1TBOA

Nmr structure of a protein kinase c-g phorbol-binding domain, 30 structures
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
66
structure length
66
Chain Sequence
QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Calcium-binding protein
molecule keywords PROTEIN KINASE C, GAMMA TYPE
publication title NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
pubmed doi rcsb
source organism Rattus rattus
total genus 8
structure length 66
sequence length 66
ec nomenclature ec 2.7.11.13: Protein kinase C.
pdb deposition date 1997-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tboA00
5FUYA 3UGIA 4B6DA 3KY9A 1FAQA 1RFHA 4FKDA 3UGDA 1W4RA 3BJIA 3UEYA 2QQ0A 2WVJA 1FARA 2B8TA 5FUVA 2E73A 1TBNA 2J9RA 2GVIA 1TBOA 2ORWA 4L9MA 3UGLA 2VRWB 3E2IA 1XX6A 3UEJA 1XBTA 2UZ3A 2FNFX 2J87A 2JA1A 1R79A 5FUXA 2QQEA 5FUWA 4UXIA 2ELIA 2ENNA 4UXJA 1PTQA 1XA6A 2ENZA 2ROWA 2QPOA 1KBFA 3UFFA 2ORVA 2DB6A 4UXHA 1PTRA 3CXLA 2YUUA 1Y8FA 1KBEA
chains in the Genus database with same CATH superfamily
4B6DA 3KY9A 4HGUA 2X52A 4FKDA 2NU1I 1Y1CA 2P6AC 3BJIA 3R5CA 1NUBA 1MJAA 1NXUA 2WGCA 1VDDA 1K7VA 5FUVA 1TBNA 2PQ8A 1WGCA 9WGAA 5JHWC 1SGPI 2YQPA 2ORWA 1YU6C 3E2IA 2RC4A 1V1HA 3QTLD 2OU2A 2Y0MA 5EX3A 1MJ9A 3UEJA 1TIHA 2J87A 1YTPA 1M8CA 3TOAA 3R5DA 5FUXA 2V1CC 1WGTA 3VE5A 2ELIA 1PCEA 5J8FA 4GI3C 1WKXA 1M8BA 3TO7A 1MT1A 2CJSC 2NU2I 2WCYA 5E3PA 2OD1A 2ROWA 1H0ZA 3UFFA 2L7XA 1KMAA 4UXHA 2OZUA 1S20A 3CXLA 2YUUA 3D00A 3SEKC 1CGII 1Y8FA 3FSYA 1FAQA 3OXLA 2SGQI 1IY5A 2LB7A 1LR8A 1HEVA 2GIVA 2JYYA 2BUSA 2B8TA 3OL0A 1PJUA 1SGRI 2N1AB 1LR9A 2CWGA 2QQCA 3HH2C 4MPIA 1X74A 2CWHA 2J9RA 2KMQA 2OVOA 5HI7A 3VDUA 2N71A 2GKRI 2KMOA 2F3CI 2L8EA 1OMUA 1ULKA 2DIPA 2K9HA 1N13A 2LUYA 1XBTA 2UZ3A 1X4SA 3TJQA 1R79A 1TBQR 2A20A 2QQEA 1HJAI 1CT0I 2M5XA 1MJBA 1PTQA 1OMTA 1SGYI 1XA6A 2ENZA 2UVOA 2V1CA 2JXDA 1SGQI 2NU3I 2W0TA 2ORVA 3OVOA 2DB6A 3TO9A 1UVFA 1Q9BA 3RU0A 1CE3A 2E5RA 1KBEA 2B0UC 2XRCA 1CGJI 1P9ZA 3UGIA 2NU0I 2SGEI 1TURA 3MEKA 1W4RA 1P9GA 1ULNA 2GKVA 4JCVE 3OXFA 1U5KA 2WVJA 2ERWA 2N17A 4SGBI 4E1RA 2N52A 1IW4A 1OVOA 1AN1I 3GOXA 1IY6A 1BMOA 3UGLA 3TO6A 4OVOA 5E3RA 4E1PA 1TOTA 1CHOI 2V53A 4WP4A 1TBRR 3OXGA 1K7TA 1HPTA 1OYVI 1SGEI 1Z2IA 2FNFX 5EX0A 2SGDI 1R0RI 4UXIA 1LR7A 2QQDA 1Y1BA 3R5AA 2ARPF 4UXJA 2KMPA 2JW6A 3QAHA 4DNCA 1CT2I 2RIJA 2ODDA 1HDLA 1BUSA 2NU4I 5DAEA 1PPFI 1TUSA 3PDNA 5FUYA 1RFHA 3UGDA 2KMRA 3UEYA 