3UGLA

Structural and functional characterization of an anesthetic binding site in the second cysteine-rich domain of protein kinase c delta
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
65
structure length
65
Chain Sequence
GSRRASVGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFIVTD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal binding protein
source organism Mus musculus
publication title Structural and Functional Characterization of an Anesthetic Binding Site in the Second Cysteine-Rich Domain of Protein Kinase Cdelta
pubmed doi rcsb
molecule keywords Proteine kinase C delta type
total genus 11
structure length 65
sequence length 65
chains with identical sequence B
ec nomenclature ec 2.7.10.2: Non-specific protein-tyrosine kinase.
pdb deposition date 2011-11-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3uglA01
1KBFA 3UGIA 3UGDA 4UXHA 1TBNA 1W4RA 4B6DA 4FKDA 1XX6A 1KBEA 3UEJA 2ELIA 2GVIA 1RFHA 1R79A 1FAQA 2QQ0A 2ENNA 2DB6A 2B8TA 1PTRA 4UXIA 2ENZA 3UGLA 1XA6A 5FUVA 1PTQA 2ROWA 4L9MA 2YUUA 1XBTA 5FUWA 3UFFA 2J87A 4UXJA 2ORVA 3CXLA 2UZ3A 3KY9A 5FUYA 1Y8FA 2ORWA 1FARA 2J9RA 3UEYA 5FUXA 2QQEA 2VRWB 3E2IA 1TBOA 2WVJA 2JA1A 2QPOA 2E73A 3BJIA 2FNFX
chains in the Genus database with same CATH superfamily
1KBFA 1IW4A 1ULNA 1VDDA 3UGDA 4UXHA 5CCLA 2ARPF 1UVFA 5EX3A 1SGYI 1TURA 1KBEA 5E3QA 3SGBI 2ELIA 1DS2I 2V53A 1BUSA 3QTLD 1H0ZA 2B8TA 2K9HA 2CJSC 1ULMA 1BMOA 2GKRI 2BUSA 5JHWC 5FUVA 2JW6A 2L7XA 4E1RA 1SGPI 2N17A 1TGSI 5CCMA 3FSYA 3QAHA 2RC4A 1UHAA 2J9RA 1SGQI 1AN1I 1V1HA 1NUBA 1SGRI 2N52A 2SGFI 3E2IA 4GI3C 1WTJA 2QPOA 2OZUA 1NXUA 2FNFX 3BJIA 2V1CC 3RU0A 1CT0I 1SGEI 4DNCA 2ODDA 3UGIA 2GKVA 1MT1A 2KMPA 5HQ8A 1DS3I 3GOXA 2CWHA 4FKDA 4JCVE 1XX6A 5E3PA 1M8CA 3TO9A 7WGAA 1HDLA 3E59A 3UEJA 1X4SA 1SGDI 1WGCA 3VDPA 1HEVA 1LR7A 2KMOA 2N71A 2QQ0A 2YQPA 2WCYA 2NU1I 2RIJA 3B4VC 1CE3A 1CSOI 2F3CI 1K7TA 2ENZA 2SGDI 2Y0MA 3UGLA 3MEKA 3TJQA 1CGJI 1SGNI 2NU4I 4L9MA 3HH2C 2J87A 1S20A 2ORVA 4SGBI 2UVOA 1P9GA 1UVGA 3R5DA 1PJUA 1Y8FA 1WKXA 5HI7A 5DAEA 1CHOI 1CT2I 2OD1A 3UOEA 2QQCA 1TBOA 2CWFA 3OVOA 2OVOA 1OMUA 2A20A 2SGPI 1TBRR 2OU2A 5EX0A 1TBNA 1ULKA 1W4RA 5J8FA 3VDUA 1FY7A 1N13A 2LUYA 1TIHA 1V1IA 1IY5A 2GVIA 1UUCA 2GKTI 2W0TA 3R5BA 3VE5A 3D00A 1PPFI 4A24A 2NU0I 1R79A 2M5XA 2WGCA 2ENNA 4UXIA 1MJAA 3SGQI 1HPTA 1HJAI 1XA6A 2DIPA 1PTQA 5J8CA 2ROWA 3TO7A 3UFFA 4UXJA 1TUSA 1TOTA 5E3RA 3R5CA 3OXFA 4E1PA 1IY6A 2LEOA 1K7UA 3KY9A 1R0RI 1CT4I 1MJBA 3OXGA 5FUYA 2QQEA 4AMLA 2WVJA 1U5KA 2KMRA 1WGTA 1Y1CA 1OVOA 1PCEA 3UEYA 2X3TA 3QWPA 1KMAA 1OYVI 2NU2I 3OL0A 4B6DA 1Q9BA 2V1CA 2JZMA 2X52A 2XRCA 9WGAA 2N1AB 4HGUA 2PQ8A 4OVOA 3FC3A 1TBQR 1FYBA 1RFHA 1FAQA 3FSXA 1CGII 1Y1BA 2DB6A 1P9ZA 1PTRA 1W3SA 1M8BA 3SEKC 2E5RA 1Z7KB 2KMQA 1OMTA 2JYYA 2DKVA 2NU3I 2YUUA 1XBTA 2QQDA 5FUWA 2JXDA 3PDNA 2KCXA 1LR8A 2SGQI 3TOAA 3OXLA 3TOBA 1YU6C 3CXLA 2L8EA 2LB7A 2UZ3A 2SGEI 4WP4A 2ORWA 2B0UC 1MJ9A 1FARA 1YTPA 1X74A 2CWGA 2P6AC 1K7VA 2VRWB 1LR9A 2GIVA 3R5AA 4MPIA 2JA1A 5FUXA 3TO6A 2E73A 2ERWA 1Z2IA
