQEA 1SGEI 5DAEA 2V1CA 5CCLA 1XA6A 4SGBI 3UGIA 4FKDA 1H0ZA 2DB6A 4UXHA 4A24A 1R79A 2SGFI 3SGQI 3OVOA 1TOTA 1Y1CA 2KCXA 2ORVA 1IY6A 1YU6C 1FYBA 3UEJA 5FUYA 1OYVI 2J87A 1RFHA 1HPTA 1IW4A 2B8TA 1U5KA 3CXLA 2WCYA 4B6DA 5EX3A 1LR7A 1CE3A 3UEYA 2A20A 2JW6A 4UXIA 1N13A 2GVIA 3SGBI 2N17A 5FUWA 2E5RA 1X74A 2SGQI 1UUCA 3VE5A 2NU2I 1W3SA 2ELIA 2GKVA 2UZ3A 2JXDA 1TGSI 1W4RA 2QQDA 3VDUA 5HQ8A 2N52A 1PJUA 3UGDA 2K9HA 2V1CC 1V1HA 1SGRI 3PDNA 2JA1A 1TUSA 1TBOA 1UVFA 2KMOA 2JZMA 4OVOA 1SGNI 1CHOI 2YQPA 5FUXA 1CT2I 1YTPA 2ENZA 1X4SA 3MEKA 1Y8FA 2N71A 2N1AB 2F3CI 1TBQR 2DIPA 3HH2C 3OL0A 1CGJI 1UVGA 1TBRR 1KMAA 2YUUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LR8 A;  1SGY I;  2KMQ A;  1SGP I;  1CT0 I;  1CT4 I;  1MT1 A;  2SGE I;  1Y1B A;  2XRC A;  3TJQ A;  2NU1 I;  1OVO A;  1DS3 I;  1CGI I;  2NU0 I;  1SGQ I;  2M5X A;  1Z7K B;  2JYY A;  2V53 A;  1TIH A;  1PCE A;  1OMT A;  3B4V C;  4GI3 C;  2QQC A;  1OMU A;  1CSO I;  2NU4 I;  2OVO A;  1SGD I;  2KMR A;  1HJA I;  2BUS A;  2NU3 I;  1IY5 A;  5JHW C;  1AN1 I;  2B0U C;  3SEK C;  1LR9 A;  2KMP A;  1R0R I;  2LEO A;  3QTL D;  2ARP F;  1DS2 I;  2SGP I;  1TUR A;  1HDL A;  2P6A C;  1BUS A;  1BMO A;  2SGD I;  1M8B A;  2GKT I;  2ERW A;  4HGU A;  1NUB A;  1M8C A;  1PPF I;  2GKR I;  5DAE A;  1SGE I;  4SGB I;  1H0Z A;  2SGF I;  3SGQ I;  3OVO A;  2KCX A;  1Y1C A;  1IY6 A;  1FYB A;  1YU6 C;  1OYV I;  1HPT A;  1IW4 A;  2WCY A;  1LR7 A;  1CE3 A;  1N13 A;  3SGB I;  2N17 A;  2SGQ I;  1UUC A;  2NU2 I;  2GKV A;  2JXD A;  1TGS I;  2QQD A;  2N52 A;  1PJU A;  1SGR I;  1TUS A;  2KMO A;  1UVF A;  2JZM A;  4OVO A;  1SGN I;  1CHO I;  1CT2 I;  1YTP A;  2N71 A;  2F3C I;  1TBQ R;  3HH2 C;  1CGJ I;  1UVG A;  1TBR R;  1KMA A; 
#chains in the Genus database with same CATH topology
 5FUV A;  1LR8 A;  1FAQ A;  2VRW B;  1SGY I;  1FAR A;  3VDP A;  1KBF A;  2KMQ A;  1SGP I;  4UXJ A;  1CT0 I;  2ORW A;  1XBT A;  1Z2I A;  1CT4 I;  1K7T A;  1MT1 A;  2L7X A;  1UHA A;  2SGE I;  1Y1B A;  2XRC A;  3RU0 A;  3TJQ A;  1KBE A;  2NU1 I;  1OVO A;  2ODD A;  3QWP A;  1DS3 I;  1CGI I;  1S20 A;  2NU0 I;  3TOA A;  4L9M A;  5EX0 A;  2W0T A;  1SGQ I;  1PTQ A;  1TBN A;  3KY9 A;  1MJA A;  2M5X A;  