1P9ZA

The solution structure of antifungal peptide distinct with a five-disulfide motif from eucommia ulmoides oliver
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
41
structure length
41
Chain Sequence
ETCASRCPRPCNAGLCCSIYGYCGSGAAYCGAGNCRCQCRG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antifungal protein
molecule keywords Eucommia Antifungal peptide 2
publication title Solution Structure of Eucommia Antifungal Peptide: A Novel Structural Model Distinct with a Five-Disulfide Motif.
pubmed doi rcsb
total genus 4
structure length 41
sequence length 41
ec nomenclature
pdb deposition date 2003-05-13
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 1p9zA00
1ULMA 4MPIA 1WGCA 2UVOA 1UHAA 4AMLA 7WGAA 1P9ZA 2DKVA 1K7TA 1Q9BA 2CWGA 1P9GA 1WKXA 4WP4A 1ULKA 2WGCA 2LB7A 9WGAA 1K7UA 1ULNA 1WGTA 1HEVA 2X3TA 2X52A 1K7VA
chains in the Genus database with same CATH superfamily
1ULMA 1LR9A 2QQ0A 3R5BA 3VDUA 1TGSI 1X4SA 3KY9A 4MPIA 1WGCA 2CJSC 1OYVI 1SGQI 3OL0A 4HGUA 2E73A 5E3RA 1TBOA 2ARPF 2UVOA 3FSXA 1MJ9A 2RIJA 4B6DA 2CWFA 2JA1A 2FNFX 2KMPA 1M8BA 2SGFI 5E3PA 2A20A 2J9RA 4L9MA 1UUCA 5HI7A 7WGAA 1NXUA 3R5CA 1RFHA 3UGDA 1DS2I 1K7TA 1TBRR 2QQDA 1LR8A 2CWGA 1P9GA 3TOBA 2SGDI 2KMOA 4E1RA 4UXJA 5CCLA 3UOEA 3VDPA 1TBNA 2LB7A 1X74A 2NU1I 1M8CA 2N17A 3HH2C 2ODDA 1WGTA 2ELIA 1IY5A 2ORWA 1SGRI 2K9HA 2LEOA 1CT4I 1U5KA 3UFFA 2LUYA 1K7VA 1XX6A 2L8EA 5E3QA 3SGBI 2GVIA 2NU3I 1Z2IA 3QWPA 2M5XA 3TO7A 1N13A 2SGEI 1HPTA 1OMTA 5HQ8A 3D00A 2GKVA 2B0UC 1VDDA 2ENNA 1FY7A 1TIHA 2GKTI 3E59A 1S20A 2V53A 3TO9A 2OVOA 3FC3A 1TBQR 1CGII 1FARA 3RU0A 2N52A 4DNCA 3SGQI 2N71A 3E2IA 1W4RA 1XA6A 2DKVA 3TJQA 2GKRI 4A24A 2JYYA 2V1CA 1Y1BA 3B4VC 2CWHA 1Y8FA 4UXIA 2ERWA 2QPOA 1MT1A 1W3SA 2KMRA 9WGAA 1K7UA 1KMAA 2KMQA 1TURA 2E5RA 2X3TA 1HEVA 2XRCA 2ROWA 5FUYA 3UGLA 1UVFA 3TO6A 1PTQA 3PDNA 1WTJA 1SGNI 2ENZA 2BUSA 1CGJI 1IW4A 2WCYA 1YU6C 2NU4I 4FKDA 1CE3A 5J8CA 1SGDI 4OVOA 1CHOI 2N1AB 2P6AC 1TUSA 1XBTA 1KBEA 1OMUA 2L7XA 5JHWC 5EX0A 4JCVE 1R79A 2Y0MA 2JW6A 1P9ZA 3TOAA 1IY6A 1SGPI 1CSOI 2JZMA 2OD1A 1HJAI 2YUUA 