3UGLA

Structural and functional characterization of an anesthetic binding site in the second cysteine-rich domain of protein kinase c delta
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
65
structure length
65
Chain Sequence
GSRRASVGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFIVTD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structural and Functional Characterization of an Anesthetic Binding Site in the Second Cysteine-Rich Domain of Protein Kinase Cdelta
pubmed doi rcsb
molecule keywords Proteine kinase C delta type
source organism Mus musculus
molecule tags Metal binding protein
total genus 11
structure length 65
sequence length 65
chains with identical sequence B
ec nomenclature ec 2.7.10.2: Non-specific protein-tyrosine kinase.
pdb deposition date 2011-11-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3uglA01
3UFFA 4UXIA 2VRWB 2QQEA 2JA1A 1PTQA 1TBNA 3BJIA 3UEYA 1RFHA 1FAQA 4UXHA 1KBFA 2WVJA 2YUUA 2GVIA 3UGDA 2FNFX 2J9RA 1KBEA 2QQ0A 2ROWA 4UXJA 1R79A 3CXLA 5FUXA 1Y8FA 5FUWA 5FUVA 2ENNA 3UEJA 2UZ3A 2QPOA 1XBTA 3UGLA 2DB6A 1TBOA 3KY9A 5FUYA 2ELIA 1XX6A 2J87A 4FKDA 4B6DA 4L9MA 2ORWA 3UGIA 1FARA 3E2IA 1W4RA 1PTRA 1XA6A 2E73A 2B8TA 2ENZA 2ORVA
chains in the Genus database with same CATH superfamily
1K7UA 1H0ZA 2CWFA 2JXDA 2DKVA 1R0RI 1M8CA 1RFHA 1X74A 1CT2I 1TURA 2GKTI 4OVOA 2GVIA 3QWPA 3UGDA 3TOBA 2QQCA 1TBRR 2FNFX 2X3TA 2SGFI 3R5AA 1IW4A 1DS2I 4UXJA 2N1AB 3E59A 4WP4A 2ENNA 2M5XA 1HEVA 1PPFI 5HQ8A 1TBOA 3KY9A 1SGYI 2OVOA 1UVGA 2N71A 3SGBI 9WGAA 4B6DA 4L9MA 3PDNA 1DS3I 1TIHA 1SGQI 2OD1A 3UGIA 3E2IA 1WGCA 1U5KA 1CHOI 1V1HA 2SGEI 3OVOA 1KMAA 3TOAA 2BUSA 1MJBA 2L8EA 3FSXA 1WGTA 5J8FA 2GKRI 2JW6A 2KCXA 7WGAA 2CWHA 1P9GA 2QQEA 2ERWA 2NU1I 2XRCA 1TBNA 3BJIA 5E3QA 3RU0A 1FAQA 1NUBA 4UXHA 4MPIA 2OZUA 1X4SA 1KBFA 1OMTA 2OU2A 2WVJA 2YUUA 4GI3C 4A24A 2F3CI 2QQ0A 1HDLA 1K7VA 2NU3I 2RIJA 1R79A 1UVFA 3VDPA 5FUXA 4SGBI 1ULMA 1YTPA 5HI7A 1Y1BA 3FSYA 1Q9BA 1CT0I 2KMRA 2ODDA 2LUYA 3OL0A 5J8CA 1W3SA 2ELIA 2DIPA 1BMOA 2E5RA 1FY7A 2LB7A 1YU6C 3TO6A 2CWGA 1PTRA 1IY6A 2B8TA 2QQDA 3R5CA 3SEKC 3UOEA 2ENZA 2ORVA 3UFFA 1S20A 2VRWB 1CGJI 2N17A 2NU4I 1AN1I 2KMPA 2JA1A 2SGPI 1FYBA 1M8BA 1SGNI 1PCEA 1P9ZA 3TO9A 2B0UC 3QAHA 1VDDA 1TBQR 4JCVE 2UVOA 1BUSA 1Z7KB 1CGII 1WTJA 3OXLA 2WCYA 1K7TA 1HPTA 1OMUA 2CJSC 3CXLA 1CE3A 1V1IA 3HH2C 1LR7A 2V1CC 2UZ3A 2QPOA 1XBTA 2KMQA 5FUVA 3UGLA 1ULKA 2DB6A 3R5BA 5DAEA 2P6AC 1UUCA 2Y0MA 3D00A 1Z2IA 