2QQ0A 1FARA 1TGSI 1SGNI 1CT4I 4A24A 2E73A 1ULMA 1TBOA 2GVIA 5J8CA 1UUCA 2GKTI 4L9MA 3TOBA 5CCMA 2VRWB 3SGQI 1XX6A 2SGPI 1FY7A 1WTJA 2JZMA 1W3SA 1DS3I 2JA1A 1FYBA 3QWPA 1CSOI 1SGDI 2CWFA 2DKVA 5E3QA 1UVGA 2X3TA 5FUWA 2KCXA 3UOEA 3VDPA 1Z7KB 3E59A 5HQ8A 4AMLA 2ENNA 1DS2I 2SGFI 3SGBI 1K7UA 3R5BA 3B4VC 2QPOA 1KBFA 1UHAA 1PTRA 1V1IA 3FSXA 7WGAA 5CCLA 3FC3A 2LEOA
chains in the Genus database with same CATH topology
4B6DA 3KY9A 4HGUA 4FKDA 2NU1I 1Y1CA 2P6AC 3BJIA 1NUBA 1VDDA 5FUVA 1TBNA 5JHWC 1SGPI 2YQPA 2ORWA 1YU6C 3E2IA 1V1HA 3QTLD 5EX3A 3UEJA 1TIHA 2J87A 1YTPA 1M8CA 5FUXA 2V1CC 3VE5A 2ELIA 1PCEA 4GI3C 1M8BA 1MT1A 2CJSC 2NU2I 2WCYA 1H0ZA 2OD1A 2ROWA 3UFFA 2L7XA 1KMAA 4UXHA 3CXLA 2YUUA 3D00A 3SEKC 1Y8FA 1CGII 1FAQA 3OXLA 2SGQI 1IY5A 1LR8A 2JYYA 2BUSA 2B8TA 3OL0A 1PJUA 1SGRI 2N1AB 1LR9A 2QQCA 3HH2C 3VDUA 1X74A 2J9RA 2KMQA 2OVOA 5HI7A 2N71A 2GKRI 2KMOA 2F3CI 2L8EA 1OMUA 2DIPA 2K9HA 1N13A 2LUYA 1XBTA 2UZ3A 1X4SA 3TJQA 1R79A 1TBQR 2A20A 2QQEA 1HJAI 1CT0I 2M5XA 1PTQA 1OMTA 1SGYI 1XA6A 2ENZA 2V1CA 2W0TA 2JXDA 1SGQI 2NU3I 3OVOA 2ORVA 5DAEA 2DB6A 1UVFA 3RU0A 1CE3A 2E5RA 1KBEA 2B0UC 2XRCA 1CGJI 3UGIA 2NU0I 2SGEI 1TURA 3MEKA 1W4RA 4JCVE 2GKVA 3OXFA 1U5KA 2WVJA 2ERWA 2N17A 4SGBI 4E1RA 2N52A 1IW4A 1OVOA 1AN1I 3GOXA 1IY6A 1BMOA 3UGLA 4OVOA 4E1PA 1TOTA 1CHOI 2V53A 1TBRR 3OXGA 1HPTA 1OYVI 1SGEI 2FNFX 5EX0A 2SGDI 1R0RI 4UXIA 1LR7A 2QQDA 1Y1BA 2ARPF 4UXJA 2KMPA 2JW6A 1CT2I 2ODDA 1HDLA 1BUSA 2NU4I 1PPFI 1TUSA 3PDNA 5FUYA 1RFHA 3UGDA 2KMRA 3UEYA 2QQ0A 1FARA 1TGSI 1SGNI 1CT4I 4A24A 2E73A 2GVIA 1TBOA 1UUCA 2GKTI 4L9MA 5CCMA 2VRWB 3SGQI 1XX6A 2SGPI 2JZMA 1W3SA 1DS3I 2JA1A 1FYBA 3QWPA 1CSOI 1SGDI 1UVGA 5FUWA 2KCXA 3VDPA 1Z7KB 3E59A 5HQ8A 2ENNA 1DS2I 2SGFI 3SGBI 3B4VC 2QPOA 1KBFA 1PTRA 1V1IA 5CCLA 3FC3A 2LEOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5FUY A;  3UGI A;  4B6D A;  3KY9 A;  1FAQ A;  1RFH A;  4FKD A;  3UGD A;  1W4R A;  3BJI A;  3UEY A;  2QQ0 A;  2WVJ A;  1FAR A;  2B8T A;  5FUV A;  2E73 A;  1TBN A;  2J9R A;  2GVI A;  1TBO A;  2ORW A;  4L9M A;  3UGL A;  2VRW B;  3E2I A;  1XX6 A;  3UEJ A;  1XBT A;  2UZ3 A;  2FNF X;  2J87 A;  2JA1 A;  1R79 A;  5FUX A;  2QQE A;  5FUW A;  4UXI A;  2ELI A;  2ENN A;  4UXJ A;  1PTQ A;  1XA6 A;  2ENZ A;  2ROW A;  2QPO A;  1KBF A;  3UFF A;  2ORV A;  2DB6 A;  4UXH A;  1PTR A;  3CXL A;  2YUU A;  1Y8F A;  1KBE A; 
#chains in the Genus database with same CATH topology
