1TURA

Solution structure of turkey ovomucoid third domain as determined from nuclear magnetic resonance data
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords OVOMUCOID
publication title Solution structure of turkey ovomucoid third domain as determined from nuclear magnetic resonance data.
pubmed doi rcsb
source organism Meleagris gallopavo
molecule tags Serine proteinase inhibitor
total genus 9
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1994-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1turA00
3OVOA 2NU4I 1CHOI 4OVOA 1TBQR 1HDLA 2N17A 1Z7KB 1NUBA 1PCEA 1TUSA 1MT1A 1LR9A 2F3CI 1SGEI 1PPFI 2SGPI 1CGII 1FYBA 1PJUA 4GI3C 2V53A 2KMQA 1YTPA 1LR8A 1R0RI 2JZMA 1Y1CA 1TBRR 3B4VC 1SGRI 3TJQA 1OYVI 2KMPA 1OMUA 1SGPI 1CSOI 1CT4I 2OVOA 3SGBI 3SGQI 5JHWC 1HPTA 2NU3I 1CGJI 2LEOA 1SGYI 1TURA 1LR7A 2KMRA 2ERWA 1UVGA 1BMOA 2N52A 2SGDI 5DAEA 2SGFI 1KMAA 1N13A 3QTLD 1CT2I 1IW4A 2B0UC 2GKRI 2BUSA 1M8CA 2WCYA 2P6AC 1H0ZA 1TGSI 1UVFA 2QQCA 2ARPF 1BUSA 2M5XA 1DS3I 2KCXA 3SEKC 1M8BA 1AN1I 1SGDI 2KMOA 1CE3A 1HJAI 2NU1I 1IY6A 2JYYA 1IY5A 1Y1BA 4HGUA 1OMTA 1DS2I 2GKTI 1OVOA 2SGEI 2SGQI 1SGQI 2GKVA 1UUCA 2JXDA 3HH2C 2N71A 4SGBI 2NU2I 2QQDA 1YU6C 1SGNI 1CT0I 1TIHA 2XRCA 2NU0I
chains in the Genus database with same CATH superfamily
3VDUA 5HQ8A 2X3TA 3OVOA 2NU4I 2ENZA 1WKXA 1CHOI 2N1AB 7WGAA 3OXLA 3E59A 2DKVA 4OVOA 1TBQR 3FSXA 2ODDA 1HDLA 2J9RA 2N17A 1Z7KB 2WGCA 3UOEA 5EX3A 1NUBA 1PCEA 1TUSA 1VDDA 1MT1A 1LR9A 3UGIA 2F3CI 1SGEI 1PPFI 2FNFX 3E2IA 2SGPI 3TO7A 1CGII 1FYBA 1PJUA 3UEJA 4GI3C 2V53A 2Y0MA 2CWGA 2ORWA 1K7UA 2KMQA 1YTPA 2K9HA 1WGCA 2OD1A 4JCVE 1LR8A 3FSYA 3TO9A 4L9MA 5HI7A 1K7VA 1R0RI 1Y1CA 2JZMA 2W0TA 3PDNA 5FUWA 2QQEA 5J8CA 1TBRR 2VRWB 1SGRI 3B4VC 3UGDA 3TJQA 1OYVI 1Z2IA 2QPOA 2KMPA 1OMUA 5FUXA 1SGPI 3R5DA 1CSOI 1RFHA 1CT4I 3OL0A 5E3QA 2V1CA 2OVOA 3SGBI 3BJIA 2YQPA 3SGQI 1NXUA 2V1CC 1MJBA 5JHWC 1HPTA 2NU3I 1P9ZA 1CGJI 1Q9BA 3FC3A 1P9GA 2L8EA 3CXLA 2LEOA 1V1HA 1SGYI 1TURA 4DNCA 1LR7A 2A20A 2JW6A 3MEKA 4E1PA 4UXIA 2KMRA 1TOTA 1MJAA 2ERWA 1UVGA 1KBEA 1TBNA 