1SGEI

Glu 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b at ph 6.5
Total Genus 13
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTEEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Streptogrisin B
publication title Recruitment of a Buried K+ Ion to Stabilize the Negative Charge of Ionized P1 in the Hydrophobic Pocket: Crystal Structures of Glu18, Gln18, Asp18 and Asn18 Variants of Turkey Ovomucoid Inhibitor Third Domain Complexed with Streptomyces griseus Protease B at Various pHs
rcsb
source organism Meleagris gallopavo
total genus 13
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1999-03-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgeI00
1HPTA 1SGEI 1PPFI 1M8BA 2SGEI 1TURA 2NU0I 2N17A 1KMAA 2NU2I 2WCYA 2JXDA 1CT2I 3SGQI 1Y1BA 1HDLA 1YTPA 1IY6A 1IY5A 2GKTI 2KMOA 1NUBA 2B0UC 1R0RI 1Z7KB 2NU1I 2BUSA 5DAEA 2GKVA 1OMUA 2M5XA 2N52A 2NU4I 1FYBA 1CGJI 1TUSA 1DS3I 1BMOA 2OVOA 3B4VC 1CHOI 1SGDI 2KCXA 2SGFI 1TBRR 2QQDA 1IW4A 2KMRA 1TBQR 2QQCA 1MT1A 1LR7A 1SGRI 1PJUA 1HJAI 4HGUA 1CGII 2XRCA 3QTLD 2NU3I 2P6AC 2LEOA 1CT0I 1AN1I 1SGYI 1SGPI 1H0ZA 1TIHA 1Y1CA 1YU6C 3OVOA 2ARPF 1SGQI 4GI3C 2JYYA 1CSOI 2SGDI 1TGSI 1N13A 3SEKC 1LR9A 1CE3A 2V53A 2GKRI 1UVFA 2KMPA 1SGNI 2SGPI 2JZMA 1DS2I 4OVOA 2SGQI 1M8CA 1UUCA 2N71A 3HH2C 3TJQA 1OMTA 1OYVI 4SGBI 2F3CI 1PCEA 3SGBI 2KMQA 1CT4I 5JHWC 1LR8A 1BUSA 2ERWA 1OVOA 1UVGA
chains in the Genus database with same CATH superfamily
1HPTA 3UGLA 1SGEI 1XX6A 1PPFI 1M8BA 1WGCA 1TURA 2SGEI 3UEJA 3R5CA 5EX3A 5FUXA 2DB6A 1ULNA 1K7TA 2N17A 2NU0I 2QQ0A 1Q9BA 3CXLA 2OZUA 1MJ9A 2N1AB 1KMAA 3MEKA 2NU2I 2UVOA 1RFHA 2WCYA 1UHAA 1VDDA 2JXDA 2ORVA 2WVJA 1CT2I 3VDUA 3SGQI 1KBFA 1PTQA 1Y1BA 1HDLA 1YTPA 1IY6A 1IY5A 2GKTI 2JW6A 2KMOA 1NUBA 1P9GA 2B0UC 2ENZA 3FSYA 1R0RI 1FAQA 2ENNA 4E1PA 1Z7KB 2NU1I 4A24A 7WGAA 2BUSA 2ELIA 2GIVA 2ORWA 1WKXA 5FUYA 2V1CA 2L7XA 5DAEA 3GOXA 1ULMA 1OMUA 2GKVA 1X4SA 2YQPA 2M5XA 1W4RA 2CJSC 4FKDA 2RC4A 2N52A 1FARA 4B6DA 2NU4I 1FYBA 1CGJI 1TUSA 3SGBI 2A20A 2L8EA 4AMLA 3TOAA 1DS3I 1BMOA 5J8CA 2OVOA 3B4VC 4UXHA 1CHOI 1SGDI 1X74A 