 4B6D A;  3KY9 A;  4HGU A;  2X52 A;  4FKD A;  2NU1 I;  1Y1C A;  2P6A C;  3BJI A;  3R5C A;  1NUB A;  1MJA A;  1NXU A;  2WGC A;  1VDD A;  1K7V A;  5FUV A;  1TBN A;  2PQ8 A;  1WGC A;  9WGA A;  5JHW C;  1SGP I;  2YQP A;  2ORW A;  1YU6 C;  3E2I A;  2RC4 A;  1V1H A;  3QTL D;  2OU2 A;  2Y0M A;  5EX3 A;  1MJ9 A;  3UEJ A;  1TIH A;  2J87 A;  1YTP A;  1M8C A;  3TOA A;  3R5D A;  5FUX A;  2V1C C;  1WGT A;  3VE5 A;  2ELI A;  1PCE A;  5J8F A;  4GI3 C;  1WKX A;  1M8B A;  3TO7 A;  1MT1 A;  2CJS C;  2NU2 I;  2WCY A;  5E3P A;  2OD1 A;  2ROW A;  1H0Z A;  3UFF A;  2L7X A;  1KMA A;  4UXH A;  2OZU A;  1S20 A;  3CXL A;  2YUU A;  3D00 A;  3SEK C;  1CGI I;  1Y8F A;  3FSY A;  1FAQ A;  3OXL A;  2SGQ I;  1IY5 A;  2LB7 A;  1LR8 A;  1HEV A;  2GIV A;  2JYY A;  2BUS A;  2B8T A;  3OL0 A;  1PJU A;  1SGR I;  2N1A B;  1LR9 A;  2CWG A;  2QQC A;  3HH2 C;  4MPI A;  1X74 A;  2CWH A;  2J9R A;  2KMQ A;  2OVO A;  5HI7 A;  3VDU A;  2N71 A;  2GKR I;  2KMO A;  2F3C I;  2L8E A;  1OMU A;  1ULK A;  2DIP A;  2K9H A;  1N13 A;  2LUY A;  1XBT A;  2UZ3 A;  1X4S A;  3TJQ A;  1R79 A;  1TBQ R;  2A20 A;  2QQE A;  1HJA I;  1CT0 I;  2M5X A;  1MJB A;  1PTQ A;  1OMT A;  1SGY I;  1XA6 A;  2ENZ A;  2UVO A;  2V1C A;  2JXD A;  1SGQ I;  2NU3 I;  2W0T A;  2ORV A;  3OVO A;  2DB6 A;  3TO9 A;  1UVF A;  1Q9B A;  3RU0 A;  1CE3 A;  2E5R A;  1KBE A;  2B0U C;  2XRC A;  1CGJ I;  1P9Z A;  3UGI A;  2NU0 I;  2SGE I;  1TUR A;  3MEK A;  1W4R A;  1P9G A;  1ULN A;  2GKV A;  4JCV E;  3OXF A;  1U5K A;  2WVJ A;  2ERW A;  2N17 A;  4SGB I;  4E1R A;  2N52 A;  1IW4 A;  1OVO A;  1AN1 I;  3GOX A;  1IY6 A;  1BMO A;  3UGL A;  3TO6 A;  4OVO A;  5E3R A;  4E1P A;  1TOT A;  1CHO I;  2V53 A;  4WP4 A;  1TBR R;  3OXG A;  1K7T A;  1HPT A;  1OYV I;  1SGE I;  1Z2I A;  2FNF X;  5EX0 A;  2SGD I;  1R0R I;  4UXI A;  1LR7 A;  2QQD A;  1Y1B A;  3R5A A;  2ARP F;  4UXJ A;  2KMP A;  2JW6 A;  3QAH A;  4DNC A;  1CT2 I;  2RIJ A;  2ODD A;  1HDL A;  1BUS A;  2NU4 I;  5DAE A;  1PPF I;  1TUS A;  3PDN A;  5FUY A;  1RFH A;  3UGD A;  2KMR A;  3UEY A;  2QQ0 A;  1FAR A;  1TGS I;  1SGN I;  1CT4 I;  4A24 A;  2E73 A;  1ULM A;  1TBO A;  2GVI A;  5J8C A;  1UUC A;  2GKT I;  4L9M A;  3TOB A;  5CCM A;  2VRW B;  3SGQ I;  1XX6 A;  2SGP I;  1FY7 A;  1WTJ A;  2JZM A;  1W3S A;  1DS3 I;  2JA1 A;  1FYB A;  3QWP A;  1CSO I;  1SGD I;  2CWF A;  2DKV A;  5E3Q A;  1UVG A;  2X3T A;  5FUW A;  2KCX A;  3UOE A;  3VDP A;  1Z7K B;  3E59 A;  5HQ8 A;  4AML A;  2ENN A;  1DS2 I;  2SGF I;  3SGB I;  1K7U A;  3R5B A;  3B4V C;  2QPO A;  1KBF A;  1UHA A;  1PTR A;  1V1I A;  3FSX A;  7WGA A;  5CCL A;  3FC3 A;  2LEO A; 
