9WGAA

2.2 angstroms resolution structure analysis of two refined n-acetylneuraminyllactose-wheat germ agglutinin isolectin complexes
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
171
structure length
171
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCPNNHCCSQYGHCGFGAEYCGAGCQGGPCRADIKCGSQSGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lectin (agglutinin)
molecule keywords WHEAT GERM LECTIN
publication title 2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes.
pubmed doi rcsb
source organism Triticum aestivum
total genus 47
structure length 171
sequence length 171
chains with identical sequence B
ec nomenclature
pdb deposition date 1990-04-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA01
1P9ZA 2DKVA 1WGCA 1WKXA 1K7UA 2X3TA 9WGAA 2WGCA 2CWGA 2X52A 2LB7A 4WP4A 1ULKA 1Q9BA 1K7TA 1K7VA 4MPIA 1ULNA 1UHAA 2UVOA 7WGAA 4AMLA 1HEVA 1ULMA 1P9GA 1WGTA
chains in the Genus database with same CATH superfamily
1P9ZA 2SGPI 5CCLA 2DIPA 2NU1I 2B8TA 1SGDI 2V1CA 2V1CC 2OD1A 2B0UC 3CXLA 3D00A 1FAQA 1TURA 3OXGA 2CWGA 2QQEA 1OMUA 2JA1A 2LB7A 2OU2A 2PQ8A 2SGEI 2WVJA 1IY5A 3TOBA 2ERWA 2QQCA 2ROWA 5J8FA 4FKDA 2ARPF 1ULKA 1W3SA 3UEYA 1K7TA 4GI3C 1TBOA 2SGFI 2L8EA 1YTPA 1YU6C 1XX6A 2JXDA 5FUWA 1N13A 1W4RA 2VRWB 3MEKA 3VDUA 2ODDA 2CJSC 1CT4I 3FSXA 2NU3I 1BMOA 3UFFA 1HEVA 4E1RA 4SGBI 2JW6A 1DS3I 1XA6A 2KCXA 2ENNA 3BJIA 3UGDA 1SGRI 1MT1A 1WGTA 1SGQI 1UVGA 4OVOA 2DKVA 3UEJA 2J9RA 1HJAI 1FY7A 2NU4I 2BUSA 1TBNA 1WKXA 2YUUA 2P6AC 2E73A 1H0ZA 2KMQA 3SEKC 5FUXA 3TO9A 3E2IA 3TJQA 1V1IA 2J87A 4L9MA 4UXJA 3VE5A 1PTRA 3QWPA 1CGJI 1CSOI 1LR8A 1TBQR 2KMPA 2QQ0A 5E3PA 2ENZA 1VDDA 2QPOA 4B6DA 2GKTI 1ULNA 1IY6A 2F3CI 3OVOA 3RU0A 1SGPI 5J8CA 5CCMA 3E59A 2K9HA 2KMOA 3B4VC 2NU0I 2OVOA 1ULMA 1Z7KB 2GKRI 3FSYA 2OZUA 2GKVA 1M8CA 3R5AA 2N71A 2XRCA 3SGBI 3VDPA 1CT0I 1BUSA 2V53A 3R5BA 3GOXA 1NXUA 1UVFA 4JCVE 1WGCA 2GVIA 2Y0MA 5FUYA 1WTJA 9WGAA 2SGDI 1KBEA 1OYVI 1IW4A 2WGCA 5DAEA 2L7XA 2X52A 1MJBA 1KMAA 2GIVA 3PDNA 1R0RI 3KY9A 2RC4A 5E3QA 1PTQA 2SGQI 3TO7A 1X74A 1FYBA 1LR7A 1TGSI 2N17A 1M8BA 2JZMA 4HGUA 