1HDLA

Lekti domain one
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
55
structure length
55
Chain Sequence
KNEDQEMCHEFQAFMKNGKLFCPQDKKFFQSLDGIMFINKCATCKMILEKEAKSQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords SERINE PROTEINASE INHIBITOR LEKTI
publication title Homologous Proteins with Different Folds: The Three-Dimensional Structures of Domains 1 and 6 of the Multiple Kazal-Type Inhibitor Lekti
pubmed doi rcsb
source organism Homo sapiens
molecule tags Putative serine proteinase inhibitor
total genus 12
structure length 55
sequence length 55
ec nomenclature
pdb deposition date 2000-11-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1hdlA00
3SEKC 2NU1I 2SGEI 2JXDA 1IW4A 1KMAA 1UVFA 1CT4I 1CGII 2KCXA 2KMPA 1DS3I 1LR9A 1NUBA 1M8BA 2B0UC 1LR7A 2N71A 2OVOA 1FYBA 2NU4I 2NU2I 4OVOA 3B4VC 1YU6C 1IY5A 1Y1BA 1BMOA 1HDLA 1CT2I 1TIHA 2SGPI 1OYVI 2XRCA 2V53A 1SGEI 2BUSA 2KMOA 1TBQR 1LR8A 1HJAI 2QQCA 1TURA 1SGPI 2SGFI 2SGDI 2F3CI 2P6AC 2SGQI 1CT0I 1OVOA 2JYYA 1PCEA 3QTLD 4SGBI 1CGJI 2NU0I 1AN1I 4HGUA 2GKVA 1N13A 1Z7KB 3SGQI 2JZMA 1TUSA 1TGSI 1PJUA 1CHOI 2GKTI 1CSOI 2M5XA 2KMQA 3TJQA 1SGQI 1H0ZA 1SGNI 1BUSA 1IY6A 1DS2I 5DAEA 3OVOA 1Y1CA 1OMUA 1R0RI 1MT1A 2ARPF 2ERWA 1OMTA 1UVGA 4GI3C 2WCYA 2N17A 2N52A 1SGYI 1YTPA 3HH2C 2KMRA 3SGBI 2LEOA 2QQDA 1SGDI 1SGRI 5JHWC 1M8CA 1UUCA 1HPTA 2GKRI 1PPFI 1TBRR 2NU3I 1CE3A
chains in the Genus database with same CATH superfamily
3UEJA 3SEKC 1XA6A 2NU1I 2SGEI 2JXDA 1IW4A 2V1CA 4L9MA 2WVJA 2YUUA 3TO9A 1FY7A 1UVFA 1KBEA 1CT4I 1CGII 1KMAA 2KCXA 3MEKA 1NXUA 3BJIA 2KMPA 1DS3I 1LR9A 2OD1A 1NUBA 1M8BA 2B0UC 2QQ0A 3UGDA 4B6DA 5FUVA 1LR7A 2N71A 2CJSC 1KBFA 2OVOA 1FYBA 2YQPA 2NU4I 2Y0MA 4A24A 2NU2I 2LB7A 1K7VA 3FSXA 4E1RA 5E3RA 4OVOA 3B4VC 1YU6C 1IY5A 1Y1BA 1BMOA 2LUYA 3TO6A 1R79A 2E73A 3E2IA 5EX3A 3R5BA 2JW6A 3TOBA 1TOTA 1HDLA 3OXGA 1CT2I 1TIHA 1WTJA 2SGPI 1OYVI 5EX0A 2CWGA 3RU0A 1WGCA 2J87A 1PTQA 2XRCA 1XX6A 2V53A 1SGEI 1ULKA 2CWHA 2OU2A 2V1CC 3UGIA 3TOAA 2GIVA 2BUSA 2DIPA 2ENZA 1TBQR 1W3SA 1Z2IA 1LR8A 2KMOA 3D00A 1HJAI 2QQCA 2E5RA 3E59A 1TURA 5E3QA 1SGPI 