2WGCA

2.2 angstroms resolution structure analysis of two refined n-acetylneuraminyllactose-wheat germ agglutinin isolectin complexes
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
171
structure length
171
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCPNNHCCSQYGHCGFGAEYCGAGCQGGPCRADIKCGSQSGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lectin (agglutinin)
molecule keywords WHEAT GERM LECTIN
publication title 2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes.
pubmed doi rcsb
source organism Triticum aestivum
total genus 41
structure length 171
sequence length 171
chains with identical sequence B
ec nomenclature
pdb deposition date 1990-04-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2wgcA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2wgcA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2wgcA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2wgcA01
1K7UA 1K7TA 2X52A 4AMLA 4MPIA 1UHAA 2UVOA 1P9GA 2LB7A 1P9ZA 1Q9BA 1WGCA 4WP4A 1ULNA 1HEVA 1ULMA 9WGAA 2DKVA 1WKXA 2WGCA 2X3TA 1K7VA 1WGTA 7WGAA 2CWGA 1ULKA
chains in the Genus database with same CATH superfamily
4UXHA 2JXDA 3GOXA 3QAHA 4E1RA 2CWFA 1DS2I 3QWPA 1CT0I 2P6AC 1PCEA 2X52A 1IY6A 1CT4I 1WTJA 2K9HA 3E2IA 1NUBA 1TGSI 5E3QA 1PTRA 4JCVE 1SGEI 4FKDA 2RIJA 1TURA 2NU1I 1M8BA 2N1AB 2E5RA 1WGCA 1CSOI 4WP4A 2N17A 2KMPA 1ULMA 2JYYA 9WGAA 5E3RA 2GKRI 1S20A 2DKVA 3TO9A 2OU2A 1YTPA 3OVOA 2WGCA 1Y1BA 1AN1I 2L7XA 2CWHA 5HI7A 1ULKA 2JW6A 1TUSA 2CJSC 3UEJA 4E1PA 1OMUA 5JHWC 1HDLA 1R0RI 2SGFI 2YQPA 3SGBI 3UGDA 1W4RA 1K7TA 4L9MA 3SEKC 1CHOI 3OXFA 1DS3I 1U5KA 1OYVI 3TOBA 5EX0A 3TOAA 4MPIA 1VDDA 1UHAA 1Z2IA 1SGRI 1SGDI 2QQEA 3UGLA 2OVOA 1NXUA 1TBRR 1CE3A 3RU0A 5J8FA 1KBFA 1XBTA 2FNFX 1CGII 1FY7A 3OXLA 1IY5A 1P9ZA 2W0TA 2KMQA 1BUSA 2NU2I 1R79A 2E73A 2L8EA 2SGDI 4A24A 1MJAA 2JA1A 2OZUA 2QPOA 2ODDA 2RC4A 3QTLD 4HGUA 2QQ0A 1XX6A 3FSYA 2OD1A 1PPFI 4OVOA 2GIVA 1CT2I 3SGQI 2GVIA 3TO7A 7WGAA 2CWGA 5CCMA 3R5CA 2DIPA 3KY9A 3VDPA 1TOTA 2F3CI 1MJBA 1X74A 4UXJA 2SGPI 1HJAI 3OL0A 3R5BA 3TO6A 2KMRA 3FC3A 2ARPF 1Y1CA 1UVGA 1KBEA 2LUYA 5E3PA 1OMTA 1PTQA 1FARA 2NU0I 5CCLA 1W3SA 