9WGAA

2.2 angstroms resolution structure analysis of two refined n-acetylneuraminyllactose-wheat germ agglutinin isolectin complexes
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
171
structure length
171
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCPNNHCCSQYGHCGFGAEYCGAGCQGGPCRADIKCGSQSGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lectin (agglutinin)
molecule keywords WHEAT GERM LECTIN
publication title 2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes.
pubmed doi rcsb
source organism Triticum aestivum
total genus 47
structure length 171
sequence length 171
chains with identical sequence B
ec nomenclature
pdb deposition date 1990-04-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 9wgaA01
1P9GA 1K7UA 1HEVA 1UHAA 2UVOA 4AMLA 2X52A 4WP4A 1ULKA 1Q9BA 1ULNA 1WKXA 1WGCA 2WGCA 4MPIA 2X3TA 1WGTA 7WGAA 1K7VA 2DKVA 9WGAA 2LB7A 2CWGA 1ULMA 1P9ZA 1K7TA
chains in the Genus database with same CATH superfamily
1W3SA 2ARPF 2KCXA 1Z7KB 1SGQI 3RU0A 1FAQA 2X52A 1ULKA 5FUXA 1OYVI 1ULNA 3R5AA 1W4RA 2J87A 2NU1I 2N1AB 2W0TA 2DB6A 1M8BA 1TBQR 1WGCA 2CWFA 3CXLA 5DAEA 1UVGA 1TIHA 1FARA 2SGEI 4JCVE 1CT0I 1S20A 1N13A 3FSYA 2L7XA 4UXHA 2BUSA 2CJSC 2V1CA 9WGAA 2K9HA 2CWGA 3B4VC 3OXFA 2WVJA 1CT2I 2KMQA 3GOXA 2YQPA 3PDNA 1U5KA 2VRWB 3UEYA 1P9GA 4SGBI 2FNFX 2QQCA 2QQDA 1UHAA 4AMLA 5E3PA 2OD1A 1OMTA 3UGDA 2GIVA 1TGSI 2KMOA 3BJIA 1LR8A 1SGEI 2LUYA 1KMAA 1SGRI 1WKXA 1SGYI 1CT4I 1OMUA 2RC4A 2WGCA 1CHOI 4L9MA 1LR7A 2QPOA 3OVOA 2JA1A 3UGIA 4GI3C 2NU0I 1IY5A 1MJAA 3UEJA 1H0ZA 3OXGA 5EX0A 1X4SA 1CGJI 3OL0A 2DKVA 2P6AC 3R5DA 5FUWA 2GKRI 1ULMA 3E2IA 5EX3A 2N52A 2PQ8A 3TJQA 1K7TA 1TOTA 2JZMA 3VDUA 1KBFA 1Y8FA 1OVOA 1XA6A 2QQEA 4UXJA 2SGPI 4B6DA 1PJUA 4OVOA 3UGLA 3D00A 1RFHA 1HEVA 1AN1I 1V1IA 2SGDI 1SGPI 1HPTA 2UVOA 2WCYA 3QAHA 5J8CA 3OXLA 1FYBA 1CE3A 2ENNA 1IW4A 1DS2I 1CSOI 1PTRA 1PTQA 2ODDA 1LR9A 2M5XA 1FY7A 1SGDI 2B8TA 3VDPA 1HDLA 1TUSA 3R5BA 5CCLA 2GKTI 2CWHA 1XBTA 1VDDA 2NU3I 3TOAA 2YUUA 5HQ8A 2X3TA 1PCEA 2V53A 2ORVA 3E59A 4HGUA 1DS3I 3HH2C 2J9RA 1KBEA 2Y0MA 1WGTA 7WGAA 2E5RA 1K7VA 1TBOA 