1TURA

Solution structure of turkey ovomucoid third domain as determined from nuclear magnetic resonance data
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords OVOMUCOID
publication title Solution structure of turkey ovomucoid third domain as determined from nuclear magnetic resonance data.
pubmed doi rcsb
source organism Meleagris gallopavo
molecule tags Serine proteinase inhibitor
total genus 9
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1994-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1turA00
2GKRI 1SGQI 5DAEA 2N52A 1TBRR 1PCEA 1SGDI 2OVOA 2BUSA 1MT1A 1CT2I 4HGUA 1LR8A 1SGRI 1YU6C 1UVFA 2QQDA 2KCXA 4OVOA 1M8CA 1PPFI 2F3CI 1IW4A 1CT0I 3HH2C 1DS3I 1SGEI 1SGNI 1OMUA 1UVGA 1HJAI 2JXDA 2QQCA 3QTLD 2ARPF 2SGFI 1CT4I 1FYBA 1LR7A 1TIHA 1TUSA 2SGQI 2WCYA 1Y1BA 1CE3A 3OVOA 1DS2I 1H0ZA 1PJUA 2N17A 2XRCA 1SGPI 1Y1CA 1HDLA 2M5XA 2GKVA 2GKTI 2JZMA 1IY6A 2SGDI 1UUCA 2KMPA 1OVOA 1KMAA 1OYVI 1TGSI 2ERWA 1YTPA 2P6AC 2B0UC 1CGJI 2JYYA 1SGYI 2N71A 3SGQI 1CGII 1BUSA 2NU3I 1OMTA 3SGBI 2NU0I 2NU2I 1NUBA 3TJQA 2NU1I 5JHWC 2KMOA 2KMRA 4GI3C 1CSOI 1M8BA 1TURA 1LR9A 1BMOA 2SGPI 1R0RI 1CHOI 3B4VC 1IY5A 1Z7KB 1N13A 1HPTA 1TBQR 2KMQA 1AN1I 2NU4I 2LEOA 3SEKC 4SGBI 2SGEI 2V53A
chains in the Genus database with same CATH superfamily
2GKRI 1SGQI 2CJSC 2LUYA 5J8CA 3CXLA 5DAEA 2N52A 1TBRR 1PCEA 2RIJA 1SGDI 1TOTA 2OVOA 5FUYA 1PTRA 5HI7A 2GVIA 1MJ9A 1U5KA 2BUSA 9WGAA 1MT1A 1CT2I 2OU2A 2ORVA 2QQEA 4HGUA 3FSYA 1LR8A 1SGRI 4AMLA 3TO9A 4DNCA 1Y8FA 1XBTA 1YU6C 1P9ZA 5CCLA 3GOXA 1UVFA 1R79A 2DB6A 3R5BA 5FUWA 2V1CA 2GIVA 1W3SA 2QQDA 3FSXA 2KCXA 1ULMA 4OVOA 1M8CA 1FAQA 2J87A 1WGTA 1PPFI 1KBFA 1V1IA 2VRWB 1PTQA 4UXHA 2F3CI 5E3PA 1IW4A 1CT0I 1RFHA 2JW6A 2ORWA 3HH2C 1DS3I 1FARA 2V1CC 2W0TA 2Y0MA 1SGEI 1SGNI 1OMUA 1UVGA 1HJAI 2A20A 2JXDA 2ROWA 2QQCA 3QTLD 1VDDA 2OD1A 2ARPF 2SGFI 3BJIA 1CT4I 1MJBA 1XX6A 3D00A 1FYBA 2LB7A 4A24A 2WGCA 1LR7A 2B8TA 1TIHA 1WKXA 1WGCA 1Q9BA 1TUSA 2SGQI 4JCVE 1X74A 2WCYA 4UXJA 1ULNA 2ENNA 1Y1BA 1CE3A 3OVOA 1DS2I 4MPIA 1P9GA 2K9HA 1H0ZA 1PJUA 1MJAA 1Z2IA 