3TJQA 5FUXA 1P9GA 3E59A 5FUWA 2LB7A 2XRCA 5EX3A 1LR7A 1HPTA 2M5XA 1TBNA 1MJ9A 1N13A 2V1CA 1H0ZA 5FUYA 1MT1A 2B8TA 2QQDA 1V1IA 2WCYA 1FYBA 1SGQI 1SGYI 2SGEI 1XA6A 2ORVA 3UFFA 2A20A 1WKXA 2QQCA 2B0UC 2DB6A 2N71A 2ELIA 2X3TA 3UGIA 1X4SA 3R5DA 2KCXA 2NU3I 1Z7KB 1KMAA 1TBOA 2WVJA 3B4VC 4UXIA 1TBQR 2ENNA 5J8CA 2ERWA 2N52A 1K7UA 1Y8FA 3MEKA 2ORWA 1FAQA 2Y0MA 2YUUA 1SGPI 3VE5A 1BMOA 1UUCA 4AMLA 3UOEA 2GKTI 1V1HA 3PDNA 2V53A 2UVOA 1LR8A 1OVOA 2ROWA 2UZ3A 2VRWB 1UVFA 3BJIA 3UEYA 1IW4A 5DAEA 2JZMA 2LEOA 2NU4I 1PJUA 1LR9A 1Q9BA 1YU6C 2GKVA 2PQ8A 2J9RA 3OXGA 4SGBI 1ULNA 5FUVA 3R5AA 4B6DA 5HQ8A 1HEVA 3D00A 2KMOA 2ENZA 2J87A 1TIHA 3VDUA 3FSXA 1RFHA 3HH2C 1M8CA 1CGJI 1K7VA 1WGTA 2V1CC 4GI3C 1SGNI 2SGQI 3CXLA 4DNCA 2BUSA
chains in the Genus database with same CATH topology
1K7UA 1K7TA 2X52A 4AMLA 4MPIA 1UHAA 2UVOA 1P9GA 2LB7A 1P9ZA 1Q9BA 1WGCA 4WP4A 1ULNA 1HEVA 1ULMA 9WGAA 2DKVA 1WKXA 2WGCA 2X3TA 1K7VA 1WGTA 7WGAA 2CWGA 1ULKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K7U A;  1K7T A;  2X52 A;  4AML A;  4MPI A;  1UHA A;  2UVO A;  1P9G A;  2LB7 A;  1P9Z A;  1Q9B A;  1WGC A;  4WP4 A;  1ULN A;  1HEV A;  1ULM A;  9WGA A;  2DKV A;  1WKX A;  2WGC A;  2X3T A;  1K7V A;  1WGT A;  7WGA A;  2CWG A;  1ULK A; 
#chains in the Genus database with same CATH topology
 4UXH A;  2JXD A;  3GOX A;  3QAH A;  4E1R A;  2CWF A;  1DS2 I;  3QWP A;  1CT0 I;  2P6A C;  1PCE A;  2X52 A;  1IY6 A;  1CT4 I;  1WTJ A;  2K9H A;  3E2I A;  1NUB A;  1TGS I;  5E3Q A;  1PTR A;  4JCV E;  1SGE I;  4FKD A;  2RIJ A;  1TUR A;  2NU1 I;  1M8B A;  2N1A B;  2E5R A;  1WGC A;  1CSO I;  4WP4 A;  2N17 A;  2KMP A;  1ULM A;  2JYY A;  9WGA A;  5E3R A;  2GKR I;  1S20 A;  2DKV A;  3TO9 A;  2OU2 A;  1YTP A;  3OVO A;  2WGC A;  1Y1B A;  1AN1 I;  2L7X A;  2CWH A;  5HI7 A;  1ULK A;  2JW6 A;  1TUS A;  2CJS C;  3UEJ A;  4E1P A;  1OMU A;  5JHW C;  1HDL A;  1R0R I;  2SGF I;  2YQP A;  3SGB I;  3UGD A;  1W4R A;  1K7T A;  4L9M A;  3SEK C;  1CHO I;  3OXF A;  1DS3 I;  1U5K A;  1OYV I;  3TOB A;  5EX0 A;  3TOA A;  4MPI A;  1VDD A;  1UHA A;  1Z2I A;  1SGR I;  1SGD I;  2QQE A;  3UGL A;  2OVO A;  1NXU A;  1TBR R;  1CE3 A;  3RU0 