1SGEI

Glu 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b at ph 6.5
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTEEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
source organism Meleagris gallopavo
publication title Recruitment of a Buried K+ Ion to Stabilize the Negative Charge of Ionized P1 in the Hydrophobic Pocket: Crystal Structures of Glu18, Gln18, Asp18 and Asn18 Variants of Turkey Ovomucoid Inhibitor Third Domain Complexed with Streptomyces griseus Protease B at Various pHs
rcsb
molecule keywords Streptogrisin B
total genus 13
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1999-03-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgeI00
2GKRI 1IY5A 1DS2I 1OMUA 2KMQA 3QTLD 2N17A 2F3CI 2JYYA 2JZMA 1TURA 2SGQI 2KMRA 4HGUA 3HH2C 1Y1BA 3TJQA 2B0UC 1CT4I 1TBQR 2KMPA 1HDLA 1Y1CA 2N52A 2XRCA 2LEOA 2NU2I 2ARPF 1MT1A 2NU1I 2QQCA 1CT0I 1YU6C 1LR9A 2SGPI 1M8CA 1SGQI 1LR7A 1OMTA 1HPTA 1PCEA 2QQDA 2SGEI 1UUCA 1SGDI 4SGBI 1SGPI 1BUSA 1IY6A 2SGDI 1OYVI 2SGFI 2OVOA 1CGJI 1IW4A 1LR8A 1UVFA 3B4VC 1FYBA 5DAEA 1SGYI 1Z7KB 1SGRI 2M5XA 2N71A 2V53A 1OVOA 2KCXA 3SEKC 1TGSI 2P6AC 1TBRR 1DS3I 1AN1I 1NUBA 2BUSA 1H0ZA 2GKVA 1CSOI 2KMOA 1HJAI 3SGQI 1CGII 5JHWC 1SGEI 1YTPA 2NU4I 1PPFI 1KMAA 1CHOI 4GI3C 1SGNI 2GKTI 1N13A 1UVGA 1TUSA 1CE3A 3SGBI 1M8BA 2JXDA 3OVOA 2NU0I 1R0RI 2ERWA 2WCYA 1CT2I 2NU3I 1PJUA 4OVOA 1TIHA 1BMOA
chains in the Genus database with same CATH superfamily
1WTJA 2GKRI 2Y0MA 4UXIA 2L7XA 1TBNA 1V1IA 4E1PA 1IY5A 2ENZA 2ENNA 1X74A 2QQ0A 5FUWA 5J8CA 1DS2I 2RIJA 1OMUA 1ULKA 2ORVA 2OZUA 2LB7A 1P9GA 2KMQA 3QTLD 2N17A 5E3PA 2F3CI 2WVJA 2UZ3A 2JYYA 2JZMA 2OD1A 1TURA 2SGQI 2KMRA 3TO7A 4HGUA 1FARA 3FSXA 3OXFA 3HH2C 3OL0A 1Y1BA 2PQ8A 3TJQA 1NXUA 3UFFA 2X3TA 1R79A 2B0UC 1CT4I 1TBQR 2KMPA 3CXLA 3D00A 3GOXA 3R5AA 3MEKA 1K7TA 5FUVA 1HDLA 3QWPA 4JCVE 1Y1CA 2N52A 1FY7A 3QAHA 4A24A 2JA1A 2LEOA 2LUYA 2XRCA 5FUYA 2NU2I 2ARPF 1MT1A 2NU1I 1MJ9A 3UGDA 2QQCA 1CT0I 3FSYA 1XBTA 2E5RA 2CWGA 1YU6C 3R5DA 2J87A 1LR9A 2N1AB 2SGPI 1M8CA 1SGQI 3VDUA 1LR7A 1OMTA 2ELIA 1HPTA 1PCEA 2QQDA 2SGEI 2VRWB 