1SGRI

Leu 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Complex (serine protease/inhibitor)
molecule keywords STREPTOMYCES GRISEUS PROTEINASE B
publication title Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.
pubmed rcsb
source organism Streptomyces griseus
total genus 13
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1995-05-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgrI00
2NU2I 1PJUA 1MT1A 2NU4I 1M8BA 1PCEA 1BUSA 2BUSA 1HJAI 1UVGA 1CSOI 2KMPA 1CE3A 1OVOA 1HPTA 1LR7A 1OYVI 2GKRI 2JXDA 2N52A 3HH2C 2QQDA 1DS3I 2OVOA 2WCYA 1CT0I 2GKVA 2P6AC 2NU3I 1KMAA 1AN1I 2ARPF 2KMRA 1N13A 3SEKC 2F3CI 1SGYI 1Y1BA 2SGDI 3SGBI 2B0UC 1LR9A 2GKTI 1SGPI 2SGFI 1SGRI 3OVOA 3B4VC 4GI3C 3TJQA 1OMUA 2NU1I 2JZMA 1IY6A 1TBRR 2SGEI 5DAEA 1CGII 1M8CA 2QQCA 1SGDI 1LR8A 4SGBI 1CT4I 3QTLD 2KMOA 2SGPI 1PPFI 1IY5A 1TUSA 1DS2I 1TGSI 1H0ZA 1OMTA 2NU0I 1CHOI 1TBQR 2N17A 1FYBA 4OVOA 2N71A 4HGUA 3SGQI 1CT2I 1TIHA 1CGJI 2ERWA 2KMQA 1UUCA 2M5XA 1HDLA 2JYYA 1NUBA 1BMOA 1R0RI 1SGQI 2LEOA 1TURA 1Y1CA 1YTPA 2KCXA 1SGNI 1IW4A 1SGEI 2SGQI 5JHWC 1Z7KB 1UVFA 2XRCA 1YU6C 2V53A
chains in the Genus database with same CATH superfamily
2NU2I 5CCMA 1NXUA 1PJUA 1MT1A 2RIJA 2NU4I 1M8BA 1PCEA 2L7XA 2BUSA 1HJAI 1UVGA 3UEYA 1BUSA 1WGCA 5HI7A 3OXFA 1CSOI 2PQ8A 2KMPA 2K9HA 1W3SA 1OVOA 1HPTA 2RC4A 1CE3A 1LR7A 1OYVI 2UZ3A 2GKRI 2J87A 2B8TA 2CWHA 3UFFA 2W0TA 2V1CA 2JXDA 2ELIA 2N52A 3HH2C 1MJBA 2QQDA 1RFHA 2YUUA 2J9RA 1DS3I 2OVOA 2WCYA 1CT0I 2GKVA 3MEKA 4MPIA 5EX3A 3UGDA 3OXGA 2P6AC 3PDNA 2NU3I 1PTRA 1KMAA 1AN1I 2ARPF 2JA1A 2KMRA 2OZUA 1N13A 2QQ0A 2X52A 3SEKC 2F3CI 1SGYI 2OD1A 1K7UA 5FUWA 2ENZA 1Y1BA 3FSYA 2N1AB 2SGDI 4B6DA 3SGBI 2B0UC 2DIPA 1LR9A 3VE5A 5E3RA 2L8EA 2GKTI 2Y0MA 4AMLA 1ULKA 4A24A 1ULNA 1SGPI 2SGFI 2JW6A 1X4SA 2QQEA 3D00A 1SGRI 3OVOA 5EX0A 5FUYA 3UEJA 3B4VC 1W4RA 4GI3C 3TJQA 1TOTA 3OXLA 1TBOA 1XX6A 1Y8FA 1OMUA 1ULMA 1VDDA 2LUYA 2NU1I 1WGTA 1FY7A 3R5CA 1S20A 2JZMA 1IY6A 1P9GA 2VRWB 1TBRR 3E2IA 4E1RA 5HQ8A 2SGEI 2X3TA 2GIVA 5DAEA 2DKVA 2CWFA 1M8CA 1CGII 4UXHA 