2N17A

Nmr structure of a kazal-type serine protease inhibitor from the subterranean termite defense gland of coptotermes formosanus shiraki soldiers
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
56
structure length
56
Chain Sequence
CQLFCPMIYAPICATDGVSQRTFSNPCDLKVYNCWNPDNPYKEVKVGECDDANKPV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Coptotermes formosanus
publication title A Kazal-Type Serine Protease Inhibitor from the Defense Gland Secretion of the Subterranean Termite Coptotermes formosanus Shiraki.
pubmed doi rcsb
molecule keywords Lysozyme-Protease Inhibitor Protein
total genus 6
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 2015-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07648 Kazal_2 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2n17A00
2F3CI 4HGUA 1BMOA 3SEKC 1FYBA 1DS2I 2SGDI 1MT1A 1OMTA 1OMUA 1TIHA 1YTPA 1SGPI 2NU2I 3SGBI 1OVOA 5JHWC 2GKTI 1TBQR 2JYYA 1PCEA 2NU1I 1IY5A 1M8BA 2KCXA 2SGPI 1CHOI 1M8CA 1HDLA 1CT2I 2KMOA 2JZMA 1CGJI 2NU4I 1TGSI 2OVOA 2N17A 2NU3I 2SGQI 2BUSA 2LEOA 4SGBI 2QQDA 2GKRI 1N13A 1SGDI 1SGYI 3SGQI 1NUBA 2KMPA 1CT4I 3B4VC 1LR8A 2ERWA 1R0RI 1UUCA 1Z7KB 1HPTA 1Y1BA 1HJAI 1CSOI 2N52A 1DS3I 2N71A 4OVOA 1IY6A 1SGQI 1TURA 2XRCA 1SGNI 2NU0I 1SGEI 3QTLD 4GI3C 1LR9A 3OVOA 1BUSA 1KMAA 1H0ZA 1IW4A 1AN1I 5DAEA 2B0UC 3HH2C 2QQCA 2SGEI 1CE3A 1UVFA 2KMRA 1PPFI 1CT0I 2SGFI 2M5XA 1UVGA 2KMQA 1SGRI 1OYVI 1CGII 2GKVA 2JXDA 1TBRR 2P6AC 1Y1CA 1LR7A 2ARPF 2WCYA 1TUSA 3TJQA 1YU6C 2V53A 1PJUA
chains in the Genus database with same CATH superfamily
2F3CI 3GOXA 1K7UA 2YQPA 3QWPA 4DNCA 4HGUA 1BMOA 3SEKC 2ENZA 2CWFA 2B8TA 2YUUA 3QAHA 5EX0A 1FYBA 1MJAA 3FC3A 2DIPA 1ULNA 1DS2I 2SGDI 3PDNA 1MT1A 4UXIA 1OMTA 1OMUA 1TIHA 1YTPA 2X3TA 3TO6A 2OD1A 1SGPI 2NU2I 3SGBI 1OVOA 3UGDA 2CJSC 4B6DA 3OXGA 2GKTI 1TBQR 2JYYA 5JHWC 2N1AB 1PCEA 2NU1I 1V1HA 5EX3A 3UFFA 1IY5A 1RFHA 1M8BA 2J87A 1VDDA 3UGIA 5HQ8A 2KCXA 1KBFA 3R5AA 1XA6A 1HEVA 2SGPI 2GIVA 2V1CA 1CHOI 4JCVE 4A24A 1M8CA 1HDLA 3RU0A 1CT2I 2KMOA 5J8CA 2JZMA 1CGJI 2NU4I 2CWHA 2L7XA 1X74A 2V1CC 2WVJA 4AMLA 1TGSI 2OVOA 3D00A 1W3SA 3VDUA 