1SGRI

Leu 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Complex (serine protease/inhibitor)
source organism Streptomyces griseus
publication title Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.
pubmed rcsb
molecule keywords STREPTOMYCES GRISEUS PROTEINASE B
total genus 13
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1995-05-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgrI00
2P6AC 2WCYA 2B0UC 2SGFI 1OVOA 1DS3I 1CT4I 2JYYA 3SEKC 3SGQI 1LR7A 1IY5A 1UVFA 2XRCA 2BUSA 1N13A 1Z7KB 2NU4I 2GKRI 1DS2I 3HH2C 1OYVI 1H0ZA 1CSOI 2NU2I 2QQDA 2NU0I 1OMUA 1SGRI 1CGII 2KMOA 2N71A 1SGPI 1PJUA 2F3CI 1Y1BA 1HPTA 2KMQA 1KMAA 2M5XA 1PCEA 2JZMA 4HGUA 4SGBI 3SGBI 2N52A 2ERWA 1CT2I 2SGDI 1AN1I 1TBQR 1YTPA 1YU6C 3QTLD 2SGPI 2NU1I 4GI3C 1CE3A 1TIHA 1BUSA 2SGEI 2GKTI 2OVOA 1TGSI 4OVOA 2KMPA 1TUSA 1TBRR 1HDLA 2SGQI 1SGDI 1M8BA 5DAEA 1SGNI 2NU3I 1OMTA 2GKVA 1IW4A 1UVGA 1LR8A 1SGEI 1CGJI 1MT1A 3TJQA 3B4VC 5JHWC 2KCXA 1TURA 1FYBA 1SGYI 1PPFI 1IY6A 1Y1CA 1BMOA 2JXDA 1SGQI 1UUCA 2QQCA 2KMRA 2ARPF 3OVOA 1R0RI 1M8CA 1LR9A 1CHOI 1HJAI 2LEOA 2N17A 2V53A 1NUBA 1CT0I
chains in the Genus database with same CATH superfamily
5CCMA 2P6AC 2LB7A 5J8CA 2WCYA 2B0UC 2GIVA 1OVOA 1V1HA 2SGFI 3TOAA 3R5AA 2OD1A 2L8EA 1DS3I 4WP4A 1CT4I 1R79A 3VDPA 2JYYA 2RC4A 2ROWA 3QAHA 1NXUA 3SEKC 2UVOA 1RFHA 3SGQI 3TO9A 1KBFA 2K9HA 3E59A 2DB6A 4B6DA 2OU2A 1LR7A 4DNCA 1MJ9A 1PTRA 2E73A 2W0TA 4JCVE 5EX3A 1IY5A 1P9GA 1UVFA 3UGLA 3UEYA 3QWPA 2L7XA 1Y8FA 2E5RA 2BUSA 2XRCA 7WGAA 1XBTA 1N13A 1Z7KB 2VRWB 2LUYA 2NU4I 2PQ8A 3UFFA 2WVJA 5E3RA 2GKRI 1DS2I 3FC3A 1S20A 3HH2C 4L9MA 3VDUA 1U5KA 1OYVI 1H0ZA 1CSOI 3FSYA 3VE5A 1WKXA 1XA6A 2NU2I 3UGDA 3FSXA 1TOTA 5E3PA 1X74A 2UZ3A 2QQDA 1W3SA 2NU0I 1OMUA 1SGRI 3E2IA 4FKDA 5EX0A 1CGII 2KMOA 2N71A 1K7VA 1SGPI 2V1CC 1PJUA 2F3CI 1Y1BA 1HPTA 2KMQA 2YUUA 3CXLA 3OXLA 5J8FA 1KMAA 2M5XA 1V1IA 3OL0A 5FUXA 1PCEA 2JZMA 1FARA 4HGUA 1FAQA 4SGBI 2RIJA 3SGBI 2N52A 3TO6A 2ERWA 2GVIA 4E1RA 2ENNA 1CT2I 3PDNA 1Q9BA 9WGAA 2SGDI 1AN1I 1TBQR 1YTPA 5FUVA 5FUWA 1WGCA 