2KCXA 2SGFI 3BJIA 1TBRR 2QQDA 1IW4A 4DNCA 2UZ3A 2KMRA 1TBQR 2X52A 2QQCA 2VRWB 2FNFX 1S20A 1W3SA 1MT1A 2ROWA 5CCLA 2RIJA 2X3TA 1LR7A 5E3PA 5E3QA 1SGRI 1PJUA 1HJAI 2GVIA 1R79A 2B8TA 3UEYA 4HGUA 3VE5A 3OL0A 1CGII 5HQ8A 1K7VA 2JA1A 2XRCA 5E3RA 3QTLD 3TO7A 4E1RA 5CCMA 5J8FA 4UXIA 1V1IA 2NU3I 3UFFA 1MJAA 9WGAA 2P6AC 2QQEA 2LEOA 3R5AA 2E73A 1CT0I 3OXGA 5HI7A 2CWHA 3TO6A 1AN1I 1SGYI 2CWFA 1SGPI 4MPIA 4UXJA 3UGIA 1H0ZA 1TIHA 3PDNA 1V1HA 1Y1CA 1YU6C 1P9ZA 2ARPF 1SGQI 2OD1A 2OU2A 2JYYA 2QPOA 1CSOI 1XA6A 2LUYA 1FY7A 1TGSI 1N13A 2K9HA 2SGDI 3SEKC 1LR9A 2J87A 1TBOA 3E59A 3FSXA 3QAHA 5FUWA 2V53A 2GKRI 1CE3A 3QWPA 1UVFA 2ODDA 1TBNA 1XBTA 2CWGA 2KMPA 5EX0A 1Y8FA 3R5BA 1KBEA 3UOEA 3KY9A 2V1CC 2DKVA 1MJBA 1WTJA 3UGDA 2WGCA 2J9RA 1SGNI 1U5KA 3RU0A 3R5DA 3FC3A 2SGPI 3OVOA 2JZMA 3TOBA 1DS2I 4OVOA 2SGQI 1M8CA 1UUCA 4L9MA 1ULKA 2N71A 2YUUA 1NXUA 2Y0MA 3HH2C 3TJQA 1OMTA 3TO9A 2DIPA 3VDPA 1OYVI 4SGBI 1TOTA 2E5RA 2F3CI 1PCEA 2PQ8A 1Z2IA 3E2IA 2KMQA 3OXFA 3OXLA 2LB7A 1K7UA 1CT4I 1WGTA 1PTRA 2W0TA 4GI3C 4JCVE 1LR8A 4WP4A 2ERWA 1OVOA 5FUVA 5JHWC 1BUSA 1UVGA 1HEVA 3D00A
chains in the Genus database with same CATH topology
1HPTA 3UGLA 1SGEI 1XX6A 1PPFI 1M8BA 2SGEI 1TURA 3UEJA 5EX3A 5FUXA 2DB6A 2NU0I 2N17A 2QQ0A 3CXLA 2N1AB 1KMAA 3MEKA 2NU2I 2WCYA 1RFHA 1VDDA 2JXDA 2ORVA 2WVJA 1CT2I 3VDUA 3SGQI 1KBFA 1PTQA 1Y1BA 1HDLA 1YTPA 1IY6A 1IY5A 2GKTI 2JW6A 2KMOA 1NUBA 2B0UC 2ENZA 1R0RI 1FAQA 2ENNA 4E1PA 1Z7KB 2NU1I 4A24A 2BUSA 2ELIA 2ORWA 5FUYA 2V1CA 2L7XA 5DAEA 3GOXA 2GKVA 1OMUA 1X4SA 2YQPA 2M5XA 1W4RA 2CJSC 4FKDA 2N52A 1FARA 4B6DA 2NU4I 1FYBA 1CGJI 1TUSA 2A20A 2L8EA 1DS3I 1BMOA 2OVOA 3B4VC 4UXHA 1CHOI 1SGDI 1X74A 2KCXA 2SGFI 3BJIA 1TBRR 2QQDA 1IW4A 2UZ3A 2KMRA 1TBQR 2QQCA 2VRWB 2FNFX 1W3SA 1MT1A 2ROWA 5CCLA 1LR7A 1SGRI 1PJUA 1HJAI 2GVIA 1R79A 2B8TA 3UEYA 4HGUA 3VE5A 3OL0A 1CGII 5HQ8A 2JA1A 2XRCA 3QTLD 4E1RA 5CCMA 4UXIA 1V1IA 2NU3I 3UFFA 2P6AC 2QQEA 2LEOA 2E73A 1CT0I 3OXGA 1AN1I 1SGYI 1SGPI 4UXJA 3UGIA 1H0ZA 1TIHA 3PDNA 1V1HA 1Y1CA 1YU6C 2ARPF 3OVOA 1SGQI 2OD1A 4GI3C 2JYYA 2QPOA 1CSOI 1XA6A 2LUYA 2SGDI 1TGSI 1N13A 2K9HA 