2N17A

Nmr structure of a kazal-type serine protease inhibitor from the subterranean termite defense gland of coptotermes formosanus shiraki soldiers
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
56
structure length
56
Chain Sequence
CQLFCPMIYAPICATDGVSQRTFSNPCDLKVYNCWNPDNPYKEVKVGECDDANKPV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Lysozyme-Protease Inhibitor Protein
publication title A Kazal-Type Serine Protease Inhibitor from the Defense Gland Secretion of the Subterranean Termite Coptotermes formosanus Shiraki.
pubmed doi rcsb
source organism Coptotermes formosanus
total genus 6
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 2015-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07648 Kazal_2 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2n17A00
2WCYA 1LR7A 2KMOA 1KMAA 2KCXA 1SGNI 2NU3I 5JHWC 2KMQA 1MT1A 2NU0I 2JYYA 1Z7KB 1IY5A 3QTLD 3SGBI 1N13A 1SGEI 1UUCA 3SEKC 1CT4I 1IW4A 3B4VC 1OMTA 2JZMA 2JXDA 4SGBI 1BUSA 2SGQI 1OYVI 3OVOA 2B0UC 1TBQR 2QQDA 1DS2I 1NUBA 2SGEI 1Y1BA 1CGJI 1SGDI 2SGDI 2ERWA 2F3CI 2ARPF 1YTPA 1FYBA 2N52A 2GKVA 2P6AC 1TURA 1AN1I 1HDLA 1CHOI 1PPFI 1OMUA 2NU2I 1LR9A 1H0ZA 1OVOA 1CSOI 1UVGA 3TJQA 1CT0I 1TBRR 1YU6C 3SGQI 1CGII 2SGPI 1CE3A 1IY6A 1HPTA 1BMOA 4OVOA 2KMRA 1SGQI 1CT2I 1TUSA 1DS3I 1R0RI 1HJAI 2BUSA 2QQCA 1M8BA 1UVFA 2NU1I 4GI3C 2LEOA 2M5XA 2SGFI 5DAEA 1TIHA 2N17A 1M8CA 1PJUA 4HGUA 2N71A 1LR8A 2GKRI 1SGRI 2NU4I 2GKTI 3HH2C 2XRCA 1TGSI 1SGYI 1Y1CA 1PCEA 2OVOA 2V53A 1SGPI 2KMPA
chains in the Genus database with same CATH superfamily
2WCYA 4MPIA 1LR7A 2KMOA 2RIJA 3E59A 3TO6A 1KMAA 2Y0MA 2KCXA 1SGNI 1XA6A 2J9RA 2NU3I 4UXHA 3TOBA 3QWPA 2DKVA 5E3QA 5JHWC 2KMQA 2OD1A 2YUUA 1ULKA 4E1PA 1MT1A 1KBEA 1XX6A 1W3SA 3FSYA 2NU0I 2JYYA 1Q9BA 1Z7KB 3R5DA 1IY5A 3UEJA 3UGIA 1NXUA 4DNCA 3FC3A 2A20A 3VDPA 3KY9A 3MEKA 1HEVA 2ENNA 3CXLA 2LUYA 3QTLD 1N13A 3SGBI 1K7TA 1SGEI 1MJ9A 2FNFX 2N1AB 2YQPA 1UUCA 1P9ZA 1CT4I 3SEKC 5J8FA 1IW4A 2DIPA 3QAHA 3B4VC 1OMTA 2JZMA 2JXDA 4SGBI 1BUSA 1PTQA 2SGQI 1OYVI 3OVOA 1TBOA 2JA1A 2CWHA 1ULNA 2B0UC 3RU0A 4UXIA 1V1HA 1TBQR 2QQDA 1DS2I 1NUBA 1K7VA 