2K9HA

The hantavirus glycoprotein g1 tail contains a dual cchc-type classical zinc fingers
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
57
structure length
57
Chain Sequence
MGSMVCDVCHHECETAKELESHRQSCINGQCPYCMTITEATESALQAHYSICKLTGR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Glycoprotein
publication title The Hantavirus Glycoprotein G1 Tail Contains Dual CCHC-type Classical Zinc Fingers.
pubmed doi rcsb
source organism Andes virus
molecule tags Metal binding protein
total genus 17
structure length 57
sequence length 57
ec nomenclature
pdb deposition date 2008-10-13
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.150 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2k9hA00
2K9HA 2L7XA
chains in the Genus database with same CATH superfamily
1PPFI 1WGTA 3TO9A 1KMAA 3CXLA 1V1HA 2FNFX 2JYYA 2ORWA 1K7VA 2W0TA 3TO7A 5CCLA 1CSOI 3R5AA 1TURA 1TOTA 1P9GA 2E73A 1OMTA 1WTJA 5EX3A 2KCXA 3VDUA 1FYBA 2KMQA 3TOAA 1CGJI 1TIHA 2RC4A 1SGPI 2UZ3A 3R5DA 1FAQA 1BMOA 1X74A 2GIVA 1WKXA 4A24A 2P6AC 2JA1A 1X4SA 3R5BA 2ELIA 5FUYA 1M8CA 2X3TA 3QWPA 2E5RA 1SGNI 2X52A 1Z7KB 3E2IA 2SGDI 4E1PA 1SGEI 2ODDA 3VDPA 1FY7A 1BUSA 3RU0A 4FKDA 2RIJA 5DAEA 3HH2C 1MJ9A 2SGQI 1SGYI 1SGQI 1XA6A 2XRCA 1VDDA 2WCYA 2QQDA 4JCVE 2V53A 4SGBI 2GKRI 4UXHA 3UEJA 1IW4A 2N1AB 2QQ0A 3FSXA 1U5KA 1TBNA 1Y8FA 1CT0I 1DS2I 4HGUA 7WGAA 3KY9A 3GOXA 1HDLA 1Q9BA 1TGSI 1Z2IA 2NU1I 3BJIA 3OL0A 1PTRA 3OXGA 5FUXA 1P9ZA 2ORVA 1HEVA 1PCEA 1IY5A 5J8FA 1UVGA 2KMOA 2N52A 2B8TA 2M5XA 2OVOA 2NU3I 2Y0MA 1AN1I 2KMPA 4L9MA 1XBTA 1TBRR 2LB7A 1OVOA 1YU6C 1YTPA 1OYVI 3TJQA 2V1CA 2JZMA 3UOEA 3TOBA 5EX0A 1CE3A 2KMRA 2WVJA 1DS3I 1H0ZA 1R79A 2ENZA 1CGII 1FARA 9WGAA 5HQ8A 3FC3A 2ROWA 5HI7A 3UFFA 1PJUA 1K7TA 1ULNA 2QQCA 1LR7A 1LR9A 2SGPI 3D00A 4WP4A 2DIPA 2CWGA 2CWHA 1W3SA 3UGIA 1N13A 1WGCA 2DB6A 2J87A 5E3QA 4E1RA 2GVIA 4AMLA 2A20A 3OVOA 1UHAA 2ERWA 1CT4I 2N71A 2SGEI 1ULMA 2NU2I 3PDNA 4MPIA 2VRWB 5CCMA 3SGBI 2GKVA 1V1IA 2J9RA 5E3RA 4DNCA 2N17A 5FUVA 1CT2I 1R0RI 2CJSC 1S20A 1NUBA 1RFHA 1TUSA 1MT1A 2OU2A 2QPOA 2YQPA 3UGDA 4UXIA 1W4RA 1SGDI 2OZUA 2F3CI 5J8CA 3OXFA 3R5CA 1TBOA 3QTLD 2OD1A 3TO6A 1MJAA 2LUYA 3E59A 2NU0I 5JHWC 1CHOI 1ULKA 1XX6A 1NXUA 1Y1CA 1HJAI 3UGLA 1HPTA 2BUSA 2PQ8A 1K7UA 1OMUA 2SGFI 4GI3C 4OVOA 2V1CC 2CWFA 2ENNA 3FSYA 2LEOA 1KBEA 1UVFA 1IY6A 1Y1BA 1TBQR 2JW6A 4UXJA 5FUWA 4B6DA 1KBFA 1PTQA 2WGCA 1M8BA 3UEYA 1LR8A 1MJBA 2DKVA 3SEKC 3QAHA 2GKTI 2L8EA 2B0UC 2QQEA 2L7XA 2YUUA 2ARPF 2UVOA 2JXDA 3MEKA 3VE5A 5E3PA 2K9HA 1UUCA 2NU4I 3B4VC 3OXLA 1SGRI 3SGQI