1YU6C 2J87A 3D00A 2SGPI 3QTLD 2ORVA 3R5DA 2DKVA 4E1PA 2NU1I 4GI3C 1CE3A 1TIHA 3TO7A 1BUSA 3TOBA 3UGIA 4UXJA 2SGEI 5E3QA 1TBOA 2ELIA 2GKTI 2QPOA 2OVOA 1TGSI 1FY7A 1MJBA 4OVOA 3BJIA 2CWGA 1WTJA 2ENZA 2KMPA 1TUSA 1TBRR 2B8TA 2CWHA 1SGDI 2SGQI 1M8BA 5DAEA 3GOXA 1HDLA 2JA1A 2J9RA 1SGNI 4UXHA 2QQ0A 2NU3I 1W4RA 1OMTA 2QQEA 5FUYA 2GKVA 1IW4A 1TBNA 1UVGA 1LR8A 1P9ZA 1SGEI 1K7TA 1MJAA 1CGJI 3R5BA 1PTQA 1MT1A 1ULMA 3TJQA 3OXGA 5CCLA 3B4VC 2FNFX 2YQPA 4A24A 2KCXA 2N1AB 2JW6A 5JHWC 2V1CA 1TURA 2ODDA 2X52A 3UOEA 3OXFA 2A20A 3KY9A 3MEKA 1SGYI 1ULNA 1WGTA 1FYBA 1XX6A 4MPIA 1PPFI 1IY6A 1UHAA 1Y1CA 1X4SA 5HI7A 1BMOA 3UEJA 2X3TA 2JXDA 2CJSC 1VDDA 4UXIA 1SGQI 2Y0MA 5HQ8A 1HEVA 1UUCA 1Z2IA 2QQCA 2KMRA 2ARPF 3OVOA 3R5CA 1K7UA 1R0RI 1KBEA 2OZUA 1M8CA 1LR9A 2DIPA 1CHOI 1HJAI 2CWFA 2LEOA 2ORWA 2N17A 2V53A 2WGCA 1ULKA 1NUBA 3RU0A 4AMLA 1CT0I
chains in the Genus database with same CATH topology
5CCMA 2P6AC 2WCYA 2B0UC 2SGFI 1OVOA 1V1HA 2OD1A 2L8EA 1DS3I 1CT4I 1R79A 3VDPA 2JYYA 2ROWA 3SEKC 1RFHA 3SGQI 1KBFA 2K9HA 3E59A 2DB6A 4B6DA 1LR7A 1PTRA 2E73A 1IY5A 2W0TA 4JCVE 5EX3A 1UVFA 3UGLA 3UEYA 3QWPA 2L7XA 1Y8FA 2E5RA 2BUSA 2XRCA 1XBTA 1N13A 1Z7KB 2VRWB 2LUYA 2NU4I 3UFFA 2WVJA 2GKRI 1DS2I 3FC3A 3HH2C 4L9MA 3VDUA 1U5KA 1OYVI 1H0ZA 1CSOI 3VE5A 1XA6A 2NU2I 3UGDA 1TOTA 1X74A 2UZ3A 2QQDA 1W3SA 2NU0I 1OMUA 1SGRI 3E2IA 4FKDA 5EX0A 1CGII 2KMOA 2N71A 1SGPI 2V1CC 1PJUA 2F3CI 1Y1BA 1HPTA 2KMQA 2YUUA 3CXLA 3OXLA 1KMAA 2M5XA 1V1IA 3OL0A 5FUXA 1PCEA 2JZMA 1FARA 4HGUA 1FAQA 4SGBI 3SGBI 2N52A 2ERWA 2GVIA 4E1RA 2ENNA 1CT2I 3PDNA 2SGDI 1AN1I 1TBQR 1YTPA 5FUVA 5FUWA 1YU6C 2J87A 3D00A 2SGPI 3QTLD 2ORVA 4E1PA 2NU1I 4GI3C 1CE3A 1TIHA 1BUSA 3UGIA 4UXJA 2SGEI 1TBOA 2ELIA 2GKTI 2QPOA 2OVOA 1TGSI 4OVOA 3BJIA 2ENZA 2KMPA 1TUSA 1TBRR 2B8TA 2SGQI 1SGDI 3GOXA 1M8BA 5DAEA 1HDLA 2JA1A 2J9RA 1SGNI 4UXHA 2QQ0A 2NU3I 1W4RA 1OMTA 2QQEA 5FUYA 2GKVA 1IW4A 1TBNA 1UVGA 1LR8A 1SGEI 1CGJI 1PTQA 1MT1A 3TJQA 3OXGA 5CCLA 3B4VC 2FNFX 2YQPA 4A24A 2KCXA 2N1AB 2JW6A 5JHWC 2V1CA 1TURA 2ODDA 3OXFA 2A20A 3KY9A 3MEKA 1SGYI 1FYBA 1XX6A 1PPFI 1IY6A 1Y1CA 1X4SA 5HI7A 1BMOA 3UEJA 2JXDA 2CJSC 1VDDA 4UXIA 1SGQI 5HQ8A 1UUCA 2QQCA 2KMRA 2ARPF 3OVOA 1R0RI 1KBEA 1M8CA 1LR9A 2DIPA 1CHOI 1HJAI 2LEOA 2ORWA 2N17A 2V53A 3RU0A 1NUBA 1CT0I
