1TBOA

Nmr structure of a protein kinase c-g phorbol-binding domain, 30 structures
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
66
structure length
66
Chain Sequence
b'QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERR'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
pubmed doi rcsb
molecule keywords PROTEIN KINASE C, GAMMA TYPE
source organism Rattus rattus
molecule tags Calcium-binding protein
total genus 8
structure length 66
sequence length 66
ec nomenclature ec 2.7.11.13: Protein kinase C.
pdb deposition date 1997-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tboA00
4UXHA 4B6DA 2WVJA 1FARA 1TBOA 3E2IA 2QPOA 5FUXA 3UGDA 2FNFX 2QQ0A 2ORVA 3UGLA 2B8TA 2E73A 1RFHA 2ORWA 3CXLA 1XBTA 1XA6A 2ELIA 2DB6A 2GVIA 2QQEA 2UZ3A 3KY9A 4UXJA 3BJIA 2YUUA 2J87A 2ENZA 5FUVA 2ENNA 1TBNA 1XX6A 2ROWA 2VRWB 1FAQA 1Y8FA 4UXIA 5FUYA 1PTRA 1KBFA 3UFFA 1R79A 4L9MA 1KBEA 2JA1A 5FUWA 3UEYA 3UEJA 3UGIA 4FKDA 2J9RA 1PTQA 1W4RA
chains in the Genus database with same CATH superfamily
1R0RI 4UXHA 1NXUA 5E3RA 1WTJA 2N1AB 2XRCA 2WVJA 2ERWA 1TBOA 2QPOA 4DNCA 1DS3I 2QQ0A 3MEKA 1S20A 1KMAA 1LR8A 1IW4A 1U5KA 2DB6A 2GVIA 3KY9A 1LR9A 1SGYI 1V1IA 1SGRI 3OL0A 5DAEA 5HI7A 2ENZA 1FY7A 1CHOI 2LUYA 2QQDA 2NU1I 4E1RA 1BMOA 2SGPI 2VRWB 1FAQA 1WGTA 1PTRA 2CJSC 2SGEI 1WGCA 1M8CA 5EX3A 3OXGA 1IY6A 2DKVA 1KBFA 1TIHA 1MJ9A 1SGPI 3R5AA 2GKTI 2PQ8A 3FSYA 1TUSA 1OMTA 2NU4I 4FKDA 2L7XA 1PTQA 2WGCA 2M5XA 1W4RA 1V1HA 2NU0I 2WCYA 4JCVE 2JXDA 1MT1A 2JYYA 4GI3C 1UUCA 2ODDA 5E3PA 5FUXA 1PCEA 3RU0A 3R5DA 2ORVA 4SGBI 3VDUA 5EX0A 3FSXA 1Z2IA 2E73A 7WGAA 2ORWA 1Q9BA 1NUBA 1XA6A 2QQEA 1ULNA 5JHWC 3E59A 2W0TA 5J8FA 3BJIA 3QWPA 2J87A 1SGDI 2RIJA 3D00A 1SGEI 3OXLA 1TBQR 3PDNA 1XX6A 1CT2I 1X74A 2A20A 3GOXA 2KMRA 1WKXA 2CWHA 1Y1BA 3OVOA 1R79A 1HJAI 2OD1A 3UGDA 1CT0I 2V1CA 1LR7A 3UEYA 3UEJA 3SGQI 5CCMA 1MJBA 1UVGA 1K7TA 2KMQA 1DS2I 2N71A 3UFFA 2X52A 2CWFA 3UOEA 3TOAA 1TOTA 3FC3A 1MJAA 2K9HA 2YQPA 4MPIA 4B6DA 2GKRI 1CE3A 2FNFX 2B8TA 1CGII 3HH2C 3QAHA 3SEKC 4OVOA 1OMUA 1RFHA 2KMPA 3TO6A 2QQCA 1SGNI 5J8CA 4E1PA 1M8BA 4UXJA 4HGUA 2ARPF 1OVOA 3TOBA 1OYVI 1Y1CA 2L8EA 1CT4I 1HPTA 1N13A 5CCLA 2ROWA 4A24A 2N52A 1FYBA 2LEOA 1X4SA 2NU2I 2N17A 2SGFI 1PPFI 3OXFA 3QTLD 1KBEA 5FUWA 3TJQA 2KMOA 1HDLA 9WGAA 3UGIA 1IY5A 2V1CC 1PJUA 2JW6A 2OU2A 1VDDA 2E5RA 2GIVA 1YU6C 2DIPA 2BUSA 2Y0MA 1K7VA 3B4VC 2CWGA 1HEVA 1CSOI 2P6AC 3R5CA 