1TURA

Solution structure of turkey ovomucoid third domain as determined from nuclear magnetic resonance data
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Serine proteinase inhibitor
molecule keywords OVOMUCOID
publication title Solution structure of turkey ovomucoid third domain as determined from nuclear magnetic resonance data.
pubmed doi rcsb
source organism Meleagris gallopavo
total genus 9
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1994-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1turA00
2KCXA 1SGQI 2JXDA 2BUSA 1N13A 3OVOA 5JHWC 2B0UC 2QQCA 3QTLD 1CGII 1HPTA 1HJAI 2NU4I 1YU6C 1BUSA 1SGNI 1FYBA 1CT2I 1OMTA 2KMRA 2SGPI 1LR8A 2ARPF 1SGRI 1TGSI 1M8CA 4OVOA 3SGBI 2JYYA 1NUBA 1SGYI 2N71A 5DAEA 1Z7KB 1AN1I 1PPFI 1PCEA 2NU3I 2GKRI 1CT0I 2ERWA 1DS2I 1SGPI 1KMAA 2GKVA 1OYVI 1IW4A 2OVOA 2NU1I 3TJQA 2NU0I 2XRCA 1MT1A 1IY6A 2M5XA 2SGQI 3SGQI 2F3CI 1CE3A 2LEOA 2SGDI 1BMOA 1TBRR 1UUCA 1M8BA 2P6AC 1TURA 2QQDA 1OMUA 3B4VC 3HH2C 1R0RI 1CHOI 2KMPA 2KMQA 2GKTI 1PJUA 1YTPA 4HGUA 1IY5A 1HDLA 1DS3I 1SGDI 1UVFA 1TBQR 1UVGA 1Y1CA 2SGEI 1SGEI 1CSOI 1CT4I 1H0ZA 2N17A 1TUSA 1Y1BA 1LR9A 1LR7A 2SGFI 1TIHA 2JZMA 1OVOA 2NU2I 2KMOA 3SEKC 2V53A 2WCYA 2N52A 4GI3C 1CGJI 4SGBI
chains in the Genus database with same CATH superfamily
1MJ9A 2KCXA 1FAQA 1SGQI 3MEKA 2JXDA 2BUSA 2PQ8A 1N13A 3OXLA 1MJBA 3OVOA 3QWPA 3TO7A 2V1CC 3VDPA 5FUYA 5JHWC 4UXIA 2CWGA 1ULKA 1V1HA 2YUUA 2B0UC 2L8EA 2N1AB 2QQCA 1CGII 1PTQA 2UVOA 3QTLD 1XX6A 1KBEA 1HPTA 3UGIA 1HJAI 3TO9A 1P9ZA 2NU4I 2ORWA 2E73A 4WP4A 1YU6C 3E59A 2K9HA 4L9MA 3RU0A 3TO6A 1BUSA 3BJIA 1SGNI 1TOTA 3R5DA 5FUVA 3UGLA 1FYBA 1CT2I 2QPOA 5J8FA 2RIJA 2DIPA 3D00A 3R5BA 1OMTA 5HI7A 1TBNA 2KMRA 2SGPI 1K7TA 1LR8A 1WKXA 5CCMA 5FUWA 1RFHA 2UZ3A 2ARPF 4AMLA 1SGRI 1TGSI 1M8CA 4OVOA 1NXUA 1XA6A 2ELIA 3SGBI 2JYYA 2X3TA 1NUBA 1SGYI 1MJAA 2N71A 3OL0A 1TBOA 1W4RA 3PDNA 3UEJA 5DAEA 1Y8FA 1Z7KB 1AN1I 4A24A 1W3SA 1PPFI 1PCEA 2CWHA 2LB7A 1ULNA 2E5RA 2GKRI 2NU3I 1CT0I 2ERWA 4E1RA 4B6DA 1HEVA 1DS2I 1SGPI 2RC4A 2B8TA 1KMAA 3VE5A 2GKVA 1K7UA 5J8CA 