1FAQA 1TBNA 2QQCA 1SGDI 1XBTA 3UOEA 1LR8A 2E73A 3CXLA 4SGBI 3QWPA 5J8FA 1XA6A 1CT4I 3QTLD 2KMOA 1KBEA 2SGPI 1PPFI 1IY5A 1TUSA 3VDPA 1DS2I 2ROWA 3TOBA 2ORWA 5FUVA 4UXIA 4UXJA 1KBFA 4JCVE 1TGSI 1H0ZA 3VDUA 4WP4A 1OMTA 2NU0I 1CHOI 1P9ZA 3TO6A 5E3QA 1TBQR 1Z2IA 2UVOA 2WVJA 1FARA 3TO9A 3TO7A 1MJ9A 2N17A 1WTJA 2V1CC 1K7VA 5FUXA 1FYBA 4FKDA 3BJIA 1UHAA 4OVOA 2ODDA 2N71A 4HGUA 1PTQA 3SGQI 1CT2I 1Q9BA 1K7TA 1TIHA 1CGJI 2ORVA 1X74A 1V1HA 2ERWA 2GVIA 2E5RA 2QPOA 3QAHA 3R5AA 3FC3A 2YQPA 7WGAA 2KMQA 2DB6A 4L9MA 1UUCA 2M5XA 3E59A 1V1IA 2CJSC 1HDLA 1WKXA 3UGLA 2JYYA 2WGCA 1NUBA 3FSXA 2CWGA 1BMOA 1R0RI 1SGQI 2LEOA 1TURA 1U5KA 2FNFX 2OU2A 3R5DA 4E1PA 5J8CA 3TOAA 1Y1CA 3RU0A 1YTPA 1MJAA 2KCXA 2ENNA 1SGNI 1IW4A 4DNCA 5CCLA 5E3PA 1SGEI 2LB7A 3UGIA 3GOXA 2SGQI 5JHWC 3R5BA 1R79A 1UVFA 1Z7KB 2XRCA 3KY9A 9WGAA 1HEVA 1YU6C 2V53A 2A20A 3OL0A
chains in the Genus database with same CATH topology
2NU2I 5CCMA 1PJUA 1MT1A 2NU4I 1M8BA 1PCEA 2L7XA 2BUSA 1HJAI 1UVGA 3UEYA 1BUSA 5HI7A 3OXFA 1CSOI 2KMPA 2K9HA 1W3SA 1OVOA 1HPTA 1CE3A 1LR7A 1OYVI 2UZ3A 2GKRI 2J87A 2B8TA 3UFFA 2W0TA 2V1CA 2JXDA 2ELIA 2N52A 3HH2C 2YUUA 2QQDA 1RFHA 2J9RA 1DS3I 2OVOA 2WCYA 1CT0I 2GKVA 3MEKA 5EX3A 3UGDA 3OXGA 2P6AC 3PDNA 2NU3I 1PTRA 1KMAA 1AN1I 2ARPF 2JA1A 2KMRA 2QQ0A 1N13A 3SEKC 2F3CI 1SGYI 2OD1A 5FUWA 2ENZA 1Y1BA 2N1AB 2SGDI 4B6DA 3SGBI 2B0UC 2DIPA 1LR9A 3VE5A 2L8EA 2GKTI 4A24A 1SGPI 2SGFI 2JW6A 1X4SA 2QQEA 3D00A 1SGRI 3OVOA 5EX0A 5FUYA 3UEJA 3B4VC 1W4RA 4GI3C 3TJQA 1TOTA 3OXLA 1TBOA 1XX6A 1Y8FA 1OMUA 1VDDA 2LUYA 2NU1I 2JZMA 1IY6A 2VRWB 1TBRR 3E2IA 4E1RA 5HQ8A 2SGEI 5DAEA 1CGII 1M8CA 4UXHA 1FAQA 1TBNA 2QQCA 1SGDI 1XBTA 1LR8A 2E73A 3CXLA 4SGBI 1XA6A 1CT4I 3QTLD 2KMOA 1KBEA 2SGPI 1PPFI 1IY5A 1TUSA 3VDPA 1DS2I 2ROWA 2ORWA 5FUVA 4UXIA 4UXJA 1KBFA 4JCVE 1TGSI 1H0ZA 3VDUA 1OMTA 2NU0I 1CHOI 1TBQR 2WVJA 1FARA 2N17A 5FUXA 2V1CC 1FYBA 4FKDA 3BJIA 4OVOA 2ODDA 2N71A 4HGUA 1PTQA 3SGQI 1CT2I 3QWPA 1TIHA 1CGJI 2ORVA 1X74A 1V1HA 2ERWA 2GVIA 2E5RA 2QPOA 3FC3A 2YQPA 2KMQA 2DB6A 4L9MA 1UUCA 2M5XA 3E59A 1V1IA 2CJSC 