chains in the Genus database with same CATH topology
1PPFI 1KMAA 3CXLA 1V1HA 2FNFX 2JYYA 2ORWA 2W0TA 5CCLA 1CSOI 1TURA 1TOTA 2E73A 1OMTA 5EX3A 2KCXA 3VDUA 1FYBA 2KMQA 1CGJI 1TIHA 1SGPI 2UZ3A 1FAQA 1BMOA 1X74A 4A24A 2P6AC 2JA1A 1X4SA 2ELIA 5FUYA 1M8CA 3QWPA 2E5RA 1SGNI 3E2IA 1Z7KB 2SGDI 4E1PA 1SGEI 2ODDA 3VDPA 1BUSA 3RU0A 4FKDA 5DAEA 3HH2C 2SGQI 1SGYI 1SGQI 1XA6A 2XRCA 1VDDA 2WCYA 2QQDA 4JCVE 2V53A 4SGBI 2GKRI 4UXHA 3UEJA 1IW4A 2N1AB 2QQ0A 1U5KA 1TBNA 1Y8FA 1CT0I 1DS2I 4HGUA 1HDLA 3KY9A 3GOXA 1TGSI 2NU1I 3BJIA 3OL0A 3OXGA 1PTRA 5FUXA 2ORVA 1PCEA 1IY5A 1UVGA 2KMOA 2N52A 2B8TA 2M5XA 2OVOA 2NU3I 1AN1I 2KMPA 4L9MA 1XBTA 1TBRR 1OVOA 1YU6C 1YTPA 1OYVI 3TJQA 2V1CA 2JZMA 5EX0A 1CE3A 2KMRA 2WVJA 1DS3I 1H0ZA 1R79A 2ENZA 1CGII 1FARA 5HQ8A 3FC3A 2ROWA 5HI7A 3UFFA 1PJUA 2QQCA 1LR7A 1LR9A 2SGPI 3D00A 2DIPA 1W3SA 3UGIA 1N13A 2DB6A 2J87A 4E1RA 2GVIA 2A20A 3OVOA 2ERWA 1CT4I 2N71A 2SGEI 3PDNA 2NU2I 2VRWB 5CCMA 3SGBI 2GKVA 1V1IA 2J9RA 2N17A 5FUVA 1CT2I 1R0RI 2CJSC 1NUBA 1RFHA 1TUSA 1MT1A 3UGDA 2QPOA 2YQPA 4UXIA 1W4RA 1SGDI 2F3CI 3OXFA 1TBOA 3QTLD 2OD1A 5JHWC 2LUYA 3E59A 2NU0I 1CHOI 1XX6A 1Y1CA 1HJAI 3UGLA 1HPTA 2BUSA 1OMUA 2SGFI 4GI3C 4OVOA 2V1CC 2ENNA 2LEOA 1KBEA 1UVFA 1IY6A 1Y1BA 1TBQR 2JW6A 4UXJA 5FUWA 4B6DA 1KBFA 1PTQA 1M8BA 3UEYA 1LR8A 3SEKC 2GKTI 2L8EA 2B0UC 2QQEA 2L7XA 2YUUA 2ARPF 3MEKA 2JXDA 3VE5A 2K9HA 1UUCA 2NU4I 3B4VC 3OXLA 1SGRI 3SGQI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K9H A;  2L7X A; 
#chains in the Genus database with same CATH topology
 1PPF I;  1WGT A;  3TO9 A;  1KMA A;  3CXL A;  1V1H A;  2FNF X;  2JYY A;  2ORW A;  1K7V A;  2W0T A;  3TO7 A;  5CCL A;  1CSO I;  3R5A A;  1TUR A;  1TOT A;  1P9G A;  2E73 A;  1OMT A;  1WTJ A;  5EX3 A;  2KCX A;  3VDU A;  1FYB A;  2KMQ A;  3TOA A;  1CGJ I;  1TIH A;  2RC4 A;  1SGP I;  2UZ3 A;  3R5D A;  1FAQ A;  1BMO A;  1X74 A;  2GIV A;  1WKX A;  