1BMOA 2N52A 2XRCA 2X52A 3KY9A 3R5CA 4MPIA 1XX6A 2SGDI 5DAEA 4UXHA 3D00A 2SGFI 1KMAA 2E5RA 1N13A 2ORVA 4UXJA 3QTLD 1CT2I 2CWFA 2B0UC 5CCMA 2GKRI 3QAHA 1IW4A 1R79A 2BUSA 2UZ3A 1M8CA 2WVJA 4E1RA 2WCYA 4WP4A 2P6AC 5EX0A 1K7TA 1TGSI 1UVFA 2CJSC 2QQCA 1H0ZA 2ARPF 3R5BA 1FARA 1BUSA 5J8FA 1ULMA 2M5XA 1DS3I 1W4RA 2KCXA 2LB7A 2OZUA 3SEKC 2DIPA 1W3SA 2ELIA 1M8BA 1U5KA 3TOAA 1KBFA 1AN1I 1SGDI 1S20A 2RIJA 2UVOA 2KMOA 1CE3A 1V1IA 3UFFA 1XBTA 1FAQA 5E3PA 2RC4A 3R5AA 1HEVA 1HJAI 2NU1I 3UEYA 1IY6A 1X4SA 2JYYA 3UGLA 1IY5A 3OXFA 1WGTA 1UHAA 2LUYA 1FY7A 1Y1BA 5E3RA 1PTRA 1TBOA 5FUVA 4HGUA 1OMTA 1ULNA 5CCLA 1DS2I 2GKTI 1OVOA 2L7XA 2CWHA 2GIVA 2QQ0A 2SGEI 1PTQA 1SGQI 2E73A 2SGQI 2GKVA 4A24A 3RU0A 1UUCA 2ENNA 2GVIA 3VDPA 2JXDA 2JA1A 3HH2C 2J87A 2N71A 1MJ9A 4B6DA 9WGAA 3GOXA 1Y8FA 3TO6A 3VE5A 2PQ8A 2NU2I 4SGBI 2YUUA 1XA6A 2DB6A 3OXGA 5FUYA 2OU2A 2ROWA 3TOBA 2QQDA 4AMLA 1ULKA 1WTJA 4FKDA 1YU6C 1SGNI 1CT0I 3QWPA 1TIHA 2B8TA 2NU0I 1X74A
chains in the Genus database with same CATH topology
3VDUA 5HQ8A 3OVOA 2NU4I 2ENZA 1CHOI 2N1AB 3OXLA 3E59A 4OVOA 1TBQR 2ODDA 1HDLA 2J9RA 2N17A 1Z7KB 5EX3A 1NUBA 1PCEA 1TUSA 1VDDA 1MT1A 1LR9A 3UGIA 2F3CI 1SGEI 1PPFI 2FNFX 3E2IA 2SGPI 1CGII 1FYBA 1PJUA 3UEJA 4GI3C 2V53A 2ORWA 2KMQA 1YTPA 2K9HA 2OD1A 4JCVE 1LR8A 4L9MA 5HI7A 1R0RI 2JZMA 1Y1CA 5FUWA 2W0TA 3PDNA 2QQEA 1TBRR 2VRWB 1SGRI 3B4VC 3UGDA 3TJQA 1OYVI 2QPOA 2KMPA 1OMUA 5FUXA 1SGPI 4A24A 1CSOI 1RFHA 1CT4I 3OL0A 2V1CA 2OVOA 3SGBI 3BJIA 2YQPA 3SGQI 2V1CC 5JHWC 1HPTA 2NU3I 1CGJI 3FC3A 2L8EA 3CXLA 2LEOA 1V1HA 1SGYI 1TURA 1LR7A 2A20A 2JW6A 3MEKA 4E1PA 4UXIA 2KMRA 1TOTA 2ERWA 1UVGA 1KBEA 1TBNA 1BMOA 2N52A 2XRCA 3KY9A 1XX6A 2SGDI 5DAEA 4UXHA 3D00A 2SGFI 1KMAA 2E5RA 1N13A 2ORVA 4UXJA 3QTLD 1CT2I 5CCMA 2B0UC 1IW4A 2GKRI 1R79A 2BUSA 2UZ3A 1M8CA 2WVJA 4E1RA 2WCYA 2P6AC 5EX0A 1TGSI 1UVFA 2QQCA 2CJSC 1H0ZA 2ARPF 1FARA 1BUSA 2M5XA 1DS3I 1W4RA 2KCXA 3SEKC 2DIPA 1W3SA 2ELIA 1M8BA 1U5KA 1KBFA 1AN1I 1SGDI 2KMOA 1CE3A 1V1IA 3UFFA 1XBTA 1FAQA 1HJAI 2NU1I 3UEYA 1IY6A 1X4SA 2JYYA 3UGLA 1IY5A 3OXFA 2LUYA 1Y1BA 1PTRA 1TBOA 5FUVA 