3SEKC 1LR9A 2J87A 1TBOA 3E59A 5FUWA 1CE3A 2V53A 2GKRI 3QWPA 1UVFA 2ODDA 1TBNA 1XBTA 2KMPA 5EX0A 1Y8FA 1KBEA 3KY9A 2V1CC 3UGDA 2J9RA 1SGNI 1U5KA 3RU0A 3FC3A 2SGPI 2JZMA 1DS2I 4OVOA 2SGQI 1M8CA 1UUCA 4L9MA 2N71A 2YUUA 3HH2C 3TJQA 1OMTA 2DIPA 3VDPA 1OYVI 4SGBI 1TOTA 2E5RA 2F3CI 1PCEA 3E2IA 5HI7A 3SGBI 2KMQA 3OXFA 3OXLA 2W0TA 1CT4I 1PTRA 4JCVE 5FUVA 5JHWC 1LR8A 1BUSA 2ERWA 1OVOA 1UVGA 3D00A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HPT A;  1SGE I;  1PPF I;  1M8B A;  2SGE I;  1TUR A;  2NU0 I;  2N17 A;  1KMA A;  2NU2 I;  2WCY A;  2JXD A;  1CT2 I;  3SGQ I;  1Y1B A;  1HDL A;  1YTP A;  1IY6 A;  1IY5 A;  2GKT I;  2KMO A;  1NUB A;  2B0U C;  1R0R I;  1Z7K B;  2NU1 I;  2BUS A;  5DAE A;  2GKV A;  1OMU A;  2M5X A;  2N52 A;  2NU4 I;  1FYB A;  1CGJ I;  1TUS A;  1DS3 I;  1BMO A;  2OVO A;  3B4V C;  1CHO I;  1SGD I;  2KCX A;  2SGF I;  1TBR R;  2QQD A;  1IW4 A;  2KMR A;  1TBQ R;  2QQC A;  1MT1 A;  1LR7 A;  1SGR I;  1PJU A;  1HJA I;  4HGU A;  1CGI I;  2XRC A;  3QTL D;  2NU3 I;  2P6A C;  2LEO A;  1CT0 I;  1AN1 I;  1SGY I;  1SGP I;  1H0Z A;  1TIH A;  1Y1C A;  1YU6 C;  3OVO A;  2ARP F;  1SGQ I;  4GI3 C;  2JYY A;  1CSO I;  2SGD I;  1TGS I;  1N13 A;  3SEK C;  1LR9 A;  1CE3 A;  2V53 A;  2GKR I;  1UVF A;  2KMP A;  1SGN I;  2SGP I;  2JZM A;  1DS2 I;  4OVO A;  2SGQ I;  1M8C A;  1UUC A;  2N71 A;  3HH2 C;  3TJQ A;  1OMT A;  1OYV I;  4SGB I;  2F3C I;  1PCE A;  3SGB I;  2KMQ A;  1CT4 I;  5JHW C;  1LR8 A;  1BUS A;  2ERW A;  1OVO A;  1UVG A; 
#chains in the Genus database with same CATH topology
 1HPT A;  3UGL A;  1SGE I;  1XX6 A;  1PPF I;  1M8B A;  1WGC A;  1TUR A;  2SGE I;  3UEJ A;  3R5C A;  5EX3 A;  5FUX A;  2DB6 A;  1ULN A;  1K7T A;  2N17 A;  2NU0 I;  2QQ0 A;  1Q9B A;  3CXL A;  2OZU A;  1MJ9 A;  2N1A B;  1KMA A;  3MEK A;  2NU2 I;  2UVO A;  1RFH A;  2WCY A;  1UHA A;  1VDD A;  2JXD A;  2ORV A;  2WVJ A;  1CT2 I;  3VDU A;  3SGQ I;  1KBF A;  1PTQ A;  1Y1B A;  1HDL A;  1YTP A;  1IY6 A;  1IY5 A;  2GKT I;  2JW6 A;  2KMO A;  1NUB A;  1P9G A;  2B0U C;  2ENZ A;  3FSY A;  1R0R I;  1FAQ A;  2ENN A;  4E1P A;  1Z7K B;  