1TBOA

Nmr structure of a protein kinase c-g phorbol-binding domain, 30 structures
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
66
structure length
66
Chain Sequence
QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Calcium-binding protein
source organism Rattus rattus
publication title NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
pubmed doi rcsb
molecule keywords PROTEIN KINASE C, GAMMA TYPE
total genus 8
structure length 66
sequence length 66
ec nomenclature ec 2.7.11.13: Protein kinase C.
pdb deposition date 1997-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tboA00
2E73A 1KBEA 4UXHA 1TBOA 3UEJA 4B6DA 2QQEA 2VRWB 1PTRA 4L9MA 4UXIA 1XA6A 3BJIA 2ORVA 2J87A 1R79A 1XX6A 1TBNA 3E2IA 1KBFA 2DB6A 2UZ3A 2ENNA 1Y8FA 1FARA 2ENZA 2J9RA 1FAQA 5FUXA 2ROWA 3KY9A 5FUVA 1PTQA 2ELIA 2QQ0A 2B8TA 3UGDA 2JA1A 4FKDA 1XBTA 1RFHA 3UGIA 2QPOA 4UXJA 5FUWA 2ORWA 3CXLA 5FUYA 2WVJA 2YUUA 3UFFA 3UEYA 1W4RA 2FNFX 2GVIA 3UGLA
chains in the Genus database with same CATH superfamily
1WGTA 1N13A 1CT4I 3OXGA 2ERWA 2RC4A 1MT1A 1CHOI 1SGQI 1FY7A 1WKXA 2CWFA 2PQ8A 2XRCA 3FC3A 1NUBA 2GKRI 2QQDA 4JCVE 3TJQA 3VE5A 1P9ZA 1X4SA 3R5BA 1KBFA 2DB6A 2KMOA 1MJAA 2SGPI 1Y1CA 1UVGA 5FUXA 3R5AA 2LB7A 4DNCA 2K9HA 2CWGA 1PTQA 1HDLA 2ELIA 1P9GA 2B8TA 2CJSC 3UGDA 2JA1A 2L8EA 4HGUA 3OXFA 1MJ9A 1RFHA 2CWHA 2JXDA 1Z7KB 2N71A 2OU2A 2QPOA 3E59A 3OXLA 2X3TA 3UOEA 2W0TA 2YUUA 3R5DA 3UGIA 1W4RA 1YU6C 2FNFX 2GVIA 4OVOA 1CT0I 1U5KA 5E3QA 2E73A 1KBEA 3TO9A 2UVOA 4UXHA 1HEVA 1X74A 1CT2I 1M8CA 1DS2I 1WGCA 3FSYA 4GI3C 1CGII 2DIPA 3FSXA 2GKTI 2J87A 1VDDA 4E1RA 2P6AC 1HJAI 1R79A 1R0RI 1TUSA 1UHAA 5HI7A 2SGEI 1TGSI 2UZ3A 3RU0A 1IY5A 2KCXA 2NU4I 2ENZA 2ROWA 3KY9A 5FUVA 1TURA 2QQ0A 2N52A 1AN1I 1V1HA 1CGJI 1XBTA 1LR7A 3SGQI 5J8CA 1KMAA 5HQ8A 3TO6A 5CCLA 2E5RA 1K7TA 1OVOA 1Z2IA 2BUSA 2GIVA 2V1CA 1FYBA 2X52A 4MPIA 1LR8A 1V1IA 1K7VA 2NU2I 3UEJA 1TBOA 2JZMA 5DAEA 1TBQR 4B6DA 2A20A 3GOXA 1PTRA 2JW6A 2LEOA 4L9MA 1MJBA 2Y0MA 1K7UA 1PCEA 2OZUA 3BJIA 3OVOA 4UXIA 2V1CC 2YQPA 2JYYA 2LUYA 5CCMA 1IY6A 1S20A 2M5XA 1ULMA 4E1PA 3VDUA 1BMOA 1W3SA 3VDPA 3PDNA 3MEKA 1YTPA 2ENNA 1NXUA 2J9RA 2ODDA 5E3PA 3QTLD 7WGAA 1FAQA 1ULNA 3QAHA 2GKVA 2WGCA 1OYVI 4FKDA 1TIHA 3TO7A 4WP4A 4UXJA 5FUWA 2DKVA 1M8BA 1TOTA 2ORWA 1SGPI 2KMRA 2NU0I 3CXLA 2N17A 2QQCA 5EX0A 5FUYA 3UFFA 1Q9BA 1WTJA 1SGYI 2SGDI 1HPTA 1Y1BA 2NU1I 3OL0A 3SEKC 1SGDI 1ULKA 