3R5CA 3R5AA 4DNCA 1OYVI 3UEYA 1IW4A 2OVOA 2CJSC 7WGAA 3FC3A 2NU1I 2DKVA 3TJQA 2ENZA 2NU0I 2V1CA 1MT1A 2XRCA 1IY6A 2Y0MA 1K7VA 4UXHA 5E3QA 1WTJA 9WGAA 2M5XA 2SGQI 3SGQI 2F3CI 1X74A 1CE3A 2ENNA 2LEOA 2SGDI 1BMOA 1TBRR 2OZUA 2QQ0A 1UUCA 1M8BA 2P6AC 3FSXA 3TOAA 3VDUA 2J9RA 1TURA 2J87A 2YQPA 1UHAA 2ROWA 2QQDA 2A20A 1OMUA 3KY9A 2ORVA 1PTRA 2QQEA 3B4VC 1V1IA 1WGTA 1XBTA 1R0RI 3HH2C 2W0TA 3UFFA 3UOEA 5EX3A 5E3PA 2WGCA 5CCLA 1CHOI 1FARA 2KMPA 1Z2IA 2KMQA 3E2IA 2GKTI 4E1PA 3TOBA 3FSYA 2OD1A 5HQ8A 1PJUA 1YTPA 1X4SA 4HGUA 1IY5A 1HDLA 1DS3I 2L7XA 2FNFX 4FKDA 1KBFA 2WVJA 1SGDI 1UVFA 1TBQR 3GOXA 3OXGA 1UVGA 1U5KA 1Y1CA 2VRWB 3OXFA 2SGEI 2LUYA 1SGEI 2CWFA 4MPIA 1Q9BA 5E3RA 1CSOI 1CT4I 2GVIA 4JCVE 5FUXA 1H0ZA 2N17A 1TUSA 2JW6A 4UXJA 3QAHA 1R79A 1Y1BA 1LR9A 2JA1A 3UGDA 1LR7A 1WGCA 5EX0A 1ULMA 2X52A 2SGFI 1TIHA 2ODDA 2GIVA 2JZMA 1OVOA 2NU2I 1P9GA 1FY7A 2DB6A 2KMOA 3SEKC 2V53A 1S20A 2WCYA 2OU2A 1VDDA 2N52A 4GI3C 1CGJI 3CXLA 4SGBI
chains in the Genus database with same CATH topology
2KCXA 1FAQA 1SGQI 3MEKA 2JXDA 2BUSA 1N13A 3OXLA 3QWPA 3OVOA 3VDPA 2V1CC 5FUYA 5JHWC 4UXIA 1V1HA 2YUUA 2B0UC 2L8EA 2N1AB 2QQCA 1CGII 1PTQA 3QTLD 3UGIA 1XX6A 1KBEA 1HPTA 1HJAI 2NU4I 2ORWA 2E73A 1YU6C 3E59A 2K9HA 4L9MA 3RU0A 1BUSA 3BJIA 1SGNI 1TOTA 5FUVA 3UGLA 1FYBA 1CT2I 2QPOA 2DIPA 3D00A 1OMTA 5HI7A 1TBNA 2KMRA 2SGPI 1LR8A 5FUWA 1RFHA 2UZ3A 2ARPF 1SGRI 1TGSI 1M8CA 4OVOA 1XA6A 2ELIA 3SGBI 2JYYA 1NUBA 1SGYI 2N71A 3OL0A 3PDNA 1TBOA 1W4RA 3UEJA 5DAEA 1Y8FA 1Z7KB 1AN1I 4A24A 1W3SA 1PPFI 1PCEA 5CCMA 2NU3I 2E5RA 2GKRI 4E1RA 1CT0I 2ERWA 4B6DA 1DS2I 1SGPI 2B8TA 1KMAA 3VE5A 2GKVA 1OYVI 3UEYA 1IW4A 2OVOA 2CJSC 1CGJI 3FC3A 2NU1I 3TJQA 2ENZA 2NU0I 2V1CA 1MT1A 2XRCA 1IY6A 4UXHA 2M5XA 2SGQI 3SGQI 2F3CI 1CE3A 2ENNA 2LEOA 2SGDI 1BMOA 1TBRR 2QQ0A 1UUCA 1M8BA 2P6AC 3VDUA 2J9RA 1TURA 2J87A 2YQPA 2ROWA 2QQDA 2A20A 1OMUA 3KY9A 2ORVA 1PTRA 2QQEA 3B4VC 1V1IA 1XBTA 3HH2C 1R0RI 2W0TA 3UFFA 5EX3A 5CCLA 1CHOI 1FARA 2KMPA 2KMQA 3E2IA 4E1PA 2GKTI 2OD1A 5HQ8A 1PJUA 1YTPA 1X4SA 4HGUA 1IY5A 1HDLA 1DS3I 2L7XA 2FNFX 4FKDA 1KBFA 2WVJA 1SGDI 