3BJIA 1Q9BA 1CT2I 2B8TA 1DS3I 2GIVA 2NU0I 3SEKC 2SGPI 4WP4A 2WGCA 1PCEA 3OVOA 5FUWA 1HDLA 2JXDA 1FAQA 2W0TA 2DB6A 3R5AA 1LR7A 2OU2A 4UXHA 1SGEI 3QAHA 1UVGA 2PQ8A 2V1CC 1SGYI 1Y1CA 2DIPA 5CCMA 1KBFA 1AN1I 2X52A 1PTRA 4GI3C 3R5DA 5FUXA 3VE5A 1NUBA 3MEKA 1TOTA 3UEYA 1V1IA 1Z7KB 1CT0I 5J8FA 1FYBA 2J87A 1R0RI 2UZ3A 1UHAA 1PJUA 3GOXA 4E1PA 1PPFI 4SGBI 2WVJA 2VRWB 2YQPA 1MJAA 5DAEA 5FUVA 2SGQI 4AMLA 1BUSA 2RC4A 2NU2I 1MJBA 1WKXA 1ULKA 2ORVA 3FSYA 5EX3A 2OZUA 3QTLD 3OXLA 1YTPA 3OXFA 3UEJA 3UGIA 3OXGA 1ULNA 2KCXA 1OVOA 2F3CI 2QQCA 1H0ZA 1BMOA 3CXLA 1V1HA 2QQEA
chains in the Genus database with same CATH topology
1ULMA 4MPIA 1WGCA 2UVOA 1UHAA 4AMLA 7WGAA 1P9ZA 2DKVA 1K7TA 1Q9BA 2CWGA 1P9GA 1WKXA 4WP4A 1ULKA 2WGCA 2LB7A 9WGAA 1K7UA 1ULNA 1WGTA 1HEVA 2X3TA 2X52A 1K7VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ULM A;  4MPI A;  1WGC A;  2UVO A;  1UHA A;  4AML A;  7WGA A;  1P9Z A;  2DKV A;  1K7T A;  1Q9B A;  2CWG A;  1P9G A;  1WKX A;  4WP4 A;  1ULK A;  2WGC A;  2LB7 A;  9WGA A;  1K7U A;  1ULN A;  1WGT A;  1HEV A;  2X3T A;  2X52 A;  1K7V A; 
#chains in the Genus database with same CATH topology
 1ULM A;  1LR9 A;  2QQ0 A;  3R5B A;  3VDU A;  1TGS I;  1X4S A;  3KY9 A;  4MPI A;  1WGC A;  2CJS C;  1OYV I;  1SGQ I;  3OL0 A;  4HGU A;  2E73 A;  5E3R A;  1TBO A;  2ARP F;  2UVO A;  3FSX A;  1MJ9 A;  2RIJ A;  4B6D A;  2CWF A;  2JA1 A;  2FNF X;  2KMP A;  1M8B A;  2SGF I;  5E3P A;  2A20 A;  2J9R A;  4L9M A;  1UUC A;  5HI7 A;  7WGA A;  1NXU A;  3R5C A;  1RFH A;  3UGD A;  1DS2 I;  1K7T A;  1TBR R;  2QQD A;  1LR8 A;  2CWG A;  1P9G A;  3TOB A;  2SGD I;  2KMO A;  4E1R A;  4UXJ A;  5CCL A;  3UOE A;  3VDP A;  1TBN A;  2LB7 A;  1X74 A;  2NU1 I;  1M8C A;  2N17 A;  3HH2 C;  2ODD A;  1WGT A;  2ELI A;  1IY5 A;  2ORW A;  1SGR I;  2K9H A;  2LEO A;  1CT4 I;  1U5K A;  3UFF A;  2LUY A;  1K7V A;  1XX6 A;  2L8E A;  5E3Q A;  3SGB I;  2GVI A;  2NU3 I;  1Z2I A;  3QWP A;  2M5X A;  3TO7 A;  1N13 A;  2SGE I;  1HPT A;  1OMT A;  5HQ8 A;  3D00 A;  2GKV A;  2B0U C;  1VDD A;  2ENN A;  1FY7 A;  1TIH A;  2GKT I;  