1SGRI

Leu 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords STREPTOMYCES GRISEUS PROTEINASE B
publication title Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.
pubmed rcsb
source organism Streptomyces griseus
molecule tags Complex (serine protease/inhibitor)
total genus 13
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1995-05-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgrI00
3HH2C 1IY6A 2BUSA 2M5XA 1TURA 2JYYA 2N71A 2SGPI 4OVOA 1PCEA 1TBRR 1SGYI 1CGII 1NUBA 1HDLA 2NU0I 5DAEA 1FYBA 2NU4I 1BMOA 2F3CI 1TUSA 2WCYA 2N52A 1TGSI 3SGQI 1CT4I 1UVGA 1UVFA 2SGDI 4SGBI 1HPTA 1SGRI 1PJUA 1Y1BA 1H0ZA 1CT2I 2ERWA 1HJAI 1CSOI 2NU1I 2OVOA 2P6AC 1KMAA 1YU6C 1IW4A 2KMRA 2GKRI 2SGEI 1SGEI 2KMQA 1SGQI 3TJQA 1OMUA 5JHWC 1SGPI 2ARPF 2SGQI 1YTPA 1OMTA 1SGDI 1Y1CA 1BUSA 1Z7KB 1SGNI 2NU2I 2SGFI 1LR8A 1LR7A 1TIHA 1OVOA 4GI3C 1PPFI 2NU3I 3QTLD 2KMPA 1M8BA 2KCXA 1UUCA 1CHOI 2XRCA 1TBQR 2QQCA 1DS3I 1CE3A 2LEOA 3SGBI 1CGJI 1IY5A 1MT1A 1R0RI 1N13A 2GKTI 2QQDA 2KMOA 3B4VC 4HGUA 1DS2I 1M8CA 2JZMA 2V53A 3OVOA 2JXDA 3SEKC 1OYVI 2B0UC 2N17A 2GKVA 1AN1I 1LR9A 1CT0I
chains in the Genus database with same CATH superfamily
3HH2C 1IY6A 4JCVE 2PQ8A 2BUSA 2QQ0A 2M5XA 3UOEA 1TURA 2JYYA 3TO7A 2K9HA 2N71A 5J8FA 1X74A 2SGPI 2W0TA 4OVOA 1S20A 2E73A 1PCEA 2X3TA 5HI7A 1TBRR 3R5DA 4AMLA 3TO9A 1SGYI 1CGII 1Q9BA 2Y0MA 2CWHA 2J9RA 1NUBA 1HDLA 2NU0I 5DAEA 3TOBA 1NXUA 2JA1A 3PDNA 5CCMA 5J8CA 3QWPA 1FYBA 1VDDA 1WGTA 1BMOA 2NU4I 4UXIA 3UEJA 2F3CI 1UHAA 1TUSA 2WCYA 4B6DA 1TGSI 2N52A 2ODDA 3SGQI 2VRWB 4MPIA 1CT4I 1UVGA 1UVFA 3VE5A 1V1IA 1FY7A 3FSXA 2A20A 3RU0A 3UGIA 3OL0A 2SGDI 3UEYA 2DKVA 4SGBI 5EX0A 1HPTA 5FUVA 1SGRI 1ULMA 1PJUA 2LB7A 1Y1BA 2L7XA 2WGCA 4DNCA 1H0ZA 1CT2I 2ERWA 1V1HA 2JW6A 1KBEA 1HJAI 1CSOI 2NU1I 1TBNA 2OVOA 2P6AC 1KMAA 2ENZA 1YU6C 2UZ3A 5E3QA 1IW4A 1K7TA 1WGCA 3VDUA 3OXFA 2OD1A 2KMRA 1XBTA 3CXLA 2GKRI 4E1RA 2SGEI 2YUUA 1SGEI 2CWGA 2KMQA 1SGQI 3KY9A 3MEKA 3TJQA 1OMUA 5JHWC 1SGPI 2RC4A 1KBFA 1PTRA 2ARPF 2SGQI 1YTPA 1OMTA 1SGDI 4WP4A 1Y1CA 1X4SA 2GIVA 