1CT4I 3MEKA 5FUYA 4AMLA 2LEOA 1XX6A 2J87A 4FKDA 2RC4A 1MJ9A 1SGEI 2GKVA 3GOXA 1LR8A 1MJAA 1XA6A 2E73A 3QTLD 2L7XA 5EX3A 4E1PA 2N52A 1OYVI 3OXGA 3FC3A 2X52A 4UXIA 2V1CA 3SGQI 2NU0I 2WGCA 1PTQA 1SGRI 1CSOI 3UEYA 2K9HA 1SGDI 2SGQI 5E3RA 2JZMA 1TUSA 1SGPI 1KBEA 1MT1A 1WKXA 2J9RA 2ROWA 3B4VC 4DNCA 1Y8FA 3VE5A 2A20A 1PJUA 5FUWA 3TJQA 3UEJA 2JYYA 1N13A 3TO7A 1ULNA 1Y1CA 2W0TA 5CCLA 1HJAI 2KMOA 5EX0A 1IY5A 1TGSI 2ARPF 1OVOA 5CCMA 1LR9A 2PQ8A 2YQPA 3R5DA 2ORWA 3VDUA 4HGUA 4E1RA 3OXFA 2V53A 1FARA 5E3PA 1W4RA 1UHAA 2GIVA 1NXUA 1TOTA 2NU2I 2SGDI 5JHWC
chains in the Genus database with same CATH topology
1H0ZA 2JXDA 1X74A 1M8CA 1R0RI 1RFHA 1CT2I 1TURA 2GKTI 4OVOA 2GVIA 3QWPA 3UGDA 2QQCA 1TBRR 2FNFX 1IW4A 2SGFI 1DS2I 4UXJA 2N1AB 3E59A 2ENNA 2M5XA 1PPFI 5HQ8A 1TBOA 3KY9A 1SGYI 2OVOA 1UVGA 2N71A 3SGBI 4B6DA 4L9MA 3PDNA 1DS3I 1TIHA 1SGQI 2OD1A 3UGIA 3E2IA 3OVOA 1U5KA 1CHOI 1V1HA 2SGEI 1KMAA 2BUSA 2L8EA 2GKRI 2JW6A 2KCXA 2QQEA 2ERWA 2NU1I 2XRCA 1TBNA 3BJIA 3RU0A 1FAQA 1NUBA 4UXHA 1X4SA 1KBFA 1OMTA 2WVJA 2YUUA 4GI3C 4A24A 2F3CI 2QQ0A 1HDLA 2NU3I 1R79A 1UVFA 3VDPA 5FUXA 4SGBI 5HI7A 1YTPA 1Y1BA 2KMRA 1CT0I 2ODDA 3OL0A 2LUYA 1W3SA 2ELIA 2DIPA 1BMOA 2E5RA 1YU6C 1PTRA 1IY6A 2B8TA 2QQDA 3SEKC 2ENZA 2ORVA 3UFFA 2VRWB 1CGJI 2N17A 2NU4I 1AN1I 2KMPA 2JA1A 2SGPI 1FYBA 1M8BA 1SGNI 1PCEA 2B0UC 1VDDA 1TBQR 4JCVE 1BUSA 1Z7KB 1CGII 3OXLA 2WCYA 1HPTA 1OMUA 2CJSC 3CXLA 1CE3A 1V1IA 3HH2C 1LR7A 2V1CC 2UZ3A 2QPOA 1XBTA 2KMQA 5FUVA 3UGLA 2DB6A 5DAEA 2P6AC 1UUCA 3D00A 3MEKA 5FUYA 1CT4I 2LEOA 1XX6A 2J87A 4FKDA 1SGEI 2GKVA 3GOXA 1LR8A 1XA6A 2E73A 3QTLD 2L7XA 5EX3A 4E1PA 2N52A 1OYVI 3OXGA 3FC3A 4UXIA 2V1CA 3SGQI 2NU0I 1PTQA 1SGRI 1CSOI 3UEYA 2K9HA 1SGDI 2SGQI 2JZMA 1TUSA 1SGPI 1KBEA 1MT1A 2J9RA 2ROWA 3B4VC 1Y8FA 3VE5A 2A20A 1PJUA 5FUWA 3TJQA 3UEJA 2JYYA 1N13A 1Y1CA 2W0TA 5CCLA 1HJAI 2KMOA 5EX0A 1IY5A 1TGSI 2ARPF 1OVOA 5CCMA 1LR9A 2YQPA 3VDUA 2ORWA 4E1RA 4HGUA 3OXFA 2V53A 1FARA 1W4RA 1TOTA 2NU2I 2SGDI 5JHWC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3UFF A;  4UXI A;  2VRW B;  2QQE A;  2JA1 A;  1PTQ A;  1TBN A;  3BJI A;  3UEY A;  1RFH A;  1FAQ A;  4UXH A;  1KBF A;  2WVJ A;  2YUU A;  2GVI A;  3UGD A;  2FNF X;  2J9R A;  1KBE A;  2QQ0 A;  2ROW A;  4UXJ A;  1R79 A;  3CXL A;  5FUX A;  1Y8F A;  5FUW A;  5FUV A;  2ENN A;  3UEJ A;  2UZ3 A;  2QPO A;  1XBT A;  3UGL A;  2DB6 A;  1TBO A;  3KY9 A;  5FUY A;  2ELI A;  1XX6 A;  2J87 A;  4FKD A;  4B6D A;  4L9M A;  2ORW A;  3UGI A;  1FAR A;  3E2I A;  1W4R A;  1PTR A;  1XA6 A;  2E73 A;  2B8T A;  2ENZ A;  2ORV A; 