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2P6A C;  2WCY A;  2B0U C;  2SGF I;  1OVO A;  1DS3 I;  1CT4 I;  2JYY A;  3SEK C;  3SGQ I;  1LR7 A;  1IY5 A;  1UVF A;  2XRC A;  2BUS A;  1N13 A;  1Z7K B;  2NU4 I;  2GKR I;  1DS2 I;  3HH2 C;  1OYV I;  1H0Z A;  1CSO I;  2NU2 I;  2QQD A;  2NU0 I;  1OMU A;  1SGR I;  1CGI I;  2KMO A;  2N71 A;  1SGP I;  1PJU A;  2F3C I;  1Y1B A;  1HPT A;  2KMQ A;  1KMA A;  2M5X A;  1PCE A;  2JZM A;  4HGU A;  4SGB I;  3SGB I;  2N52 A;  2ERW A;  1CT2 I;  2SGD I;  1AN1 I;  1TBQ R;  1YTP A;  1YU6 C;  3QTL D;  2SGP I;  2NU1 I;  4GI3 C;  1CE3 A;  1TIH A;  1BUS A;  2SGE I;  2GKT I;  2OVO A;  1TGS I;  4OVO A;  2KMP A;  1TUS A;  1TBR R;  1HDL A;  2SGQ I;  1SGD I;  1M8B A;  5DAE A;  1SGN I;  2NU3 I;  1OMT A;  2GKV A;  1IW4 A;  1UVG A;  1LR8 A;  1SGE I;  1CGJ I;  1MT1 A;  3TJQ A;  3B4V C;  5JHW C;  2KCX A;  1TUR A;  1FYB A;  1SGY I;  1PPF I;  1IY6 A;  1Y1C A;  1BMO A;  2JXD A;  1SGQ I;  1UUC A;  2QQC A;  2KMR A;  2ARP F;  3OVO A;  1R0R I;  1M8C A;  1LR9 A;  1CHO I;  1HJA I;  2LEO A;  2N17 A;  2V53 A;  1NUB A;  1CT0 I; 
#chains in the Genus database with same CATH topology
 5CCM A;  2P6A C;  2LB7 A;  5J8C A;  2WCY A;  2B0U C;  2GIV A;  1OVO A;  1V1H A;  2SGF I;  3TOA A;  3R5A A;  2OD1 A;  2L8E A;  1DS3 I;  4WP4 A;  1CT4 I;  1R79 A;  3VDP A;  2JYY A;  2RC4 A;  2ROW A;  3QAH A;  1NXU A;  3SEK C;  2UVO A;  1RFH A;  3SGQ I;  3TO9 A;  1KBF A;  2K9H A;  3E59 A;  2DB6 A;  4B6D A;  2OU2 A;  1LR7 A;  4DNC A;  1MJ9 A;  1PTR A;  2E73 A;  2W0T A;  4JCV E;  5EX3 A;  1IY5 A;  1P9G A;  1UVF A;  3UGL A;  3UEY A;  3QWP A;  2L7X A;  1Y8F A;  2E5R A;  2BUS A;  2XRC A;  7WGA A;  1XBT A;  1N13 A;  1Z7K B;  2VRW B;  2LUY A;  2NU4 I;  2PQ8 A;  3UFF A;  2WVJ A;  5E3R A;  2GKR I;  1DS2 I;  3FC3 A;  1S20 A;  3HH2 C;  4L9M A;  3VDU A;  1U5K A;  1OYV