2FNFX

C1 domain of nore1
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
59
structure length
59
Chain Sequence
PRVLAERGEGHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRSLIQLDCR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Apoptosis
source organism Mus musculus
publication title GTP-Ras disrupts the intramolecular complex of C1 and RA domains of Nore1.
pubmed doi rcsb
molecule keywords putative Ras Effector Nore1
total genus 11
structure length 59
sequence length 59
ec nomenclature
pdb deposition date 2006-01-11
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2fnfX01
2ORWA 4B6DA 1KBFA 2WVJA 1RFHA 3CXLA 2ROWA 2ELIA 1KBEA 5FUWA 3E2IA 2JA1A 1PTQA 2ORVA 2J87A 2J9RA 1XBTA 2UZ3A 2FNFX 2QQEA 1XX6A 4L9MA 4UXHA 2DB6A 3UEJA 3UEYA 1PTRA 2GVIA 2QQ0A 2ENZA 3UGDA 2YUUA 4UXJA 3UFFA 2VRWB 3UGLA 4FKDA 5FUYA 1FAQA 1TBNA 2B8TA 3BJIA 5FUVA 1Y8FA 1TBOA 1XA6A 1R79A 4UXIA 2E73A 2QPOA 3KY9A 2ENNA 1W4RA 5FUXA 1FARA 3UGIA
chains in the Genus database with same CATH superfamily
1TBQR 2SGFI 1N13A 1YTPA 1ULMA 2DIPA 2LB7A 1RFHA 1UHAA 2ROWA 2ELIA 1IY5A 1UUCA 1HEVA 1TIHA 1TURA 2OD1A 1XBTA 1XX6A 3UEYA 2JZMA 3MEKA 3QTLD 2N1AB 3OL0A 1HDLA 1PCEA 2ENZA 4AMLA 1UVGA 2X3TA 3B4VC 1FYBA 2SGEI 2DKVA 1LR7A 4SGBI 1IW4A 2KMRA 5FUYA 2ERWA 1FAQA 3OVOA 3R5BA 2B0UC 2LEOA 5FUVA 2PQ8A 5EX0A 4E1RA 4UXIA 1FY7A 2SGPI 5HI7A 2QQDA 3KY9A 1W4RA 3QWPA 5FUXA 7WGAA 1NXUA 2JW6A 1SGEI 2WVJA 4HGUA 3TO9A 3GOXA 3VE5A 1P9GA 1PJUA 1DS3I 2CWFA 2QQCA 5FUWA 3E2IA 2V53A 2JA1A 1PTQA 2CWGA 1SGRI 2OVOA 1WTJA 2FNFX 2QQEA 2WGCA 4L9MA 2F3CI 2Y0MA 2DB6A 4UXHA 3SGQI 1S20A 1LR8A 1U5KA 2E5RA 2OZUA 3UEJA 4A24A 1X4SA 2X52A 1TOTA 5HQ8A 3SEKC 3TO7A 2BUSA 5JHWC 1SGPI 2YUUA 2KMPA 3UFFA 1IY6A 5EX3A 2L8EA 2N17A 2N71A 3R5DA 2B8TA 1WKXA 2SGQI 3HH2C 2NU4I 1XA6A 1MJBA 3OXGA 3FC3A 3PDNA 2ENNA 4DNCA 1OMTA 1CT2I 1FARA 2ODDA 1YU6C 2YQPA 3D00A 1SGYI 4B6DA 3FSYA 1KBFA 2P6AC 1P9ZA 3TJQA 1BUSA 4OVOA 3QAHA 2N52A 2LUYA 4GI3C 3OXFA 5E3PA 3VDUA 2J87A 2GKRI 2UZ3A 1OYVI 1MJAA 1SGQI 1Q9BA 1K7TA 1TBRR 4WP4A 1CT4I 1CGJI 1NUBA 3R5AA 3UGDA 1HJAI 2OU2A 2SGDI 2K9HA 2KMQA 3TOBA 1CT0I 2JXDA 9WGAA 1CE3A 2KMOA 1R0RI 1Y8FA 2XRCA 1Y1CA 1K7VA 1W3SA 2GIVA 1CHOI 1Z7KB 2E73A 1DS2I 2QPOA 2NU1I 3E59A 1M8BA 1Y1BA 2ORWA 1TUSA 4MPIA 5CCMA 1KMAA 2NU0I 1CSOI 2UVOA 2W0TA 1SGNI 1WGTA 2L7XA 3CXLA 3TO6A 5DAEA 1KBEA 5J8CA 2A20A 1AN1I 1MJ9A 2J9RA 2ORVA 2V1CC 2JYYA 1UVFA 1ULNA 