2V53A 4SGBI 5E3RA 2QQEA 2VRWB 3R5CA 4AMLA 1IW4A 2N1AB 4A24A 1XA6A 2ORVA 3QWPA 3TOAA 1OMUA 1BUSA 1PPFI 3SGBI 1OMTA 1UUCA 2KMPA 1SGNI 1XX6A 2OD1A 1TBNA 3D00A 2SGFI 3E2IA 5EX3A 9WGAA 2F3CI 5JHWC 1Y8FA 1FARA 5J8FA 2RIJA 3B4VC 1LR9A 2OVOA 3HH2C 3TOBA 1TBRR 2NU3I 2ARPF 1DS3I 1CE3A 2WCYA 1UVFA 1PJUA 2KMQA 1H0ZA 1SGEI 2B0UC 2L7XA 2SGQI 1CSOI 2WVJA 3UEYA 1SGRI 3UGLA
chains in the Genus database with same CATH topology
1N13A 1CT4I 3OXGA 2ERWA 1MT1A 1CHOI 1SGQI 2XRCA 3FC3A 1NUBA 2GKRI 2QQDA 4JCVE 3TJQA 3VE5A 1X4SA 1KBFA 2DB6A 2KMOA 2SGPI 1Y1CA 1UVGA 5FUXA 2K9HA 1PTQA 2ELIA 2B8TA 2CJSC 3UGDA 2JA1A 2L8EA 4HGUA 3OXFA 1RFHA 2JXDA 3OXLA 2N71A 1Z7KB 2QPOA 3E59A 2W0TA 2YUUA 3UGIA 1W4RA 1YU6C 2FNFX 2GVIA 4OVOA 1CT0I 1U5KA 2E73A 1KBEA 4UXHA 1X74A 1CT2I 1M8CA 1DS2I 4GI3C 1CGII 2DIPA 2GKTI 2J87A 1VDDA 4E1RA 2P6AC 1HJAI 1R79A 1R0RI 1TUSA 5HI7A 2SGEI 1TGSI 2UZ3A 3RU0A 1IY5A 2KCXA 2NU4I 2ENZA 2ROWA 3KY9A 5FUVA 1TURA 2QQ0A 2N52A 1AN1I 1V1HA 1CGJI 1XBTA 1LR7A 3SGQI 1KMAA 5HQ8A 5CCLA 2E5RA 1OVOA 2BUSA 1FYBA 2V1CA 1LR8A 1V1IA 2NU2I 3UEJA 1TBOA 2JZMA 5DAEA 1TBQR 4B6DA 2A20A 3GOXA 1PTRA 2JW6A 2LEOA 4L9MA 4UXIA 3OVOA 1PCEA 3BJIA 2V1CC 2YQPA 2JYYA 2LUYA 5CCMA 1IY6A 2M5XA 4E1PA 3VDUA 1BMOA 1W3SA 3VDPA 3PDNA 3MEKA 1YTPA 2ENNA 2J9RA 2ODDA 3QTLD 1FAQA 2GKVA 1OYVI 4FKDA 1TIHA 4UXJA 5FUWA 1M8BA 1TOTA 2ORWA 1SGPI 2KMRA 2NU0I 3CXLA 2N17A 2QQCA 5EX0A 5FUYA 3UFFA 1SGYI 2SGDI 1HPTA 1Y1BA 2NU1I 3OL0A 3SEKC 1SGDI 2V53A 4SGBI 2QQEA 2VRWB 1IW4A 2N1AB 4A24A 1XA6A 2ORVA 3QWPA 1OMUA 1BUSA 1PPFI 3SGBI 1OMTA 1UUCA 2KMPA 1SGNI 1XX6A 2OD1A 1TBNA 3D00A 2SGFI 3E2IA 5EX3A 1HDLA 2F3CI 5JHWC 1Y8FA 1FARA 3B4VC 1LR9A 2OVOA 3HH2C 1TBRR 2NU3I 2ARPF 1DS3I 1CE3A 2WCYA 1UVFA 1PJUA 2KMQA 1H0ZA 1SGEI 2B0UC 2L7XA 2SGQI 1CSOI 2WVJA 3UEYA 1SGRI 3UGLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2E73 A;  1KBE A;  4UXH A;  1TBO A;  3UEJ A;  4B6D A;  2QQE A;  2VRW B;  1PTR A;  4L9M A;  4UXI A;  1XA6 A;  3BJI A;  2ORV A;  2J87 A;  1R79 A;  1XX6 A;  1TBN A;  3E2I A;  1KBF A;  2DB6 A;  2UZ3 A;  2ENN A;  1Y8F A;  1FAR A;  2ENZ A;  2J9R A;  1FAQ A;  5FUX A;  2ROW A;  3KY9 A;  5FUV A;  1PTQ A;  2ELI A;  2QQ0 A;  2B8T A;  3UGD A;  2JA1 A;  4FKD A;  1XBT A;  1RFH A;  3UGI A;  2QPO A;  4UXJ A;  5FUW A;  2ORW A;  3CXL A;  5FUY A;  2WVJ A;  2YUU A;  3UFF A;  3UEY A;  1W4R A;  2FNF X;  2GVI A;  3UGL A; 
#chains in the Genus database with same CATH topology