2CWGA 2DIPA 2N17A 4B6DA 3UEYA 2XRCA 3R5CA 3VDPA 1SGPI 2RC4A 3UGIA 1Y1CA 2E5RA 1HDLA 2L7XA 2M5XA 2GKVA 2GKTI 3TO6A 1K7VA 2JZMA 2FNFX 2PQ8A 1UUCA 2SGDI 2KMPA 1IY6A 1OVOA 3UGDA 4E1RA 2QQ0A 2YUUA 1KMAA 1TBNA 1OYVI 1TGSI 2ERWA 3UFFA 2UZ3A 3PDNA 1YTPA 2P6AC 2B0UC 1CGJI 2JYYA 3UEJA 1SGYI 2CWFA 3E2IA 4WP4A 2N71A 1K7UA 3SGQI 5HQ8A 2ELIA 1CGII 1BUSA 4E1PA 5EX0A 2NU3I 1OMTA 1V1HA 3SGBI 2JA1A 3OL0A 2UVOA 2NU0I 3OXFA 3TOAA 1TBOA 5FUXA 2NU2I 2L8EA 1NUBA 2X52A 2NU1I 3TJQA 5JHWC 2X3TA 3MEKA 2KMOA 2KMRA 2CWHA 3QAHA 3R5DA 2YQPA 3TO7A 3TOBA 3VDUA 5EX3A 4L9MA 2DKVA 4GI3C 1CSOI 1M8BA 1ULKA 1TURA 1LR9A 1K7TA 1FY7A 2WVJA 2J9RA 4UXIA 1BMOA 1UHAA 2ODDA 2SGPI 1R0RI 3UGLA 3OXLA 5E3QA 3OXGA 3VE5A 3FC3A 1CHOI 1HEVA 3RU0A 2QPOA 3B4VC 3KY9A 1S20A 2E73A 1IY5A 3R5AA 1X4SA 3QWPA 3E59A 1Z7KB 1N13A 2OZUA 5E3RA 1HPTA 1XA6A 5CCMA 1TBQR 2KMQA 1AN1I 3UOEA 1W4RA 1WTJA 7WGAA 4FKDA 2ENZA 2NU4I 2LEOA 3SEKC 1NXUA 2SGEI 4SGBI 2N1AB 5FUVA 5J8FA 1KBEA 2V53A
chains in the Genus database with same CATH topology
2GKRI 1SGQI 2CJSC 2LUYA 3CXLA 5DAEA 2N52A 1TBRR 1PCEA 5FUYA 1SGDI 1TOTA 2OVOA 1PTRA 5HI7A 2GVIA 1U5KA 2BUSA 1MT1A 1CT2I 2ORVA 2QQEA 4HGUA 1LR8A 1SGRI 1Y8FA 1XBTA 1YU6C 3GOXA 5CCLA 1UVFA 1R79A 2DB6A 5FUWA 2V1CA 1W3SA 2QQDA 2KCXA 4OVOA 1M8CA 1FAQA 2J87A 1PPFI 1KBFA 1V1IA 2VRWB 1PTQA 4UXHA 2F3CI 1IW4A 1CT0I 1RFHA 2JW6A 2ORWA 3HH2C 1DS3I 1FARA 2V1CC 2W0TA 3UEJA 1SGEI 1SGNI 1OMUA 2A20A 1HJAI 1UVGA 2JXDA 2ROWA 2QQCA 3QTLD 1VDDA 2OD1A 2ARPF 2SGFI 3BJIA 1CT4I 1XX6A 3D00A 1FYBA 4A24A 1LR7A 2B8TA 1TIHA 1TUSA 2SGQI 4JCVE 1X74A 2WCYA 4UXJA 2ENNA 1Y1BA 1CE3A 3OVOA 1DS2I 1H0ZA 2K9HA 1PJUA 4B6DA 2N17A 2DIPA 3UEYA 2XRCA 3VDPA 1SGPI 3UGIA 1Y1CA 2E5RA 1HDLA 2L7XA 2M5XA 2GKVA 2GKTI 2JZMA 2FNFX 2SGDI 1UUCA 1IY6A 2KMPA 1OVOA 3UGDA 4E1RA 2QQ0A 2YUUA 1KMAA 1TBNA 1OYVI 1TGSI 2ERWA 3UFFA 2UZ3A 3PDNA 1YTPA 2P6AC 2B0UC 1CGJI 2JYYA 1SGYI 3E2IA 2N71A 3SGQI 5HQ8A 2ELIA 1CGII 1BUSA 4E1PA 5EX0A 2NU3I 1OMTA 1V1HA 3SGBI 2JA1A 3OL0A 2NU0I 3OXFA 1TBOA 5FUXA 2NU2I 2L8EA 1NUBA 3TJQA 2NU1I 5JHWC 3MEKA 2KMOA 2KMRA 3VDUA 2YQPA 5EX3A 4L9MA 4GI3C 