2E5RA

Solution structure of the zz domain of dystrobrevin alpha (dystrobrevin-alpha)
Total Genus 5
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
63
structure length
63
Chain Sequence
GSSGSSGVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSW
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Dna binding protein
molecule keywords Dystrobrevin alpha
publication title Solution structure of the ZZ domain of Dystrobrevin alpha (Dystrobrevin-alpha)
rcsb
source organism Homo sapiens
total genus 5
structure length 63
sequence length 63
ec nomenclature
pdb deposition date 2006-12-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00569 ZZ Zinc finger, ZZ type
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.90 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2e5rA00
1TOTA 2N1AB 2DIPA 2E5RA
chains in the Genus database with same CATH superfamily
1PCEA 3UEYA 2WGCA 4E1RA 9WGAA 2RC4A 2QQ0A 2X52A 3OXGA 1ULMA 1TBOA 3VDUA 1CT4I 3VDPA 2LB7A 2QQDA 5FUWA 2X3TA 1V1IA 4SGBI 5E3QA 1K7UA 3OXFA 2CWFA 3UFFA 2E5RA 2GKVA 2DKVA 1Y8FA 4UXHA 1KMAA 1X74A 2JXDA 2N17A 3E59A 1TBQR 1VDDA 1SGYI 2DIPA 2KCXA 1Q9BA 2XRCA 1XX6A 3B4VC 3R5BA 3SGBI 2PQ8A 1P9ZA 1WGCA 1PTRA 1WTJA 1MJ9A 1SGPI 1MJBA 1RFHA 2E73A 2Y0MA 1SGEI 5EX3A 3TOBA 3TOAA 5J8CA 3FC3A 1FAQA 1YTPA 1Z2IA 4L9MA 2WVJA 2OVOA 1CGII 1DS2I 2B8TA 1XA6A 3PDNA 3D00A 2SGPI 2KMPA 1UVFA 1CGJI 2CWHA 2OU2A 4OVOA 1V1HA 3UGLA 2ENNA 1TURA 2FNFX 2NU3I 2CJSC 1WKXA 3R5DA 3BJIA 2SGEI 2M5XA 4HGUA 2JA1A 1DS3I 3UEJA 1CT0I 1SGDI 2KMQA 2J87A 1YU6C 2GIVA 2ORWA 3FSXA 3SGQI 2OZUA 3QWPA 2GKTI 5DAEA 1K7VA 1LR7A 1M8BA 1OVOA 1M8CA 2N1AB 2P6AC 3E2IA 1FYBA 4JCVE 2NU2I 2V1CA 1KBFA 2QQCA 1UHAA 1TIHA 2N71A 1K7TA 1U5KA 3R5AA 1W4RA 3R5CA 1PPFI 3QTLD 4GI3C 1TGSI 2SGDI 3UGIA 1OMTA 5JHWC 1FY7A 1X4SA 2B0UC 1HJAI 3TO6A 2BUSA 1Y1BA 1BMOA 3QAHA 2RIJA 2NU0I 2JW6A 3SEKC 1LR9A 2DB6A 3UGDA 2UZ3A 1HPTA 1KBEA 5EX0A 3TO9A 1CE3A 1CSOI 1P9GA 1TBNA 2GKRI 2J9RA 3OVOA 1PTQA 4DNCA 4FKDA 4E1PA 1HEVA 2N52A 4UXJA 1WGTA 7WGAA 3UOEA 2GVIA 2NU4I 3RU0A 1SGNI 4AMLA 2K9HA 2QQEA 1UUCA 1NXUA 2ROWA 2V53A 1FARA 2SGFI 1PJUA 1UVGA 2ARPF 5FUXA 1H0ZA 1TOTA 1CHOI 2SGQI 2WCYA 1R79A 1R0RI 2ENZA 1IW4A 1CT2I 1Z7KB 1HDLA 2L8EA 1W3SA 2QPOA 1TBRR 