4HGUA 1OMTA 5CCLA 1DS2I 2GKTI 1OVOA 2L7XA 2QQ0A 2SGEI 1PTQA 1SGQI 2E73A 2SGQI 2GKVA 3RU0A 1UUCA 2ENNA 2GVIA 3VDPA 2JXDA 2JA1A 3HH2C 2J87A 2N71A 4B6DA 3GOXA 1Y8FA 3VE5A 4SGBI 2NU2I 2YUUA 1XA6A 2DB6A 3OXGA 5FUYA 2ROWA 2QQDA 4FKDA 1YU6C 1SGNI 1CT0I 3QWPA 1TIHA 2B8TA 2NU0I 1X74A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OVO A;  2NU4 I;  1CHO I;  4OVO A;  1TBQ R;  1HDL A;  2N17 A;  1Z7K B;  1NUB A;  1PCE A;  1TUS A;  1MT1 A;  1LR9 A;  2F3C I;  1SGE I;  1PPF I;  2SGP I;  1CGI I;  1FYB A;  1PJU A;  4GI3 C;  2V53 A;  2KMQ A;  1YTP A;  1LR8 A;  1R0R I;  2JZM A;  1Y1C A;  1TBR R;  3B4V C;  1SGR I;  3TJQ A;  1OYV I;  2KMP A;  1OMU A;  1SGP I;  1CSO I;  1CT4 I;  2OVO A;  3SGB I;  3SGQ I;  5JHW C;  1HPT A;  2NU3 I;  1CGJ I;  2LEO A;  1SGY I;  1TUR A;  1LR7 A;  2KMR A;  2ERW A;  1UVG A;  1BMO A;  2N52 A;  2SGD I;  5DAE A;  2SGF I;  1KMA A;  1N13 A;  3QTL D;  1CT2 I;  1IW4 A;  2B0U C;  2GKR I;  2BUS A;  1M8C A;  2WCY A;  2P6A C;  1H0Z A;  1TGS I;  1UVF A;  2QQC A;  2ARP F;  1BUS A;  2M5X A;  1DS3 I;  2KCX A;  3SEK C;  1M8B A;  1AN1 I;  1SGD I;  2KMO A;  1CE3 A;  1HJA I;  2NU1 I;  1IY6 A;  2JYY A;  1IY5 A;  1Y1B A;  4HGU A;  1OMT A;  1DS2 I;  2GKT I;  1OVO A;  2SGE I;  2SGQ I;  1SGQ I;  2GKV A;  1UUC A;  2JXD A;  3HH2 C;  2N71 A;  4SGB I;  2NU2 I;  2QQD A;  1YU6 C;  1SGN I;  1CT0 I;  1TIH A;  2XRC A;  2NU0 I; 
#chains in the Genus database with same CATH topology
 3VDU A;  5HQ8 A;  2X3T A;  3OVO A;  2NU4 I;  2ENZ A;  1WKX A;  1CHO I;  2N1A B;  7WGA A;  3OXL A;  3E59 A;  2DKV A;  4OVO A;  1TBQ R;  3FSX A;  2ODD A;  1HDL A;  2J9R A;  2N17 A;  1Z7K B;  2WGC A;  3UOE A;  5EX3 A;  1NUB A;  1PCE A;  1TUS A;  1VDD A;  1MT1 A;  1LR9 A;  3UGI A;  2F3C I;  1SGE I;  1PPF I;  2FNF X;  3E2I A;  2SGP I;  3TO7 A;  1CGI I;  1FYB A;  1PJU A;  3UEJ A;  4GI3 C;  2V53 A;  2Y0M A;  2CWG A;  2ORW A;  1K7U A;  2KMQ A;  1YTP A;  2K9H A;  1WGC A;  2OD1 A;  4JCV E;  1LR8 A;  3FSY A;  3TO9 A;  4L9M A;  5HI7 A;  1K7V A;  1R0R I;  1Y1C A;  2JZM A;  2W0T A;  3PDN A;  5FUW A;  2QQE A;  5J8C A;  