2NU2I 4MPIA 1XBTA 3TOAA 5HQ8A 2RIJA 3R5CA 1UHAA 1AN1I 2UVOA 7WGAA 2CWHA 2N1AB 1Z2IA 5E3RA 1OVOA 1NUBA 1LR9A 2ELIA 1CHOI 2CWFA 1U5KA 3SGQI 1Y1CA 1S20A 3TO6A 1RFHA 1CGII 1P9GA 1MJ9A 2E5RA 2JYYA 4E1PA 3HH2C 1MJAA 5HI7A 1R79A 1SGNI 2DB6A 2W0TA 2YQPA 1CT2I 1K7UA 1TIHA 2X3TA 3UGIA 1HDLA 2ORVA 1SGYI 3UGLA 4A24A 2A20A 1X4SA 2ORWA 1PCEA 1TUSA 2UZ3A 4UXIA 4DNCA 5EX0A 1FARA 4WP4A 1TOTA 1PPFI 2N52A 1Q9BA 3OL0A 1TBRR 1K7VA 3R5DA 3OXFA 5EX3A 3OXLA 1DS2I 1HPTA 3FC3A 1KBFA 2M5XA 1SGEI 2FNFX 2LUYA 1PJUA 3QTLD 5JHWC 4AMLA 2QQDA 1OMTA 3UOEA 4UXHA 3QAHA 1V1HA 1CE3A 1Y8FA 2KMRA 2LEOA 1UUCA 2WCYA 5FUVA 1Y1BA
chains in the Genus database with same CATH topology
1P9ZA 2DKVA 1WGCA 1WKXA 1K7UA 2X3TA 9WGAA 2WGCA 2CWGA 2X52A 2LB7A 4WP4A 1ULKA 1Q9BA 1K7TA 1K7VA 4MPIA 1ULNA 1UHAA 2UVOA 7WGAA 4AMLA 1HEVA 1ULMA 1P9GA 1WGTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P9Z A;  2DKV A;  1WGC A;  1WKX A;  1K7U A;  2X3T A;  9WGA A;  2WGC A;  2CWG A;  2X52 A;  2LB7 A;  4WP4 A;  1ULK A;  1Q9B A;  1K7T A;  1K7V A;  4MPI A;  1ULN A;  1UHA A;  2UVO A;  7WGA A;  4AML A;  1HEV A;  1ULM A;  1P9G A;  1WGT A; 
#chains in the Genus database with same CATH topology
 1P9Z A;  2SGP I;  5CCL A;  2DIP A;  2NU1 I;  2B8T A;  1SGD I;  2V1C A;  2V1C C;  2OD1 A;  2B0U C;  3CXL A;  3D00 A;  1FAQ A;  1TUR A;  3OXG A;  2CWG A;  2QQE A;  1OMU A;  2JA1 A;  2LB7 A;  2OU2 A;  2PQ8 A;  2SGE I;  2WVJ A;  1IY5 A;  3TOB A;  2ERW A;  2QQC A;  2ROW A;  5J8F A;  4FKD A;  2ARP F;  1ULK A;  1W3S A;  3UEY A;  1K7T A;  4GI3 C;  1TBO A;  2SGF I;  2L8E A;  1YTP A;  1YU6 C;  1XX6 A;  2JXD A;  5FUW A;  1N13 A;  1W4R A;  2VRW B;  3MEK A;  3VDU A;  2ODD A;  2CJS C;  1CT4 I;  3FSX A;  2NU3 I;  1BMO A;  3UFF A;  1HEV A;  4E1R A;  4SGB I;  2JW6 A;  1DS3 I;  1XA6 A;  2KCX A;  2ENN A;  3BJI A;  3UGD A;  1SGR I;  1MT1 A;  1WGT A;  1SGQ I;  1UVG A;  4OVO A;  2DKV A;  3UEJ A;  2J9R A;  1HJA I;  1FY7 A;  2NU4 I;  2BUS A;  1TBN A;  1WKX A;  2YUU A;  2P6A C;  2E73 A;  1H0Z A;  2KMQ A;  3SEK C;  5FUX A;  3TO9 A;  3E2I A;  3TJQ A;  1V1I A;  2J87 A;  4L9M A;  4UXJ A;  