3TJQA 1NUBA 2LUYA 2ORVA 1MJAA 2YUUA 5HI7A 1AN1I 1S20A 2A20A 3HH2C 3TO7A 1IY6A 1IY5A 2LEOA 5HQ8A 1SGQI 2NU1I 2F3CI 3MEKA 5CCMA 3GOXA 2ELIA 2JYYA 2CWGA 2OD1A 5J8FA 1TUSA 1ULNA 4B6DA 4UXIA 5CCLA 1LR8A 3OXLA 1SGRI 1BUSA 2KMOA 2YQPA 5E3RA 2UVOA 3FSYA 5FUYA 3OL0A 2JZMA 4MPIA 1Y1CA 3CXLA 3VE5A 1ULKA 2L7XA 3KY9A 1MT1A 1OMUA 2V1CC 4WP4A 5FUVA 4A24A 2ODDA 2VRWB 5E3PA 2KMRA 1N13A 1XBTA 1OYVI 2ERWA 2W0TA
chains in the Genus database with same CATH topology
1PCEA 3UEYA 4E1RA 2QQ0A 3OXGA 1TBOA 3VDUA 1CT4I 3VDPA 5FUWA 2QQDA 1V1IA 4SGBI 3OXFA 3UFFA 2E5RA 2GKVA 1Y8FA 4UXHA 1KMAA 1X74A 2JXDA 2N17A 3E59A 1TBQR 1VDDA 1SGYI 2DIPA 2KCXA 2XRCA 3B4VC 1XX6A 3SGBI 1PTRA 2E73A 1SGPI 5HQ8A 1RFHA 3FC3A 1SGEI 5EX3A 1FAQA 1YTPA 4L9MA 2WVJA 2OVOA 1CGII 2B8TA 1DS2I 1XA6A 3PDNA 3D00A 2SGPI 2KMPA 1UVFA 1CGJI 4OVOA 3UGLA 1V1HA 2ENNA 1TURA 2FNFX 2NU3I 2CJSC 3BJIA 2SGEI 2M5XA 4HGUA 2JA1A 1DS3I 3UEJA 1CT0I 1SGDI 2KMQA 2J87A 1YU6C 2ORWA 3SGQI 3QWPA 2GKTI 5DAEA 1M8BA 1LR7A 2N1AB 1OVOA 1M8CA 2P6AC 3E2IA 1FYBA 4JCVE 2NU2I 2V1CA 1KBFA 2QQCA 1TIHA 2N71A 1U5KA 1W4RA 1PPFI 3QTLD 4GI3C 1TGSI 2SGDI 3UGIA 1OMTA 5JHWC 2B0UC 1X4SA 1HJAI 2BUSA 1Y1BA 1BMOA 3SEKC 2NU0I 2JW6A 1LR9A 2DB6A 3UGDA 2UZ3A 1HPTA 1KBEA 5EX0A 1CE3A 1CSOI 1TBNA 2GKRI 2J9RA 3OVOA 4E1PA 1PTQA 4FKDA 2N52A 4UXJA 2GVIA 2NU4I 3RU0A 1SGNI 2K9HA 2QQEA 1UUCA 2ROWA 2V53A 1FARA 2SGFI 1PJUA 1UVGA 2ARPF 5FUXA 1H0ZA 1TOTA 1CHOI 2SGQI 2WCYA 1R79A 1R0RI 2ENZA 1IW4A 1CT2I 1Z7KB 1HDLA 2L8EA 1W3SA 2QPOA 1TBRR 3TJQA 1NUBA 2LUYA 2ORVA 2YUUA 5HI7A 1AN1I 2A20A 3HH2C 1IY6A 1IY5A 2LEOA 1SGQI 2NU1I 2F3CI 3MEKA 5CCMA 3GOXA 2ELIA 2JYYA 2OD1A 1TUSA 4B6DA 4UXIA 5CCLA 1LR8A 3OXLA 1SGRI 1BUSA 2KMOA 2YQPA 5FUYA 3OL0A 2JZMA 1Y1CA 3CXLA 3VE5A 2L7XA 3KY9A 1MT1A 1OMUA 2V1CC 5FUVA 4A24A 2ODDA 2VRWB 2KMRA 1N13A 1XBTA 1OYVI 2ERWA 2W0TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TOT A;  2N1A B;  2DIP A;  2E5R A; 
#chains in the Genus database with same CATH topology