1HDLA 3UGLA 2JYYA 1NUBA 1BMOA 1R0RI 1SGQI 2LEOA 1TURA 1U5KA 2FNFX 4E1PA 1Y1CA 3RU0A 1YTPA 2KCXA 2ENNA 1SGNI 1IW4A 5CCLA 1SGEI 3UGIA 3GOXA 2SGQI 5JHWC 1R79A 1UVFA 1Z7KB 2XRCA 3KY9A 1YU6C 2V53A 2A20A 3OL0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NU2 I;  1PJU A;  1MT1 A;  2NU4 I;  1M8B A;  1PCE A;  1BUS A;  2BUS A;  1HJA I;  1UVG A;  1CSO I;  2KMP A;  1CE3 A;  1OVO A;  1HPT A;  1LR7 A;  1OYV I;  2GKR I;  2JXD A;  2N52 A;  3HH2 C;  2QQD A;  1DS3 I;  2OVO A;  2WCY A;  1CT0 I;  2GKV A;  2P6A C;  2NU3 I;  1KMA A;  1AN1 I;  2ARP F;  2KMR A;  1N13 A;  3SEK C;  2F3C I;  1SGY I;  1Y1B A;  2SGD I;  3SGB I;  2B0U C;  1LR9 A;  2GKT I;  1SGP I;  2SGF I;  1SGR I;  3OVO A;  3B4V C;  4GI3 C;  3TJQ A;  1OMU A;  2NU1 I;  2JZM A;  1IY6 A;  1TBR R;  2SGE I;  5DAE A;  1CGI I;  1M8C A;  2QQC A;  1SGD I;  1LR8 A;  4SGB I;  1CT4 I;  3QTL D;  2KMO A;  2SGP I;  1PPF I;  1IY5 A;  1TUS A;  1DS2 I;  1TGS I;  1H0Z A;  1OMT A;  2NU0 I;  1CHO I;  1TBQ R;  2N17 A;  1FYB A;  4OVO A;  2N71 A;  4HGU A;  3SGQ I;  1CT2 I;  1TIH A;  1CGJ I;  2ERW A;  2KMQ A;  1UUC A;  2M5X A;  1HDL A;  2JYY A;  1NUB A;  1BMO A;  1R0R I;  1SGQ I;  2LEO A;  1TUR A;  1Y1C A;  1YTP A;  2KCX A;  1SGN I;  1IW4 A;  1SGE I;  2SGQ I;  5JHW C;  1Z7K B;  1UVF A;  2XRC A;  1YU6 C;  2V53 A; 
#chains in the Genus database with same CATH topology
 2NU2 I;  5CCM A;  1NXU A;  1PJU A;  1MT1 A;  2RIJ A;  2NU4 I;  1M8B A;  1PCE A;  2L7X A;  2BUS A;  1HJA I;  1UVG A;  3UEY A;  1BUS A;  1WGC A;  5HI7 A;  3OXF A;  1CSO I;  2PQ8 A;  2KMP A;  2K9H A;  1W3S A;  1OVO A;  1HPT A;  2RC4 A;  1CE3 A;  1LR7 A;  1OYV I;  2UZ3 A;  2GKR I;  2J87 A;  2B8T A;  2CWH A;  3UFF A;  2W0T A;  2V1C A;  2JXD A;  2ELI A;  2N52 A;  3HH2 C;  1MJB A;  2QQD A;  1RFH A;  2YUU A;  2J9R A;  1DS3 I;  2OVO A;  2WCY A;  1CT0 I;  2GKV A;  3MEK A;  4MPI A;  5EX3 A;  3UGD A;  3OXG A;  2P6A C;  3PDN A;  2NU3 I;  1PTR A;  1KMA A;  1AN1 I;  2ARP F;  2JA1 A;  2KMR A;  2OZU A;  1N13 A;  2QQ0 A;  2X52 A;  3SEK C;  2F3C I;  1SGY I;  2OD1 A;  1K7U