1BUSA 2FNFX 3OXLA 2CJSC 3FC3A 1MJ9A 1Z7KB 1P9GA 1SGNI 2NU2I 1W4RA 2SGFI 2QPOA 3D00A 1FARA 2J87A 4FKDA 3QAHA 5CCLA 1LR8A 1LR7A 1RFHA 1K7UA 5FUXA 1TIHA 1OVOA 3BJIA 4GI3C 1PPFI 7WGAA 1P9ZA 2L8EA 2NU3I 2ROWA 5EX3A 2DIPA 1XX6A 2E5RA 2ORVA 1R79A 3QTLD 2QQEA 2ELIA 2KMPA 1M8BA 5E3RA 2KCXA 1UUCA 2ENNA 3UFFA 1CHOI 5FUWA 2LUYA 2XRCA 1W3SA 1MJAA 2V1CA 2OZUA 1TBQR 1Y8FA 2QQCA 3UGLA 1DS3I 1CE3A 2OU2A 2LEOA 2B8TA 3E2IA 3SGBI 1TOTA 1CGJI 2V1CC 1PTQA 1IY5A 1MT1A 3UGDA 3VDPA 1R0RI 2ORWA 1TBOA 4UXJA 2CWFA 1ULKA 1XA6A 1N13A 2GKTI 2WVJA 2X52A 2QQDA 1FAQA 2YQPA 3FSYA 1HEVA 2KMOA 4UXHA 3OXGA 3TOAA 9WGAA 3B4VC 4HGUA 3GOXA 5E3PA 3TO6A 5FUYA 1DS2I 4E1PA 1M8CA 4L9MA 3R5AA 1K7VA 3R5BA 1Z2IA 2UVOA 2JZMA 2V53A 3E59A 1MJBA 1U5KA 3OVOA 2DB6A 1ULNA 2GVIA 1WTJA 2N1AB 2JXDA 3SEKC 1OYVI 2B0UC 2N17A 2GKVA 3R5CA 1AN1I 1LR9A 2RIJA 1CT0I 4A24A 1WKXA 5HQ8A
chains in the Genus database with same CATH topology
3HH2C 1IY6A 4JCVE 2BUSA 2QQ0A 2M5XA 1TURA 2JYYA 2K9HA 2N71A 1X74A 2SGPI 2W0TA 4OVOA 2E73A 1PCEA 5HI7A 1TBRR 1SGYI 1CGII 2J9RA 1NUBA 1HDLA 2NU0I 5DAEA 2JA1A 3PDNA 5CCMA 3QWPA 1FYBA 1VDDA 2NU4I 1BMOA 4UXIA 3UEJA 2F3CI 1TUSA 2WCYA 4B6DA 1TGSI 2N52A 2ODDA 3SGQI 2VRWB 3VE5A 1CT4I 1UVGA 1UVFA 1V1IA 2A20A 3RU0A 3UGIA 3OL0A 2SGDI 3UEYA 4SGBI 5EX0A 1HPTA 5FUVA 1SGRI 1PJUA 1Y1BA 2L7XA 1H0ZA 1CT2I 2ERWA 1V1HA 2JW6A 1KBEA 1HJAI 1CSOI 2NU1I 1TBNA 2OVOA 2P6AC 1KMAA 2ENZA 1YU6C 2UZ3A 1IW4A 3VDUA 3OXFA 2OD1A 2KMRA 1XBTA 3CXLA 2GKRI 4E1RA 2SGEI 2YUUA 1SGEI 2KMQA 3KY9A 1SGQI 3MEKA 3TJQA 1OMUA 5JHWC 1SGPI 1KBFA 1PTRA 2ARPF 2SGQI 1YTPA 1OMTA 1SGDI 1Y1CA 1X4SA 1BUSA 2FNFX 3OXLA 2CJSC 3FC3A 1Z7KB 1SGNI 2NU2I 1W4RA 2SGFI 2QPOA 3D00A 1FARA 2J87A 4FKDA 5CCLA 1LR8A 1LR7A 1RFHA 5FUXA 1TIHA 1OVOA 3BJIA 4GI3C 1PPFI 2L8EA 2NU3I 2ROWA 5EX3A 2DIPA 1XX6A 2E5RA 2ORVA 1R79A 3QTLD 2QQEA 2ELIA 2KMPA 1M8BA 2KCXA 1UUCA 2ENNA 3UFFA 1CHOI 5FUWA 2LUYA 2XRCA 1W3SA 2V1CA 1TBQR 1Y8FA 2QQCA 3UGLA 1DS3I 1CE3A 2LEOA 2B8TA 3E2IA 3SGBI 1TOTA 1CGJI 2V1CC 1PTQA 1IY5A 1MT1A 3UGDA 3VDPA 1R0RI 2ORWA 1TBOA 4UXJA 1XA6A 1N13A 2GKTI 