1FARA 1Z7KB 3E2IA 1BUSA 1YTPA 2SGDI 3UGLA 1CGJI 1TBRR 2F3CI 1XBTA 3CXLA 4AMLA 3SGBI 2ELIA 1TGSI 1ULMA 1SGQI 2OVOA 2UZ3A 2X3TA 2SGQI 2YUUA 2NU3I 3VDPA 5FUVA 5HQ8A 3TO9A 1ULKA 1P9ZA 1TBNA 2ENNA 2JZMA 4WP4A 1W3SA 1Y8FA 1P9GA 2OZUA 4UXIA 5FUYA 2V53A 3VE5A 1TURA 1UVFA 2B0UC 4L9MA 3R5BA 2JA1A 1AN1I 2GKVA 2LB7A 3TO7A 2RC4A 5E3QA 2KCXA 2J9RA 1K7UA 2UVOA 1H0ZA 1UHAA
chains in the Genus database with same CATH topology
1R0RI 4UXHA 2XRCA 2N1AB 2WVJA 2ERWA 1TBOA 2QPOA 1DS3I 2QQ0A 3MEKA 1KMAA 1LR8A 1IW4A 1U5KA 2DB6A 2GVIA 3KY9A 1LR9A 1SGYI 1V1IA 1SGRI 3OL0A 5DAEA 5HI7A 2ENZA 1CHOI 2LUYA 2QQDA 2NU1I 4E1RA 1BMOA 2SGPI 2VRWB 1FAQA 1PTRA 2CJSC 2SGEI 5EX3A 1M8CA 1IY6A 3OXGA 1KBFA 1TIHA 1SGPI 2GKTI 1TUSA 1OMTA 2NU4I 4FKDA 2L7XA 1PTQA 2M5XA 1W4RA 1V1HA 2NU0I 2WCYA 4JCVE 2JXDA 1MT1A 2JYYA 4GI3C 1UUCA 2ODDA 5FUXA 3UGDA 1PCEA 3VDUA 2ORVA 4SGBI 5EX0A 2E73A 2ORWA 1NUBA 1XA6A 2QQEA 5JHWC 3E59A 2W0TA 3BJIA 3QWPA 2J87A 1SGDI 3D00A 1SGEI 3OXLA 1TBQR 3PDNA 1XX6A 1CT2I 1X74A 2A20A 3GOXA 2KMRA 1Y1BA 3OVOA 1R79A 1HJAI 2OD1A 1CT0I 2V1CA 1LR7A 3UEYA 3UEJA 3SGQI 5CCMA 1UVGA 2KMQA 1DS2I 2N71A 3UFFA 1TOTA 3FC3A 2YQPA 2K9HA 4B6DA 2GKRI 1CE3A 2FNFX 2B8TA 1CGII 3HH2C 3SEKC 4OVOA 1OMUA 1RFHA 2KMPA 2QQCA 1SGNI 4E1PA 1M8BA 4UXJA 4HGUA 2ARPF 1OVOA 1OYVI 1Y1CA 2L8EA 1CT4I 1HPTA 1N13A 5CCLA 2ROWA 4A24A 2N52A 1FYBA 2LEOA 1X4SA 2NU2I 2N17A 2SGFI 1PPFI 3OXFA 3QTLD 1KBEA 5FUWA 3TJQA 2KMOA 1HDLA 3UGIA 1IY5A 2V1CC 1PJUA 2JW6A 1VDDA 2E5RA 3B4VC 1YU6C 2DIPA 2BUSA 1CSOI 2P6AC 1BUSA 1FARA 1Z7KB 3E2IA 1YTPA 2SGDI 3UGLA 1CGJI 1TBRR 2F3CI 1XBTA 3CXLA 3SGBI 2ELIA 1TGSI 2OVOA 1SGQI 2UZ3A 2SGQI 2YUUA 2NU3I 3VDPA 5FUVA 5HQ8A 2ENNA 1TBNA 2JZMA 1W3SA 1Y8FA 4UXIA 5FUYA 2V53A 3VE5A 1TURA 1UVFA 2B0UC 4L9MA 2JA1A 1AN1I 2GKVA 2KCXA 2J9RA 3RU0A 1H0ZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4UXH A;  4B6D A;  2WVJ A;  1FAR A;  1TBO A;  3E2I A;  2QPO A;  5FUX A;  3UGD A;  2FNF X;  2QQ0 A;  2ORV A;  3UGL A;  2B8T A;  2E73 A;  1RFH A;  2ORW A;  3CXL A;  1XBT A;  1XA6 A;  2ELI A;  2DB6 A;  2GVI A;  2QQE A;  2UZ3 A;  3KY9 A;  4UXJ A;  3BJI A;  2YUU A;  2J87 A;  2ENZ A;  5FUV A;  2ENN A;  1TBN A;  1XX6 A;  2ROW A;  2VRW B;  1FAQ A;  1Y8F A;  4UXI A;  5FUY A;  1PTR A;  1KBF A;  3UFF A;  1R79 A;  4L9M A;  1KBE A;  2JA1 A;  5FUW A;  3UEY A;  3UEJ A;  3UGI A;  4FKD A;  2J9R A;  1PTQ A;  1W4R A; 
#chains in the Genus database with same CATH topology