2SGFI 2L8EA 2SGDI 2F3CI 2DKVA 1P9ZA 3VDUA 1U5KA 2P6AC 3OXLA 5J8CA 2SGQI 3FSYA 1CT0I 2B8TA 1OVOA 1RFHA 2UVOA 2JYYA 1PCEA 3PDNA 3QTLD 5J8FA 1WGTA 4SGBI 1CGJI 1X4SA 2GVIA 5E3PA 2NU0I 1AN1I 1Q9BA 3QWPA 2A20A 5FUXA 4AMLA 4WP4A 7WGAA 4HGUA 4DNCA 1WKXA 2GKVA 1TBOA 1N13A 3OL0A 1Z7KB 3SGQI 2JZMA 4JCVE 1TUSA 4UXJA 2OZUA 1TGSI 1PJUA 1CHOI 1K7TA 2QPOA 2PQ8A 5CCLA 2X52A 1PTRA 3FC3A 2GKTI 4UXIA 1W4RA 2W0TA 1CSOI 2M5XA 3R5AA 2KMQA 2CWFA 1HEVA 1MJAA 2ORVA 1MJBA 5HI7A 3TJQA 1SGQI 1VDDA 5FUWA 1SGNI 1V1HA 3CXLA 3TO7A 1H0ZA 1ULNA 1BUSA 1IY6A 1DS2I 2FNFX 5DAEA 5FUYA 3OVOA 1UHAA 1Y1CA 1OMUA 1R0RI 3R5DA 3OXFA 4E1PA 1MT1A 1P9GA 2ROWA 1XBTA 1FAQA 2ARPF 5CCMA 2JA1A 2VRWB 3UOEA 2ERWA 1OMTA 1UVGA 2K9HA 1X74A 2ENNA 2RC4A 4GI3C 3VE5A 4FKDA 1Y8FA 2ORWA 2WCYA 1K7UA 2N17A 1SGYI 2N52A 3R5CA 1YTPA 2ODDA 2N1AB 3HH2C 1FARA 2KMRA 3SGBI 1MJ9A 9WGAA 5HQ8A 1S20A 2DB6A 2LEOA 4MPIA 3UEYA 2QQEA 3VDPA 2L7XA 2RIJA 2QQDA 1SGDI 3QAHA 1SGRI 2X3TA 5JHWC 2J9RA 1M8CA 1ULMA 1TBNA 1UUCA 1HPTA 2ELIA 3GOXA 2WGCA 2GKRI 1PPFI 1TBRR 4UXHA 2NU3I 3UFFA 1V1IA 2UZ3A 1CE3A 3UGLA 3KY9A
chains in the Genus database with same CATH topology
3UEJA 3SEKC 1XA6A 2NU1I 2SGEI 2JXDA 1IW4A 2V1CA 4L9MA 2WVJA 2YUUA 1KMAA 1UVFA 1KBEA 1CT4I 1CGII 2KCXA 3MEKA 3BJIA 2KMPA 1DS3I 1LR9A 2OD1A 1NUBA 1M8BA 2B0UC 2QQ0A 3UGDA 4B6DA 5FUVA 1LR7A 2N71A 2CJSC 1KBFA 2OVOA 1FYBA 2YQPA 2NU4I 4A24A 2NU2I 4E1RA 4OVOA 3B4VC 1YU6C 1IY5A 1Y1BA 1BMOA 2LUYA 1R79A 2E73A 3E2IA 5EX3A 2JW6A 1TOTA 1HDLA 3OXGA 1CT2I 1TIHA 3RU0A 2SGPI 1OYVI 5EX0A 2J87A 1PTQA 2XRCA 1XX6A 2V53A 1SGEI 3UGIA 2V1CC 2BUSA 2DIPA 2ENZA 1TBQR 1W3SA 2KMOA 1LR8A 3D00A 1HJAI 2QQCA 2E5RA 3E59A 1TURA 1SGPI 2SGFI 2L8EA 2SGDI 2F3CI 3VDUA 1U5KA 2P6AC 3OXLA 2SGQI 1CT0I 2B8TA 1OVOA 1RFHA 2JYYA 1PCEA 3PDNA 3QTLD 4SGBI 1CGJI 1X4SA 2GVIA 2NU0I 1AN1I 3QWPA 2A20A 5FUXA 4HGUA 2GKVA 1TBOA 1N13A 3OL0A 1Z7KB 3SGQI 2JZMA 4JCVE 1TUSA 4UXJA 1TGSI 1PJUA 1CHOI 2QPOA 5CCLA 1PTRA 3FC3A 2GKTI 4UXIA 1W4RA 2W0TA 1CSOI 2M5XA 2KMQA 2ORVA 5HI7A 3TJQA 1SGQI 1VDDA 5FUWA 1SGNI 1V1HA 3CXLA 1H0ZA 1BUSA 1IY6A 1DS2I 2FNFX 5DAEA 5FUYA 3OVOA 1Y1CA 1OMUA 1R0RI 