2WVJA 2QQDA 1FAQA 2YQPA 2KMOA 4UXHA 3OXGA 3GOXA 3B4VC 4HGUA 5FUYA 1DS2I 4E1PA 1M8CA 4L9MA 2JZMA 2V53A 3E59A 1U5KA 3OVOA 2DB6A 2GVIA 2N1AB 2JXDA 3SEKC 1OYVI 2B0UC 2N17A 2GKVA 1AN1I 1LR9A 4A24A 1CT0I 5HQ8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HH2 C;  1IY6 A;  2BUS A;  2M5X A;  1TUR A;  2JYY A;  2N71 A;  2SGP I;  4OVO A;  1PCE A;  1TBR R;  1SGY I;  1CGI I;  1NUB A;  1HDL A;  2NU0 I;  5DAE A;  1FYB A;  2NU4 I;  1BMO A;  2F3C I;  1TUS A;  2WCY A;  2N52 A;  1TGS I;  3SGQ I;  1CT4 I;  1UVG A;  1UVF A;  2SGD I;  4SGB I;  1HPT A;  1SGR I;  1PJU A;  1Y1B A;  1H0Z A;  1CT2 I;  2ERW A;  1HJA I;  1CSO I;  2NU1 I;  2OVO A;  2P6A C;  1KMA A;  1YU6 C;  1IW4 A;  2KMR A;  2GKR I;  2SGE I;  1SGE I;  2KMQ A;  1SGQ I;  3TJQ A;  1OMU A;  5JHW C;  1SGP I;  2ARP F;  2SGQ I;  1YTP A;  1OMT A;  1SGD I;  1Y1C A;  1BUS A;  1Z7K B;  1SGN I;  2NU2 I;  2SGF I;  1LR8 A;  1LR7 A;  1TIH A;  1OVO A;  4GI3 C;  1PPF I;  2NU3 I;  3QTL D;  2KMP A;  1M8B A;  2KCX A;  1UUC A;  1CHO I;  2XRC A;  1TBQ R;  2QQC A;  1DS3 I;  1CE3 A;  2LEO A;  3SGB I;  1CGJ I;  1IY5 A;  1MT1 A;  1R0R I;  1N13 A;  2GKT I;  2QQD A;  2KMO A;  3B4V C;  4HGU A;  1DS2 I;  1M8C A;  2JZM A;  2V53 A;  3OVO A;  2JXD A;  3SEK C;  1OYV I;  2B0U C;  2N17 A;  2GKV A;  1AN1 I;  1LR9 A;  1CT0 I; 
#chains in the Genus database with same CATH topology
 3HH2 C;  1IY6 A;  4JCV E;  2PQ8 A;  2BUS A;  2QQ0 A;  2M5X A;  3UOE A;  1TUR A;  2JYY A;  3TO7 A;  2K9H A;  2N71 A;  5J8F A;  1X74 A;  2SGP I;  2W0T A;  4OVO A;  1S20 A;  2E73 A;  1PCE A;  2X3T A;  5HI7 A;  1TBR R;  3R5D A;  4AML A;  3TO9 A;  1SGY I;  1CGI I;  1Q9B A;  2Y0M A;  2CWH A;  2J9R A;  1NUB A;  1HDL A;  2NU0 I;  5DAE A;  3TOB A;  1NXU A;  2JA1 A;  3PDN A;  5CCM A;  5J8C A;  3QWP A;  1FYB A;  1VDD A;  1WGT A;  1BMO A;  2NU4 I;  4UXI A;  3UEJ A;  2F3C I;  1UHA A;  1TUS A;  2WCY A;  4B6D A;  1TGS I;  2N52 A;  2ODD A;  3SGQ I;  2VRW B;  4MPI A;  1CT4 I;  1UVG A;  1UVF A;  3VE5 A;  1V1I A;  1FY7 A;  3FSX A;  2A20 A;  3RU0 A;  3UGI A;  3OL0 A;  2SGD