2RIJA 2QPOA 2X52A 5CCLA 2JA1A 2N17A 7WGAA 1WGCA 2GVIA 4UXJA 9WGAA 1TBNA 2NU3I 2SGQI 5FUYA 2BUSA 5FUVA 4E1PA 2ORVA 1MJBA 5E3RA 3TOBA 2LEOA 1S20A 1Y8FA 1WKXA 3FSYA 2QQDA 1PTRA 4SGBI 2GKRI 2OZUA 1N13A 1X4SA 3TO9A 1SGDI 1SGYI 3SGQI 1FAQA 3E2IA 1Z2IA 1NUBA 5E3PA 1R79A 2KMPA 3VDPA 1WGTA 1CT4I 3B4VC 1UHAA 5J8FA 1LR8A 1P9ZA 2ERWA 3TO7A 4WP4A 1R0RI 2ENNA 1UUCA 1Z7KB 2ELIA 1HPTA 3FSXA 5E3QA 1Y1BA 1HJAI 1CSOI 2N52A 1DS3I 2L8EA 2N71A 1NXUA 1WTJA 2VRWB 4OVOA 1IY6A 3R5BA 1SGQI 1TURA 2OU2A 2E5RA 2XRCA 2K9HA 1ULKA 1FARA 1SGNI 2NU0I 1SGEI 3QTLD 4GI3C 1K7VA 1LR9A 2CWGA 3E59A 1W4RA 3OVOA 1TBOA 1K7TA 1XBTA 1ULMA 2PQ8A 2E73A 1BUSA 1KMAA 2LB7A 1P9GA 2QQEA 2FNFX 3UEJA 3MEKA 1TOTA 2WGCA 3UGLA 1H0ZA 1MJ9A 2QQ0A 1PTQA 2LUYA 3KY9A 1IW4A 1AN1I 2ORWA 5DAEA 2B0UC 3HH2C 3R5DA 3UOEA 2QQCA 2SGEI 2UVOA 1Q9BA 3OXFA 3VE5A 1CE3A 1UVFA 3OL0A 3OXLA 2KMRA 1PPFI 1FY7A 2ROWA 4MPIA 5HI7A 3UEYA 2JW6A 1CT0I 2SGFI 2M5XA 2RC4A 2UZ3A 3TOAA 3CXLA 1UVGA 1XX6A 1KBEA 2KMQA 2Y0MA 1SGRI 1OYVI 2J9RA 2ODDA 1CGII 4E1RA 2DB6A 2GKVA 1TBRR 2JXDA 2P6AC 1U5KA 1V1IA 2W0TA 5CCMA 3BJIA 2A20A 2DKVA 1Y1CA 1LR7A 2ARPF 4FKDA 5FUWA 2WCYA 1TUSA 3TJQA 4L9MA 1YU6C 2V53A 4UXHA 5FUXA 3R5CA 1PJUA
chains in the Genus database with same CATH topology
2F3CI 3GOXA 3QWPA 2YQPA 4HGUA 1BMOA 3SEKC 2ENZA 2B8TA 2YUUA 5EX0A 1FYBA 3FC3A 2DIPA 1DS2I 2SGDI 3PDNA 1MT1A 4UXIA 1OMTA 1OMUA 1TIHA 1YTPA 2OD1A 1SGPI 2NU2I 3SGBI 1OVOA 3UGDA 2CJSC 4B6DA 3OXGA 2GKTI 1TBQR 2JYYA 5JHWC 2N1AB 1PCEA 2NU1I 1V1HA 5EX3A 3UFFA 1IY5A 1RFHA 1M8BA 2J87A 1VDDA 3UGIA 5HQ8A 2KCXA 1KBFA 1XA6A 2SGPI 2V1CA 4A24A 1CHOI 4JCVE 1M8CA 1HDLA 3RU0A 1CT2I 2KMOA 2JZMA 1CGJI 2NU4I 2L7XA 2V1CC 1X74A 2WVJA 1TGSI 2OVOA 3D00A 1W3SA 3VDUA 2QPOA 5CCLA 2JA1A 2N17A 2GVIA 4UXJA 1TBNA 2NU3I 2SGQI 5FUYA 2BUSA 5FUVA 4E1PA 2ORVA 2LEOA 1Y8FA 4SGBI 2QQDA 1PTRA 2GKRI 1N13A 1X4SA 1SGDI 1SGYI 3SGQI 1FAQA 3E2IA 1NUBA 1R79A 2KMPA 3VDPA 1CT4I 3B4VC 1LR8A 2ERWA 1R0RI 2ENNA 1UUCA 1Z7KB 2ELIA 1HPTA 1Y1BA 1HJAI 1CSOI 2N52A 1DS3I 2L8EA 2N71A 2VRWB 4OVOA 1IY6A 1SGQI 1TURA 2XRCA 2E5RA 2K9HA 1FARA 1SGNI 2NU0I 1SGEI 3QTLD 4GI3C 1LR9A 3E59A 3OVOA 1W4RA 1TBOA 1XBTA 1BUSA 