3R5CA 1XX6A 1SGNI 2ENZA 3FSXA 1MJ9A 2DIPA 1TBRR 5FUVA 2UZ3A 2GKVA 3TO6A 3FC3A 2KMRA 1CGII 1UUCA 1K7UA 2ORWA 2OZUA 5JHWC 1R0RI 1UVFA 5CCMA 1BMOA 2JYYA 4WP4A 1YU6C 1NUBA 1Q9BA 2JW6A 3UFFA 3UOEA 4DNCA 5J8FA 1BUSA 3SGBI 2F3CI 2ELIA 2NU4I 4UXIA 3KY9A 4A24A 1MT1A 3SEKC 1TURA 2KMPA 4FKDA 4MPIA 1Z2IA 5E3RA 5HI7A 2B0UC 1HJAI 4E1PA 1IY6A 1M8CA 3QTLD 2V1CC 2GVIA 4E1RA 3SGQI 5FUYA 3QWPA 3MEKA 2QQ0A 2ROWA 1MJBA 1R79A 2LEOA 2ERWA 2L8EA 2RIJA 2OU2A 2XRCA 2SGQI 2A20A 3TO7A 1Y1BA 1Y1CA 2NU2I 3VE5A 1X74A 2LB7A 2OVOA 5E3QA 2JXDA 1WTJA 2N17A 1P9ZA 1NXUA 3TO9A 1YTPA 2N71A 3TOBA 1PPFI 1TBNA 1V1HA 2E73A 2SGFI
chains in the Genus database with same CATH topology
1P9GA 1K7UA 1HEVA 1UHAA 2UVOA 4AMLA 2X52A 4WP4A 1ULKA 1Q9BA 1ULNA 1WKXA 1WGCA 2WGCA 4MPIA 2X3TA 1WGTA 7WGAA 1K7VA 2DKVA 9WGAA 2LB7A 2CWGA 1ULMA 1P9ZA 1K7TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P9G A;  1K7U A;  1HEV A;  1UHA A;  2UVO A;  4AML A;  2X52 A;  4WP4 A;  1ULK A;  1Q9B A;  1ULN A;  1WKX A;  1WGC A;  2WGC A;  4MPI A;  2X3T A;  1WGT A;  7WGA A;  1K7V A;  2DKV A;  9WGA A;  2LB7 A;  2CWG A;  1ULM A;  1P9Z A;  1K7T A; 
#chains in the Genus database with same CATH topology
 1W3S A;  2ARP F;  2KCX A;  1Z7K B;  1SGQ I;  3RU0 A;  1FAQ A;  2X52 A;  1ULK A;  5FUX A;  1OYV I;  1ULN A;  3R5A A;  1W4R A;  2J87 A;  2NU1 I;  2N1A B;  2W0T A;  2DB6 A;  1M8B A;  1TBQ R;  1WGC A;  2CWF A;  3CXL A;  5DAE A;  1UVG A;  1TIH A;  1FAR A;  2SGE I;  4JCV E;  1CT0 I;  1S20 A;  1N13 A;  3FSY A;  2L7X A;  4UXH A;  2BUS A;  2CJS C;  2V1C A;  9WGA A;  2K9H A;  2CWG A;  3B4V C;  3OXF A;  2WVJ A;  1CT2 I;  2KMQ A;  3GOX A;  2YQP A;  3PDN A;  1U5K A;  2VRW B;  3UEY A;  1P9G A;  4SGB I;  2FNF X;  2QQC A;  2QQD A;  1UHA A;  4AML A;  5E3P A;  2OD1 A;  1OMT A;  3UGD A;  2GIV A;  1TGS I;  2KMO A;  3BJI A;  1LR8 A;  1SGE I;  2LUY A;  1KMA A;  1SGR I;  1WKX A;  1SGY I;  1CT4 I;  1OMU A;  2RC4 A;  2WGC A;  1CHO I;  4L9M A;  1LR7 A;  2QPO A;  3OVO A;  2JA1 A;  3UGI A;  4GI3 C;  2NU0 I;  1IY5 A;  1MJA A;  3UEJ A;  1H0Z A;  3OXG A;  5EX0 A;  1X4S A;  1CGJ I;  3OL0 A;  