2WGCA 1UUCA 3E59A 1XA6A 2L8EA 1SGDI 2V1CC 4SGBI 1SGPI 2GVIA 3R5BA 9WGAA 1BUSA 1IY6A 2CWHA 2DIPA 2SGDI 1OYVI 1HEVA 1Z2IA 4E1RA 1UHAA 2SGFI 2UVOA 2OVOA 1CGJI 1IW4A 2CWFA 1PTRA 1MJBA 3TO6A 4MPIA 1LR8A 1X4SA 3OXLA 3TOAA 1ULMA 1UVFA 3B4VC 1MJAA 5CCLA 5FUXA 2K9HA 1PTQA 2J9RA 2QQEA 1FYBA 5DAEA 1S20A 5CCMA 3PDNA 1SGYI 1Z7KB 4AMLA 5E3RA 3TO9A 1SGRI 2ORWA 2M5XA 4FKDA 2N71A 2V53A 2DB6A 1RFHA 1OVOA 1VDDA 2KCXA 2ODDA 3SEKC 1TGSI 1K7UA 3BJIA 2P6AC 1TBRR 1DS3I 1AN1I 1NUBA 2FNFX 3VDPA 5J8FA 1V1HA 3UGLA 2BUSA 4UXJA 1WKXA 1H0ZA 2QPOA 3VE5A 5HQ8A 3R5CA 2JW6A 2GKVA 3KY9A 1CSOI 1HJAI 2KMOA 3SGQI 1CGII 2YQPA 5JHWC 1SGEI 1YTPA 1TBOA 2GIVA 2NU4I 2RC4A 1PPFI 2ROWA 3E2IA 1KMAA 1XX6A 3UOEA 1CHOI 3OXGA 4GI3C 3UEJA 7WGAA 1P9ZA 1WGCA 1SGNI 1KBEA 5EX3A 3RU0A 1TOTA 2GKTI 2OU2A 1W4RA 2A20A 4DNCA 1KBFA 1ULNA 2X52A 1N13A 1UVGA 2CJSC 3UGIA 4B6DA 1TUSA 1CE3A 3SGBI 1M8BA 2E73A 1Q9BA 1FAQA 5E3QA 2DKVA 2JXDA 2W0TA 3OVOA 2YUUA 4UXHA 1U5KA 2NU0I 3UEYA 1R0RI 1K7VA 3FC3A 4WP4A 2B8TA 1WGTA 2ERWA 2WCYA 3TOBA 4L9MA 1CT2I 1Y8FA 2NU3I 1PJUA 4OVOA 1TIHA 5EX0A 5HI7A 1BMOA 1W3SA 2V1CA
chains in the Genus database with same CATH topology
2GKRI 4UXIA 2L7XA 1TBNA 1V1IA 4E1PA 1IY5A 2ENZA 2ENNA 1X74A 2QQ0A 5FUWA 1DS2I 1OMUA 2ORVA 2KMQA 3QTLD 2N17A 2F3CI 2WVJA 2UZ3A 2JYYA 2JZMA 2OD1A 1TURA 2SGQI 2KMRA 4HGUA 1FARA 3OXFA 3HH2C 3OL0A 1Y1BA 3TJQA 3UFFA 1R79A 2B0UC 1CT4I 1TBQR 2KMPA 3CXLA 3D00A 3GOXA 3MEKA 5FUVA 1HDLA 3QWPA 4JCVE 1Y1CA 2N52A 4A24A 2JA1A 2LEOA 2LUYA 2XRCA 5FUYA 2NU2I 2ARPF 1MT1A 2NU1I 3UGDA 2QQCA 1CT0I 1XBTA 2E5RA 1YU6C 2J87A 1LR9A 2N1AB 2SGPI 1M8CA 1SGQI 3VDUA 1LR7A 1OMTA 2ELIA 1HPTA 1PCEA 2QQDA 2SGEI 2VRWB 3E59A 1UUCA 1XA6A 2L8EA 1SGDI 2V1CC 4SGBI 1SGPI 2GVIA 1BUSA 1IY6A 2DIPA 2SGDI 1OYVI 4E1RA 2SGFI 2OVOA 1CGJI 1IW4A 1PTRA 1LR8A 1X4SA 3OXLA 5CCLA 1UVFA 3B4VC 5FUXA 2K9HA 1PTQA 2J9RA 2QQEA 1FYBA 5DAEA 5CCMA 3PDNA 1SGYI 1Z7KB 1SGRI 2ORWA 2M5XA 4FKDA 2N71A 2V53A 2DB6A 1RFHA 1OVOA 1VDDA 2KCXA 2ODDA 3SEKC 1TGSI 3BJIA 2P6AC 1TBRR 1DS3I 1AN1I 1NUBA 2FNFX 3VDPA 1V1HA 3UGLA 2BUSA 4UXJA 1H0ZA 2QPOA 3VE5A 5HQ8A 2JW6A 2GKVA 3KY9A 1CSOI 1HJAI 2KMOA 