I;  1H0Z A;  1CSO I;  3FSY A;  3VE5 A;  1WKX A;  1XA6 A;  2NU2 I;  3UGD A;  3FSX A;  1TOT A;  5E3P A;  1X74 A;  2UZ3 A;  2QQD A;  1W3S A;  2NU0 I;  1OMU A;  1SGR I;  3E2I A;  4FKD A;  5EX0 A;  1CGI I;  2KMO A;  2N71 A;  1K7V A;  1SGP I;  2V1C C;  1PJU A;  2F3C I;  1Y1B A;  1HPT A;  2KMQ A;  2YUU A;  3CXL A;  3OXL A;  5J8F A;  1KMA A;  2M5X A;  1V1I A;  3OL0 A;  5FUX A;  1PCE A;  2JZM A;  1FAR A;  4HGU A;  1FAQ A;  4SGB I;  2RIJ A;  3SGB I;  2N52 A;  3TO6 A;  2ERW A;  2GVI A;  4E1R A;  2ENN A;  1CT2 I;  3PDN A;  1Q9B A;  9WGA A;  2SGD I;  1AN1 I;  1TBQ R;  1YTP A;  5FUV A;  5FUW A;  1WGC A;  1YU6 C;  2J87 A;  3D00 A;  2SGP I;  3QTL D;  2ORV A;  3R5D A;  2DKV A;  4E1P A;  2NU1 I;  4GI3 C;  1CE3 A;  1TIH A;  3TO7 A;  1BUS A;  3TOB A;  3UGI A;  4UXJ A;  2SGE I;  5E3Q A;  1TBO A;  2ELI A;  2GKT I;  2QPO A;  2OVO A;  1TGS I;  1FY7 A;  1MJB A;  4OVO A;  3BJI A;  2CWG A;  1WTJ A;  2ENZ A;  2KMP A;  1TUS A;  1TBR R;  2B8T A;  2CWH A;  1SGD I;  2SGQ I;  1M8B A;  5DAE A;  3GOX A;  1HDL A;  2JA1 A;  2J9R A;  1SGN I;  4UXH A;  2QQ0 A;  2NU3 I;  1W4R A;  1OMT A;  2QQE A;  5FUY A;  2GKV A;  1IW4 A;  1TBN A;  1UVG A;  1LR8 A;  1P9Z A;  1SGE I;  1K7T A;  1MJA A;  1CGJ I;  3R5B A;  1PTQ A;  1MT1 A;  1ULM A;  3TJQ A;  3OXG A;  5CCL A;  3B4V C;  2FNF X;  2YQP A;  4A24 A;  2KCX A;  2N1A B;  2JW6 A;  5JHW C;  2V1C A;  1TUR A;  2ODD A;  2X52 A;  3UOE A;  3OXF A;  2A20 A;  3KY9 A;  3MEK A;  1SGY I;  1ULN A;  1WGT A;  1FYB A;  1XX6 A;  4MPI A;  1PPF I;  1IY6 A;  1UHA A;  1Y1C A;  1X4S A;  5HI7 A;  1BMO A;  3UEJ A;  2X3T A;  2JXD A;  2CJS C;  1VDD A;  4UXI A;  1SGQ I;  2Y0M A;  5HQ8 A;  1HEV A;  1UUC A;  1Z2I A;  2QQC A;  2KMR A;  2ARP F;  3OVO A;  3R5C A;  1K7U A;  1R0R I;  1KBE A;  2OZU A;  1M8C A;  1LR9 A;  2DIP A;  1CHO I;  1HJA I;  2CWF A;  2LEO A;  2ORW A;  2N17 A;  2V53 A;  2WGC A;  1ULK A;  1NUB A;  3RU0 A;  4AML A;  1CT0 I; 
#chains in the Genus database with same CATH homology