2SGEI 1Y8FA 2V1CA 2X3TA 4AMLA 4FKDA 1WGCA 1Y1BA 2UZ3A 2ROWA 2GIVA 1CGJI 1MJBA 2ORWA 5EX0A 5E3RA 1SGDI 3OXGA 2SGDI 2WVJA 2ERWA 2F3CI 2CWFA 5FUWA 2ARPF 4WP4A 1YTPA 3OXFA 2OZUA 3VDUA 2N52A 4A24A 2GKVA 4E1RA 1FYBA 3VE5A 2P6AC 4UXJA 1TURA 1AN1I 1V1IA 1CHOI 1PPFI 1OMUA 1U5KA 1LR9A 2NU2I 4B6DA 3GOXA 2QPOA 1H0ZA 1OVOA 1CSOI 1ULMA 1UVGA 2ODDA 2E5RA 2J87A 5CCMA 9WGAA 5EX3A 3TJQA 1FARA 1MJAA 1CT0I 1TBRR 3TO9A 2X52A 1YU6C 1X74A 1X4SA 3SGQI 3UGDA 1RFHA 1CGII 2SGPI 1CE3A 1FAQA 4JCVE 2ORVA 1HPTA 2QQ0A 1S20A 1IY6A 1BMOA 4OVOA 7WGAA 1UHAA 3PDNA 3R5CA 2KMRA 1SGQI 3OXLA 3TOAA 3FSXA 1K7UA 5CCLA 1CT2I 3UEYA 2CWGA 2QQEA 1TUSA 1DS3I 3D00A 5E3PA 5FUVA 1R0RI 1HJAI 2ELIA 2BUSA 2QQCA 4L9MA 2PQ8A 2K9HA 2GVIA 1TOTA 2B8TA 1VDDA 3UFFA 1HDLA 2OU2A 1M8BA 2LB7A 1UVFA 2ENZA 2NU1I 2WGCA 1TBNA 2DB6A 3OL0A 1Z2IA 2E73A 3UOEA 3UGLA 4GI3C 2LEOA 5J8CA 1R79A 2CJSC 2M5XA 2SGFI 5FUYA 5DAEA 1W4RA 1TIHA 5HI7A 1WGTA 2N17A 1M8CA 5HQ8A 1PJUA 4HGUA 2L7XA 1P9GA 2W0TA 1WKXA 2N71A 1LR8A 1XBTA 1FY7A 2UVOA 3R5BA 2GKRI 1SGRI 2NU4I 2GKTI 3BJIA 3HH2C 1WTJA 2L8EA 3R5AA 1KBFA 2XRCA 5FUXA 1TGSI 3E2IA 3TO7A 2V1CC 2VRWB 2RC4A 1SGYI 1Y1CA 1PTRA 1PCEA 2JW6A 2OVOA 1SGPI 2V53A 2KMPA
chains in the Genus database with same CATH topology
2WCYA 1LR7A 2KMOA 3E59A 1KMAA 2KCXA 1SGNI 1XA6A 2J9RA 2NU3I 4UXHA 3QWPA 5JHWC 2KMQA 2OD1A 2YUUA 4E1PA 1MT1A 1KBEA 1XX6A 1W3SA 2NU0I 2JYYA 1Z7KB 1IY5A 3UEJA 3UGIA 3FC3A 2A20A 3VDPA 3KY9A 3MEKA 2ENNA 3CXLA 2LUYA 3QTLD 1N13A 3SGBI 1SGEI 2FNFX 2N1AB 2YQPA 1UUCA 3SEKC 1CT4I 1IW4A 2DIPA 3B4VC 1OMTA 2JZMA 2JXDA 4SGBI 1BUSA 1PTQA 2SGQI 1OYVI 3OVOA 1TBOA 2JA1A 2B0UC 3RU0A 4UXIA 1V1HA 1TBQR 2QQDA 1DS2I 1NUBA 2SGEI 1Y8FA 2V1CA 4FKDA 1Y1BA 2UZ3A 2ROWA 1CGJI 2ORWA 5EX0A 1SGDI 3OXGA 2SGDI 2WVJA 2ERWA 2F3CI 5FUWA 2ARPF 1YTPA 3OXFA 3VDUA 4A24A 2N52A 4E1RA 2GKVA 1FYBA 3VE5A 2P6AC 4UXJA 1TURA 1AN1I 1V1IA 1CHOI 1PPFI 1OMUA 1U5KA 1LR9A 2NU2I 4B6DA 3GOXA 2QPOA 1H0ZA 1OVOA 1CSOI 1UVGA 2ODDA 2E5RA 2J87A 5CCMA 5EX3A 3TJQA 1FARA 1CT0I 1TBRR 1YU6C 1X74A 1X4SA 3SGQI 3UGDA 1RFHA 1CGII 2SGPI 1CE3A 1FAQA 4JCVE 2ORVA 1HPTA 2QQ0A 1IY6A 1BMOA 4OVOA 3PDNA 2KMRA 1SGQI 3OXLA 5CCLA 