1UVFA 1TBQR 3GOXA 3OXGA 1UVGA 1U5KA 1Y1CA 2VRWB 3OXFA 2SGEI 2LUYA 1SGEI 1CSOI 1CT4I 2GVIA 4JCVE 5FUXA 1H0ZA 2N17A 1TUSA 2JW6A 4UXJA 1R79A 1Y1BA 1LR9A 2JA1A 3UGDA 1LR7A 5EX0A 2SGFI 1TIHA 2ODDA 2JZMA 1OVOA 2NU2I 2DB6A 2KMOA 3SEKC 2V53A 2WCYA 1VDDA 2N52A 4GI3C 1X74A 3CXLA 4SGBI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KCX A;  1SGQ I;  2JXD A;  2BUS A;  1N13 A;  3OVO A;  5JHW C;  2B0U C;  2QQC A;  3QTL D;  1CGI I;  1HPT A;  1HJA I;  2NU4 I;  1YU6 C;  1BUS A;  1SGN I;  1FYB A;  1CT2 I;  1OMT A;  2KMR A;  2SGP I;  1LR8 A;  2ARP F;  1SGR I;  1TGS I;  1M8C A;  4OVO A;  3SGB I;  2JYY A;  1NUB A;  1SGY I;  2N71 A;  5DAE A;  1Z7K B;  1AN1 I;  1PPF I;  1PCE A;  2NU3 I;  2GKR I;  1CT0 I;  2ERW A;  1DS2 I;  1SGP I;  1KMA A;  2GKV A;  1OYV I;  1IW4 A;  2OVO A;  2NU1 I;  3TJQ A;  2NU0 I;  2XRC A;  1MT1 A;  1IY6 A;  2M5X A;  2SGQ I;  3SGQ I;  2F3C I;  1CE3 A;  2LEO A;  2SGD I;  1BMO A;  1TBR R;  1UUC A;  1M8B A;  2P6A C;  1TUR A;  2QQD A;  1OMU A;  3B4V C;  3HH2 C;  1R0R I;  1CHO I;  2KMP A;  2KMQ A;  2GKT I;  1PJU A;  1YTP A;  4HGU A;  1IY5 A;  1HDL A;  1DS3 I;  1SGD I;  1UVF A;  1TBQ R;  1UVG A;  1Y1C A;  2SGE I;  1SGE I;  1CSO I;  1CT4 I;  1H0Z A;  2N17 A;  1TUS A;  1Y1B A;  1LR9 A;  1LR7 A;  2SGF I;  1TIH A;  2JZM A;  1OVO A;  2NU2 I;  2KMO A;  3SEK C;  2V53 A;  2WCY A;  2N52 A;  4GI3 C;  1CGJ I;  4SGB I; 
#chains in the Genus database with same CATH topology
 1MJ9 A;  2KCX A;  1FAQ A;  1SGQ I;  3MEK A;  2JXD A;  2BUS A;  2PQ8 A;  1N13 A;  3OXL A;  1MJB A;  3OVO A;  3QWP A;  3TO7 A;  2V1C C;  3VDP A;  5FUY A;  5JHW C;  4UXI A;  2CWG A;  1ULK A;  1V1H A;  2YUU A;  2B0U C;  2L8E A;  2N1A B;  2QQC A;  1CGI I;  1PTQ A;  2UVO A;  3QTL D;  1XX6 A;  1KBE A;  1HPT A;  3UGI A;  1HJA I;  3TO9 A;  1P9Z A;  2NU4 I;  2ORW A;  2E73 A;  4WP4 A;  1YU6 C;  3E59 A;  2K9H A;  4L9M A;  3RU0 A;  3TO6 A;  1BUS A;  3BJI A;  1SGN I;  1TOT A;  3R5D A;  5FUV A;  3UGL A;  1FYB A;  1CT2 I;  2QPO A;  5J8F A;  2RIJ A;  2DIP A;  3D00 A;  3R5B A;  1OMT A;  5HI7 A;  1TBN A;  2KMR A;  2SGP I;  