2DKV A;  2P6A C;  3R5D A;  5FUW A;  2GKR I;  1ULM A;  3E2I A;  5EX3 A;  2N52 A;  2PQ8 A;  3TJQ A;  1K7T A;  1TOT A;  2JZM A;  3VDU A;  1KBF A;  1Y8F A;  1OVO A;  1XA6 A;  2QQE A;  4UXJ A;  2SGP I;  4B6D A;  1PJU A;  4OVO A;  3UGL A;  3D00 A;  1RFH A;  1HEV A;  1AN1 I;  1V1I A;  2SGD I;  1SGP I;  1HPT A;  2UVO A;  2WCY A;  3QAH A;  5J8C A;  3OXL A;  1FYB A;  1CE3 A;  2ENN A;  1IW4 A;  1DS2 I;  1CSO I;  1PTR A;  1PTQ A;  2ODD A;  1LR9 A;  2M5X A;  1FY7 A;  1SGD I;  2B8T A;  3VDP A;  1HDL A;  1TUS A;  3R5B A;  5CCL A;  2GKT I;  2CWH A;  1XBT A;  1VDD A;  2NU3 I;  3TOA A;  2YUU A;  5HQ8 A;  2X3T A;  1PCE A;  2V53 A;  2ORV A;  3E59 A;  4HGU A;  1DS3 I;  3HH2 C;  2J9R A;  1KBE A;  2Y0M A;  1WGT A;  7WGA A;  2E5R A;  1K7V A;  1TBO A;  3R5C A;  1XX6 A;  1SGN I;  2ENZ A;  3FSX A;  1MJ9 A;  2DIP A;  1TBR R;  5FUV A;  2UZ3 A;  2GKV A;  3TO6 A;  3FC3 A;  2KMR A;  1CGI I;  1UUC A;  1K7U A;  2ORW A;  2OZU A;  5JHW C;  1R0R I;  1UVF A;  5CCM A;  1BMO A;  2JYY A;  4WP4 A;  1YU6 C;  1NUB A;  1Q9B A;  2JW6 A;  3UFF A;  3UOE A;  4DNC A;  5J8F A;  1BUS A;  3SGB I;  2F3C I;  2ELI A;  2NU4 I;  4UXI A;  3KY9 A;  4A24 A;  1MT1 A;  3SEK C;  1TUR A;  2KMP A;  4FKD A;  4MPI A;  1Z2I A;  5E3R A;  5HI7 A;  2B0U C;  1HJA I;  4E1P A;  1IY6 A;  1M8C A;  3QTL D;  2V1C C;  2GVI A;  4E1R A;  3SGQ I;  5FUY A;  3QWP A;  3MEK A;  2QQ0 A;  2ROW A;  1MJB A;  1R79 A;  2LEO A;  2ERW A;  2L8E A;  2RIJ A;  2OU2 A;  2XRC A;  2SGQ I;  2A20 A;  3TO7 A;  1Y1B A;  1Y1C A;  2NU2 I;  3VE5 A;  1X74 A;  2LB7 A;  2OVO A;  5E3Q A;  2JXD A;  1WTJ A;  2N17 A;  1P9Z A;  1NXU A;  3TO9 A;  1YTP A;  2N71 A;  3TOB A;  1PPF I;  1TBN A;  1V1H A;  2E73 A;  2SGF I; 
#chains in the Genus database with same CATH homology
 1P9G A;  1K7U A;  1HEV A;  1UHA A;  2UVO A;  4AML A;  2X52 A;  4WP4 A;  1ULK A;  1Q9B A;  1ULN A;  1WKX A;  1WGC A;  2WGC A;  4MPI A;  2X3T A;  1WGT A;  7WGA A;  1K7V A;  2DKV A;  9WGA A;  2LB7 A;  2CWG A;  1ULM A;  1P9Z A;  1K7T A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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