1P9ZA

The solution structure of antifungal peptide distinct with a five-disulfide motif from eucommia ulmoides oliver
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
41
structure length
41
Chain Sequence
ETCASRCPRPCNAGLCCSIYGYCGSGAAYCGAGNCRCQCRG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antifungal protein
molecule keywords Eucommia Antifungal peptide 2
publication title Solution Structure of Eucommia Antifungal Peptide: A Novel Structural Model Distinct with a Five-Disulfide Motif.
pubmed doi rcsb
total genus 4
structure length 41
sequence length 41
ec nomenclature
pdb deposition date 2003-05-13
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 1p9zA00
1P9GA 1K7VA 1P9ZA 9WGAA 2UVOA 2CWGA 4AMLA 1WGCA 4MPIA 2WGCA 1K7UA 1K7TA 1Q9BA 1ULNA 7WGAA 2X3TA 1WGTA 2DKVA 1UHAA 1WKXA 4WP4A 2LB7A 1ULKA 2X52A 1HEVA 1ULMA
chains in the Genus database with same CATH superfamily
1KMAA 2QPOA 1UVGA 3R5DA 2GKVA 2SGPI 2UVOA 1LR9A 2V1CC 1FY7A 2QQCA 2NU1I 2YUUA 1IY5A 4AMLA 1FAQA 1TBQR 1V1IA 3OXLA 1MJAA 1R79A 1NUBA 1SGDI 2WGCA 3OXFA 3OXGA 4HGUA 4MPIA 2ARPF 3TO7A 1ULNA 1WTJA 2B8TA 2SGDI 2YQPA 3OVOA 5CCLA 2E73A 3TOBA 3UEJA 2JYYA 1OMTA 1SGEI 2JXDA 2CWFA 2WCYA 3KY9A 2ENNA 2QQDA 4E1RA 3FSYA 1HPTA 1OVOA 2GIVA 2ORVA 2GKTI 1YU6C 5HI7A 1DS3I 5FUVA 2FNFX 1ULKA 1TBOA 2J87A 1PTQA 4L9MA 1NXUA 2N17A 1BMOA 1FARA 1CT4I 2KMQA 2RC4A 1CGJI 1OMUA 3E2IA 1CE3A 2M5XA 1P9ZA 2SGFI 2BUSA 3R5AA 1CSOI 4FKDA 1SGYI 1W3SA 2CWGA 1HDLA 2V1CA 2KCXA 4GI3C 4B6DA 1Q9BA 5EX0A 2PQ8A 2X3TA 2JW6A 2DKVA 2OD1A 1CT0I 1DS2I 1LR8A 1WKXA 1PPFI 5HQ8A 1U5KA 1OYVI 1Z7KB 5E3QA 1XX6A 2LEOA 2LB7A 3E59A 1X74A 2OU2A 2CWHA 5JHWC 1R0RI 1TBRR 2J9RA 5FUYA 2K9HA 3R5BA 3UGDA 1CT2I 2ENZA 2LUYA 3QAHA 1IW4A 3UFFA 1BUSA 1TURA 3SGQI 5FUXA 3UGLA 3GOXA 1P9GA 2F3CI 1K7VA 3TO9A 1PTRA 9WGAA 2NU0I 1Z2IA 5EX3A 1X4SA 3QWPA 1Y1BA 1MJ9A 1WGCA 4SGBI 1LR7A 3VDPA 2ORWA 2QQ0A 2DB6A 1PJUA 1W4RA 2OZUA 2V53A 2E5RA 1K7UA 1K7TA 1TOTA 3BJIA 3PDNA 7WGAA 2RIJA 1WGTA 5J8FA 1UHAA 4A24A 3VE5A 2L7XA 4WP4A 1N13A 1M8BA 2SGEI 1SGRI 1TUSA 2QQEA 1AN1I 2KMPA 1S20A 