2E73A 1KMAA 2QQEA 2FNFX 3UEJA 3MEKA 1TOTA 3UGLA 1H0ZA 2QQ0A 1PTQA 2LUYA 3KY9A 1IW4A 1AN1I 2ORWA 5DAEA 2B0UC 3HH2C 2QQCA 2SGEI 1CE3A 3OXFA 3VE5A 1UVFA 3OL0A 3OXLA 2KMRA 1PPFI 2ROWA 5HI7A 3UEYA 2JW6A 1CT0I 2SGFI 2M5XA 2UZ3A 3CXLA 1UVGA 1XX6A 1KBEA 2KMQA 1SGRI 1OYVI 2J9RA 2ODDA 1CGII 4E1RA 2DB6A 2GKVA 1TBRR 2JXDA 2P6AC 1U5KA 1V1IA 2W0TA 5CCMA 3BJIA 2A20A 1Y1CA 1LR7A 2ARPF 4FKDA 5FUWA 2WCYA 1TUSA 3TJQA 4L9MA 1YU6C 2V53A 4UXHA 5FUXA 1PJUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F3C I;  4HGU A;  1BMO A;  3SEK C;  1FYB A;  1DS2 I;  2SGD I;  1MT1 A;  1OMT A;  1OMU A;  1TIH A;  1YTP A;  1SGP I;  2NU2 I;  3SGB I;  1OVO A;  5JHW C;  2GKT I;  1TBQ R;  2JYY A;  1PCE A;  2NU1 I;  1IY5 A;  1M8B A;  2KCX A;  2SGP I;  1CHO I;  1M8C A;  1HDL A;  1CT2 I;  2KMO A;  2JZM A;  1CGJ I;  2NU4 I;  1TGS I;  2OVO A;  2N17 A;  2NU3 I;  2SGQ I;  2BUS A;  2LEO A;  4SGB I;  2QQD A;  2GKR I;  1N13 A;  1SGD I;  1SGY I;  3SGQ I;  1NUB A;  2KMP A;  1CT4 I;  3B4V C;  1LR8 A;  2ERW A;  1R0R I;  1UUC A;  1Z7K B;  1HPT A;  1Y1B A;  1HJA I;  1CSO I;  2N52 A;  1DS3 I;  2N71 A;  4OVO A;  1IY6 A;  1SGQ I;  1TUR A;  2XRC A;  1SGN I;  2NU0 I;  1SGE I;  3QTL D;  4GI3 C;  1LR9 A;  3OVO A;  1BUS A;  1KMA A;  1H0Z A;  1IW4 A;  1AN1 I;  5DAE A;  2B0U C;  3HH2 C;  2QQC A;  2SGE I;  1CE3 A;  1UVF A;  2KMR A;  1PPF I;  1CT0 I;  2SGF I;  2M5X A;  1UVG A;  2KMQ A;  1SGR I;  1OYV I;  1CGI I;  2GKV A;  2JXD A;  1TBR R;  2P6A C;  1Y1C A;  1LR7 A;  2ARP F;  2WCY A;  1TUS A;  3TJQ A;  1YU6 C;  2V53 A;  1PJU A; 
#chains in the Genus database with same CATH topology
 2F3C I;  3GOX A;  1K7U A;  2YQP A;  3QWP A;  4DNC A;  4HGU A;  1BMO A;  3SEK C;  2ENZ A;  2CWF A;  2B8T A;  2YUU A;  3QAH A;  5EX0 A;  1FYB A;  1MJA A;  3FC3 A;  2DIP A;  1ULN A;  1DS2 I;  2SGD I;  3PDN A;  1MT1 A;  4UXI A;  1OMT A;  1OMU A;  1TIH A;  1YTP A;  2X3T A;  3TO6 A;  2OD1 A;  1SGP I;  2NU2 I;  3SGB I;  1OVO A;  3UGD A;  2CJS C;  4B6D A;  3OXG A;  2GKT I;  1TBQ R;  2JYY A;  5JHW C;  2N1A B;  1PCE A;  2NU1 I;  1V1H A;  5EX3 A;  3UFF A;  1IY5 A;  1RFH A;  1M8B A;  2J87 A;  1VDD A;  3UGI A;  