A;  5FUW A;  2ENZ A;  1Y1B A;  3FSY A;  2N1A B;  2SGD I;  4B6D A;  3SGB I;  2B0U C;  2DIP A;  1LR9 A;  3VE5 A;  5E3R A;  2L8E A;  2GKT I;  2Y0M A;  4AML A;  1ULK A;  4A24 A;  1ULN A;  1SGP I;  2SGF I;  2JW6 A;  1X4S A;  2QQE A;  3D00 A;  1SGR I;  3OVO A;  5EX0 A;  5FUY A;  3UEJ A;  3B4V C;  1W4R A;  4GI3 C;  3TJQ A;  1TOT A;  3OXL A;  1TBO A;  1XX6 A;  1Y8F A;  1OMU A;  1ULM A;  1VDD A;  2LUY A;  2NU1 I;  1WGT A;  1FY7 A;  3R5C A;  1S20 A;  2JZM A;  1IY6 A;  1P9G A;  2VRW B;  1TBR R;  3E2I A;  4E1R A;  5HQ8 A;  2SGE I;  2X3T A;  2GIV A;  5DAE A;  2DKV A;  2CWF A;  1M8C A;  1CGI I;  4UXH A;  1FAQ A;  1TBN A;  2QQC A;  1SGD I;  1XBT A;  3UOE A;  1LR8 A;  2E73 A;  3CXL A;  4SGB I;  3QWP A;  5J8F A;  1XA6 A;  1CT4 I;  3QTL D;  2KMO A;  1KBE A;  2SGP I;  1PPF I;  1IY5 A;  1TUS A;  3VDP A;  1DS2 I;  2ROW A;  3TOB A;  2ORW A;  5FUV A;  4UXI A;  4UXJ A;  1KBF A;  4JCV E;  1TGS I;  1H0Z A;  3VDU A;  4WP4 A;  1OMT A;  2NU0 I;  1CHO I;  1P9Z A;  3TO6 A;  5E3Q A;  1TBQ R;  1Z2I A;  2UVO A;  2WVJ A;  1FAR A;  3TO9 A;  3TO7 A;  1MJ9 A;  2N17 A;  1WTJ A;  2V1C C;  1K7V A;  5FUX A;  1FYB A;  4FKD A;  3BJI A;  1UHA A;  4OVO A;  2ODD A;  2N71 A;  4HGU A;  1PTQ A;  3SGQ I;  1CT2 I;  1Q9B A;  1K7T A;  1TIH A;  1CGJ I;  2ORV A;  1X74 A;  1V1H A;  2ERW A;  2GVI A;  2E5R A;  2QPO A;  3QAH A;  3R5A A;  3FC3 A;  2YQP A;  7WGA A;  2KMQ A;  2DB6 A;  4L9M A;  1UUC A;  2M5X A;  3E59 A;  1V1I A;  2CJS C;  1HDL A;  1WKX A;  3UGL A;  2JYY A;  2WGC A;  1NUB A;  3FSX A;  2CWG A;  1BMO A;  1R0R I;  1SGQ I;  2LEO A;  1TUR A;  1U5K A;  2FNF X;  2OU2 A;  3R5D A;  4E1P A;  5J8C A;  3TOA A;  1Y1C A;  3RU0 A;  1YTP A;  1MJA A;  2KCX A;  2ENN A;  1SGN I;  1IW4 A;  4DNC A;  5CCL A;  5E3P A;  1SGE I;  2LB7 A;  3UGI A;  3GOX A;  2SGQ I;  5JHW C;  3R5B A;  1R79 A;  1UVF A;  1Z7K B;  2XRC A;  3KY9 A;  9WGA A;  1HEV A;  1YU6 C;  2V53 A;  2A20 A;  3OL0 A; 
#chains in the Genus database with same CATH homology