1CT2I 3UEYA 2QQEA 1TUSA 1DS3I 3D00A 5FUVA 1R0RI 1HJAI 2ELIA 2BUSA 2QQCA 4L9MA 2K9HA 2GVIA 1TOTA 2B8TA 1VDDA 3UFFA 1HDLA 1M8BA 1UVFA 2ENZA 2NU1I 1TBNA 2DB6A 3OL0A 2E73A 3UGLA 4GI3C 2LEOA 1R79A 2CJSC 2M5XA 2SGFI 5FUYA 5DAEA 1W4RA 1TIHA 5HI7A 2N17A 1M8CA 5HQ8A 1PJUA 4HGUA 2L7XA 2W0TA 2N71A 1LR8A 1XBTA 2GKRI 1SGRI 2NU4I 2GKTI 3BJIA 3HH2C 2L8EA 1KBFA 2XRCA 5FUXA 1TGSI 3E2IA 2V1CC 2VRWB 1SGYI 1Y1CA 1PTRA 1PCEA 2JW6A 2OVOA 1SGPI 2V53A 2KMPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WCY A;  1LR7 A;  2KMO A;  1KMA A;  2KCX A;  1SGN I;  2NU3 I;  5JHW C;  2KMQ A;  1MT1 A;  2NU0 I;  2JYY A;  1Z7K B;  1IY5 A;  3QTL D;  3SGB I;  1N13 A;  1SGE I;  1UUC A;  3SEK C;  1CT4 I;  1IW4 A;  3B4V C;  1OMT A;  2JZM A;  2JXD A;  4SGB I;  1BUS A;  2SGQ I;  1OYV I;  3OVO A;  2B0U C;  1TBQ R;  2QQD A;  1DS2 I;  1NUB A;  2SGE I;  1Y1B A;  1CGJ I;  1SGD I;  2SGD I;  2ERW A;  2F3C I;  2ARP F;  1YTP A;  1FYB A;  2N52 A;  2GKV A;  2P6A C;  1TUR A;  1AN1 I;  1HDL A;  1CHO I;  1PPF I;  1OMU A;  2NU2 I;  1LR9 A;  1H0Z A;  1OVO A;  1CSO I;  1UVG A;  3TJQ A;  1CT0 I;  1TBR R;  1YU6 C;  3SGQ I;  1CGI I;  2SGP I;  1CE3 A;  1IY6 A;  1HPT A;  1BMO A;  4OVO A;  2KMR A;  1SGQ I;  1CT2 I;  1TUS A;  1DS3 I;  1R0R I;  1HJA I;  2BUS A;  2QQC A;  1M8B A;  1UVF A;  2NU1 I;  4GI3 C;  2LEO A;  2M5X A;  2SGF I;  5DAE A;  1TIH A;  2N17 A;  1M8C A;  1PJU A;  4HGU A;  2N71 A;  1LR8 A;  2GKR I;  1SGR I;  2NU4 I;  2GKT I;  3HH2 C;  2XRC A;  1TGS I;  1SGY I;  1Y1C A;  1PCE A;  2OVO A;  2V53 A;  1SGP I;  2KMP A; 
#chains in the Genus database with same CATH topology
 2WCY A;  4MPI A;  1LR7 A;  2KMO A;  2RIJ A;  3E59 A;  3TO6 A;  1KMA A;  2Y0M A;  2KCX A;  1SGN I;  1XA6 A;  2J9R A;  2NU3 I;  4UXH A;  3TOB A;  3QWP A;  2DKV A;  5E3Q A;  5JHW C;  2KMQ A;  2OD1 A;  2YUU A;  1ULK A;  4E1P A;  1MT1 A;  1KBE A;  1XX6 A;  1W3S A;  3FSY A;  2NU0 I;  2JYY A;  1Q9B A;  1Z7K B;  3R5D A;  1IY5 A;  3UEJ A;  3UGI A;  1NXU A;  4DNC A;  3FC3 A;  2A20 A;  3VDP A;  3KY9 A;  3MEK A;  1HEV A;  2ENN A;  3CXL A;  2LUY A;  3QTL D;  1N13 A;  3SGB I;  1K7T A;  1SGE I;  1MJ9 A;  2FNF X;  2N1A