1TBR R;  2VRW B;  1SGR I;  3B4V C;  3UGD A;  3TJQ A;  1OYV I;  1Z2I A;  2QPO A;  2KMP A;  1OMU A;  5FUX A;  1SGP I;  3R5D A;  1CSO I;  1RFH A;  1CT4 I;  3OL0 A;  5E3Q A;  2V1C A;  2OVO A;  3SGB I;  3BJI A;  2YQP A;  3SGQ I;  1NXU A;  2V1C C;  1MJB A;  5JHW C;  1HPT A;  2NU3 I;  1P9Z A;  1CGJ I;  1Q9B A;  3FC3 A;  1P9G A;  2L8E A;  3CXL A;  2LEO A;  1V1H A;  1SGY I;  1TUR A;  4DNC A;  1LR7 A;  2A20 A;  2JW6 A;  3MEK A;  4E1P A;  4UXI A;  2KMR A;  1TOT A;  1MJA A;  2ERW A;  1UVG A;  1KBE A;  1TBN A;  1BMO A;  2N52 A;  2XRC A;  2X52 A;  3KY9 A;  3R5C A;  4MPI A;  1XX6 A;  2SGD I;  5DAE A;  4UXH A;  3D00 A;  2SGF I;  1KMA A;  2E5R A;  1N13 A;  2ORV A;  4UXJ A;  3QTL D;  1CT2 I;  2CWF A;  2B0U C;  5CCM A;  2GKR I;  3QAH A;  1IW4 A;  1R79 A;  2BUS A;  2UZ3 A;  1M8C A;  2WVJ A;  4E1R A;  2WCY A;  4WP4 A;  2P6A C;  5EX0 A;  1K7T A;  1TGS I;  1UVF A;  2CJS C;  2QQC A;  1H0Z A;  2ARP F;  3R5B A;  1FAR A;  1BUS A;  5J8F A;  1ULM A;  2M5X A;  1DS3 I;  1W4R A;  2KCX A;  2LB7 A;  2OZU A;  3SEK C;  2DIP A;  1W3S A;  2ELI A;  1M8B A;  1U5K A;  3TOA A;  1KBF A;  1AN1 I;  1SGD I;  1S20 A;  2RIJ A;  2UVO A;  2KMO A;  1CE3 A;  1V1I A;  3UFF A;  1XBT A;  1FAQ A;  5E3P A;  2RC4 A;  3R5A A;  1HEV A;  1HJA I;  2NU1 I;  3UEY A;  1IY6 A;  1X4S A;  2JYY A;  3UGL A;  1IY5 A;  3OXF A;  1WGT A;  1UHA A;  2LUY A;  1FY7 A;  1Y1B A;  5E3R A;  1PTR A;  1TBO A;  5FUV A;  4HGU A;  1OMT A;  1ULN A;  5CCL A;  1DS2 I;  2GKT I;  1OVO A;  2L7X A;  2CWH A;  2GIV A;  2QQ0 A;  2SGE I;  1PTQ A;  1SGQ I;  2E73 A;  2SGQ I;  2GKV A;  4A24 A;  3RU0 A;  1UUC A;  2ENN A;  2GVI A;  3VDP A;  2JXD A;  2JA1 A;  3HH2 C;  2J87 A;  2N71 A;  1MJ9 A;  4B6D A;  9WGA A;  3GOX A;  1Y8F A;  3TO6 A;  3VE5 A;  2PQ8 A;  2NU2 I;  4SGB I;  2YUU A;  1XA6 A;  2DB6 A;  3OXG A;  5FUY A;  2OU2 A;  2ROW A;  3TOB A;  2QQD A;  4AML A;  1ULK A;  1WTJ A;  4FKD A;  1YU6 C;  1SGN I;  1CT0 I;  3QWP A;  1TIH A;  2B8T A;  2NU0 I;  1X74 A; 
#chains in the Genus database with same CATH homology