3E59 A;  1S20 A;  2V53 A;  3TO9 A;  2OVO A;  3FC3 A;  1TBQ R;  1CGI I;  1FAR A;  3RU0 A;  2N52 A;  4DNC A;  3SGQ I;  2N71 A;  3E2I A;  1W4R A;  1XA6 A;  2DKV A;  3TJQ A;  2GKR I;  4A24 A;  2JYY A;  2V1C A;  1Y1B A;  3B4V C;  2CWH A;  1Y8F A;  4UXI A;  2ERW A;  2QPO A;  1MT1 A;  1W3S A;  2KMR A;  9WGA A;  1K7U A;  1KMA A;  2KMQ A;  1TUR A;  2E5R A;  2X3T A;  1HEV A;  2XRC A;  2ROW A;  5FUY A;  3UGL A;  1UVF A;  3TO6 A;  1PTQ A;  3PDN A;  1WTJ A;  1SGN I;  2ENZ A;  2BUS A;  1CGJ I;  1IW4 A;  2WCY A;  1YU6 C;  2NU4 I;  4FKD A;  1CE3 A;  5J8C A;  1SGD I;  4OVO A;  1CHO I;  2N1A B;  2P6A C;  1TUS A;  1XBT A;  1KBE A;  1OMU A;  2L7X A;  5JHW C;  5EX0 A;  4JCV E;  1R79 A;  2Y0M A;  2JW6 A;  1P9Z A;  3TOA A;  1IY6 A;  1SGP I;  1CSO I;  2JZM A;  2OD1 A;  1HJA I;  2YUU A;  3BJI A;  1Q9B A;  1CT2 I;  2B8T A;  1DS3 I;  2GIV A;  2NU0 I;  3SEK C;  2SGP I;  4WP4 A;  2WGC A;  1PCE A;  3OVO A;  5FUW A;  1HDL A;  2JXD A;  1FAQ A;  2W0T A;  2DB6 A;  3R5A A;  1LR7 A;  2OU2 A;  4UXH A;  1SGE I;  3QAH A;  1UVG A;  2PQ8 A;  2V1C C;  1SGY I;  1Y1C A;  2DIP A;  5CCM A;  1KBF A;  1AN1 I;  2X52 A;  1PTR A;  4GI3 C;  3R5D A;  5FUX A;  3VE5 A;  1NUB A;  3MEK A;  1TOT A;  3UEY A;  1V1I A;  1Z7K B;  1CT0 I;  5J8F A;  1FYB A;  2J87 A;  1R0R I;  2UZ3 A;  1UHA A;  1PJU A;  3GOX A;  4E1P A;  1PPF I;  4SGB I;  2WVJ A;  2VRW B;  2YQP A;  1MJA A;  5DAE A;  5FUV A;  2SGQ I;  4AML A;  1BUS A;  2RC4 A;  2NU2 I;  1MJB A;  1WKX A;  1ULK A;  2ORV A;  3FSY A;  5EX3 A;  2OZU A;  3QTL D;  3OXL A;  1YTP A;  3OXF A;  3UEJ A;  3UGI A;  3OXG A;  1ULN A;  2KCX A;  1OVO A;  2F3C I;  2QQC A;  1H0Z A;  1BMO A;  3CXL A;  1V1H A;  2QQE A; 
#chains in the Genus database with same CATH homology
 1ULM A;  4MPI A;  1WGC A;  2UVO A;  1UHA A;  4AML A;  7WGA A;  1P9Z A;  2DKV A;  1K7T A;  1Q9B A;  2CWG A;  1P9G A;  1WKX A;  4WP4 A;  1ULK A;  2WGC A;  2LB7 A;  9WGA A;  1K7U A;  1ULN A;  1WGT A;  1HEV A;  2X3T A;  2X52 A;  1K7V A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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