3SGQI 1CGII 2YQPA 5JHWC 1SGEI 1YTPA 1TBOA 2ROWA 2NU4I 1PPFI 3E2IA 1KMAA 1XX6A 1CHOI 3OXGA 4GI3C 3UEJA 3RU0A 1SGNI 1KBEA 5EX3A 1TOTA 2GKTI 1W4RA 2A20A 1KBFA 1N13A 1UVGA 2CJSC 3UGIA 4B6DA 1TUSA 1CE3A 3SGBI 1M8BA 2E73A 1FAQA 2JXDA 2W0TA 3OVOA 2YUUA 4UXHA 1U5KA 2NU0I 3UEYA 1R0RI 3FC3A 2B8TA 2ERWA 2WCYA 4L9MA 1CT2I 1Y8FA 2NU3I 1PJUA 4OVOA 1TIHA 5EX0A 5HI7A 1BMOA 1W3SA 2V1CA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GKR I;  1IY5 A;  1DS2 I;  1OMU A;  2KMQ A;  3QTL D;  2N17 A;  2F3C I;  2JYY A;  2JZM A;  1TUR A;  2SGQ I;  2KMR A;  4HGU A;  3HH2 C;  1Y1B A;  3TJQ A;  2B0U C;  1CT4 I;  1TBQ R;  2KMP A;  1HDL A;  1Y1C A;  2N52 A;  2XRC A;  2LEO A;  2NU2 I;  2ARP F;  1MT1 A;  2NU1 I;  2QQC A;  1CT0 I;  1YU6 C;  1LR9 A;  2SGP I;  1M8C A;  1SGQ I;  1LR7 A;  1OMT A;  1HPT A;  1PCE A;  2QQD A;  2SGE I;  1UUC A;  1SGD I;  4SGB I;  1SGP I;  1BUS A;  1IY6 A;  2SGD I;  1OYV I;  2SGF I;  2OVO A;  1CGJ I;  1IW4 A;  1LR8 A;  1UVF A;  3B4V C;  1FYB A;  5DAE A;  1SGY I;  1Z7K B;  1SGR I;  2M5X A;  2N71 A;  2V53 A;  1OVO A;  2KCX A;  3SEK C;  1TGS I;  2P6A C;  1TBR R;  1DS3 I;  1AN1 I;  1NUB A;  2BUS A;  1H0Z A;  2GKV A;  1CSO I;  2KMO A;  1HJA I;  3SGQ I;  1CGI I;  5JHW C;  1SGE I;  1YTP A;  2NU4 I;  1PPF I;  1KMA A;  1CHO I;  4GI3 C;  1SGN I;  2GKT I;  1N13 A;  1UVG A;  1TUS A;  1CE3 A;  3SGB I;  1M8B A;  2JXD A;  3OVO A;  2NU0 I;  1R0R I;  2ERW A;  2WCY A;  1CT2 I;  2NU3 I;  1PJU A;  4OVO A;  1TIH A;  1BMO A; 
#chains in the Genus database with same CATH topology
 1WTJ A;  2GKR I;  2Y0M A;  4UXI A;  2L7X A;  1TBN A;  1V1I A;  4E1P A;  1IY5 A;  2ENZ A;  2ENN A;  1X74 A;  2QQ0 A;  5FUW A;  5J8C A;  1DS2 I;  2RIJ A;  1OMU A;  1ULK A;  2ORV A;  2OZU A;  2LB7 A;  1P9G A;  2KMQ A;  3QTL D;  2N17 A;  5E3P A;  2F3C I;  2WVJ A;  2UZ3 A;  2JYY A;  2JZM A;  2OD1 A;  1TUR A;  2SGQ I;  2KMR A;  3TO7 A;  4HGU A;  1FAR A;  3FSX A;  3OXF A;  3HH2 C;  3OL0 A;  1Y1B A;  2PQ8 A;  3TJQ A;  1NXU A;  3UFF A;  2X3T A;  1R79 A;  2B0U C;  1CT4 I;  1TBQ R;  2KMP A;  3CXL A;  3D00 A;  3GOX A;  3R5A A;  3MEK A;  1K7T A;  5FUV A;  