5HQ8 A;  2KCX A;  1KBF A;  3R5A A;  1XA6 A;  1HEV A;  2SGP I;  2GIV A;  2V1C A;  1CHO I;  4JCV E;  4A24 A;  1M8C A;  1HDL A;  3RU0 A;  1CT2 I;  2KMO A;  5J8C A;  2JZM A;  1CGJ I;  2NU4 I;  2CWH A;  2L7X A;  1X74 A;  2V1C C;  2WVJ A;  4AML A;  1TGS I;  2OVO A;  3D00 A;  1W3S A;  3VDU A;  2RIJ A;  2QPO A;  2X52 A;  5CCL A;  2JA1 A;  2N17 A;  7WGA A;  1WGC A;  2GVI A;  4UXJ A;  9WGA A;  1TBN A;  2NU3 I;  2SGQ I;  5FUY A;  2BUS A;  5FUV A;  4E1P A;  2ORV A;  1MJB A;  5E3R A;  3TOB A;  2LEO A;  1S20 A;  1Y8F A;  1WKX A;  3FSY A;  2QQD A;  1PTR A;  4SGB I;  2GKR I;  2OZU A;  1N13 A;  1X4S A;  3TO9 A;  1SGD I;  1SGY I;  3SGQ I;  1FAQ A;  3E2I A;  1Z2I A;  1NUB A;  5E3P A;  1R79 A;  2KMP A;  3VDP A;  1WGT A;  1CT4 I;  3B4V C;  1UHA A;  5J8F A;  1LR8 A;  1P9Z A;  2ERW A;  3TO7 A;  4WP4 A;  1R0R I;  2ENN A;  1UUC A;  1Z7K B;  2ELI A;  1HPT A;  3FSX A;  5E3Q A;  1Y1B A;  1HJA I;  1CSO I;  2N52 A;  1DS3 I;  2L8E A;  2N71 A;  1NXU A;  1WTJ A;  2VRW B;  4OVO A;  1IY6 A;  3R5B A;  1SGQ I;  1TUR A;  2OU2 A;  2E5R A;  2XRC A;  2K9H A;  1ULK A;  1FAR A;  1SGN I;  2NU0 I;  1SGE I;  3QTL D;  4GI3 C;  1K7V A;  1LR9 A;  2CWG A;  3E59 A;  1W4R A;  3OVO A;  1TBO A;  1K7T A;  1XBT A;  1ULM A;  2PQ8 A;  2E73 A;  1BUS A;  1KMA A;  2LB7 A;  1P9G A;  2QQE A;  2FNF X;  3UEJ A;  3MEK A;  1TOT A;  2WGC A;  3UGL A;  1H0Z A;  1MJ9 A;  2QQ0 A;  1PTQ A;  2LUY A;  3KY9 A;  1IW4 A;  1AN1 I;  2ORW A;  5DAE A;  2B0U C;  3HH2 C;  3R5D A;  3UOE A;  2QQC A;  2SGE I;  2UVO A;  1Q9B A;  3OXF A;  3VE5 A;  1CE3 A;  1UVF A;  3OL0 A;  3OXL A;  2KMR A;  1PPF I;  1FY7 A;  2ROW A;  4MPI A;  5HI7 A;  3UEY A;  2JW6 A;  1CT0 I;  2SGF I;  2M5X A;  2RC4 A;  2UZ3 A;  3TOA A;  3CXL A;  1UVG A;  1XX6 A;  1KBE A;  2KMQ A;  2Y0M A;  1SGR I;  1OYV I;  2J9R A;  2ODD A;  1CGI I;  4E1R A;  2DB6 A;  2GKV A;  1TBR R;  2JXD A;  2P6A C;  1U5K A;  1V1I A;  2W0T A;  5CCM A;  3BJI A;  2A20 A;  2DKV A;  1Y1C A;  1LR7 A;  2ARP F;  4FKD A;  5FUW A;  2WCY A;  1TUS A;  3TJQ A;  4L9M A;  1YU6 C;  2V53 A;  4UXH A;  5FUX A;  3R5C A;  1PJU A; 
#chains in the Genus database with same CATH homology