2ARPF 1PPFI 4E1PA 3VDPA 1PTRA 1WGCA 2M5XA 2GVIA 2KCXA 1V1HA 3R5CA 3SGBI 2QQ0A 2V1CA 5CCLA 1BMOA 3RU0A 2RIJA 3FSXA 1V1IA 4UXJA 3UOEA 3OXLA 1HPTA 1ULKA 3UGLA 4FKDA 1K7UA 1M8CA 1H0ZA 2GKVA 5E3RA 5E3QA 2NU2I 2CWHA 1TBNA 5J8FA 3BJIA 1CGII 3TOAA 1SGDI 1TBOA 2NU3I 2RC4A 2CJSC 1R79A 1Z2IA 1VDDA 1MT1A 1X74A 2GKTI 2WCYA 1OMUA 1LR9A 1OVOA 1TGSI 2VRWB 4JCVE 3UGIA
chains in the Genus database with same CATH topology
1TBQR 2SGFI 1N13A 1YTPA 2DIPA 1RFHA 2ROWA 2ELIA 1IY5A 1UUCA 1TIHA 1TURA 2OD1A 1XBTA 1XX6A 3UEYA 2JZMA 3MEKA 3QTLD 2N1AB 3OL0A 1HDLA 1PCEA 2ENZA 1UVGA 3B4VC 1FYBA 2SGEI 1LR7A 4SGBI 1IW4A 2KMRA 5FUYA 2ERWA 1FAQA 3OVOA 2B0UC 2LEOA 5FUVA 5EX0A 4E1RA 4UXIA 2SGPI 2QQDA 3KY9A 1W4RA 3QWPA 5FUXA 2JW6A 1SGEI 2WVJA 4HGUA 3GOXA 3VE5A 1PJUA 1DS3I 2QQCA 5FUWA 3E2IA 2V53A 2JA1A 1PTQA 1SGRI 2OVOA 2FNFX 2QQEA 3SGQI 4L9MA 2F3CI 4UXHA 2DB6A 3UEJA 4A24A 1LR8A 1U5KA 2E5RA 5HQ8A 1X4SA 1TOTA 5JHWC 3SEKC 2BUSA 1SGPI 2YUUA 2KMPA 3UFFA 1IY6A 5EX3A 2L8EA 2N17A 2N71A 2B8TA 3HH2C 2SGQI 2NU4I 1XA6A 3OXGA 3FC3A 3PDNA 2ENNA 1OMTA 1CT2I 1FARA 2ODDA 1YU6C 2YQPA 3D00A 1SGYI 4B6DA 1KBFA 2P6AC 3TJQA 1BUSA 4OVOA 2N52A 2LUYA 4GI3C 3OXFA 3VDUA 2J87A 2GKRI 2UZ3A 1OYVI 1SGQI 1TBRR 1CT4I 1CGJI 1NUBA 3UGDA 1HJAI 2SGDI 2K9HA 2KMQA 1CT0I 2JXDA 1CE3A 2KMOA 1R0RI 1Y8FA 2XRCA 1Y1CA 1W3SA 1CHOI 1Z7KB 2E73A 1DS2I 2QPOA 2NU1I 3E59A 1M8BA 1Y1BA 2ORWA 1TUSA 1KMAA 5CCMA 2NU0I 1CSOI 2W0TA 1SGNI 2L7XA 3CXLA 5DAEA 1KBEA 2A20A 1AN1I 2J9RA 2ORVA 2V1CC 2JYYA 1UVFA 2ARPF 1PPFI 4E1PA 3VDPA 1PTRA 2M5XA 3SGBI 2GVIA 2KCXA 1V1HA 5CCLA 2QQ0A 2V1CA 1BMOA 3RU0A 1V1IA 4UXJA 3OXLA 1HPTA 3UGLA 1H0ZA 4FKDA 1M8CA 2GKVA 2NU2I 1TBNA 3BJIA 1CGII 1SGDI 1TBOA 2NU3I 2CJSC 1R79A 2GKTI 1VDDA 1MT1A 1X74A 2WCYA 5HI7A 1OMUA 1LR9A 1OVOA 1TGSI 2VRWB 4JCVE 3UGIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ORW A;  4B6D A;  1KBF A;  2WVJ A;  1RFH A;  3CXL A;  2ROW A;  2ELI A;  1KBE A;  5FUW A;  3E2I A;  2JA1 A;  1PTQ A;  2ORV A;  2J87 A;  2J9R A;  1XBT A;  2UZ3 A;  2FNF X;  2QQE A;  1XX6 A;  4L9M A;  4UXH A;  2DB6 A;  3UEJ A;  3UEY A;  1PTR A;  2GVI A;  2QQ0 A;  2ENZ A;  3UGD A;  2YUU A;  4UXJ A;  3UFF A;  2VRW B;  3UGL A;  4FKD A;  5FUY A;  1FAQ A;  1TBN A;  2B8T A;  3BJI A;  5FUV A;  1Y8F A;  1TBO A;  1XA6 A;  1R79 A;  4UXI A;  2E73 A;  2QPO A;  3KY9 A;  2ENN A;  1W4R A;  5FUX A;  1FAR A;  3UGI A; 
#chains in the Genus database with same CATH topology