1K7T A;  1LR8 A;  1WKX A;  5CCM A;  5FUW A;  1RFH A;  2UZ3 A;  2ARP F;  4AML A;  1SGR I;  1TGS I;  1M8C A;  4OVO A;  1NXU A;  1XA6 A;  2ELI A;  3SGB I;  2JYY A;  2X3T A;  1NUB A;  1SGY I;  1MJA A;  2N71 A;  3OL0 A;  1TBO A;  1W4R A;  3PDN A;  3UEJ A;  5DAE A;  1Y8F A;  1Z7K B;  1AN1 I;  4A24 A;  1W3S A;  1PPF I;  1PCE A;  2CWH A;  2LB7 A;  1ULN A;  2E5R A;  2GKR I;  2NU3 I;  1CT0 I;  2ERW A;  4E1R A;  4B6D A;  1HEV A;  1DS2 I;  1SGP I;  2RC4 A;  2B8T A;  1KMA A;  3VE5 A;  2GKV A;  1K7U A;  5J8C A;  3R5C A;  3R5A A;  4DNC A;  1OYV I;  3UEY A;  1IW4 A;  2OVO A;  2CJS C;  7WGA A;  3FC3 A;  2NU1 I;  2DKV A;  3TJQ A;  2ENZ A;  2NU0 I;  2V1C A;  1MT1 A;  2XRC A;  1IY6 A;  2Y0M A;  1K7V A;  4UXH A;  5E3Q A;  1WTJ A;  9WGA A;  2M5X A;  2SGQ I;  3SGQ I;  2F3C I;  1X74 A;  1CE3 A;  2ENN A;  2LEO A;  2SGD I;  1BMO A;  1TBR R;  2OZU A;  2QQ0 A;  1UUC A;  1M8B A;  2P6A C;  3FSX A;  3TOA A;  3VDU A;  2J9R A;  1TUR A;  2J87 A;  2YQP A;  1UHA A;  2ROW A;  2QQD A;  2A20 A;  1OMU A;  3KY9 A;  2ORV A;  1PTR A;  2QQE A;  3B4V C;  1V1I A;  1WGT A;  1XBT A;  1R0R I;  3HH2 C;  2W0T A;  3UFF A;  3UOE A;  5EX3 A;  5E3P A;  2WGC A;  5CCL A;  1CHO I;  1FAR A;  2KMP A;  1Z2I A;  2KMQ A;  3E2I A;  2GKT I;  4E1P A;  3TOB A;  3FSY A;  2OD1 A;  5HQ8 A;  1PJU A;  1YTP A;  1X4S A;  4HGU A;  1IY5 A;  1HDL A;  1DS3 I;  2L7X A;  2FNF X;  4FKD A;  1KBF A;  2WVJ A;  1SGD I;  1UVF A;  1TBQ R;  3GOX A;  3OXG A;  1UVG A;  1U5K A;  1Y1C A;  2VRW B;  3OXF A;  2SGE I;  2LUY A;  1SGE I;  2CWF A;  4MPI A;  1Q9B A;  5E3R A;  1CSO I;  1CT4 I;  2GVI A;  4JCV E;  5FUX A;  1H0Z A;  2N17 A;  1TUS A;  2JW6 A;  4UXJ A;  3QAH A;  1R79 A;  1Y1B A;  1LR9 A;  2JA1 A;  3UGD A;  1LR7 A;  1WGC A;  5EX0 A;  1ULM A;  2X52 A;  2SGF I;  1TIH A;  2ODD A;  2GIV A;  2JZM A;  1OVO A;  2NU2 I;  1P9G A;  1FY7 A;  2DB6 A;  2KMO A;  3SEK C;  2V53 A;  1S20 A;  2WCY A;  2OU2 A;  1VDD A;  2N52 A;  4GI3 C;  1CGJ I;  3CXL A;  4SGB I; 
#chains in the Genus database with same CATH homology