3OXFA 4E1PA 1MT1A 2ROWA 1XBTA 1FAQA 2ARPF 5CCMA 2JA1A 2VRWB 2ERWA 1OMTA 1UVGA 2K9HA 1X74A 2ENNA 4GI3C 3VE5A 4FKDA 1Y8FA 2ORWA 2WCYA 2N17A 2N52A 1SGYI 1YTPA 2ODDA 2N1AB 3HH2C 1FARA 2KMRA 3SGBI 5HQ8A 2DB6A 2LEOA 3UEYA 2QQEA 3VDPA 2L7XA 2QQDA 1SGDI 1SGRI 5JHWC 2J9RA 1M8CA 1TBNA 1UUCA 1HPTA 2ELIA 3GOXA 2GKRI 1PPFI 1TBRR 4UXHA 2NU3I 3UFFA 1V1IA 2UZ3A 1CE3A 3UGLA 3KY9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SEK C;  2NU1 I;  2SGE I;  2JXD A;  1IW4 A;  1KMA A;  1UVF A;  1CT4 I;  1CGI I;  2KCX A;  2KMP A;  1DS3 I;  1LR9 A;  1NUB A;  1M8B A;  2B0U C;  1LR7 A;  2N71 A;  2OVO A;  1FYB A;  2NU4 I;  2NU2 I;  4OVO A;  3B4V C;  1YU6 C;  1IY5 A;  1Y1B A;  1BMO A;  1HDL A;  1CT2 I;  1TIH A;  2SGP I;  1OYV I;  2XRC A;  2V53 A;  1SGE I;  2BUS A;  2KMO A;  1TBQ R;  1LR8 A;  1HJA I;  2QQC A;  1TUR A;  1SGP I;  2SGF I;  2SGD I;  2F3C I;  2P6A C;  2SGQ I;  1CT0 I;  1OVO A;  2JYY A;  1PCE A;  3QTL D;  4SGB I;  1CGJ I;  2NU0 I;  1AN1 I;  4HGU A;  2GKV A;  1N13 A;  1Z7K B;  3SGQ I;  2JZM A;  1TUS A;  1TGS I;  1PJU A;  1CHO I;  2GKT I;  1CSO I;  2M5X A;  2KMQ A;  3TJQ A;  1SGQ I;  1H0Z A;  1SGN I;  1BUS A;  1IY6 A;  1DS2 I;  5DAE A;  3OVO A;  1Y1C A;  1OMU A;  1R0R I;  1MT1 A;  2ARP F;  2ERW A;  1OMT A;  1UVG A;  4GI3 C;  2WCY A;  2N17 A;  2N52 A;  1SGY I;  1YTP A;  3HH2 C;  2KMR A;  3SGB I;  2LEO A;  2QQD A;  1SGD I;  1SGR I;  5JHW C;  1M8C A;  1UUC A;  1HPT A;  2GKR I;  1PPF I;  1TBR R;  2NU3 I;  1CE3 A; 
#chains in the Genus database with same CATH topology
 3UEJ A;  3SEK C;  1XA6 A;  2NU1 I;  2SGE I;  2JXD A;  1IW4 A;  2V1C A;  4L9M A;  2WVJ A;  2YUU A;  3TO9 A;  1FY7 A;  1UVF A;  1KBE A;  1CT4 I;  1CGI I;  1KMA A;  2KCX A;  3MEK A;  1NXU A;  3BJI A;  2KMP A;  1DS3 I;  1LR9 A;  2OD1 A;  1NUB A;  1M8B A;  2B0U C;  2QQ0 A;  3UGD A;  4B6D A;  5FUV A;  1LR7 A;  2N71 A;  2CJS C;  1KBF A;  2OVO A;  1FYB A;  2YQP A;  2NU4 I;  2Y0M A;  4A24 A;  2NU2 I;  2LB7 A;  1K7V A;  3FSX A;  4E1R A;  5E3R A;  4OVO A;  3B4V C;  1YU6 C;  1IY5 A;  1Y1B A;  1BMO A;  2LUY A;  3TO6 A;  1R79 A;  2E73 A;  3E2I A;  5EX3 A;  3R5B