1CSOI 1M8BA 1TURA 1LR9A 2WVJA 2J9RA 4UXIA 1BMOA 2ODDA 2SGPI 1R0RI 3UGLA 3OXLA 3VE5A 3OXGA 3FC3A 1CHOI 3RU0A 2QPOA 3B4VC 3KY9A 2E73A 1IY5A 1X4SA 3QWPA 3E59A 1Z7KB 1N13A 1HPTA 1XA6A 5CCMA 1TBQR 2KMQA 1AN1I 1W4RA 4FKDA 2ENZA 2NU4I 2LEOA 3SEKC 4SGBI 2SGEI 5FUVA 2N1AB 1KBEA 2V53A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GKR I;  1SGQ I;  5DAE A;  2N52 A;  1TBR R;  1PCE A;  1SGD I;  2OVO A;  2BUS A;  1MT1 A;  1CT2 I;  4HGU A;  1LR8 A;  1SGR I;  1YU6 C;  1UVF A;  2QQD A;  2KCX A;  4OVO A;  1M8C A;  1PPF I;  2F3C I;  1IW4 A;  1CT0 I;  3HH2 C;  1DS3 I;  1SGE I;  1SGN I;  1OMU A;  1UVG A;  1HJA I;  2JXD A;  2QQC A;  3QTL D;  2ARP F;  2SGF I;  1CT4 I;  1FYB A;  1LR7 A;  1TIH A;  1TUS A;  2SGQ I;  2WCY A;  1Y1B A;  1CE3 A;  3OVO A;  1DS2 I;  1H0Z A;  1PJU A;  2N17 A;  2XRC A;  1SGP I;  1Y1C A;  1HDL A;  2M5X A;  2GKV A;  2GKT I;  2JZM A;  1IY6 A;  2SGD I;  1UUC A;  2KMP A;  1OVO A;  1KMA A;  1OYV I;  1TGS I;  2ERW A;  1YTP A;  2P6A C;  2B0U C;  1CGJ I;  2JYY A;  1SGY I;  2N71 A;  3SGQ I;  1CGI I;  1BUS A;  2NU3 I;  1OMT A;  3SGB I;  2NU0 I;  2NU2 I;  1NUB A;  3TJQ A;  2NU1 I;  5JHW C;  2KMO A;  2KMR A;  4GI3 C;  1CSO I;  1M8B A;  1TUR A;  1LR9 A;  1BMO A;  2SGP I;  1R0R I;  1CHO I;  3B4V C;  1IY5 A;  1Z7K B;  1N13 A;  1HPT A;  1TBQ R;  2KMQ A;  1AN1 I;  2NU4 I;  2LEO A;  3SEK C;  4SGB I;  2SGE I;  2V53 A; 
#chains in the Genus database with same CATH topology
 2GKR I;  1SGQ I;  2CJS C;  2LUY A;  5J8C A;  3CXL A;  5DAE A;  2N52 A;  1TBR R;  1PCE A;  2RIJ A;  1SGD I;  1TOT A;  2OVO A;  5FUY A;  1PTR A;  5HI7 A;  2GVI A;  1MJ9 A;  1U5K A;  2BUS A;  9WGA A;  1MT1 A;  1CT2 I;  2OU2 A;  2ORV A;  2QQE A;  4HGU A;  3FSY A;  1LR8 A;  1SGR I;  4AML A;  3TO9 A;  4DNC A;  1Y8F A;  1XBT A;  1YU6 C;  1P9Z A;  5CCL A;  3GOX A;  1UVF A;  1R79 A;  2DB6 A;  3R5B A;  5FUW A;  2V1C A;  2GIV A;  1W3S A;  2QQD A;  3FSX A;  2KCX A;  1ULM A;  4OVO A;  1M8C A;  1FAQ A;  2J87 A;  1WGT A;  1PPF I;  1KBF A;  1V1I A;  2VRW B;  1PTQ A;  4UXH A;  2F3C I;  5E3P A;  1IW4 A;  1CT0 I;  1RFH A;  