 1WGT A;  1N13 A;  1CT4 I;  3OXG A;  2ERW A;  2RC4 A;  1MT1 A;  1CHO I;  1SGQ I;  1FY7 A;  1WKX A;  2CWF A;  2PQ8 A;  2XRC A;  3FC3 A;  1NUB A;  2GKR I;  2QQD A;  4JCV E;  3TJQ A;  3VE5 A;  1P9Z A;  1X4S A;  3R5B A;  1KBF A;  2DB6 A;  2KMO A;  1MJA A;  2SGP I;  1Y1C A;  1UVG A;  5FUX A;  3R5A A;  2LB7 A;  4DNC A;  2K9H A;  2CWG A;  1PTQ A;  1HDL A;  2ELI A;  1P9G A;  2B8T A;  2CJS C;  3UGD A;  2JA1 A;  2L8E A;  4HGU A;  3OXF A;  1MJ9 A;  1RFH A;  2CWH A;  2JXD A;  1Z7K B;  2N71 A;  2OU2 A;  2QPO A;  3E59 A;  3OXL A;  2X3T A;  3UOE A;  2W0T A;  2YUU A;  3R5D A;  3UGI A;  1W4R A;  1YU6 C;  2FNF X;  2GVI A;  4OVO A;  1CT0 I;  1U5K A;  5E3Q A;  2E73 A;  1KBE A;  3TO9 A;  2UVO A;  4UXH A;  1HEV A;  1X74 A;  1CT2 I;  1M8C A;  1DS2 I;  1WGC A;  3FSY A;  4GI3 C;  1CGI I;  2DIP A;  3FSX A;  2GKT I;  2J87 A;  1VDD A;  4E1R A;  2P6A C;  1HJA I;  1R79 A;  1R0R I;  1TUS A;  1UHA A;  5HI7 A;  2SGE I;  1TGS I;  2UZ3 A;  3RU0 A;  1IY5 A;  2KCX A;  2NU4 I;  2ENZ A;  2ROW A;  3KY9 A;  5FUV A;  1TUR A;  2QQ0 A;  2N52 A;  1AN1 I;  1V1H A;  1CGJ I;  1XBT A;  1LR7 A;  3SGQ I;  5J8C A;  1KMA A;  5HQ8 A;  3TO6 A;  5CCL A;  2E5R A;  1K7T A;  1OVO A;  1Z2I A;  2BUS A;  2GIV A;  2V1C A;  1FYB A;  2X52 A;  4MPI A;  1LR8 A;  1V1I A;  1K7V A;  2NU2 I;  3UEJ A;  1TBO A;  2JZM A;  5DAE A;  1TBQ R;  4B6D A;  2A20 A;  3GOX A;  1PTR A;  2JW6 A;  2LEO A;  4L9M A;  1MJB A;  2Y0M A;  1K7U A;  1PCE A;  2OZU A;  3BJI A;  3OVO A;  4UXI A;  2V1C C;  2YQP A;  2JYY A;  2LUY A;  5CCM A;  1IY6 A;  1S20 A;  2M5X A;  1ULM A;  4E1P A;  3VDU A;  1BMO A;  1W3S A;  3VDP A;  3PDN A;  3MEK A;  1YTP A;  2ENN A;  1NXU A;  2J9R A;  2ODD A;  5E3P A;  3QTL D;  7WGA A;  1FAQ A;  1ULN A;  3QAH A;  2GKV A;  2WGC A;  1OYV I;  4FKD A;  1TIH A;  3TO7 A;  4WP4 A;  4UXJ A;  5FUW A;  2DKV A;  1M8B A;  1TOT A;  2ORW A;  1SGP I;  2KMR A;  2NU0 I;  3CXL A;  2N17 A;  2QQC A;  5EX0 A;  5FUY A;  3UFF A;  1Q9B A;  1WTJ A;  1SGY I;  2SGD I;  1HPT A;  1Y1B A;  2NU1 I;  3OL0 A;  3SEK C;  1SGD I;  1ULK A;  2V53 A;  4SGB I;  5E3R A;  2QQE A;  2VRW B;  3R5C A;  4AML A;  1IW4 A;  2N1A B;  4A24 A;  1XA6 A;  2ORV A;  3QWP A;  3TOA A;  1OMU A;  1BUS A;  1PPF I;  3SGB I;  1OMT A;  1UUC A;  2KMP A;  1SGN I;  1XX6 A;  2OD1 A;  1TBN A;  3D00 A;  2SGF I;  3E2I A;  5EX3 A;  9WGA A;  2F3C I;  5JHW C;  1Y8F A;  1FAR A;  5J8F A;  2RIJ A;  3B4V C;  1LR9 A;  2OVO A;  3HH2 C;  3TOB A;  1TBR R;  2NU3 I;  2ARP F;  1DS3 I;  1CE3 A;  2WCY A;  1UVF A;  1PJU A;  2KMQ A;  1H0Z A;  1SGE I;  2B0U C;  2L7X A;  2SGQ I;  1CSO I;  2WVJ A;  3UEY A;  1SGR I;  3UGL A; 