1Z7K B;  3E2I A;  3UGL A;  4E1R A;  2JYY A;  1XX6 A;  2X52 A;  3TO7 A;  2V53 A;  3GOX A;  3TOB A;  3R5B A;  1TIH A;  1PCE A;  1OMT A;  3B4V C;  1V1I A;  3E59 A;  2QQC A;  4GI3 C;  1OMU A;  1CSO I;  2NU4 I;  5HI7 A;  2OVO A;  1SGD I;  1K7V A;  2KMR A;  2DKV A;  3FSY A;  1HJA I;  5E3R A;  2BUS A;  4AML A;  3R5D A;  1WGC A;  2NU3 I;  2UVO A;  5JHW C;  1IY5 A;  2QPO A;  1NXU A;  1AN1 I;  2B0U C;  2Y0M A;  3SEK C;  1LR9 A;  1ULM A;  2KMP A;  2ROW A;  2OD1 A;  3TO6 A;  1R0R I;  3OXF A;  2LUY A;  2LEO A;  1MJ9 A;  3QTL D;  1MJB A;  2ARP F;  4MPI A;  1DS2 I;  1ULK A;  2SGP I;  2WVJ A;  3D00 A;  1TUR A;  5CCM A;  2ENN A;  1K7U A;  1VDD A;  5E3Q A;  3FC3 A;  3UFF A;  4E1P A;  2GIV A;  1WKX A;  3OXL A;  1HDL A;  1FY7 A;  2CJS C;  2P6A C;  1BUS A;  2FNF X;  1HEV A;  1BMO A;  2SGD I;  1M8B A;  2ERW A;  2GKT I;  1PTR A;  2J9R A;  1NUB A;  3OXG A;  2E73 A;  4HGU A;  4JCV E;  1M8C A;  3BJI A;  3R5C A;  2L8E A;  1PPF I;  2GKR I;  2QQ0 A;  2QQE A;  1SGE I;  5DAE A;  2V1C A;  9WGA A;  5CCL A;  2RIJ A;  1XA6 A;  4SGB I;  3FSX A;  3R5A A;  3UGI A;  4FKD A;  1H0Z A;  2DB6 A;  2CWG A;  4UXH A;  4A24 A;  1R79 A;  2SGF I;  3SGQ I;  2OU2 A;  4WP4 A;  3TO9 A;  3OVO A;  1TOT A;  1Y1C A;  2KCX A;  2ORV A;  1IY6 A;  1YU6 C;  1FYB A;  3UEJ A;  5FUY A;  1OYV I;  2J87 A;  2RC4 A;  1RFH A;  7WGA A;  1WGT A;  1HPT A;  5J8F A;  1IW4 A;  2B8T A;  1P9Z A;  1U5K A;  3CXL A;  2WCY A;  4B6D A;  2X3T A;  5EX3 A;  1LR7 A;  4DNC A;  1CE3 A;  3UEY A;  2A20 A;  2JW6 A;  1P9G A;  4UXI A;  1N13 A;  2GVI A;  3SGB I;  2N17 A;  5FUW A;  2E5R A;  1X74 A;  2SGQ I;  1UUC A;  3VE5 A;  2NU2 I;  1W3S A;  2ELI A;  2GKV A;  3QAH A;  2UZ3 A;  2CWH A;  2PQ8 A;  2JXD A;  1TGS I;  1W4R A;  2QQD A;  3UOE A;  3VDU A;  5HQ8 A;  2N52 A;  1PJU A;  3UGD A;  2K9H A;  2V1C C;  1V1H A;  2LB7 A;  1SGR I;  3PDN A;  2JA1 A;  1TUS A;  1TBO A;  1UVF A;  2KMO A;  2JZM A;  2CWF A;  4OVO A;  1SGN I;  1CHO I;  2YQP A;  5FUX A;  1Q9B A;  1CT2 I;  5E3P A;  1YTP A;  2ENZ A;  1X4S A;  3MEK A;  1Y8F A;  2N71 A;  2WGC A;  2N1A B;  5J8C A;  2OZU A;  2F3C I;  1TBQ R;  2DIP A;  3HH2 C;  3OL0 A;  1WTJ A;  1CGJ I;  1UVG A;  1TBR R;  1KMA A;  2YUU A;  1ULN A; 