B;  2YQP A;  1UUC A;  1P9Z A;  1CT4 I;  3SEK C;  5J8F A;  1IW4 A;  2DIP A;  3QAH A;  3B4V C;  1OMT A;  2JZM A;  2JXD A;  4SGB I;  1BUS A;  1PTQ A;  2SGQ I;  1OYV I;  3OVO A;  1TBO A;  2JA1 A;  2CWH A;  1ULN A;  2B0U C;  3RU0 A;  4UXI A;  1V1H A;  1TBQ R;  2QQD A;  1DS2 I;  1NUB A;  1K7V A;  2SGE I;  1Y8F A;  2V1C A;  2X3T A;  4AML A;  4FKD A;  1WGC A;  1Y1B A;  2UZ3 A;  2ROW A;  2GIV A;  1CGJ I;  1MJB A;  2ORW A;  5EX0 A;  5E3R A;  1SGD I;  3OXG A;  2SGD I;  2WVJ A;  2ERW A;  2F3C I;  2CWF A;  5FUW A;  2ARP F;  4WP4 A;  1YTP A;  3OXF A;  2OZU A;  3VDU A;  2N52 A;  4A24 A;  2GKV A;  4E1R A;  1FYB A;  3VE5 A;  2P6A C;  4UXJ A;  1TUR A;  1AN1 I;  1V1I A;  1CHO I;  1PPF I;  1OMU A;  1U5K A;  1LR9 A;  2NU2 I;  4B6D A;  3GOX A;  2QPO A;  1H0Z A;  1OVO A;  1CSO I;  1ULM A;  1UVG A;  2ODD A;  2E5R A;  2J87 A;  5CCM A;  9WGA A;  5EX3 A;  3TJQ A;  1FAR A;  1MJA A;  1CT0 I;  1TBR R;  3TO9 A;  2X52 A;  1YU6 C;  1X74 A;  1X4S A;  3SGQ I;  3UGD A;  1RFH A;  1CGI I;  2SGP I;  1CE3 A;  1FAQ A;  4JCV E;  2ORV A;  1HPT A;  2QQ0 A;  1S20 A;  1IY6 A;  1BMO A;  4OVO A;  7WGA A;  1UHA A;  3PDN A;  3R5C A;  2KMR A;  1SGQ I;  3OXL A;  3TOA A;  3FSX A;  1K7U A;  5CCL A;  1CT2 I;  3UEY A;  2CWG A;  2QQE A;  1TUS A;  1DS3 I;  3D00 A;  5E3P A;  5FUV A;  1R0R I;  1HJA I;  2ELI A;  2BUS A;  2QQC A;  4L9M A;  2PQ8 A;  2K9H A;  2GVI A;  1TOT A;  2B8T A;  1VDD A;  3UFF A;  1HDL A;  2OU2 A;  1M8B A;  2LB7 A;  1UVF A;  2ENZ A;  2NU1 I;  2WGC A;  1TBN A;  2DB6 A;  3OL0 A;  1Z2I A;  2E73 A;  3UOE A;  3UGL A;  4GI3 C;  2LEO A;  5J8C A;  1R79 A;  2CJS C;  2M5X A;  2SGF I;  5FUY A;  5DAE A;  1W4R A;  1TIH A;  5HI7 A;  1WGT A;  2N17 A;  1M8C A;  5HQ8 A;  1PJU A;  4HGU A;  2L7X A;  1P9G A;  2W0T A;  1WKX A;  2N71 A;  1LR8 A;  1XBT A;  1FY7 A;  2UVO A;  3R5B A;  2GKR I;  1SGR I;  2NU4 I;  2GKT I;  3BJI A;  3HH2 C;  1WTJ A;  2L8E A;  3R5A A;  1KBF A;  2XRC A;  5FUX A;  1TGS I;  3E2I A;  3TO7 A;  2V1C C;  2VRW B;  2RC4 A;  1SGY I;  1Y1C A;  1PTR A;  1PCE A;  2JW6 A;  2OVO A;  1SGP I;  2V53 A;  2KMP A; 
#chains in the Genus database with same CATH homology