 1R0R I;  4UXH A;  1NXU A;  5E3R A;  1WTJ A;  2N1A B;  2XRC A;  2WVJ A;  2ERW A;  1TBO A;  2QPO A;  4DNC A;  1DS3 I;  2QQ0 A;  3MEK A;  1S20 A;  1KMA A;  1LR8 A;  1IW4 A;  1U5K A;  2DB6 A;  2GVI A;  3KY9 A;  1LR9 A;  1SGY I;  1V1I A;  1SGR I;  3OL0 A;  5DAE A;  5HI7 A;  2ENZ A;  1FY7 A;  1CHO I;  2LUY A;  2QQD A;  2NU1 I;  4E1R A;  1BMO A;  2SGP I;  2VRW B;  1FAQ A;  1WGT A;  1PTR A;  2CJS C;  2SGE I;  1WGC A;  1M8C A;  5EX3 A;  3OXG A;  1IY6 A;  2DKV A;  1KBF A;  1TIH A;  1MJ9 A;  1SGP I;  3R5A A;  2GKT I;  2PQ8 A;  3FSY A;  1TUS A;  1OMT A;  2NU4 I;  4FKD A;  2L7X A;  1PTQ A;  2WGC A;  2M5X A;  1W4R A;  1V1H A;  2NU0 I;  2WCY A;  4JCV E;  2JXD A;  1MT1 A;  2JYY A;  4GI3 C;  1UUC A;  2ODD A;  5E3P A;  5FUX A;  1PCE A;  3RU0 A;  3R5D A;  2ORV A;  4SGB I;  3VDU A;  5EX0 A;  3FSX A;  1Z2I A;  2E73 A;  7WGA A;  2ORW A;  1Q9B A;  1NUB A;  1XA6 A;  2QQE A;  1ULN A;  5JHW C;  3E59 A;  2W0T A;  5J8F A;  3BJI A;  3QWP A;  2J87 A;  1SGD I;  2RIJ A;  3D00 A;  1SGE I;  3OXL A;  1TBQ R;  3PDN A;  1XX6 A;  1CT2 I;  1X74 A;  2A20 A;  3GOX A;  2KMR A;  1WKX A;  2CWH A;  1Y1B A;  3OVO A;  1R79 A;  1HJA I;  2OD1 A;  3UGD A;  1CT0 I;  2V1C A;  1LR7 A;  3UEY A;  3UEJ A;  3SGQ I;  5CCM A;  1MJB A;  1UVG A;  1K7T A;  2KMQ A;  1DS2 I;  2N71 A;  3UFF A;  2X52 A;  2CWF A;  3UOE A;  3TOA A;  1TOT A;  3FC3 A;  1MJA A;  2K9H A;  2YQP A;  4MPI A;  4B6D A;  2GKR I;  1CE3 A;  2FNF X;  2B8T A;  1CGI I;  3HH2 C;  3QAH A;  3SEK C;  4OVO A;  1OMU A;  1RFH A;  2KMP A;  3TO6 A;  2QQC A;  1SGN I;  5J8C A;  4E1P A;  1M8B A;  4UXJ A;  4HGU A;  2ARP F;  1OVO A;  3TOB A;  1OYV I;  1Y1C A;  2L8E A;  1CT4 I;  1HPT A;  1N13 A;  5CCL A;  2ROW A;  4A24 A;  2N52 A;  1FYB A;  2LEO A;  1X4S A;  2NU2 I;  2N17 A;  2SGF I;  1PPF I;  3OXF A;  3QTL D;  1KBE A;  5FUW A;  3TJQ A;  2KMO A;  1HDL A;  9WGA A;  3UGI A;  1IY5 A;  2V1C C;  1PJU A;  2JW6 A;  2OU2 A;  1VDD A;  2E5R A;  2GIV A;  1YU6 C;  2DIP A;  2BUS A;  2Y0M A;  1K7V A;  3B4V C;  2CWG A;  1HEV A;  1CSO I;  2P6A C;  3R5C A;  1FAR A;  1Z7K B;  3E2I A;  1BUS A;  1YTP A;  2SGD I;  3UGL A;  1CGJ I;  1TBR R;  2F3C I;  1XBT A;  3CXL A;  4AML A;  3SGB I;  2ELI A;  1TGS I;  1ULM A;  1SGQ I;  2OVO A;  2UZ3 A;  2X3T A;  2SGQ I;  2YUU A;  2NU3 I;  3VDP A;  5FUV A;  5HQ8 A;  3TO9 A;  1ULK A;  1P9Z A;  1TBN A;  2ENN A;  2JZM A;  4WP4 A;  1W3S A;  1Y8F A;  1P9G A;  2OZU A;  4UXI A;  5FUY A;  2V53 A;  3VE5 A;  1TUR A;  1UVF A;  2B0U C;  4L9M A;  3R5B A;  2JA1 A;  1AN1 I;  2GKV A;  2LB7 A;  3TO7 A;  2RC4 A;  5E3Q A;  2KCX A;  2J9R A;  1K7U A;  2UVO A;  1H0Z A;  1UHA A; 