4A24 A;  2P6A C;  2JA1 A;  1X4S A;  3R5B A;  2ELI A;  5FUY A;  1M8C A;  2X3T A;  3QWP A;  2E5R A;  1SGN I;  2X52 A;  1Z7K B;  3E2I A;  2SGD I;  4E1P A;  1SGE I;  2ODD A;  3VDP A;  1FY7 A;  1BUS A;  3RU0 A;  4FKD A;  2RIJ A;  5DAE A;  3HH2 C;  1MJ9 A;  2SGQ I;  1SGY I;  1SGQ I;  1XA6 A;  2XRC A;  1VDD A;  2WCY A;  2QQD A;  4JCV E;  2V53 A;  4SGB I;  2GKR I;  4UXH A;  3UEJ A;  1IW4 A;  2N1A B;  2QQ0 A;  3FSX A;  1U5K A;  1TBN A;  1Y8F A;  1CT0 I;  1DS2 I;  4HGU A;  7WGA A;  3KY9 A;  3GOX A;  1HDL A;  1Q9B A;  1TGS I;  1Z2I A;  2NU1 I;  3BJI A;  3OL0 A;  1PTR A;  3OXG A;  5FUX A;  1P9Z A;  2ORV A;  1HEV A;  1PCE A;  1IY5 A;  5J8F A;  1UVG A;  2KMO A;  2N52 A;  2B8T A;  2M5X A;  2OVO A;  2NU3 I;  2Y0M A;  1AN1 I;  2KMP A;  4L9M A;  1XBT A;  1TBR R;  2LB7 A;  1OVO A;  1YU6 C;  1YTP A;  1OYV I;  3TJQ A;  2V1C A;  2JZM A;  3UOE A;  3TOB A;  5EX0 A;  1CE3 A;  2KMR A;  2WVJ A;  1DS3 I;  1H0Z A;  1R79 A;  2ENZ A;  1CGI I;  1FAR A;  9WGA A;  5HQ8 A;  3FC3 A;  2ROW A;  5HI7 A;  3UFF A;  1PJU A;  1K7T A;  1ULN A;  2QQC A;  1LR7 A;  1LR9 A;  2SGP I;  3D00 A;  4WP4 A;  2DIP A;  2CWG A;  2CWH A;  1W3S A;  3UGI A;  1N13 A;  1WGC A;  2DB6 A;  2J87 A;  5E3Q A;  4E1R A;  2GVI A;  4AML A;  2A20 A;  3OVO A;  1UHA A;  2ERW A;  1CT4 I;  2N71 A;  2SGE I;  1ULM A;  2NU2 I;  3PDN A;  4MPI A;  2VRW B;  5CCM A;  3SGB I;  2GKV A;  1V1I A;  2J9R A;  5E3R A;  4DNC A;  2N17 A;  5FUV A;  1CT2 I;  1R0R I;  2CJS C;  1S20 A;  1NUB A;  1RFH A;  1TUS A;  1MT1 A;  2OU2 A;  2QPO A;  2YQP A;  3UGD A;  4UXI A;  1W4R A;  1SGD I;  2OZU A;  2F3C I;  5J8C A;  3OXF A;  3R5C A;  1TBO A;  3QTL D;  2OD1 A;  3TO6 A;  1MJA A;  2LUY A;  3E59 A;  2NU0 I;  5JHW C;  1CHO I;  1ULK A;  1XX6 A;  1NXU A;  1Y1C A;  1HJA I;  3UGL A;  1HPT A;  2BUS A;  2PQ8 A;  1K7U A;  1OMU A;  2SGF I;  4GI3 C;  4OVO A;  2V1C C;  2CWF A;  2ENN A;  3FSY A;  2LEO A;  1KBE A;  1UVF A;  1IY6 A;  1Y1B A;  1TBQ R;  2JW6 A;  4UXJ A;  5FUW A;  4B6D A;  1KBF A;  1PTQ A;  2WGC A;  1M8B A;  3UEY A;  1LR8 A;  1MJB A;  2DKV A;  3SEK C;  3QAH A;  2GKT I;  2L8E A;  2B0U C;  2QQE A;  2L7X A;  2YUU A;  2ARP F;  2UVO A;  2JXD A;  3MEK A;  3VE5 A;  5E3P A;  2K9H A;  1UUC A;  2NU4 I;  3B4V C;  3OXL A;  1SGR I;  3SGQ I; 