A;  2JW6 A;  3TOB A;  1TOT A;  1HDL A;  3OXG A;  1CT2 I;  1TIH A;  1WTJ A;  2SGP I;  1OYV I;  5EX0 A;  2CWG A;  3RU0 A;  1WGC A;  2J87 A;  1PTQ A;  2XRC A;  1XX6 A;  2V53 A;  1SGE I;  1ULK A;  2CWH A;  2OU2 A;  2V1C C;  3UGI A;  3TOA A;  2GIV A;  2BUS A;  2DIP A;  2ENZ A;  1TBQ R;  1W3S A;  1Z2I A;  1LR8 A;  2KMO A;  3D00 A;  1HJA I;  2QQC A;  2E5R A;  3E59 A;  1TUR A;  5E3Q A;  1SGP I;  2SGF I;  2L8E A;  2SGD I;  2F3C I;  2DKV A;  1P9Z A;  3VDU A;  1U5K A;  2P6A C;  3OXL A;  5J8C A;  2SGQ I;  3FSY A;  1CT0 I;  2B8T A;  1OVO A;  1RFH A;  2UVO A;  2JYY A;  1PCE A;  3PDN A;  3QTL D;  5J8F A;  1WGT A;  4SGB I;  1CGJ I;  1X4S A;  2GVI A;  5E3P A;  2NU0 I;  1AN1 I;  1Q9B A;  3QWP A;  2A20 A;  5FUX A;  4AML A;  4WP4 A;  7WGA A;  4HGU A;  4DNC A;  1WKX A;  2GKV A;  1TBO A;  1N13 A;  3OL0 A;  1Z7K B;  3SGQ I;  2JZM A;  4JCV E;  1TUS A;  4UXJ A;  2OZU A;  1TGS I;  1PJU A;  1CHO I;  1K7T A;  2QPO A;  2PQ8 A;  5CCL A;  2X52 A;  1PTR A;  3FC3 A;  2GKT I;  4UXI A;  1W4R A;  2W0T A;  1CSO I;  2M5X A;  3R5A A;  2KMQ A;  2CWF A;  1HEV A;  1MJA A;  2ORV A;  1MJB A;  5HI7 A;  3TJQ A;  1SGQ I;  1VDD A;  5FUW A;  1SGN I;  1V1H A;  3CXL A;  3TO7 A;  1H0Z A;  1ULN A;  1BUS A;  1IY6 A;  1DS2 I;  2FNF X;  5DAE A;  5FUY A;  3OVO A;  1UHA A;  1Y1C A;  1OMU A;  1R0R I;  3R5D A;  3OXF A;  4E1P A;  1MT1 A;  1P9G A;  2ROW A;  1XBT A;  1FAQ A;  2ARP F;  5CCM A;  2JA1 A;  2VRW B;  3UOE A;  2ERW A;  1OMT A;  1UVG A;  2K9H A;  1X74 A;  2ENN A;  2RC4 A;  4GI3 C;  3VE5 A;  4FKD A;  1Y8F A;  2ORW A;  2WCY A;  1K7U A;  2N17 A;  1SGY I;  2N52 A;  3R5C A;  1YTP A;  2ODD A;  2N1A B;  3HH2 C;  1FAR A;  2KMR A;  3SGB I;  1MJ9 A;  9WGA A;  5HQ8 A;  1S20 A;  2DB6 A;  2LEO A;  4MPI A;  3UEY A;  2QQE A;  3VDP A;  2L7X A;  2RIJ A;  2QQD A;  1SGD I;  3QAH A;  1SGR I;  2X3T A;  5JHW C;  2J9R A;  1M8C A;  1ULM A;  1TBN A;  1UUC A;  1HPT A;  2ELI A;  3GOX A;  2WGC A;  2GKR I;  1PPF I;  1TBR R;  4UXH A;  2NU3 I;  3UFF A;  1V1I A;  2UZ3 A;  1CE3 A;  3UGL A;  3KY9 A; 
#chains in the Genus database with same CATH homology