1HDL A;  3QWP A;  4JCV E;  1Y1C A;  2N52 A;  1FY7 A;  3QAH A;  4A24 A;  2JA1 A;  2LEO A;  2LUY A;  2XRC A;  5FUY A;  2NU2 I;  2ARP F;  1MT1 A;  2NU1 I;  1MJ9 A;  3UGD A;  2QQC A;  1CT0 I;  3FSY A;  1XBT A;  2E5R A;  2CWG A;  1YU6 C;  3R5D A;  2J87 A;  1LR9 A;  2N1A B;  2SGP I;  1M8C A;  1SGQ I;  3VDU A;  1LR7 A;  1OMT A;  2ELI A;  1HPT A;  1PCE A;  2QQD A;  2SGE I;  2VRW B;  2WGC A;  1UUC A;  3E59 A;  1XA6 A;  2L8E A;  1SGD I;  2V1C C;  4SGB I;  1SGP I;  2GVI A;  3R5B A;  9WGA A;  1BUS A;  1IY6 A;  2CWH A;  2DIP A;  2SGD I;  1OYV I;  1HEV A;  1Z2I A;  4E1R A;  1UHA A;  2SGF I;  2UVO A;  2OVO A;  1CGJ I;  1IW4 A;  2CWF A;  1PTR A;  1MJB A;  3TO6 A;  4MPI A;  1LR8 A;  1X4S A;  3OXL A;  3TOA A;  1ULM A;  1UVF A;  3B4V C;  1MJA A;  5CCL A;  5FUX A;  2K9H A;  1PTQ A;  2J9R A;  2QQE A;  1FYB A;  5DAE A;  1S20 A;  5CCM A;  3PDN A;  1SGY I;  1Z7K B;  4AML A;  5E3R A;  3TO9 A;  1SGR I;  2ORW A;  2M5X A;  4FKD A;  2N71 A;  2V53 A;  2DB6 A;  1RFH A;  1OVO A;  1VDD A;  2KCX A;  2ODD A;  3SEK C;  1TGS I;  1K7U A;  3BJI A;  2P6A C;  1TBR R;  1DS3 I;  1AN1 I;  1NUB A;  2FNF X;  3VDP A;  5J8F A;  1V1H A;  3UGL A;  2BUS A;  4UXJ A;  1WKX A;  1H0Z A;  2QPO A;  3VE5 A;  5HQ8 A;  3R5C A;  2JW6 A;  2GKV A;  3KY9 A;  1CSO I;  1HJA I;  2KMO A;  3SGQ I;  1CGI I;  2YQP A;  5JHW C;  1SGE I;  1YTP A;  1TBO A;  2GIV A;  2NU4 I;  2RC4 A;  1PPF I;  2ROW A;  3E2I A;  1KMA A;  1XX6 A;  3UOE A;  1CHO I;  3OXG A;  4GI3 C;  3UEJ A;  7WGA A;  1P9Z A;  1WGC A;  1SGN I;  1KBE A;  5EX3 A;  3RU0 A;  1TOT A;  2GKT I;  2OU2 A;  1W4R A;  2A20 A;  4DNC A;  1KBF A;  1ULN A;  2X52 A;  1N13 A;  1UVG A;  2CJS C;  3UGI A;  4B6D A;  1TUS A;  1CE3 A;  3SGB I;  1M8B A;  2E73 A;  1Q9B A;  1FAQ A;  5E3Q A;  2DKV A;  2JXD A;  2W0T A;  3OVO A;  2YUU A;  4UXH A;  1U5K A;  2NU0 I;  3UEY A;  1R0R I;  1K7V A;  3FC3 A;  4WP4 A;  2B8T A;  1WGT A;  2ERW A;  2WCY A;  3TOB A;  4L9M A;  1CT2 I;  1Y8F A;  2NU3 I;  1PJU A;  4OVO A;  1TIH A;  5EX0 A;  5HI7 A;  1BMO A;  1W3S A;  2V1C A; 
#chains in the Genus database with same CATH homology