 1TBQ R;  2SGF I;  1N13 A;  1YTP A;  1ULM A;  2DIP A;  2LB7 A;  1RFH A;  1UHA A;  2ROW A;  2ELI A;  1IY5 A;  1UUC A;  1HEV A;  1TIH A;  1TUR A;  2OD1 A;  1XBT A;  1XX6 A;  3UEY A;  2JZM A;  3MEK A;  3QTL D;  2N1A B;  3OL0 A;  1HDL A;  1PCE A;  2ENZ A;  4AML A;  1UVG A;  2X3T A;  3B4V C;  1FYB A;  2SGE I;  2DKV A;  1LR7 A;  4SGB I;  1IW4 A;  2KMR A;  5FUY A;  2ERW A;  1FAQ A;  3OVO A;  3R5B A;  2B0U C;  2LEO A;  5FUV A;  2PQ8 A;  5EX0 A;  4E1R A;  4UXI A;  1FY7 A;  2SGP I;  5HI7 A;  2QQD A;  3KY9 A;  1W4R A;  3QWP A;  5FUX A;  7WGA A;  1NXU A;  2JW6 A;  1SGE I;  2WVJ A;  4HGU A;  3TO9 A;  3GOX A;  3VE5 A;  1P9G A;  1PJU A;  1DS3 I;  2CWF A;  2QQC A;  5FUW A;  3E2I A;  2V53 A;  2JA1 A;  1PTQ A;  2CWG A;  1SGR I;  2OVO A;  1WTJ A;  2FNF X;  2QQE A;  2WGC A;  4L9M A;  2F3C I;  2Y0M A;  2DB6 A;  4UXH A;  3SGQ I;  1S20 A;  1LR8 A;  1U5K A;  2E5R A;  2OZU A;  3UEJ A;  4A24 A;  1X4S A;  2X52 A;  1TOT A;  5HQ8 A;  3SEK C;  3TO7 A;  2BUS A;  5JHW C;  1SGP I;  2YUU A;  2KMP A;  3UFF A;  1IY6 A;  5EX3 A;  2L8E A;  2N17 A;  2N71 A;  3R5D A;  2B8T A;  1WKX A;  2SGQ I;  3HH2 C;  2NU4 I;  1XA6 A;  1MJB A;  3OXG A;  3FC3 A;  3PDN A;  2ENN A;  4DNC A;  1OMT A;  1CT2 I;  1FAR A;  2ODD A;  1YU6 C;  2YQP A;  3D00 A;  1SGY I;  4B6D A;  3FSY A;  1KBF A;  2P6A C;  1P9Z A;  3TJQ A;  1BUS A;  4OVO A;  3QAH A;  2N52 A;  2LUY A;  4GI3 C;  3OXF A;  5E3P A;  3VDU A;  2J87 A;  2GKR I;  2UZ3 A;  1OYV I;  1MJA A;  1SGQ I;  1Q9B A;  1K7T A;  1TBR R;  4WP4 A;  1CT4 I;  1CGJ I;  1NUB A;  3R5A A;  3UGD A;  1HJA I;  2OU2 A;  2SGD I;  2K9H A;  2KMQ A;  3TOB A;  1CT0 I;  2JXD A;  9WGA A;  1CE3 A;  2KMO A;  1R0R I;  1Y8F A;  2XRC A;  1Y1C A;  1K7V A;  1W3S A;  2GIV A;  1CHO I;  1Z7K B;  2E73 A;  1DS2 I;  2QPO A;  2NU1 I;  3E59 A;  1M8B A;  1Y1B A;  2ORW A;  1TUS A;  4MPI A;  5CCM A;  1KMA A;  2NU0 I;  1CSO I;  2UVO A;  2W0T A;  1SGN I;  1WGT A;  2L7X A;  3CXL A;  3TO6 A;  5DAE A;  1KBE A;  5J8C A;  2A20 A;  1AN1 I;  1MJ9 A;  2J9R A;  2ORV A;  2V1C C;  2JYY A;  1UVF A;  1ULN A;  2ARP F;  1PPF I;  4E1P A;  3VDP A;  1PTR A;  1WGC A;  2M5X A;  2GVI A;  2KCX A;  1V1H A;  3R5C A;  3SGB I;  2QQ0 A;  2V1C A;  5CCL A;  1BMO A;  3RU0 A;  2RIJ A;  3FSX A;  1V1I A;  4UXJ A;  3UOE A;  3OXL A;  1HPT A;  1ULK A;  3UGL A;  4FKD A;  1K7U A;  1M8C A;  1H0Z A;  2GKV A;  5E3R A;  5E3Q A;  2NU2 I;  2CWH A;  1TBN A;  5J8F A;  3BJI A;  1CGI I;  3TOA A;  1SGD I;  1TBO A;  2NU3 I;  2RC4 A;  2CJS C;  1R79 A;  1Z2I A;  1VDD A;  1MT1 A;  1X74 A;  2GKT I;  2WCY A;  1OMU A;  1LR9 A;  1OVO A;  1TGS I;  2VRW B;  4JCV E;  3UGI A; 