 3UEJ A;  3SEK C;  1XA6 A;  2NU1 I;  2SGE I;  2JXD A;  1IW4 A;  2V1C A;  4L9M A;  2WVJ A;  2YUU A;  1KMA A;  1UVF A;  1KBE A;  1CT4 I;  1CGI I;  2KCX A;  3MEK A;  3BJI A;  2KMP A;  1DS3 I;  1LR9 A;  2OD1 A;  1NUB A;  1M8B A;  2B0U C;  2QQ0 A;  3UGD A;  4B6D A;  5FUV A;  1LR7 A;  2N71 A;  2CJS C;  1KBF A;  2OVO A;  1FYB A;  2YQP A;  2NU4 I;  4A24 A;  2NU2 I;  4E1R A;  4OVO A;  3B4V C;  1YU6 C;  1IY5 A;  1Y1B A;  1BMO A;  2LUY A;  1R79 A;  2E73 A;  3E2I A;  5EX3 A;  2JW6 A;  1TOT A;  1HDL A;  3OXG A;  1CT2 I;  1TIH A;  3RU0 A;  2SGP I;  1OYV I;  5EX0 A;  2J87 A;  1PTQ A;  2XRC A;  1XX6 A;  2V53 A;  1SGE I;  3UGI A;  2V1C C;  2BUS A;  2DIP A;  2ENZ A;  1TBQ R;  1W3S A;  2KMO A;  1LR8 A;  3D00 A;  1HJA I;  2QQC A;  2E5R A;  3E59 A;  1TUR A;  1SGP I;  2SGF I;  2L8E A;  2SGD I;  2F3C I;  3VDU A;  1U5K A;  2P6A C;  3OXL A;  2SGQ I;  1CT0 I;  2B8T A;  1OVO A;  1RFH A;  2JYY A;  1PCE A;  3PDN A;  3QTL D;  4SGB I;  1CGJ I;  1X4S A;  2GVI A;  2NU0 I;  1AN1 I;  3QWP A;  2A20 A;  5FUX A;  4HGU A;  2GKV A;  1TBO A;  1N13 A;  3OL0 A;  1Z7K B;  3SGQ I;  2JZM A;  4JCV E;  1TUS A;  4UXJ A;  1TGS I;  1PJU A;  1CHO I;  2QPO A;  5CCL A;  1PTR A;  3FC3 A;  2GKT I;  4UXI A;  1W4R A;  2W0T A;  1CSO I;  2M5X A;  2KMQ A;  2ORV A;  5HI7 A;  3TJQ A;  1SGQ I;  1VDD A;  5FUW A;  1SGN I;  1V1H A;  3CXL A;  1H0Z A;  1BUS A;  1IY6 A;  1DS2 I;  2FNF X;  5DAE A;  5FUY A;  3OVO A;  1Y1C A;  1OMU A;  1R0R I;  3OXF A;  4E1P A;  1MT1 A;  2ROW A;  1XBT A;  1FAQ A;  2ARP F;  5CCM A;  2JA1 A;  2VRW B;  2ERW A;  1OMT A;  1UVG A;  2K9H A;  1X74 A;  2ENN A;  4GI3 C;  3VE5 A;  4FKD A;  1Y8F A;  2ORW A;  2WCY A;  2N17 A;  2N52 A;  1SGY I;  1YTP A;  2ODD A;  2N1A B;  3HH2 C;  1FAR A;  2KMR A;  3SGB I;  5HQ8 A;  2DB6 A;  2LEO A;  3UEY A;  2QQE A;  3VDP A;  2L7X A;  2QQD A;  1SGD I;  1SGR I;  5JHW C;  2J9R A;  1M8C A;  1TBN A;  1UUC A;  1HPT A;  2ELI A;  3GOX A;  2GKR I;  1PPF I;  1TBR R;  4UXH A;  2NU3 I;  3UFF A;  1V1I A;  2UZ3 A;  1CE3 A;  3UGL A;  3KY9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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