 5CCM A;  2P6A C;  2WCY A;  2B0U C;  2SGF I;  1OVO A;  1V1H A;  2OD1 A;  2L8E A;  1DS3 I;  1CT4 I;  1R79 A;  3VDP A;  2JYY A;  2ROW A;  3SEK C;  1RFH A;  3SGQ I;  1KBF A;  2K9H A;  3E59 A;  2DB6 A;  4B6D A;  1LR7 A;  1PTR A;  2E73 A;  1IY5 A;  2W0T A;  4JCV E;  5EX3 A;  1UVF A;  3UGL A;  3UEY A;  3QWP A;  2L7X A;  1Y8F A;  2E5R A;  2BUS A;  2XRC A;  1XBT A;  1N13 A;  1Z7K B;  2VRW B;  2LUY A;  2NU4 I;  3UFF A;  2WVJ A;  2GKR I;  1DS2 I;  3FC3 A;  3HH2 C;  4L9M A;  3VDU A;  1U5K A;  1OYV I;  1H0Z A;  1CSO I;  3VE5 A;  1XA6 A;  2NU2 I;  3UGD A;  1TOT A;  1X74 A;  2UZ3 A;  2QQD A;  1W3S A;  2NU0 I;  1OMU A;  1SGR I;  3E2I A;  4FKD A;  5EX0 A;  1CGI I;  2KMO A;  2N71 A;  1SGP I;  2V1C C;  1PJU A;  2F3C I;  1Y1B A;  1HPT A;  2KMQ A;  2YUU A;  3CXL A;  3OXL A;  1KMA A;  2M5X A;  1V1I A;  3OL0 A;  5FUX A;  1PCE A;  2JZM A;  1FAR A;  4HGU A;  1FAQ A;  4SGB I;  3SGB I;  2N52 A;  2ERW A;  2GVI A;  4E1R A;  2ENN A;  1CT2 I;  3PDN A;  2SGD I;  1AN1 I;  1TBQ R;  1YTP A;  5FUV A;  5FUW A;  1YU6 C;  2J87 A;  3D00 A;  2SGP I;  3QTL D;  2ORV A;  4E1P A;  2NU1 I;  4GI3 C;  1CE3 A;  1TIH A;  1BUS A;  3UGI A;  4UXJ A;  2SGE I;  1TBO A;  2ELI A;  2GKT I;  2QPO A;  2OVO A;  1TGS I;  4OVO A;  3BJI A;  2ENZ A;  2KMP A;  1TUS A;  1TBR R;  2B8T A;  2SGQ I;  1SGD I;  3GOX A;  1M8B A;  5DAE A;  1HDL A;  2JA1 A;  2J9R A;  1SGN I;  4UXH A;  2QQ0 A;  2NU3 I;  1W4R A;  1OMT A;  2QQE A;  5FUY A;  2GKV A;  1IW4 A;  1TBN A;  1UVG A;  1LR8 A;  1SGE I;  1CGJ I;  1PTQ A;  1MT1 A;  3TJQ A;  3OXG A;  5CCL A;  3B4V C;  2FNF X;  2YQP A;  4A24 A;  2KCX A;  2N1A B;  2JW6 A;  5JHW C;  2V1C A;  1TUR A;  2ODD A;  3OXF A;  2A20 A;  3KY9 A;  3MEK A;  1SGY I;  1FYB A;  1XX6 A;  1PPF I;  1IY6 A;  1Y1C A;  1X4S A;  5HI7 A;  1BMO A;  3UEJ A;  2JXD A;  2CJS C;  1VDD A;  4UXI A;  1SGQ I;  5HQ8 A;  1UUC A;  2QQC A;  2KMR A;  2ARP F;  3OVO A;  1R0R I;  1KBE A;  1M8C A;  1LR9 A;  2DIP A;  1CHO I;  1HJA I;  2LEO A;  2ORW A;  2N17 A;  2V53 A;  3RU0 A;  1NUB A;  1CT0 I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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