2NU1 I;  4A24 A;  7WGA A;  2BUS A;  2ELI A;  2GIV A;  2ORW A;  1WKX A;  5FUY A;  2V1C A;  2L7X A;  5DAE A;  3GOX A;  1ULM A;  1OMU A;  2GKV A;  1X4S A;  2YQP A;  2M5X A;  1W4R A;  2CJS C;  4FKD A;  2RC4 A;  2N52 A;  1FAR A;  4B6D A;  2NU4 I;  1FYB A;  1CGJ I;  1TUS A;  3SGB I;  2A20 A;  2L8E A;  4AML A;  3TOA A;  1DS3 I;  1BMO A;  5J8C A;  2OVO A;  3B4V C;  4UXH A;  1CHO I;  1SGD I;  1X74 A;  2KCX A;  2SGF I;  3BJI A;  1TBR R;  2QQD A;  1IW4 A;  4DNC A;  2UZ3 A;  2KMR A;  1TBQ R;  2X52 A;  2QQC A;  2VRW B;  2FNF X;  1S20 A;  1W3S A;  1MT1 A;  2ROW A;  5CCL A;  2RIJ A;  2X3T A;  1LR7 A;  5E3P A;  5E3Q A;  1SGR I;  1PJU A;  1HJA I;  2GVI A;  1R79 A;  2B8T A;  3UEY A;  4HGU A;  3VE5 A;  3OL0 A;  1CGI I;  5HQ8 A;  1K7V A;  2JA1 A;  2XRC A;  5E3R A;  3QTL D;  3TO7 A;  4E1R A;  5CCM A;  5J8F A;  4UXI A;  1V1I A;  2NU3 I;  3UFF A;  1MJA A;  9WGA A;  2P6A C;  2QQE A;  2LEO A;  3R5A A;  2E73 A;  1CT0 I;  3OXG A;  5HI7 A;  2CWH A;  3TO6 A;  1AN1 I;  1SGY I;  2CWF A;  1SGP I;  4MPI A;  4UXJ A;  3UGI A;  1H0Z A;  1TIH A;  3PDN A;  1V1H A;  1Y1C A;  1YU6 C;  1P9Z A;  2ARP F;  1SGQ I;  2OD1 A;  2OU2 A;  2JYY A;  2QPO A;  1CSO I;  1XA6 A;  2LUY A;  1FY7 A;  1TGS I;  1N13 A;  2K9H A;  2SGD I;  3SEK C;  1LR9 A;  2J87 A;  1TBO A;  3E59 A;  3FSX A;  3QAH A;  5FUW A;  2V53 A;  2GKR I;  1CE3 A;  3QWP A;  1UVF A;  2ODD A;  1TBN A;  1XBT A;  2CWG A;  2KMP A;  5EX0 A;  1Y8F A;  3R5B A;  1KBE A;  3UOE A;  3KY9 A;  2V1C C;  2DKV A;  1MJB A;  1WTJ A;  3UGD A;  2WGC A;  2J9R A;  1SGN I;  1U5K A;  3RU0 A;  3R5D A;  3FC3 A;  2SGP I;  3OVO A;  2JZM A;  3TOB A;  1DS2 I;  4OVO A;  2SGQ I;  1M8C A;  1UUC A;  4L9M A;  1ULK A;  2N71 A;  2YUU A;  1NXU A;  2Y0M A;  3HH2 C;  3TJQ A;  1OMT A;  3TO9 A;  2DIP A;  3VDP A;  1OYV I;  4SGB I;  1TOT A;  2E5R A;  2F3C I;  1PCE A;  2PQ8 A;  1Z2I A;  3E2I A;  2KMQ A;  3OXF A;  3OXL A;  2LB7 A;  1K7U A;  1CT4 I;  1WGT A;  1PTR A;  2W0T A;  4GI3 C;  4JCV E;  1LR8 A;  4WP4 A;  2ERW A;  1OVO A;  5FUV A;  5JHW C;  1BUS A;  1UVG A;  1HEV A;  3D00 A; 
#chains in the Genus database with same CATH homology