A;  5J8F A;  1KBF A;  1XBT A;  2FNF X;  1CGI I;  1FY7 A;  3OXL A;  1IY5 A;  1P9Z A;  2W0T A;  2KMQ A;  1BUS A;  2NU2 I;  1R79 A;  2E73 A;  2L8E A;  2SGD I;  4A24 A;  1MJA A;  2JA1 A;  2OZU A;  2QPO A;  2ODD A;  2RC4 A;  3QTL D;  4HGU A;  2QQ0 A;  1XX6 A;  3FSY A;  2OD1 A;  1PPF I;  4OVO A;  2GIV A;  1CT2 I;  3SGQ I;  2GVI A;  3TO7 A;  7WGA A;  2CWG A;  5CCM A;  3R5C A;  2DIP A;  3KY9 A;  3VDP A;  1TOT A;  2F3C I;  1MJB A;  1X74 A;  4UXJ A;  2SGP I;  1HJA I;  3OL0 A;  3R5B A;  3TO6 A;  2KMR A;  3FC3 A;  2ARP F;  1Y1C A;  1UVG A;  1KBE A;  2LUY A;  5E3P A;  1OMT A;  1PTQ A;  1FAR A;  2NU0 I;  5CCL A;  1W3S A;  3TJQ A;  5FUX A;  1P9G A;  3E59 A;  5FUW A;  2LB7 A;  2XRC A;  5EX3 A;  1LR7 A;  1HPT A;  2M5X A;  1TBN A;  1MJ9 A;  1N13 A;  2V1C A;  1H0Z A;  5FUY A;  1MT1 A;  2B8T A;  2QQD A;  1V1I A;  2WCY A;  1FYB A;  1SGQ I;  1SGY I;  2SGE I;  1XA6 A;  2ORV A;  3UFF A;  2A20 A;  1WKX A;  2QQC A;  2B0U C;  2DB6 A;  2N71 A;  2ELI A;  2X3T A;  3UGI A;  1X4S A;  3R5D A;  2KCX A;  2NU3 I;  1Z7K B;  1KMA A;  1TBO A;  2WVJ A;  3B4V C;  4UXI A;  1TBQ R;  2ENN A;  5J8C A;  2ERW A;  2N52 A;  1K7U A;  1Y8F A;  3MEK A;  2ORW A;  1FAQ A;  2Y0M A;  2YUU A;  1SGP I;  3VE5 A;  1BMO A;  1UUC A;  4AML A;  3UOE A;  2GKT I;  1V1H A;  3PDN A;  2V53 A;  2UVO A;  1LR8 A;  1OVO A;  2ROW A;  2UZ3 A;  2VRW B;  1UVF A;  3BJI A;  3UEY A;  1IW4 A;  5DAE A;  2JZM A;  2LEO A;  2NU4 I;  1PJU A;  1LR9 A;  1Q9B A;  1YU6 C;  2GKV A;  2PQ8 A;  2J9R A;  3OXG A;  4SGB I;  1ULN A;  5FUV A;  3R5A A;  4B6D A;  5HQ8 A;  1HEV A;  3D00 A;  2KMO A;  2ENZ A;  2J87 A;  1TIH A;  3VDU A;  3FSX A;  1RFH A;  3HH2 C;  1M8C A;  1CGJ I;  1K7V A;  1WGT A;  2V1C C;  4GI3 C;  1SGN I;  2SGQ I;  3CXL A;  4DNC A;  2BUS A; 
#chains in the Genus database with same CATH homology
 1K7U A;  1K7T A;  2X52 A;  4AML A;  4MPI A;  1UHA A;  2UVO A;  1P9G A;  2LB7 A;  1P9Z A;  1Q9B A;  1WGC A;  4WP4 A;  1ULN A;  1HEV A;  1ULM A;  9WGA A;  2DKV A;  1WKX A;  2WGC A;  2X3T A;  1K7V A;  1WGT A;  7WGA A;  2CWG A;  1ULK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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