2JW6 A;  2ORW A;  3HH2 C;  1DS3 I;  1FAR A;  2V1C C;  2W0T A;  2Y0M A;  1SGE I;  1SGN I;  1OMU A;  1UVG A;  1HJA I;  2A20 A;  2JXD A;  2ROW A;  2QQC A;  3QTL D;  1VDD A;  2OD1 A;  2ARP F;  2SGF I;  3BJI A;  1CT4 I;  1MJB A;  1XX6 A;  3D00 A;  1FYB A;  2LB7 A;  4A24 A;  2WGC A;  1LR7 A;  2B8T A;  1TIH A;  1WKX A;  1WGC A;  1Q9B A;  1TUS A;  2SGQ I;  4JCV E;  1X74 A;  2WCY A;  4UXJ A;  1ULN A;  2ENN A;  1Y1B A;  1CE3 A;  3OVO A;  1DS2 I;  4MPI A;  1P9G A;  2K9H A;  1H0Z A;  1PJU A;  1MJA A;  1Z2I A;  2CWG A;  2DIP A;  2N17 A;  4B6D A;  3UEY A;  2XRC A;  3R5C A;  3VDP A;  1SGP I;  2RC4 A;  3UGI A;  1Y1C A;  2E5R A;  1HDL A;  2L7X A;  2M5X A;  2GKV A;  2GKT I;  3TO6 A;  1K7V A;  2JZM A;  2FNF X;  2PQ8 A;  1UUC A;  2SGD I;  2KMP A;  1IY6 A;  1OVO A;  3UGD A;  4E1R A;  2QQ0 A;  2YUU A;  1KMA A;  1TBN A;  1OYV I;  1TGS I;  2ERW A;  3UFF A;  2UZ3 A;  3PDN A;  1YTP A;  2P6A C;  2B0U C;  1CGJ I;  2JYY A;  3UEJ A;  1SGY I;  2CWF A;  3E2I A;  4WP4 A;  2N71 A;  1K7U A;  3SGQ I;  5HQ8 A;  2ELI A;  1CGI I;  1BUS A;  4E1P A;  5EX0 A;  2NU3 I;  1OMT A;  1V1H A;  3SGB I;  2JA1 A;  3OL0 A;  2UVO A;  2NU0 I;  3OXF A;  3TOA A;  1TBO A;  5FUX A;  2NU2 I;  2L8E A;  1NUB A;  2X52 A;  2NU1 I;  3TJQ A;  5JHW C;  2X3T A;  3MEK A;  2KMO A;  2KMR A;  2CWH A;  3QAH A;  3R5D A;  2YQP A;  3TO7 A;  3TOB A;  3VDU A;  5EX3 A;  4L9M A;  2DKV A;  4GI3 C;  1CSO I;  1M8B A;  1ULK A;  1TUR A;  1LR9 A;  1K7T A;  1FY7 A;  2WVJ A;  2J9R A;  4UXI A;  1BMO A;  1UHA A;  2ODD A;  2SGP I;  1R0R I;  3UGL A;  3OXL A;  5E3Q A;  3OXG A;  3VE5 A;  3FC3 A;  1CHO I;  1HEV A;  3RU0 A;  2QPO A;  3B4V C;  3KY9 A;  1S20 A;  2E73 A;  1IY5 A;  3R5A A;  1X4S A;  3QWP A;  3E59 A;  1Z7K B;  1N13 A;  2OZU A;  5E3R A;  1HPT A;  1XA6 A;  5CCM A;  1TBQ R;  2KMQ A;  1AN1 I;  3UOE A;  1W4R A;  1WTJ A;  7WGA A;  4FKD A;  2ENZ A;  2NU4 I;  2LEO A;  3SEK C;  1NXU A;  2SGE I;  4SGB I;  2N1A B;  5FUV A;  5J8F A;  1KBE A;  2V53 A; 
#chains in the Genus database with same CATH homology