#chains in the Genus database with same CATH homology
 1TBQ R;  2SGF I;  1N13 A;  1YTP A;  2DIP A;  1RFH A;  2ROW A;  2ELI A;  1IY5 A;  1UUC A;  1TIH A;  1TUR A;  2OD1 A;  1XBT A;  1XX6 A;  3UEY A;  2JZM A;  3MEK A;  3QTL D;  2N1A B;  3OL0 A;  1HDL A;  1PCE A;  2ENZ A;  1UVG A;  3B4V C;  1FYB A;  2SGE I;  1LR7 A;  4SGB I;  1IW4 A;  2KMR A;  5FUY A;  2ERW A;  1FAQ A;  3OVO A;  2B0U C;  2LEO A;  5FUV A;  5EX0 A;  4E1R A;  4UXI A;  2SGP I;  2QQD A;  3KY9 A;  1W4R A;  3QWP A;  5FUX A;  2JW6 A;  1SGE I;  2WVJ A;  4HGU A;  3GOX A;  3VE5 A;  1PJU A;  1DS3 I;  2QQC A;  5FUW A;  3E2I A;  2V53 A;  2JA1 A;  1PTQ A;  1SGR I;  2OVO A;  2FNF X;  2QQE A;  3SGQ I;  4L9M A;  2F3C I;  4UXH A;  2DB6 A;  3UEJ A;  4A24 A;  1LR8 A;  1U5K A;  2E5R A;  5HQ8 A;  1X4S A;  1TOT A;  5JHW C;  3SEK C;  2BUS A;  1SGP I;  2YUU A;  2KMP A;  3UFF A;  1IY6 A;  5EX3 A;  2L8E A;  2N17 A;  2N71 A;  2B8T A;  3HH2 C;  2SGQ I;  2NU4 I;  1XA6 A;  3OXG A;  3FC3 A;  3PDN A;  2ENN A;  1OMT A;  1CT2 I;  1FAR A;  2ODD A;  1YU6 C;  2YQP A;  3D00 A;  1SGY I;  4B6D A;  1KBF A;  2P6A C;  3TJQ A;  1BUS A;  4OVO A;  2N52 A;  2LUY A;  4GI3 C;  3OXF A;  3VDU A;  2J87 A;  2GKR I;  2UZ3 A;  1OYV I;  1SGQ I;  1TBR R;  1CT4 I;  1CGJ I;  1NUB A;  3UGD A;  1HJA I;  2SGD I;  2K9H A;  2KMQ A;  1CT0 I;  2JXD A;  1CE3 A;  2KMO A;  1R0R I;  1Y8F A;  2XRC A;  1Y1C A;  1W3S A;  1CHO I;  1Z7K B;  2E73 A;  1DS2 I;  2QPO A;  2NU1 I;  3E59 A;  1M8B A;  1Y1B A;  2ORW A;  1TUS A;  1KMA A;  5CCM A;  2NU0 I;  1CSO I;  2W0T A;  1SGN I;  2L7X A;  3CXL A;  5DAE A;  1KBE A;  2A20 A;  1AN1 I;  2J9R A;  2ORV A;  2V1C C;  2JYY A;  1UVF A;  2ARP F;  1PPF I;  4E1P A;  3VDP A;  1PTR A;  2M5X A;  3SGB I;  2GVI A;  2KCX A;  1V1H A;  5CCL A;  2QQ0 A;  2V1C A;  1BMO A;  3RU0 A;  1V1I A;  4UXJ A;  3OXL A;  1HPT A;  3UGL A;  1H0Z A;  4FKD A;  1M8C A;  2GKV A;  2NU2 I;  1TBN A;  3BJI A;  1CGI I;  1SGD I;  1TBO A;  2NU3 I;  2CJS C;  1R79 A;  2GKT I;  1VDD A;  1MT1 A;  1X74 A;  2WCY A;  5HI7 A;  1OMU A;  1LR9 A;  1OVO A;  1TGS I;  2VRW B;  4JCV E;  3UGI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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