I;  3UEY A;  2DKV A;  4SGB I;  5EX0 A;  1HPT A;  5FUV A;  1SGR I;  1ULM A;  1PJU A;  2LB7 A;  1Y1B A;  2L7X A;  2WGC A;  4DNC A;  1H0Z A;  1CT2 I;  2ERW A;  1V1H A;  2JW6 A;  1KBE A;  1HJA I;  1CSO I;  2NU1 I;  1TBN A;  2OVO A;  2P6A C;  1KMA A;  2ENZ A;  1YU6 C;  2UZ3 A;  5E3Q A;  1IW4 A;  1K7T A;  1WGC A;  3VDU A;  3OXF A;  2OD1 A;  2KMR A;  1XBT A;  3CXL A;  2GKR I;  4E1R A;  2SGE I;  2YUU A;  1SGE I;  2CWG A;  2KMQ A;  1SGQ I;  3KY9 A;  3MEK A;  3TJQ A;  1OMU A;  5JHW C;  1SGP I;  2RC4 A;  1KBF A;  1PTR A;  2ARP F;  2SGQ I;  1YTP A;  1OMT A;  1SGD I;  4WP4 A;  1Y1C A;  1X4S A;  2GIV A;  1BUS A;  2FNF X;  3OXL A;  2CJS C;  3FC3 A;  1MJ9 A;  1Z7K B;  1P9G A;  1SGN I;  2NU2 I;  1W4R A;  2SGF I;  2QPO A;  3D00 A;  1FAR A;  2J87 A;  4FKD A;  3QAH A;  5CCL A;  1LR8 A;  1LR7 A;  1RFH A;  1K7U A;  5FUX A;  1TIH A;  1OVO A;  3BJI A;  4GI3 C;  1PPF I;  7WGA A;  1P9Z A;  2L8E A;  2NU3 I;  2ROW A;  5EX3 A;  2DIP A;  1XX6 A;  2E5R A;  2ORV A;  1R79 A;  3QTL D;  2QQE A;  2ELI A;  2KMP A;  1M8B A;  5E3R A;  2KCX A;  1UUC A;  2ENN A;  3UFF A;  1CHO I;  5FUW A;  2LUY A;  2XRC A;  1W3S A;  1MJA A;  2V1C A;  2OZU A;  1TBQ R;  1Y8F A;  2QQC A;  3UGL A;  1DS3 I;  1CE3 A;  2OU2 A;  2LEO A;  2B8T A;  3E2I A;  3SGB I;  1TOT A;  1CGJ I;  2V1C C;  1PTQ A;  1IY5 A;  1MT1 A;  3UGD A;  3VDP A;  1R0R I;  2ORW A;  1TBO A;  4UXJ A;  2CWF A;  1ULK A;  1XA6 A;  1N13 A;  2GKT I;  2WVJ A;  2X52 A;  2QQD A;  1FAQ A;  2YQP A;  3FSY A;  1HEV A;  2KMO A;  4UXH A;  3OXG A;  3TOA A;  9WGA A;  3B4V C;  4HGU A;  3GOX A;  5E3P A;  3TO6 A;  5FUY A;  1DS2 I;  4E1P A;  1M8C A;  4L9M A;  3R5A A;  1K7V A;  3R5B A;  1Z2I A;  2UVO A;  2JZM A;  2V53 A;  3E59 A;  1MJB A;  1U5K A;  3OVO A;  2DB6 A;  1ULN A;  2GVI A;  1WTJ A;  2N1A B;  2JXD A;  3SEK C;  1OYV I;  2B0U C;  2N17 A;  2GKV A;  3R5C A;  1AN1 I;  1LR9 A;  2RIJ A;  1CT0 I;  4A24 A;  1WKX A;  5HQ8 A; 
#chains in the Genus database with same CATH homology