 2F3C I;  3GOX A;  3QWP A;  2YQP A;  4HGU A;  1BMO A;  3SEK C;  2ENZ A;  2B8T A;  2YUU A;  5EX0 A;  1FYB A;  3FC3 A;  2DIP A;  1DS2 I;  2SGD I;  3PDN A;  1MT1 A;  4UXI A;  1OMT A;  1OMU A;  1TIH A;  1YTP A;  2OD1 A;  1SGP I;  2NU2 I;  3SGB I;  1OVO A;  3UGD A;  2CJS C;  4B6D A;  3OXG A;  2GKT I;  1TBQ R;  2JYY A;  5JHW C;  2N1A B;  1PCE A;  2NU1 I;  1V1H A;  5EX3 A;  3UFF A;  1IY5 A;  1RFH A;  1M8B A;  2J87 A;  1VDD A;  3UGI A;  5HQ8 A;  2KCX A;  1KBF A;  1XA6 A;  2SGP I;  2V1C A;  4A24 A;  1CHO I;  4JCV E;  1M8C A;  1HDL A;  3RU0 A;  1CT2 I;  2KMO A;  2JZM A;  1CGJ I;  2NU4 I;  2L7X A;  2V1C C;  1X74 A;  2WVJ A;  1TGS I;  2OVO A;  3D00 A;  1W3S A;  3VDU A;  2QPO A;  5CCL A;  2JA1 A;  2N17 A;  2GVI A;  4UXJ A;  1TBN A;  2NU3 I;  2SGQ I;  5FUY A;  2BUS A;  5FUV A;  4E1P A;  2ORV A;  2LEO A;  1Y8F A;  4SGB I;  2QQD A;  1PTR A;  2GKR I;  1N13 A;  1X4S A;  1SGD I;  1SGY I;  3SGQ I;  1FAQ A;  3E2I A;  1NUB A;  1R79 A;  2KMP A;  3VDP A;  1CT4 I;  3B4V C;  1LR8 A;  2ERW A;  1R0R I;  2ENN A;  1UUC A;  1Z7K B;  2ELI A;  1HPT A;  1Y1B A;  1HJA I;  1CSO I;  2N52 A;  1DS3 I;  2L8E A;  2N71 A;  2VRW B;  4OVO A;  1IY6 A;  1SGQ I;  1TUR A;  2XRC A;  2E5R A;  2K9H A;  1FAR A;  1SGN I;  2NU0 I;  1SGE I;  3QTL D;  4GI3 C;  1LR9 A;  3E59 A;  3OVO A;  1W4R A;  1TBO A;  1XBT A;  1BUS A;  2E73 A;  1KMA A;  2QQE A;  2FNF X;  3UEJ A;  3MEK A;  1TOT A;  3UGL A;  1H0Z A;  2QQ0 A;  1PTQ A;  2LUY A;  3KY9 A;  1IW4 A;  1AN1 I;  2ORW A;  5DAE A;  2B0U C;  3HH2 C;  2QQC A;  2SGE I;  1CE3 A;  3OXF A;  3VE5 A;  1UVF A;  3OL0 A;  3OXL A;  2KMR A;  1PPF I;  2ROW A;  5HI7 A;  3UEY A;  2JW6 A;  1CT0 I;  2SGF I;  2M5X A;  2UZ3 A;  3CXL A;  1UVG A;  1XX6 A;  1KBE A;  2KMQ A;  1SGR I;  1OYV I;  2J9R A;  2ODD A;  1CGI I;  4E1R A;  2DB6 A;  2GKV A;  1TBR R;  2JXD A;  2P6A C;  1U5K A;  1V1I A;  2W0T A;  5CCM A;  3BJI A;  2A20 A;  1Y1C A;  1LR7 A;  2ARP F;  4FKD A;  5FUW A;  2WCY A;  1TUS A;  3TJQ A;  4L9M A;  1YU6 C;  2V53 A;  4UXH A;  5FUX A;  1PJU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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