#chains in the Genus database with same CATH homology
 5FUV A;  1LR8 A;  1FAQ A;  2VRW B;  1SGY I;  1FAR A;  3VDP A;  1KBF A;  2KMQ A;  1SGP I;  4UXJ A;  1CT0 I;  2ORW A;  1XBT A;  1CT4 I;  1MT1 A;  2L7X A;  2SGE I;  1Y1B A;  2XRC A;  3RU0 A;  3TJQ A;  1KBE A;  2NU1 I;  1OVO A;  2ODD A;  3QWP A;  1DS3 I;  1CGI I;  2NU0 I;  4L9M A;  5EX0 A;  2W0T A;  1SGQ I;  1PTQ A;  1TBN A;  3KY9 A;  2M5X A;  1Z7K B;  3E2I A;  3UGL A;  4E1R A;  2JYY A;  1XX6 A;  2V53 A;  3GOX A;  1TIH A;  1PCE A;  1OMT A;  3B4V C;  1V1I A;  3E59 A;  2QQC A;  4GI3 C;  1OMU A;  1CSO I;  2NU4 I;  5HI7 A;  2OVO A;  1SGD I;  2KMR A;  1HJA I;  2BUS A;  2NU3 I;  1IY5 A;  5JHW C;  2QPO A;  1AN1 I;  2B0U C;  3SEK C;  1LR9 A;  2KMP A;  2ROW A;  2OD1 A;  1R0R I;  3OXF A;  2LUY A;  2LEO A;  3QTL D;  2ARP F;  1DS2 I;  2SGP I;  2WVJ A;  3D00 A;  1TUR A;  5CCM A;  2ENN A;  1VDD A;  3FC3 A;  3UFF A;  4E1P A;  3OXL A;  1HDL A;  2CJS C;  2P6A C;  1BUS A;  2FNF X;  1BMO A;  2SGD I;  1M8B A;  2ERW A;  2GKT I;  1PTR A;  2J9R A;  1NUB A;  3OXG A;  2E73 A;  4HGU A;  4JCV E;  1M8C A;  3BJI A;  2L8E A;  1PPF I;  2GKR I;  2QQ0 A;  2QQE A;  1SGE I;  5DAE A;  2V1C A;  5CCL A;  1XA6 A;  4SGB I;  3UGI A;  4FKD A;  1H0Z A;  2DB6 A;  4UXH A;  4A24 A;  1R79 A;  2SGF I;  3SGQ I;  3OVO A;  1TOT A;  1Y1C A;  2KCX A;  2ORV A;  1IY6 A;  1YU6 C;  1FYB A;  3UEJ A;  5FUY A;  1OYV I;  2J87 A;  1RFH A;  1HPT A;  1IW4 A;  2B8T A;  1U5K A;  3CXL A;  2WCY A;  4B6D A;  5EX3 A;  1LR7 A;  1CE3 A;  3UEY A;  2A20 A;  2JW6 A;  4UXI A;  1N13 A;  2GVI A;  3SGB I;  2N17 A;  5FUW A;  2E5R A;  1X74 A;  2SGQ I;  1UUC A;  3VE5 A;  2NU2 I;  1W3S A;  2ELI A;  2GKV A;  2UZ3 A;  2JXD A;  1TGS I;  1W4R A;  2QQD A;  3VDU A;  5HQ8 A;  2N52 A;  1PJU A;  3UGD A;  2K9H A;  2V1C C;  1V1H A;  1SGR I;  3PDN A;  2JA1 A;  1TUS A;  1TBO A;  1UVF A;  2KMO A;  2JZM A;  4OVO A;  1SGN I;  1CHO I;  2YQP A;  5FUX A;  1CT2 I;  1YTP A;  2ENZ A;  1X4S A;  3MEK A;  1Y8F A;  2N71 A;  2N1A B;  2F3C I;  1TBQ R;  2DIP A;  3HH2 C;  3OL0 A;  1CGJ I;  1UVG A;  1TBR R;  1KMA A;  2YUU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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