 1PCE A;  3UEY A;  2WGC A;  4E1R A;  9WGA A;  2RC4 A;  2QQ0 A;  2X52 A;  3OXG A;  1ULM A;  1TBO A;  3VDU A;  1CT4 I;  3VDP A;  2LB7 A;  2QQD A;  5FUW A;  2X3T A;  1V1I A;  4SGB I;  5E3Q A;  1K7U A;  3OXF A;  2CWF A;  3UFF A;  2E5R A;  2GKV A;  2DKV A;  1Y8F A;  4UXH A;  1KMA A;  1X74 A;  2JXD A;  2N17 A;  3E59 A;  1TBQ R;  1VDD A;  1SGY I;  2DIP A;  2KCX A;  1Q9B A;  2XRC A;  1XX6 A;  3B4V C;  3R5B A;  3SGB I;  2PQ8 A;  1P9Z A;  1WGC A;  1PTR A;  1WTJ A;  1MJ9 A;  1SGP I;  1MJB A;  1RFH A;  2E73 A;  2Y0M A;  1SGE I;  5EX3 A;  3TOB A;  3TOA A;  5J8C A;  3FC3 A;  1FAQ A;  1YTP A;  1Z2I A;  4L9M A;  2WVJ A;  2OVO A;  1CGI I;  1DS2 I;  2B8T A;  1XA6 A;  3PDN A;  3D00 A;  2SGP I;  2KMP A;  1UVF A;  1CGJ I;  2CWH A;  2OU2 A;  4OVO A;  1V1H A;  3UGL A;  2ENN A;  1TUR A;  2FNF X;  2NU3 I;  2CJS C;  1WKX A;  3R5D A;  3BJI A;  2SGE I;  2M5X A;  4HGU A;  2JA1 A;  1DS3 I;  3UEJ A;  1CT0 I;  1SGD I;  2KMQ A;  2J87 A;  1YU6 C;  2GIV A;  2ORW A;  3FSX A;  3SGQ I;  2OZU A;  3QWP A;  2GKT I;  5DAE A;  1K7V A;  1LR7 A;  1M8B A;  1OVO A;  1M8C A;  2N1A B;  2P6A C;  3E2I A;  1FYB A;  4JCV E;  2NU2 I;  2V1C A;  1KBF A;  2QQC A;  1UHA A;  1TIH A;  2N71 A;  1K7T A;  1U5K A;  3R5A A;  1W4R A;  3R5C A;  1PPF I;  3QTL D;  4GI3 C;  1TGS I;  2SGD I;  3UGI A;  1OMT A;  5JHW C;  1FY7 A;  1X4S A;  2B0U C;  1HJA I;  3TO6 A;  2BUS A;  1Y1B A;  1BMO A;  3QAH A;  2RIJ A;  2NU0 I;  2JW6 A;  3SEK C;  1LR9 A;  2DB6 A;  3UGD A;  2UZ3 A;  1HPT A;  1KBE A;  5EX0 A;  3TO9 A;  1CE3 A;  1CSO I;  1P9G A;  1TBN A;  2GKR I;  2J9R A;  3OVO A;  1PTQ A;  4DNC A;  4FKD A;  4E1P A;  1HEV A;  2N52 A;  4UXJ A;  1WGT A;  7WGA A;  3UOE A;  2GVI A;  2NU4 I;  3RU0 A;  1SGN I;  4AML A;  2K9H A;  2QQE A;  1UUC A;  1NXU A;  2ROW A;  2V53 A;  1FAR A;  2SGF I;  1PJU A;  1UVG A;  2ARP F;  5FUX A;  1H0Z A;  1TOT A;  1CHO I;  2SGQ I;  2WCY A;  1R79 A;  1R0R I;  2ENZ A;  1IW4 A;  1CT2 I;  1Z7K B;  1HDL A;  2L8E A;  1W3S A;  2QPO A;  1TBR R;  3TJQ A;  1NUB A;  2LUY A;  2ORV A;  1MJA A;  2YUU A;  5HI7 A;  1AN1 I;  1S20 A;  2A20 A;  3HH2 C;  3TO7 A;  1IY6 A;  1IY5 A;  2LEO A;  5HQ8 A;  1SGQ I;  2NU1 I;  2F3C I;  3MEK A;  5CCM A;  3GOX A;  2ELI A;  2JYY A;  2CWG A;  2OD1 A;  5J8F A;  1TUS A;  1ULN A;  4B6D A;  4UXI A;  5CCL A;  1LR8 A;  3OXL A;  1SGR I;  1BUS A;  2KMO A;  2YQP A;  5E3R A;  2UVO A;  3FSY A;  5FUY A;  3OL0 A;  2JZM A;  4MPI A;  1Y1C A;  3CXL A;  3VE5 A;  1ULK A;  2L7X A;  3KY9 A;  1MT1 A;  1OMU A;  2V1C C;  4WP4 A;  5FUV A;  4A24 A;  2ODD A;  2VRW B;  5E3P A;  2KMR A;  1N13 A;  1XBT A;  1OYV I;  2ERW A;  2W0T A; 