#chains in the Genus database with same CATH homology
 1R0R I;  4UXH A;  2XRC A;  2N1A B;  2WVJ A;  2ERW A;  1TBO A;  2QPO A;  1DS3 I;  2QQ0 A;  3MEK A;  1KMA A;  1LR8 A;  1IW4 A;  1U5K A;  2DB6 A;  2GVI A;  3KY9 A;  1LR9 A;  1SGY I;  1V1I A;  1SGR I;  3OL0 A;  5DAE A;  5HI7 A;  2ENZ A;  1CHO I;  2LUY A;  2QQD A;  2NU1 I;  4E1R A;  1BMO A;  2SGP I;  2VRW B;  1FAQ A;  1PTR A;  2CJS C;  2SGE I;  5EX3 A;  1M8C A;  1IY6 A;  3OXG A;  1KBF A;  1TIH A;  1SGP I;  2GKT I;  1TUS A;  1OMT A;  2NU4 I;  4FKD A;  2L7X A;  1PTQ A;  2M5X A;  1W4R A;  1V1H A;  2NU0 I;  2WCY A;  4JCV E;  2JXD A;  1MT1 A;  2JYY A;  4GI3 C;  1UUC A;  2ODD A;  5FUX A;  3UGD A;  1PCE A;  3VDU A;  2ORV A;  4SGB I;  5EX0 A;  2E73 A;  2ORW A;  1NUB A;  1XA6 A;  2QQE A;  5JHW C;  3E59 A;  2W0T A;  3BJI A;  3QWP A;  2J87 A;  1SGD I;  3D00 A;  1SGE I;  3OXL A;  1TBQ R;  3PDN A;  1XX6 A;  1CT2 I;  1X74 A;  2A20 A;  3GOX A;  2KMR A;  1Y1B A;  3OVO A;  1R79 A;  1HJA I;  2OD1 A;  1CT0 I;  2V1C A;  1LR7 A;  3UEY A;  3UEJ A;  3SGQ I;  5CCM A;  1UVG A;  2KMQ A;  1DS2 I;  2N71 A;  3UFF A;  1TOT A;  3FC3 A;  2YQP A;  2K9H A;  4B6D A;  2GKR I;  1CE3 A;  2FNF X;  2B8T A;  1CGI I;  3HH2 C;  3SEK C;  4OVO A;  1OMU A;  1RFH A;  2KMP A;  2QQC A;  1SGN I;  4E1P A;  1M8B A;  4UXJ A;  4HGU A;  2ARP F;  1OVO A;  1OYV I;  1Y1C A;  2L8E A;  1CT4 I;  1HPT A;  1N13 A;  5CCL A;  2ROW A;  4A24 A;  2N52 A;  1FYB A;  2LEO A;  1X4S A;  2NU2 I;  2N17 A;  2SGF I;  1PPF I;  3OXF A;  3QTL D;  1KBE A;  5FUW A;  3TJQ A;  2KMO A;  1HDL A;  3UGI A;  1IY5 A;  2V1C C;  1PJU A;  2JW6 A;  1VDD A;  2E5R A;  3B4V C;  1YU6 C;  2DIP A;  2BUS A;  1CSO I;  2P6A C;  1BUS A;  1FAR A;  1Z7K B;  3E2I A;  1YTP A;  2SGD I;  3UGL A;  1CGJ I;  1TBR R;  2F3C I;  1XBT A;  3CXL A;  3SGB I;  2ELI A;  1TGS I;  2OVO A;  1SGQ I;  2UZ3 A;  2SGQ I;  2YUU A;  2NU3 I;  3VDP A;  5FUV A;  5HQ8 A;  2ENN A;  1TBN A;  2JZM A;  1W3S A;  1Y8F A;  4UXI A;  5FUY A;  2V53 A;  3VE5 A;  1TUR A;  1UVF A;  2B0U C;  4L9M A;  2JA1 A;  1AN1 I;  2GKV A;  2KCX A;  2J9R A;  3RU0 A;  1H0Z A; 
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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