 2KCX A;  1FAQ A;  1SGQ I;  3MEK A;  2JXD A;  2BUS A;  1N13 A;  3OXL A;  3QWP A;  3OVO A;  3VDP A;  2V1C C;  5FUY A;  5JHW C;  4UXI A;  1V1H A;  2YUU A;  2B0U C;  2L8E A;  2N1A B;  2QQC A;  1CGI I;  1PTQ A;  3QTL D;  3UGI A;  1XX6 A;  1KBE A;  1HPT A;  1HJA I;  2NU4 I;  2ORW A;  2E73 A;  1YU6 C;  3E59 A;  2K9H A;  4L9M A;  3RU0 A;  1BUS A;  3BJI A;  1SGN I;  1TOT A;  5FUV A;  3UGL A;  1FYB A;  1CT2 I;  2QPO A;  2DIP A;  3D00 A;  1OMT A;  5HI7 A;  1TBN A;  2KMR A;  2SGP I;  1LR8 A;  5FUW A;  1RFH A;  2UZ3 A;  2ARP F;  1SGR I;  1TGS I;  1M8C A;  4OVO A;  1XA6 A;  2ELI A;  3SGB I;  2JYY A;  1NUB A;  1SGY I;  2N71 A;  3OL0 A;  3PDN A;  1TBO A;  1W4R A;  3UEJ A;  5DAE A;  1Y8F A;  1Z7K B;  1AN1 I;  4A24 A;  1W3S A;  1PPF I;  1PCE A;  5CCM A;  2NU3 I;  2E5R A;  2GKR I;  4E1R A;  1CT0 I;  2ERW A;  4B6D A;  1DS2 I;  1SGP I;  2B8T A;  1KMA A;  3VE5 A;  2GKV A;  1OYV I;  3UEY A;  1IW4 A;  2OVO A;  2CJS C;  1CGJ I;  3FC3 A;  2NU1 I;  3TJQ A;  2ENZ A;  2NU0 I;  2V1C A;  1MT1 A;  2XRC A;  1IY6 A;  4UXH A;  2M5X A;  2SGQ I;  3SGQ I;  2F3C I;  1CE3 A;  2ENN A;  2LEO A;  2SGD I;  1BMO A;  1TBR R;  2QQ0 A;  1UUC A;  1M8B A;  2P6A C;  3VDU A;  2J9R A;  1TUR A;  2J87 A;  2YQP A;  2ROW A;  2QQD A;  2A20 A;  1OMU A;  3KY9 A;  2ORV A;  1PTR A;  2QQE A;  3B4V C;  1V1I A;  1XBT A;  3HH2 C;  1R0R I;  2W0T A;  3UFF A;  5EX3 A;  5CCL A;  1CHO I;  1FAR A;  2KMP A;  2KMQ A;  3E2I A;  4E1P A;  2GKT I;  2OD1 A;  5HQ8 A;  1PJU A;  1YTP A;  1X4S A;  4HGU A;  1IY5 A;  1HDL A;  1DS3 I;  2L7X A;  2FNF X;  4FKD A;  1KBF A;  2WVJ A;  1SGD I;  1UVF A;  1TBQ R;  3GOX A;  3OXG A;  1UVG A;  1U5K A;  1Y1C A;  2VRW B;  3OXF A;  2SGE I;  2LUY A;  1SGE I;  1CSO I;  1CT4 I;  2GVI A;  4JCV E;  5FUX A;  1H0Z A;  2N17 A;  1TUS A;  2JW6 A;  4UXJ A;  1R79 A;  1Y1B A;  1LR9 A;  2JA1 A;  3UGD A;  1LR7 A;  5EX0 A;  2SGF I;  1TIH A;  2ODD A;  2JZM A;  1OVO A;  2NU2 I;  2DB6 A;  2KMO A;  3SEK C;  2V53 A;  2WCY A;  1VDD A;  2N52 A;  4GI3 C;  1X74 A;  3CXL A;  4SGB I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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