 2GKR I;  4UXI A;  2L7X A;  1TBN A;  1V1I A;  4E1P A;  1IY5 A;  2ENZ A;  2ENN A;  1X74 A;  2QQ0 A;  5FUW A;  1DS2 I;  1OMU A;  2ORV A;  2KMQ A;  3QTL D;  2N17 A;  2F3C I;  2WVJ A;  2UZ3 A;  2JYY A;  2JZM A;  2OD1 A;  1TUR A;  2SGQ I;  2KMR A;  4HGU A;  1FAR A;  3OXF A;  3HH2 C;  3OL0 A;  1Y1B A;  3TJQ A;  3UFF A;  1R79 A;  2B0U C;  1CT4 I;  1TBQ R;  2KMP A;  3CXL A;  3D00 A;  3GOX A;  3MEK A;  5FUV A;  1HDL A;  3QWP A;  4JCV E;  1Y1C A;  2N52 A;  4A24 A;  2JA1 A;  2LEO A;  2LUY A;  2XRC A;  5FUY A;  2NU2 I;  2ARP F;  1MT1 A;  2NU1 I;  3UGD A;  2QQC A;  1CT0 I;  1XBT A;  2E5R A;  1YU6 C;  2J87 A;  1LR9 A;  2N1A B;  2SGP I;  1M8C A;  1SGQ I;  3VDU A;  1LR7 A;  1OMT A;  2ELI A;  1HPT A;  1PCE A;  2QQD A;  2SGE I;  2VRW B;  3E59 A;  1UUC A;  1XA6 A;  2L8E A;  1SGD I;  2V1C C;  4SGB I;  1SGP I;  2GVI A;  1BUS A;  1IY6 A;  2DIP A;  2SGD I;  1OYV I;  4E1R A;  2SGF I;  2OVO A;  1CGJ I;  1IW4 A;  1PTR A;  1LR8 A;  1X4S A;  3OXL A;  5CCL A;  1UVF A;  3B4V C;  5FUX A;  2K9H A;  1PTQ A;  2J9R A;  2QQE A;  1FYB A;  5DAE A;  5CCM A;  3PDN A;  1SGY I;  1Z7K B;  1SGR I;  2ORW A;  2M5X A;  4FKD A;  2N71 A;  2V53 A;  2DB6 A;  1RFH A;  1OVO A;  1VDD A;  2KCX A;  2ODD A;  3SEK C;  1TGS I;  3BJI A;  2P6A C;  1TBR R;  1DS3 I;  1AN1 I;  1NUB A;  2FNF X;  3VDP A;  1V1H A;  3UGL A;  2BUS A;  4UXJ A;  1H0Z A;  2QPO A;  3VE5 A;  5HQ8 A;  2JW6 A;  2GKV A;  3KY9 A;  1CSO I;  1HJA I;  2KMO A;  3SGQ I;  1CGI I;  2YQP A;  5JHW C;  1SGE I;  1YTP A;  1TBO A;  2ROW A;  2NU4 I;  1PPF I;  3E2I A;  1KMA A;  1XX6 A;  1CHO I;  3OXG A;  4GI3 C;  3UEJ A;  3RU0 A;  1SGN I;  1KBE A;  5EX3 A;  1TOT A;  2GKT I;  1W4R A;  2A20 A;  1KBF A;  1N13 A;  1UVG A;  2CJS C;  3UGI A;  4B6D A;  1TUS A;  1CE3 A;  3SGB I;  1M8B A;  2E73 A;  1FAQ A;  2JXD A;  2W0T A;  3OVO A;  2YUU A;  4UXH A;  1U5K A;  2NU0 I;  3UEY A;  1R0R I;  3FC3 A;  2B8T A;  2ERW A;  2WCY A;  4L9M A;  1CT2 I;  1Y8F A;  2NU3 I;  1PJU A;  4OVO A;  1TIH A;  5EX0 A;  5HI7 A;  1BMO A;  1W3S A;  2V1C A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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