 3VDU A;  5HQ8 A;  3OVO A;  2NU4 I;  2ENZ A;  1CHO I;  2N1A B;  3OXL A;  3E59 A;  4OVO A;  1TBQ R;  2ODD A;  1HDL A;  2J9R A;  2N17 A;  1Z7K B;  5EX3 A;  1NUB A;  1PCE A;  1TUS A;  1VDD A;  1MT1 A;  1LR9 A;  3UGI A;  2F3C I;  1SGE I;  1PPF I;  2FNF X;  3E2I A;  2SGP I;  1CGI I;  1FYB A;  1PJU A;  3UEJ A;  4GI3 C;  2V53 A;  2ORW A;  2KMQ A;  1YTP A;  2K9H A;  2OD1 A;  4JCV E;  1LR8 A;  4L9M A;  5HI7 A;  1R0R I;  2JZM A;  1Y1C A;  5FUW A;  2W0T A;  3PDN A;  2QQE A;  1TBR R;  2VRW B;  1SGR I;  3B4V C;  3UGD A;  3TJQ A;  1OYV I;  2QPO A;  2KMP A;  1OMU A;  5FUX A;  1SGP I;  4A24 A;  1CSO I;  1RFH A;  1CT4 I;  3OL0 A;  2V1C A;  2OVO A;  3SGB I;  3BJI A;  2YQP A;  3SGQ I;  2V1C C;  5JHW C;  1HPT A;  2NU3 I;  1CGJ I;  3FC3 A;  2L8E A;  3CXL A;  2LEO A;  1V1H A;  1SGY I;  1TUR A;  1LR7 A;  2A20 A;  2JW6 A;  3MEK A;  4E1P A;  4UXI A;  2KMR A;  1TOT A;  2ERW A;  1UVG A;  1KBE A;  1TBN A;  1BMO A;  2N52 A;  2XRC A;  3KY9 A;  1XX6 A;  2SGD I;  5DAE A;  4UXH A;  3D00 A;  2SGF I;  1KMA A;  2E5R A;  1N13 A;  2ORV A;  4UXJ A;  3QTL D;  1CT2 I;  5CCM A;  2B0U C;  1IW4 A;  2GKR I;  1R79 A;  2BUS A;  2UZ3 A;  1M8C A;  2WVJ A;  4E1R A;  2WCY A;  2P6A C;  5EX0 A;  1TGS I;  1UVF A;  2QQC A;  2CJS C;  1H0Z A;  2ARP F;  1FAR A;  1BUS A;  2M5X A;  1DS3 I;  1W4R A;  2KCX A;  3SEK C;  2DIP A;  1W3S A;  2ELI A;  1M8B A;  1U5K A;  1KBF A;  1AN1 I;  1SGD I;  2KMO A;  1CE3 A;  1V1I A;  3UFF A;  1XBT A;  1FAQ A;  1HJA I;  2NU1 I;  3UEY A;  1IY6 A;  1X4S A;  2JYY A;  3UGL A;  1IY5 A;  3OXF A;  2LUY A;  1Y1B A;  1PTR A;  1TBO A;  5FUV A;  4HGU A;  1OMT A;  5CCL A;  1DS2 I;  2GKT I;  1OVO A;  2L7X A;  2QQ0 A;  2SGE I;  1PTQ A;  1SGQ I;  2E73 A;  2SGQ I;  2GKV A;  3RU0 A;  1UUC A;  2ENN A;  2GVI A;  3VDP A;  2JXD A;  2JA1 A;  3HH2 C;  2J87 A;  2N71 A;  4B6D A;  3GOX A;  1Y8F A;  3VE5 A;  4SGB I;  2NU2 I;  2YUU A;  1XA6 A;  2DB6 A;  3OXG A;  5FUY A;  2ROW A;  2QQD A;  4FKD A;  1YU6 C;  1SGN I;  1CT0 I;  3QWP A;  1TIH A;  2B8T A;  2NU0 I;  1X74 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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