3D00A 3QTLD 1MT1A 1HJAI 1UVFA 1XA6A 3TOAA 3B4VC 1RFHA 3FC3A 2CJSC 1TGSI 1KBFA 1ULMA 2ELIA 2GVIA 3UEYA 3FSXA 1VDDA 2DIPA 1IY6A 2KMRA 3TO6A 1YTPA 1CGII 1CHOI 2WVJA 1TIHA 3SEKC 1SGNI 1TBNA 1M8CA 2P6AC 2W0TA 4JCVE 5J8CA 1XBTA 3VDUA 2OVOA 3RU0A 3UOEA 2ERWA 2NU4I 2UZ3A 1V1HA 2N71A 4UXJA 5E3RA 5CCMA 2ROWA 4DNCA 5FUWA 2A20A 1KBEA 5DAEA 2NU3I 1SGQI 2ODDA 1UUCA 2L8EA 2SGQI 2XRCA 4UXIA 1SGPI 3TJQA 3UGIA 3OL0A 2VRWB 4UXHA 3HH2C 5E3PA 2N52A 1PCEA 2NU2I 4E1PA 1Y8FA 2Y0MA 2JZMA 4OVOA 2GKRI 3R5CA 3CXLA 1FYBA 2X52A 3MEKA 1Y1CA 1H0ZA 2KMOA 1MJBA 2JA1A 1HEVA 3SGBI 2B0UC 2N1AB
chains in the Genus database with same CATH topology
1P9GA 1K7VA 1P9ZA 9WGAA 2UVOA 2CWGA 4AMLA 1WGCA 4MPIA 2WGCA 1K7UA 1K7TA 1Q9BA 1ULNA 7WGAA 2X3TA 1WGTA 2DKVA 1UHAA 1WKXA 4WP4A 2LB7A 1ULKA 2X52A 1HEVA 1ULMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P9G A;  1K7V A;  1P9Z A;  9WGA A;  2UVO A;  2CWG A;  4AML A;  1WGC A;  4MPI A;  2WGC A;  1K7U A;  1K7T A;  1Q9B A;  1ULN A;  7WGA A;  2X3T A;  1WGT A;  2DKV A;  1UHA A;  1WKX A;  4WP4 A;  2LB7 A;  1ULK A;  2X52 A;  1HEV A;  1ULM A; 
#chains in the Genus database with same CATH topology
 1KMA A;  2QPO A;  1UVG A;  3R5D A;  2GKV A;  2SGP I;  2UVO A;  1LR9 A;  2V1C C;  1FY7 A;  2QQC A;  2NU1 I;  2YUU A;  1IY5 A;  4AML A;  1FAQ A;  1TBQ R;  1V1I A;  3OXL A;  1MJA A;  1R79 A;  1NUB A;  1SGD I;  2WGC A;  3OXF A;  3OXG A;  4HGU A;  4MPI A;  2ARP F;  3TO7 A;  1ULN A;  1WTJ A;  2B8T A;  2SGD I;  2YQP A;  3OVO A;  5CCL A;  2E73 A;  3TOB A;  3UEJ A;  2JYY A;  1OMT A;  1SGE I;  2JXD A;  2CWF A;  2WCY A;  3KY9 A;  2ENN A;  2QQD A;  4E1R A;  3FSY A;  1HPT A;  1OVO A;  2GIV A;  2ORV A;  2GKT I;  1YU6 C;  5HI7 A;  1DS3 I;  5FUV A;  2FNF X;  1ULK A;  1TBO A;  2J87 A;  1PTQ A;  4L9M A;  1NXU A;  2N17 A;  1BMO A;  1FAR A;  1CT4 I;  2KMQ A;  2RC4 A;  1CGJ I;  1OMU A;  3E2I A;  1CE3 A;  2M5X A;  1P9Z A;  2SGF I;  2BUS A;  3R5A A;  1CSO I;  4FKD A;  1SGY I;  1W3S A;  2CWG A;  1HDL A;  2V1C A;  2KCX A;  4GI3 C;  4B6D A;  1Q9B A;  5EX0 A;  2PQ8 A;  2X3T A;  2JW6 A;  2DKV A;  2OD1 A;  