 3HH2 C;  1IY6 A;  4JCV E;  2BUS A;  2QQ0 A;  2M5X A;  1TUR A;  2JYY A;  2K9H A;  2N71 A;  1X74 A;  2SGP I;  2W0T A;  4OVO A;  2E73 A;  1PCE A;  5HI7 A;  1TBR R;  1SGY I;  1CGI I;  2J9R A;  1NUB A;  1HDL A;  2NU0 I;  5DAE A;  2JA1 A;  3PDN A;  5CCM A;  3QWP A;  1FYB A;  1VDD A;  2NU4 I;  1BMO A;  4UXI A;  3UEJ A;  2F3C I;  1TUS A;  2WCY A;  4B6D A;  1TGS I;  2N52 A;  2ODD A;  3SGQ I;  2VRW B;  3VE5 A;  1CT4 I;  1UVG A;  1UVF A;  1V1I A;  2A20 A;  3RU0 A;  3UGI A;  3OL0 A;  2SGD I;  3UEY A;  4SGB I;  5EX0 A;  1HPT A;  5FUV A;  1SGR I;  1PJU A;  1Y1B A;  2L7X A;  1H0Z A;  1CT2 I;  2ERW A;  1V1H A;  2JW6 A;  1KBE A;  1HJA I;  1CSO I;  2NU1 I;  1TBN A;  2OVO A;  2P6A C;  1KMA A;  2ENZ A;  1YU6 C;  2UZ3 A;  1IW4 A;  3VDU A;  3OXF A;  2OD1 A;  2KMR A;  1XBT A;  3CXL A;  2GKR I;  4E1R A;  2SGE I;  2YUU A;  1SGE I;  2KMQ A;  3KY9 A;  1SGQ I;  3MEK A;  3TJQ A;  1OMU A;  5JHW C;  1SGP I;  1KBF A;  1PTR A;  2ARP F;  2SGQ I;  1YTP A;  1OMT A;  1SGD I;  1Y1C A;  1X4S A;  1BUS A;  2FNF X;  3OXL A;  2CJS C;  3FC3 A;  1Z7K B;  1SGN I;  2NU2 I;  1W4R A;  2SGF I;  2QPO A;  3D00 A;  1FAR A;  2J87 A;  4FKD A;  5CCL A;  1LR8 A;  1LR7 A;  1RFH A;  5FUX A;  1TIH A;  1OVO A;  3BJI A;  4GI3 C;  1PPF I;  2L8E A;  2NU3 I;  2ROW A;  5EX3 A;  2DIP A;  1XX6 A;  2E5R A;  2ORV A;  1R79 A;  3QTL D;  2QQE A;  2ELI A;  2KMP A;  1M8B A;  2KCX A;  1UUC A;  2ENN A;  3UFF A;  1CHO I;  5FUW A;  2LUY A;  2XRC A;  1W3S A;  2V1C A;  1TBQ R;  1Y8F A;  2QQC A;  3UGL A;  1DS3 I;  1CE3 A;  2LEO A;  2B8T A;  3E2I A;  3SGB I;  1TOT A;  1CGJ I;  2V1C C;  1PTQ A;  1IY5 A;  1MT1 A;  3UGD A;  3VDP A;  1R0R I;  2ORW A;  1TBO A;  4UXJ A;  1XA6 A;  1N13 A;  2GKT I;  2WVJ A;  2QQD A;  1FAQ A;  2YQP A;  2KMO A;  4UXH A;  3OXG A;  3GOX A;  3B4V C;  4HGU A;  5FUY A;  1DS2 I;  4E1P A;  1M8C A;  4L9M A;  2JZM A;  2V53 A;  3E59 A;  1U5K A;  3OVO A;  2DB6 A;  2GVI A;  2N1A B;  2JXD A;  3SEK C;  1OYV I;  2B0U C;  2N17 A;  2GKV A;  1AN1 I;  1LR9 A;  4A24 A;  1CT0 I;  5HQ8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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