#chains in the Genus database with same CATH homology
 1PCE A;  3UEY A;  4E1R A;  2QQ0 A;  3OXG A;  1TBO A;  3VDU A;  1CT4 I;  3VDP A;  5FUW A;  2QQD A;  1V1I A;  4SGB I;  3OXF A;  3UFF A;  2E5R A;  2GKV A;  1Y8F A;  4UXH A;  1KMA A;  1X74 A;  2JXD A;  2N17 A;  3E59 A;  1TBQ R;  1VDD A;  1SGY I;  2DIP A;  2KCX A;  2XRC A;  3B4V C;  1XX6 A;  3SGB I;  1PTR A;  2E73 A;  1SGP I;  5HQ8 A;  1RFH A;  3FC3 A;  1SGE I;  5EX3 A;  1FAQ A;  1YTP A;  4L9M A;  2WVJ A;  2OVO A;  1CGI I;  2B8T A;  1DS2 I;  1XA6 A;  3PDN A;  3D00 A;  2SGP I;  2KMP A;  1UVF A;  1CGJ I;  4OVO A;  3UGL A;  1V1H A;  2ENN A;  1TUR A;  2FNF X;  2NU3 I;  2CJS C;  3BJI A;  2SGE I;  2M5X A;  4HGU A;  2JA1 A;  1DS3 I;  3UEJ A;  1CT0 I;  1SGD I;  2KMQ A;  2J87 A;  1YU6 C;  2ORW A;  3SGQ I;  3QWP A;  2GKT I;  5DAE A;  1M8B A;  1LR7 A;  2N1A B;  1OVO A;  1M8C A;  2P6A C;  3E2I A;  1FYB A;  4JCV E;  2NU2 I;  2V1C A;  1KBF A;  2QQC A;  1TIH A;  2N71 A;  1U5K A;  1W4R A;  1PPF I;  3QTL D;  4GI3 C;  1TGS I;  2SGD I;  3UGI A;  1OMT A;  5JHW C;  2B0U C;  1X4S A;  1HJA I;  2BUS A;  1Y1B A;  1BMO A;  3SEK C;  2NU0 I;  2JW6 A;  1LR9 A;  2DB6 A;  3UGD A;  2UZ3 A;  1HPT A;  1KBE A;  5EX0 A;  1CE3 A;  1CSO I;  1TBN A;  2GKR I;  2J9R A;  3OVO A;  4E1P A;  1PTQ A;  4FKD A;  2N52 A;  4UXJ A;  2GVI A;  2NU4 I;  3RU0 A;  1SGN I;  2K9H A;  2QQE A;  1UUC A;  2ROW A;  2V53 A;  1FAR A;  2SGF I;  1PJU A;  1UVG A;  2ARP F;  5FUX A;  1H0Z A;  1TOT A;  1CHO I;  2SGQ I;  2WCY A;  1R79 A;  1R0R I;  2ENZ A;  1IW4 A;  1CT2 I;  1Z7K B;  1HDL A;  2L8E A;  1W3S A;  2QPO A;  1TBR R;  3TJQ A;  1NUB A;  2LUY A;  2ORV A;  2YUU A;  5HI7 A;  1AN1 I;  2A20 A;  3HH2 C;  1IY6 A;  1IY5 A;  2LEO A;  1SGQ I;  2NU1 I;  2F3C I;  3MEK A;  5CCM A;  3GOX A;  2ELI A;  2JYY A;  2OD1 A;  1TUS A;  4B6D A;  4UXI A;  5CCL A;  1LR8 A;  3OXL A;  1SGR I;  1BUS A;  2KMO A;  2YQP A;  5FUY A;  3OL0 A;  2JZM A;  1Y1C A;  3CXL A;  3VE5 A;  2L7X A;  3KY9 A;  1MT1 A;  1OMU A;  2V1C C;  5FUV A;  4A24 A;  2ODD A;  2VRW B;  2KMR A;  1N13 A;  1XBT A;  1OYV I;  2ERW A;  2W0T A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...