#chains in the Genus database with same CATH homology
 1PPF I;  1KMA A;  3CXL A;  1V1H A;  2FNF X;  2JYY A;  2ORW A;  2W0T A;  5CCL A;  1CSO I;  1TUR A;  1TOT A;  2E73 A;  1OMT A;  5EX3 A;  2KCX A;  3VDU A;  1FYB A;  2KMQ A;  1CGJ I;  1TIH A;  1SGP I;  2UZ3 A;  1FAQ A;  1BMO A;  1X74 A;  4A24 A;  2P6A C;  2JA1 A;  1X4S A;  2ELI A;  5FUY A;  1M8C A;  3QWP A;  2E5R A;  1SGN I;  3E2I A;  1Z7K B;  2SGD I;  4E1P A;  1SGE I;  2ODD A;  3VDP A;  1BUS A;  3RU0 A;  4FKD A;  5DAE A;  3HH2 C;  2SGQ I;  1SGY I;  1SGQ I;  1XA6 A;  2XRC A;  1VDD A;  2WCY A;  2QQD A;  4JCV E;  2V53 A;  4SGB I;  2GKR I;  4UXH A;  3UEJ A;  1IW4 A;  2N1A B;  2QQ0 A;  1U5K A;  1TBN A;  1Y8F A;  1CT0 I;  1DS2 I;  4HGU A;  1HDL A;  3KY9 A;  3GOX A;  1TGS I;  2NU1 I;  3BJI A;  3OL0 A;  3OXG A;  1PTR A;  5FUX A;  2ORV A;  1PCE A;  1IY5 A;  1UVG A;  2KMO A;  2N52 A;  2B8T A;  2M5X A;  2OVO A;  2NU3 I;  1AN1 I;  2KMP A;  4L9M A;  1XBT A;  1TBR R;  1OVO A;  1YU6 C;  1YTP A;  1OYV I;  3TJQ A;  2V1C A;  2JZM A;  5EX0 A;  1CE3 A;  2KMR A;  2WVJ A;  1DS3 I;  1H0Z A;  1R79 A;  2ENZ A;  1CGI I;  1FAR A;  5HQ8 A;  3FC3 A;  2ROW A;  5HI7 A;  3UFF A;  1PJU A;  2QQC A;  1LR7 A;  1LR9 A;  2SGP I;  3D00 A;  2DIP A;  1W3S A;  3UGI A;  1N13 A;  2DB6 A;  2J87 A;  4E1R A;  2GVI A;  2A20 A;  3OVO A;  2ERW A;  1CT4 I;  2N71 A;  2SGE I;  3PDN A;  2NU2 I;  2VRW B;  5CCM A;  3SGB I;  2GKV A;  1V1I A;  2J9R A;  2N17 A;  5FUV A;  1CT2 I;  1R0R I;  2CJS C;  1NUB A;  1RFH A;  1TUS A;  1MT1 A;  3UGD A;  2QPO A;  2YQP A;  4UXI A;  1W4R A;  1SGD I;  2F3C I;  3OXF A;  1TBO A;  3QTL D;  2OD1 A;  5JHW C;  2LUY A;  3E59 A;  2NU0 I;  1CHO I;  1XX6 A;  1Y1C A;  1HJA I;  3UGL A;  1HPT A;  2BUS A;  1OMU A;  2SGF I;  4GI3 C;  4OVO A;  2V1C C;  2ENN A;  2LEO A;  1KBE A;  1UVF A;  1IY6 A;  1Y1B A;  1TBQ R;  2JW6 A;  4UXJ A;  5FUW A;  4B6D A;  1KBF A;  1PTQ A;  1M8B A;  3UEY A;  1LR8 A;  3SEK C;  2GKT I;  2L8E A;  2B0U C;  2QQE A;  2L7X A;  2YUU A;  2ARP F;  3MEK A;  2JXD A;  3VE5 A;  2K9H A;  1UUC A;  2NU4 I;  3B4V C;  3OXL A;  1SGR I;  3SGQ I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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