 2WCY A;  1LR7 A;  2KMO A;  3E59 A;  1KMA A;  2KCX A;  1SGN I;  1XA6 A;  2J9R A;  2NU3 I;  4UXH A;  3QWP A;  5JHW C;  2KMQ A;  2OD1 A;  2YUU A;  4E1P A;  1MT1 A;  1KBE A;  1XX6 A;  1W3S A;  2NU0 I;  2JYY A;  1Z7K B;  1IY5 A;  3UEJ A;  3UGI A;  3FC3 A;  2A20 A;  3VDP A;  3KY9 A;  3MEK A;  2ENN A;  3CXL A;  2LUY A;  3QTL D;  1N13 A;  3SGB I;  1SGE I;  2FNF X;  2N1A B;  2YQP A;  1UUC A;  3SEK C;  1CT4 I;  1IW4 A;  2DIP A;  3B4V C;  1OMT A;  2JZM A;  2JXD A;  4SGB I;  1BUS A;  1PTQ A;  2SGQ I;  1OYV I;  3OVO A;  1TBO A;  2JA1 A;  2B0U C;  3RU0 A;  4UXI A;  1V1H A;  1TBQ R;  2QQD A;  1DS2 I;  1NUB A;  2SGE I;  1Y8F A;  2V1C A;  4FKD A;  1Y1B A;  2UZ3 A;  2ROW A;  1CGJ I;  2ORW A;  5EX0 A;  1SGD I;  3OXG A;  2SGD I;  2WVJ A;  2ERW A;  2F3C I;  5FUW A;  2ARP F;  1YTP A;  3OXF A;  3VDU A;  4A24 A;  2N52 A;  4E1R A;  2GKV A;  1FYB A;  3VE5 A;  2P6A C;  4UXJ A;  1TUR A;  1AN1 I;  1V1I A;  1CHO I;  1PPF I;  1OMU A;  1U5K A;  1LR9 A;  2NU2 I;  4B6D A;  3GOX A;  2QPO A;  1H0Z A;  1OVO A;  1CSO I;  1UVG A;  2ODD A;  2E5R A;  2J87 A;  5CCM A;  5EX3 A;  3TJQ A;  1FAR A;  1CT0 I;  1TBR R;  1YU6 C;  1X74 A;  1X4S A;  3SGQ I;  3UGD A;  1RFH A;  1CGI I;  2SGP I;  1CE3 A;  1FAQ A;  4JCV E;  2ORV A;  1HPT A;  2QQ0 A;  1IY6 A;  1BMO A;  4OVO A;  3PDN A;  2KMR A;  1SGQ I;  3OXL A;  5CCL A;  1CT2 I;  3UEY A;  2QQE A;  1TUS A;  1DS3 I;  3D00 A;  5FUV A;  1R0R I;  1HJA I;  2ELI A;  2BUS A;  2QQC A;  4L9M A;  2K9H A;  2GVI A;  1TOT A;  2B8T A;  1VDD A;  3UFF A;  1HDL A;  1M8B A;  1UVF A;  2ENZ A;  2NU1 I;  1TBN A;  2DB6 A;  3OL0 A;  2E73 A;  3UGL A;  4GI3 C;  2LEO A;  1R79 A;  2CJS C;  2M5X A;  2SGF I;  5FUY A;  5DAE A;  1W4R A;  1TIH A;  5HI7 A;  2N17 A;  1M8C A;  5HQ8 A;  1PJU A;  4HGU A;  2L7X A;  2W0T A;  2N71 A;  1LR8 A;  1XBT A;  2GKR I;  1SGR I;  2NU4 I;  2GKT I;  3BJI A;  3HH2 C;  2L8E A;  1KBF A;  2XRC A;  5FUX A;  1TGS I;  3E2I A;  2V1C C;  2VRW B;  1SGY I;  1Y1C A;  1PTR A;  1PCE A;  2JW6 A;  2OVO A;  1SGP I;  2V53 A;  2KMP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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