 2NU2 I;  5CCM A;  1PJU A;  1MT1 A;  2NU4 I;  1M8B A;  1PCE A;  2L7X A;  2BUS A;  1HJA I;  1UVG A;  3UEY A;  1BUS A;  5HI7 A;  3OXF A;  1CSO I;  2KMP A;  2K9H A;  1W3S A;  1OVO A;  1HPT A;  1CE3 A;  1LR7 A;  1OYV I;  2UZ3 A;  2GKR I;  2J87 A;  2B8T A;  3UFF A;  2W0T A;  2V1C A;  2JXD A;  2ELI A;  2N52 A;  3HH2 C;  2YUU A;  2QQD A;  1RFH A;  2J9R A;  1DS3 I;  2OVO A;  2WCY A;  1CT0 I;  2GKV A;  3MEK A;  5EX3 A;  3UGD A;  3OXG A;  2P6A C;  3PDN A;  2NU3 I;  1PTR A;  1KMA A;  1AN1 I;  2ARP F;  2JA1 A;  2KMR A;  2QQ0 A;  1N13 A;  3SEK C;  2F3C I;  1SGY I;  2OD1 A;  5FUW A;  2ENZ A;  1Y1B A;  2N1A B;  2SGD I;  4B6D A;  3SGB I;  2B0U C;  2DIP A;  1LR9 A;  3VE5 A;  2L8E A;  2GKT I;  4A24 A;  1SGP I;  2SGF I;  2JW6 A;  1X4S A;  2QQE A;  3D00 A;  1SGR I;  3OVO A;  5EX0 A;  5FUY A;  3UEJ A;  3B4V C;  1W4R A;  4GI3 C;  3TJQ A;  1TOT A;  3OXL A;  1TBO A;  1XX6 A;  1Y8F A;  1OMU A;  1VDD A;  2LUY A;  2NU1 I;  2JZM A;  1IY6 A;  2VRW B;  1TBR R;  3E2I A;  4E1R A;  5HQ8 A;  2SGE I;  5DAE A;  1CGI I;  1M8C A;  4UXH A;  1FAQ A;  1TBN A;  2QQC A;  1SGD I;  1XBT A;  1LR8 A;  2E73 A;  3CXL A;  4SGB I;  1XA6 A;  1CT4 I;  3QTL D;  2KMO A;  1KBE A;  2SGP I;  1PPF I;  1IY5 A;  1TUS A;  3VDP A;  1DS2 I;  2ROW A;  2ORW A;  5FUV A;  4UXI A;  4UXJ A;  1KBF A;  4JCV E;  1TGS I;  1H0Z A;  3VDU A;  1OMT A;  2NU0 I;  1CHO I;  1TBQ R;  2WVJ A;  1FAR A;  2N17 A;  5FUX A;  2V1C C;  1FYB A;  4FKD A;  3BJI A;  4OVO A;  2ODD A;  2N71 A;  4HGU A;  1PTQ A;  3SGQ I;  1CT2 I;  3QWP A;  1TIH A;  1CGJ I;  2ORV A;  1X74 A;  1V1H A;  2ERW A;  2GVI A;  2E5R A;  2QPO A;  3FC3 A;  2YQP A;  2KMQ A;  2DB6 A;  4L9M A;  1UUC A;  2M5X A;  3E59 A;  1V1I A;  2CJS C;  1HDL A;  3UGL A;  2JYY A;  1NUB A;  1BMO A;  1R0R I;  1SGQ I;  2LEO A;  1TUR A;  1U5K A;  2FNF X;  4E1P A;  1Y1C A;  3RU0 A;  1YTP A;  2KCX A;  2ENN A;  1SGN I;  1IW4 A;  5CCL A;  1SGE I;  3UGI A;  3GOX A;  2SGQ I;  5JHW C;  1R79 A;  1UVF A;  1Z7K B;  2XRC A;  3KY9 A;  1YU6 C;  2V53 A;  2A20 A;  3OL0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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