#chains in the Genus database with same CATH topology
 1K7U A;  1H0Z A;  2CWF A;  2JXD A;  2DKV A;  1R0R I;  1M8C A;  1RFH A;  1X74 A;  1CT2 I;  1TUR A;  2GKT I;  4OVO A;  2GVI A;  3QWP A;  3UGD A;  3TOB A;  2QQC A;  1TBR R;  2FNF X;  2X3T A;  2SGF I;  3R5A A;  1IW4 A;  1DS2 I;  4UXJ A;  2N1A B;  3E59 A;  4WP4 A;  2ENN A;  2M5X A;  1HEV A;  1PPF I;  5HQ8 A;  1TBO A;  3KY9 A;  1SGY I;  2OVO A;  1UVG A;  2N71 A;  3SGB I;  9WGA A;  4B6D A;  4L9M A;  3PDN A;  1DS3 I;  1TIH A;  1SGQ I;  2OD1 A;  3UGI A;  3E2I A;  1WGC A;  1U5K A;  1CHO I;  1V1H A;  2SGE I;  3OVO A;  1KMA A;  3TOA A;  2BUS A;  1MJB A;  2L8E A;  3FSX A;  1WGT A;  5J8F A;  2GKR I;  2JW6 A;  2KCX A;  7WGA A;  2CWH A;  1P9G A;  2QQE A;  2ERW A;  2NU1 I;  2XRC A;  1TBN A;  3BJI A;  5E3Q A;  3RU0 A;  1FAQ A;  1NUB A;  4UXH A;  4MPI A;  2OZU A;  1X4S A;  1KBF A;  1OMT A;  2OU2 A;  2WVJ A;  2YUU A;  4GI3 C;  4A24 A;  2F3C I;  2QQ0 A;  1HDL A;  1K7V A;  2NU3 I;  2RIJ A;  1R79 A;  1UVF A;  3VDP A;  5FUX A;  4SGB I;  1ULM A;  1YTP A;  5HI7 A;  1Y1B A;  3FSY A;  1Q9B A;  1CT0 I;  2KMR A;  2ODD A;  2LUY A;  3OL0 A;  5J8C A;  1W3S A;  2ELI A;  2DIP A;  1BMO A;  2E5R A;  1FY7 A;  2LB7 A;  1YU6 C;  3TO6 A;  2CWG A;  1PTR A;  1IY6 A;  2B8T A;  2QQD A;  3R5C A;  3SEK C;  3UOE A;  2ENZ A;  2ORV A;  3UFF A;  1S20 A;  2VRW B;  1CGJ I;  2N17 A;  2NU4 I;  1AN1 I;  2KMP A;  2JA1 A;  2SGP I;  1FYB A;  1M8B A;  1SGN I;  1PCE A;  1P9Z A;  3TO9 A;  2B0U C;  3QAH A;  1VDD A;  1TBQ R;  4JCV E;  2UVO A;  1BUS A;  1Z7K B;  1CGI I;  1WTJ A;  3OXL A;  2WCY A;  1K7T A;  1HPT A;  1OMU A;  2CJS C;  3CXL A;  1CE3 A;  1V1I A;  3HH2 C;  1LR7 A;  2V1C C;  2UZ3 A;  2QPO A;  1XBT A;  2KMQ A;  5FUV A;  3UGL A;  1ULK A;  2DB6 A;  3R5B A;  5DAE A;  2P6A C;  1UUC A;  2Y0M A;  3D00 A;  1Z2I A;  1CT4 I;  3MEK A;  5FUY A;  4AML A;  2LEO A;  1XX6 A;  2J87 A;  4FKD A;  2RC4 A;  1MJ9 A;  1SGE I;  2GKV A;  3GOX A;  1LR8 A;  1MJA A;  1XA6 A;  2E73 A;  3QTL D;  2L7X A;  5EX3 A;  4E1P A;  2N52 A;  1OYV I;  3OXG A;  3FC3 A;  2X52 A;  4UXI A;  2V1C A;  3SGQ I;  2NU0 I;  2WGC A;  1PTQ A;  1SGR I;  1CSO I;  3UEY A;  2K9H A;  1SGD I;  2SGQ I;  5E3R A;  2JZM A;  1TUS A;  1SGP I;  1KBE A;  1MT1 A;  1WKX A;  2J9R A;  2ROW A;  3B4V C;  4DNC A;  1Y8F A;  3VE5 A;  2A20 A;  1PJU A;  5FUW A;  3TJQ A;  3UEJ A;  2JYY A;  1N13 A;  3TO7 A;  1ULN A;  1Y1C A;  2W0T A;  5CCL A;  1HJA I;  2KMO A;  5EX0 A;  1IY5 A;  1TGS I;  2ARP F;  1OVO A;  5CCM A;  1LR9 A;  2PQ8 A;  2YQP A;  3R5D A;  2ORW A;  3VDU A;  4HGU A;  4E1R A;  3OXF A;  2V53 A;  1FAR A;  5E3P A;  1W4R A;  1UHA A;  2GIV A;  1NXU A;  1TOT A;  2NU2 I;  2SGD I;  5JHW C; 