 2GKR I;  1SGQ I;  2CJS C;  2LUY A;  3CXL A;  5DAE A;  2N52 A;  1TBR R;  1PCE A;  5FUY A;  1SGD I;  1TOT A;  2OVO A;  1PTR A;  5HI7 A;  2GVI A;  1U5K A;  2BUS A;  1MT1 A;  1CT2 I;  2ORV A;  2QQE A;  4HGU A;  1LR8 A;  1SGR I;  1Y8F A;  1XBT A;  1YU6 C;  3GOX A;  5CCL A;  1UVF A;  1R79 A;  2DB6 A;  5FUW A;  2V1C A;  1W3S A;  2QQD A;  2KCX A;  4OVO A;  1M8C A;  1FAQ A;  2J87 A;  1PPF I;  1KBF A;  1V1I A;  2VRW B;  1PTQ A;  4UXH A;  2F3C I;  1IW4 A;  1CT0 I;  1RFH A;  2JW6 A;  2ORW A;  3HH2 C;  1DS3 I;  1FAR A;  2V1C C;  2W0T A;  3UEJ A;  1SGE I;  1SGN I;  1OMU A;  2A20 A;  1HJA I;  1UVG A;  2JXD A;  2ROW A;  2QQC A;  3QTL D;  1VDD A;  2OD1 A;  2ARP F;  2SGF I;  3BJI A;  1CT4 I;  1XX6 A;  3D00 A;  1FYB A;  4A24 A;  1LR7 A;  2B8T A;  1TIH A;  1TUS A;  2SGQ I;  4JCV E;  1X74 A;  2WCY A;  4UXJ A;  2ENN A;  1Y1B A;  1CE3 A;  3OVO A;  1DS2 I;  1H0Z A;  2K9H A;  1PJU A;  4B6D A;  2N17 A;  2DIP A;  3UEY A;  2XRC A;  3VDP A;  1SGP I;  3UGI A;  1Y1C A;  2E5R A;  1HDL A;  2L7X A;  2M5X A;  2GKV A;  2GKT I;  2JZM A;  2FNF X;  2SGD I;  1UUC A;  1IY6 A;  2KMP A;  1OVO A;  3UGD A;  4E1R A;  2QQ0 A;  2YUU A;  1KMA A;  1TBN A;  1OYV I;  1TGS I;  2ERW A;  3UFF A;  2UZ3 A;  3PDN A;  1YTP A;  2P6A C;  2B0U C;  1CGJ I;  2JYY A;  1SGY I;  3E2I A;  2N71 A;  3SGQ I;  5HQ8 A;  2ELI A;  1CGI I;  1BUS A;  4E1P A;  5EX0 A;  2NU3 I;  1OMT A;  1V1H A;  3SGB I;  2JA1 A;  3OL0 A;  2NU0 I;  3OXF A;  1TBO A;  5FUX A;  2NU2 I;  2L8E A;  1NUB A;  3TJQ A;  2NU1 I;  5JHW C;  3MEK A;  2KMO A;  2KMR A;  3VDU A;  2YQP A;  5EX3 A;  4L9M A;  4GI3 C;  1CSO I;  1M8B A;  1TUR A;  1LR9 A;  2WVJ A;  2J9R A;  4UXI A;  1BMO A;  2ODD A;  2SGP I;  1R0R I;  3UGL A;  3OXL A;  3VE5 A;  3OXG A;  3FC3 A;  1CHO I;  3RU0 A;  2QPO A;  3B4V C;  3KY9 A;  2E73 A;  1IY5 A;  1X4S A;  3QWP A;  3E59 A;  1Z7K B;  1N13 A;  1HPT A;  1XA6 A;  5CCM A;  1TBQ R;  2KMQ A;  1AN1 I;  1W4R A;  4FKD A;  2ENZ A;  2NU4 I;  2LEO A;  3SEK C;  4SGB I;  2SGE I;  5FUV A;  2N1A B;  1KBE A;  2V53 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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