1CT0 I;  1DS2 I;  1LR8 A;  1WKX A;  1PPF I;  5HQ8 A;  1U5K A;  1OYV I;  1Z7K B;  5E3Q A;  1XX6 A;  2LEO A;  2LB7 A;  3E59 A;  1X74 A;  2OU2 A;  2CWH A;  5JHW C;  1R0R I;  1TBR R;  2J9R A;  5FUY A;  2K9H A;  3R5B A;  3UGD A;  1CT2 I;  2ENZ A;  2LUY A;  3QAH A;  1IW4 A;  3UFF A;  1BUS A;  1TUR A;  3SGQ I;  5FUX A;  3UGL A;  3GOX A;  1P9G A;  2F3C I;  1K7V A;  3TO9 A;  1PTR A;  9WGA A;  2NU0 I;  1Z2I A;  5EX3 A;  1X4S A;  3QWP A;  1Y1B A;  1MJ9 A;  1WGC A;  4SGB I;  1LR7 A;  3VDP A;  2ORW A;  2QQ0 A;  2DB6 A;  1PJU A;  1W4R A;  2OZU A;  2V53 A;  2E5R A;  1K7U A;  1K7T A;  1TOT A;  3BJI A;  3PDN A;  7WGA A;  2RIJ A;  1WGT A;  5J8F A;  1UHA A;  4A24 A;  3VE5 A;  2L7X A;  4WP4 A;  1N13 A;  1M8B A;  2SGE I;  1SGR I;  1TUS A;  2QQE A;  1AN1 I;  2KMP A;  1S20 A;  3D00 A;  3QTL D;  1MT1 A;  1HJA I;  1UVF A;  1XA6 A;  3TOA A;  3B4V C;  1RFH A;  3FC3 A;  2CJS C;  1TGS I;  1KBF A;  1ULM A;  2ELI A;  2GVI A;  3UEY A;  3FSX A;  1VDD A;  2DIP A;  1IY6 A;  2KMR A;  3TO6 A;  1YTP A;  1CGI I;  1CHO I;  2WVJ A;  1TIH A;  3SEK C;  1SGN I;  1TBN A;  1M8C A;  2P6A C;  2W0T A;  4JCV E;  5J8C A;  1XBT A;  3VDU A;  2OVO A;  3RU0 A;  3UOE A;  2ERW A;  2NU4 I;  2UZ3 A;  1V1H A;  2N71 A;  4UXJ A;  5E3R A;  5CCM A;  2ROW A;  4DNC A;  5FUW A;  2A20 A;  1KBE A;  5DAE A;  2NU3 I;  1SGQ I;  2ODD A;  1UUC A;  2L8E A;  2SGQ I;  2XRC A;  4UXI A;  1SGP I;  3TJQ A;  3UGI A;  3OL0 A;  2VRW B;  4UXH A;  3HH2 C;  5E3P A;  2N52 A;  1PCE A;  2NU2 I;  4E1P A;  1Y8F A;  2Y0M A;  2JZM A;  4OVO A;  2GKR I;  3R5C A;  3CXL A;  1FYB A;  2X52 A;  3MEK A;  1Y1C A;  1H0Z A;  2KMO A;  1MJB A;  2JA1 A;  1HEV A;  3SGB I;  2B0U C;  2N1A B; 
#chains in the Genus database with same CATH homology
 1P9G A;  1K7V A;  1P9Z A;  9WGA A;  2UVO A;  2CWG A;  4AML A;  1WGC A;  4MPI A;  2WGC A;  1K7U A;  1K7T A;  1Q9B A;  1ULN A;  7WGA A;  2X3T A;  1WGT A;  2DKV A;  1UHA A;  1WKX A;  4WP4 A;  2LB7 A;  1ULK A;  2X52 A;  1HEV A;  1ULM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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