3VE5 A;  1PTR A;  3QWP A;  1CGJ I;  1CSO I;  1LR8 A;  1TBQ R;  2KMP A;  2QQ0 A;  5E3P A;  2ENZ A;  1VDD A;  2QPO A;  4B6D A;  2GKT I;  1ULN A;  1IY6 A;  2F3C I;  3OVO A;  3RU0 A;  1SGP I;  5J8C A;  5CCM A;  3E59 A;  2K9H A;  2KMO A;  3B4V C;  2NU0 I;  2OVO A;  1ULM A;  1Z7K B;  2GKR I;  3FSY A;  2OZU A;  2GKV A;  1M8C A;  3R5A A;  2N71 A;  2XRC A;  3SGB I;  3VDP A;  1CT0 I;  1BUS A;  2V53 A;  3R5B A;  3GOX A;  1NXU A;  1UVF A;  4JCV E;  1WGC A;  2GVI A;  2Y0M A;  5FUY A;  1WTJ A;  9WGA A;  2SGD I;  1KBE A;  1OYV I;  1IW4 A;  2WGC A;  5DAE A;  2L7X A;  2X52 A;  1MJB A;  1KMA A;  2GIV A;  3PDN A;  1R0R I;  3KY9 A;  2RC4 A;  5E3Q A;  1PTQ A;  2SGQ I;  3TO7 A;  1X74 A;  1FYB A;  1LR7 A;  1TGS I;  2N17 A;  1M8B A;  2JZM A;  4HGU A;  2NU2 I;  4MPI A;  1XBT A;  3TOA A;  5HQ8 A;  2RIJ A;  3R5C A;  1UHA A;  1AN1 I;  2UVO A;  7WGA A;  2CWH A;  2N1A B;  1Z2I A;  5E3R A;  1OVO A;  1NUB A;  1LR9 A;  2ELI A;  1CHO I;  2CWF A;  1U5K A;  3SGQ I;  1Y1C A;  1S20 A;  3TO6 A;  1RFH A;  1CGI I;  1P9G A;  1MJ9 A;  2E5R A;  2JYY A;  4E1P A;  3HH2 C;  1MJA A;  5HI7 A;  1R79 A;  1SGN I;  2DB6 A;  2W0T A;  2YQP A;  1CT2 I;  1K7U A;  1TIH A;  2X3T A;  3UGI A;  1HDL A;  2ORV A;  1SGY I;  3UGL A;  4A24 A;  2A20 A;  1X4S A;  2ORW A;  1PCE A;  1TUS A;  2UZ3 A;  4UXI A;  4DNC A;  5EX0 A;  1FAR A;  4WP4 A;  1TOT A;  1PPF I;  2N52 A;  1Q9B A;  3OL0 A;  1TBR R;  1K7V A;  3R5D A;  3OXF A;  5EX3 A;  3OXL A;  1DS2 I;  1HPT A;  3FC3 A;  1KBF A;  2M5X A;  1SGE I;  2FNF X;  2LUY A;  1PJU A;  3QTL D;  5JHW C;  4AML A;  2QQD A;  1OMT A;  3UOE A;  4UXH A;  3QAH A;  1V1H A;  1CE3 A;  1Y8F A;  2KMR A;  2LEO A;  1UUC A;  2WCY A;  5FUV A;  1Y1B A; 
#chains in the Genus database with same CATH homology
 1P9Z A;  2DKV A;  1WGC A;  1WKX A;  1K7U A;  2X3T A;  9WGA A;  2WGC A;  2CWG A;  2X52 A;  2LB7 A;  4WP4 A;  1ULK A;  1Q9B A;  1K7T A;  1K7V A;  4MPI A;  1ULN A;  1UHA A;  2UVO A;  7WGA A;  4AML A;  1HEV A;  1ULM A;  1P9G A;  1WGT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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