#chains in the Genus database with same CATH homology
 1N13 A;  1CT4 I;  3OXG A;  2ERW A;  1MT1 A;  1CHO I;  1SGQ I;  2XRC A;  3FC3 A;  1NUB A;  2GKR I;  2QQD A;  4JCV E;  3TJQ A;  3VE5 A;  1X4S A;  1KBF A;  2DB6 A;  2KMO A;  2SGP I;  1Y1C A;  1UVG A;  5FUX A;  2K9H A;  1PTQ A;  2ELI A;  2B8T A;  2CJS C;  3UGD A;  2JA1 A;  2L8E A;  4HGU A;  3OXF A;  1RFH A;  2JXD A;  3OXL A;  2N71 A;  1Z7K B;  2QPO A;  3E59 A;  2W0T A;  2YUU A;  3UGI A;  1W4R A;  1YU6 C;  2FNF X;  2GVI A;  4OVO A;  1CT0 I;  1U5K A;  2E73 A;  1KBE A;  4UXH A;  1X74 A;  1CT2 I;  1M8C A;  1DS2 I;  4GI3 C;  1CGI I;  2DIP A;  2GKT I;  2J87 A;  1VDD A;  4E1R A;  2P6A C;  1HJA I;  1R79 A;  1R0R I;  1TUS A;  5HI7 A;  2SGE I;  1TGS I;  2UZ3 A;  3RU0 A;  1IY5 A;  2KCX A;  2NU4 I;  2ENZ A;  2ROW A;  3KY9 A;  5FUV A;  1TUR A;  2QQ0 A;  2N52 A;  1AN1 I;  1V1H A;  1CGJ I;  1XBT A;  1LR7 A;  3SGQ I;  1KMA A;  5HQ8 A;  5CCL A;  2E5R A;  1OVO A;  2BUS A;  1FYB A;  2V1C A;  1LR8 A;  1V1I A;  2NU2 I;  3UEJ A;  1TBO A;  2JZM A;  5DAE A;  1TBQ R;  4B6D A;  2A20 A;  3GOX A;  1PTR A;  2JW6 A;  2LEO A;  4L9M A;  4UXI A;  3OVO A;  1PCE A;  3BJI A;  2V1C C;  2YQP A;  2JYY A;  2LUY A;  5CCM A;  1IY6 A;  2M5X A;  4E1P A;  3VDU A;  1BMO A;  1W3S A;  3VDP A;  3PDN A;  3MEK A;  1YTP A;  2ENN A;  2J9R A;  2ODD A;  3QTL D;  1FAQ A;  2GKV A;  1OYV I;  4FKD A;  1TIH A;  4UXJ A;  5FUW A;  1M8B A;  1TOT A;  2ORW A;  1SGP I;  2KMR A;  2NU0 I;  3CXL A;  2N17 A;  2QQC A;  5EX0 A;  5FUY A;  3UFF A;  1SGY I;  2SGD I;  1HPT A;  1Y1B A;  2NU1 I;  3OL0 A;  3SEK C;  1SGD I;  2V53 A;  4SGB I;  2QQE A;  2VRW B;  1IW4 A;  2N1A B;  4A24 A;  1XA6 A;  2ORV A;  3QWP A;  1OMU A;  1BUS A;  1PPF I;  3SGB I;  1OMT A;  1UUC A;  2KMP A;  1SGN I;  1XX6 A;  2OD1 A;  1TBN A;  3D00 A;  2SGF I;  3E2I A;  5EX3 A;  1HDL A;  2F3C I;  5JHW C;  1Y8F A;  1FAR A;  3B4V C;  1LR9 A;  2OVO A;  3HH2 C;  1TBR R;  2NU3 I;  2ARP F;  1DS3 I;  1CE3 A;  2WCY A;  1UVF A;  1PJU A;  2KMQ A;  1H0Z A;  1SGE I;  2B0U C;  2L7X A;  2SGQ I;  1CSO I;  2WVJ A;  3UEY A;  1SGR I;  3UGL A; 
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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