#chains in the Genus database with same CATH homology
 4B6D A;  3KY9 A;  4HGU A;  4FKD A;  2NU1 I;  1Y1C A;  2P6A C;  3BJI A;  1NUB A;  1VDD A;  5FUV A;  1TBN A;  5JHW C;  1SGP I;  2YQP A;  2ORW A;  1YU6 C;  3E2I A;  1V1H A;  3QTL D;  5EX3 A;  3UEJ A;  1TIH A;  2J87 A;  1YTP A;  1M8C A;  5FUX A;  2V1C C;  3VE5 A;  2ELI A;  1PCE A;  4GI3 C;  1M8B A;  1MT1 A;  2CJS C;  2NU2 I;  2WCY A;  1H0Z A;  2OD1 A;  2ROW A;  3UFF A;  2L7X A;  1KMA A;  4UXH A;  3CXL A;  2YUU A;  3D00 A;  3SEK C;  1Y8F A;  1CGI I;  1FAQ A;  3OXL A;  2SGQ I;  1IY5 A;  1LR8 A;  2JYY A;  2BUS A;  2B8T A;  3OL0 A;  1PJU A;  1SGR I;  2N1A B;  1LR9 A;  2QQC A;  3HH2 C;  3VDU A;  1X74 A;  2J9R A;  2KMQ A;  2OVO A;  5HI7 A;  2N71 A;  2GKR I;  2KMO A;  2F3C I;  2L8E A;  1OMU A;  2DIP A;  2K9H A;  1N13 A;  2LUY A;  1XBT A;  2UZ3 A;  1X4S A;  3TJQ A;  1R79 A;  1TBQ R;  2A20 A;  2QQE A;  1HJA I;  1CT0 I;  2M5X A;  1PTQ A;  1OMT A;  1SGY I;  1XA6 A;  2ENZ A;  2V1C A;  2W0T A;  2JXD A;  1SGQ I;  2NU3 I;  3OVO A;  2ORV A;  5DAE A;  2DB6 A;  1UVF A;  3RU0 A;  1CE3 A;  2E5R A;  1KBE A;  2B0U C;  2XRC A;  1CGJ I;  3UGI A;  2NU0 I;  2SGE I;  1TUR A;  3MEK A;  1W4R A;  4JCV E;  2GKV A;  3OXF A;  1U5K A;  2WVJ A;  2ERW A;  2N17 A;  4SGB I;  4E1R A;  2N52 A;  1IW4 A;  1OVO A;  1AN1 I;  3GOX A;  1IY6 A;  1BMO A;  3UGL A;  4OVO A;  4E1P A;  1TOT A;  1CHO I;  2V53 A;  1TBR R;  3OXG A;  1HPT A;  1OYV I;  1SGE I;  2FNF X;  5EX0 A;  2SGD I;  1R0R I;  4UXI A;  1LR7 A;  2QQD A;  1Y1B A;  2ARP F;  4UXJ A;  2KMP A;  2JW6 A;  1CT2 I;  2ODD A;  1HDL A;  1BUS A;  2NU4 I;  1PPF I;  1TUS A;  3PDN A;  5FUY A;  1RFH A;  3UGD A;  2KMR A;  3UEY A;  2QQ0 A;  1FAR A;  1TGS I;  1SGN I;  1CT4 I;  4A24 A;  2E73 A;  2GVI A;  1TBO A;  1UUC A;  2GKT I;  4L9M A;  5CCM A;  2VRW B;  3SGQ I;  1XX6 A;  2SGP I;  2JZM A;  1W3S A;  1DS3 I;  2JA1 A;  1FYB A;  3QWP A;  1CSO I;  1SGD I;  1UVG A;  5FUW A;  2KCX A;  3VDP A;  1Z7K B;  3E59 A;  5HQ8 A;  2ENN A;  1DS2 I;  2SGF I;  3SGB I;  3B4V C;  2QPO A;  1KBF A;  1PTR A;  1V1I A;  5CCL A;  3FC3 A;  2LEO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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