#chains in the Genus database with same CATH homology
 1H0Z A;  2JXD A;  1X74 A;  1M8C A;  1R0R I;  1RFH A;  1CT2 I;  1TUR A;  2GKT I;  4OVO A;  2GVI A;  3QWP A;  3UGD A;  2QQC A;  1TBR R;  2FNF X;  1IW4 A;  2SGF I;  1DS2 I;  4UXJ A;  2N1A B;  3E59 A;  2ENN A;  2M5X A;  1PPF I;  5HQ8 A;  1TBO A;  3KY9 A;  1SGY I;  2OVO A;  1UVG A;  2N71 A;  3SGB I;  4B6D A;  4L9M A;  3PDN A;  1DS3 I;  1TIH A;  1SGQ I;  2OD1 A;  3UGI A;  3E2I A;  3OVO A;  1U5K A;  1CHO I;  1V1H A;  2SGE I;  1KMA A;  2BUS A;  2L8E A;  2GKR I;  2JW6 A;  2KCX A;  2QQE A;  2ERW A;  2NU1 I;  2XRC A;  1TBN A;  3BJI A;  3RU0 A;  1FAQ A;  1NUB A;  4UXH A;  1X4S A;  1KBF A;  1OMT A;  2WVJ A;  2YUU A;  4GI3 C;  4A24 A;  2F3C I;  2QQ0 A;  1HDL A;  2NU3 I;  1R79 A;  1UVF A;  3VDP A;  5FUX A;  4SGB I;  5HI7 A;  1YTP A;  1Y1B A;  2KMR A;  1CT0 I;  2ODD A;  3OL0 A;  2LUY A;  1W3S A;  2ELI A;  2DIP A;  1BMO A;  2E5R A;  1YU6 C;  1PTR A;  1IY6 A;  2B8T A;  2QQD A;  3SEK C;  2ENZ A;  2ORV A;  3UFF A;  2VRW B;  1CGJ I;  2N17 A;  2NU4 I;  1AN1 I;  2KMP A;  2JA1 A;  2SGP I;  1FYB A;  1M8B A;  1SGN I;  1PCE A;  2B0U C;  1VDD A;  1TBQ R;  4JCV E;  1BUS A;  1Z7K B;  1CGI I;  3OXL A;  2WCY A;  1HPT A;  1OMU A;  2CJS C;  3CXL A;  1CE3 A;  1V1I A;  3HH2 C;  1LR7 A;  2V1C C;  2UZ3 A;  2QPO A;  1XBT A;  2KMQ A;  5FUV A;  3UGL A;  2DB6 A;  5DAE A;  2P6A C;  1UUC A;  3D00 A;  3MEK A;  5FUY A;  1CT4 I;  2LEO A;  1XX6 A;  2J87 A;  4FKD A;  1SGE I;  2GKV A;  3GOX A;  1LR8 A;  1XA6 A;  2E73 A;  3QTL D;  2L7X A;  5EX3 A;  4E1P A;  2N52 A;  1OYV I;  3OXG A;  3FC3 A;  4UXI A;  2V1C A;  3SGQ I;  2NU0 I;  1PTQ A;  1SGR I;  1CSO I;  3UEY A;  2K9H A;  1SGD I;  2SGQ I;  2JZM A;  1TUS A;  1SGP I;  1KBE A;  1MT1 A;  2J9R A;  2ROW A;  3B4V C;  1Y8F A;  3VE5 A;  2A20 A;  1PJU A;  5FUW A;  3TJQ A;  3UEJ A;  2JYY A;  1N13 A;  1Y1C A;  2W0T A;  5CCL A;  1HJA I;  2KMO A;  5EX0 A;  1IY5 A;  1TGS I;  2ARP F;  1OVO A;  5CCM A;  1LR9 A;  2YQP A;  3VDU A;  2ORW A;  4E1R A;  4HGU A;  3OXF A;  2V53 A;  1FAR A;  1W4R A;  1TOT A;  2NU2 I;  2SGD I;  5JHW C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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