 1HPT A;  3UGL A;  1SGE I;  1XX6 A;  1PPF I;  1M8B A;  2SGE I;  1TUR A;  3UEJ A;  5EX3 A;  5FUX A;  2DB6 A;  2NU0 I;  2N17 A;  2QQ0 A;  3CXL A;  2N1A B;  1KMA A;  3MEK A;  2NU2 I;  2WCY A;  1RFH A;  1VDD A;  2JXD A;  2ORV A;  2WVJ A;  1CT2 I;  3VDU A;  3SGQ I;  1KBF A;  1PTQ A;  1Y1B A;  1HDL A;  1YTP A;  1IY6 A;  1IY5 A;  2GKT I;  2JW6 A;  2KMO A;  1NUB A;  2B0U C;  2ENZ A;  1R0R I;  1FAQ A;  2ENN A;  4E1P A;  1Z7K B;  2NU1 I;  4A24 A;  2BUS A;  2ELI A;  2ORW A;  5FUY A;  2V1C A;  2L7X A;  5DAE A;  3GOX A;  2GKV A;  1OMU A;  1X4S A;  2YQP A;  2M5X A;  1W4R A;  2CJS C;  4FKD A;  2N52 A;  1FAR A;  4B6D A;  2NU4 I;  1FYB A;  1CGJ I;  1TUS A;  2A20 A;  2L8E A;  1DS3 I;  1BMO A;  2OVO A;  3B4V C;  4UXH A;  1CHO I;  1SGD I;  1X74 A;  2KCX A;  2SGF I;  3BJI A;  1TBR R;  2QQD A;  1IW4 A;  2UZ3 A;  2KMR A;  1TBQ R;  2QQC A;  2VRW B;  2FNF X;  1W3S A;  1MT1 A;  2ROW A;  5CCL A;  1LR7 A;  1SGR I;  1PJU A;  1HJA I;  2GVI A;  1R79 A;  2B8T A;  3UEY A;  4HGU A;  3VE5 A;  3OL0 A;  1CGI I;  5HQ8 A;  2JA1 A;  2XRC A;  3QTL D;  4E1R A;  5CCM A;  4UXI A;  1V1I A;  2NU3 I;  3UFF A;  2P6A C;  2QQE A;  2LEO A;  2E73 A;  1CT0 I;  3OXG A;  1AN1 I;  1SGY I;  1SGP I;  4UXJ A;  3UGI A;  1H0Z A;  1TIH A;  3PDN A;  1V1H A;  1Y1C A;  1YU6 C;  2ARP F;  3OVO A;  1SGQ I;  2OD1 A;  4GI3 C;  2JYY A;  2QPO A;  1CSO I;  1XA6 A;  2LUY A;  2SGD I;  1TGS I;  1N13 A;  2K9H A;  3SEK C;  1LR9 A;  2J87 A;  1TBO A;  3E59 A;  5FUW A;  1CE3 A;  2V53 A;  2GKR I;  3QWP A;  1UVF A;  2ODD A;  1TBN A;  1XBT A;  2KMP A;  5EX0 A;  1Y8F A;  1KBE A;  3KY9 A;  2V1C C;  3UGD A;  2J9R A;  1SGN I;  1U5K A;  3RU0 A;  3FC3 A;  2SGP I;  2JZM A;  1DS2 I;  4OVO A;  2SGQ I;  1M8C A;  1UUC A;  4L9M A;  2N71 A;  2YUU A;  3HH2 C;  3TJQ A;  1OMT A;  2DIP A;  3VDP A;  1OYV I;  4SGB I;  1TOT A;  2E5R A;  2F3C I;  1PCE A;  3E2I A;  5HI7 A;  3SGB I;  2KMQ A;  3OXF A;  3OXL A;  2W0T A;  1CT4 I;  1PTR A;  4JCV E;  5FUV A;  5JHW C;  1LR8 A;  1BUS A;  2ERW A;  1OVO A;  1UVG A;  3D00 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...