chains in the Genus database with same CATH topology
1KBFA 1IW4A 1VDDA 3UGDA 4UXHA 5CCLA 2ARPF 1UVFA 5EX3A 1SGYI 1TURA 1KBEA 3SGBI 2ELIA 1DS2I 2V53A 1BUSA 3QTLD 1H0ZA 2B8TA 2K9HA 2CJSC 1BMOA 2GKRI 2BUSA 5JHWC 5FUVA 2JW6A 2L7XA 4E1RA 1SGPI 2N17A 1TGSI 5CCMA 2J9RA 1SGQI 1AN1I 1V1HA 1NUBA 1SGRI 2N52A 2SGFI 3E2IA 4GI3C 2QPOA 3BJIA 2FNFX 2V1CC 3RU0A 1CT0I 1SGEI 2ODDA 3UGIA 2GKVA 1MT1A 2KMPA 5HQ8A 1DS3I 3GOXA 4FKDA 1HDLA 4JCVE 1XX6A 1M8CA 3E59A 3UEJA 1X4SA 1SGDI 3VDPA 1LR7A 2KMOA 2N71A 2QQ0A 2YQPA 2WCYA 2NU1I 3B4VC 1CE3A 1CSOI 2F3CI 2ENZA 2SGDI 3UGLA 3MEKA 3TJQA 1CGJI 1SGNI 2NU4I 4L9MA 3HH2C 2J87A 2ORVA 4SGBI 1UVGA 1PJUA 1Y8FA 5HI7A 5DAEA 1CHOI 1CT2I 2OD1A 2QQCA 1TBOA 3OVOA 2OVOA 1OMUA 2A20A 2SGPI 1TBRR 5EX0A 1TBNA 1W4RA 3VDUA 2LUYA 1N13A 1TIHA 1V1IA 1IY5A 2GVIA 1UUCA 2GKTI 2W0TA 3VE5A 4A24A 3D00A 1PPFI 2NU0I 1R79A 2M5XA 2ENNA 4UXIA 3SGQI 1HPTA 1HJAI 1XA6A 2DIPA 1PTQA 2ROWA 3UFFA 4UXJA 1TUSA 1TOTA 3OXFA 4E1PA 1IY6A 2LEOA 3KY9A 5FUYA 1R0RI 1CT4I 3OXGA 2QQEA 2WVJA 1U5KA 2KMRA 1Y1CA 1OVOA 1PCEA 1KMAA 1OYVI 2NU2I 3OL0A 4B6DA 2V1CA 2JZMA 2XRCA 2N1AB 4HGUA 4OVOA 3FC3A 1TBQR 1FYBA 1RFHA 1FAQA 1CGII 1Y1BA 2DB6A 1PTRA 1W3SA 1M8BA 3SEKC 2E5RA 1Z7KB 2KMQA 1OMTA 2JYYA 2NU3I 2YUUA 1XBTA 2QQDA 5FUWA 2JXDA 3PDNA 2KCXA 1LR8A 2SGQI 3OXLA 1YU6C 3CXLA 2L8EA 2UZ3A 2SGEI 2ORWA 2B0UC 2P6AC 1YTPA 1FARA 1X74A 3QWPA 5FUXA 2VRWB 3UEYA 1LR9A 2JA1A 2E73A 2ERWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KBF A;  3UGI A;  3UGD A;  4UXH A;  1TBN A;  1W4R A;  4B6D A;  4FKD A;  1XX6 A;  1KBE A;  3UEJ A;  2ELI A;  2GVI A;  1RFH A;  1R79 A;  1FAQ A;  2QQ0 A;  2ENN A;  2DB6 A;  2B8T A;  1PTR A;  4UXI A;  2ENZ A;  3UGL A;  1XA6 A;  5FUV A;  1PTQ A;  2ROW A;  4L9M A;  2YUU A;  1XBT A;  5FUW A;  3UFF A;  2J87 A;  4UXJ A;  2ORV A;  3CXL A;  2UZ3 A;  3KY9 A;  5FUY A;  1Y8F A;  2ORW A;  1FAR A;  2J9R A;  3UEY A;  5FUX A;  2QQE A;  2VRW B;  3E2I A;  1TBO A;  2WVJ A;  2JA1 A;  2QPO A;  2E73 A;  3BJI A;  2FNF X; 
#chains in the Genus database with same CATH topology
 1KBF A;  1IW4 A;  1ULN A;  1VDD A;  3UGD A;  4UXH A;  5CCL A;  2ARP F;  1UVF A;  5EX3 A;  1SGY I;  1TUR A;  1KBE A;  5E3Q A;  3SGB I;  2ELI A;  1DS2 I;  2V53 A;  1BUS A;  3QTL D;  1H0Z A;  2B8T A;  2K9H A;  2CJS C;  1ULM A;  1BMO A;  2GKR I;  2BUS A;  5JHW C;  5FUV A;  2JW6 A;  2L7X A;  4E1R A;  1SGP I;  2N17 A;  1TGS I;  5CCM A;  3FSY A;  3QAH A;  2RC4 A;  1UHA A;  2J9R A;  1SGQ I;  1AN1 I;  1V1H A;  1NUB A;  1SGR I;  2N52 A;  2SGF I;  3E2I A;  4GI3 C;  1WTJ A;  2QPO A;  2OZU A;  1NXU A;  2FNF X;  3BJI A;  2V1C C;  3RU0 A;  1CT0 I;  1SGE I;  4DNC A;  2ODD A;  3UGI A;  2GKV A;  1MT1 A;  2KMP A;  5HQ8 A;  1DS3 I;  3GOX A;  2CWH A;  4FKD A;  4JCV E;  1XX6 A;  5E3P A;  1M8C A;  3TO9 A;  7WGA A;  1HDL A;  3E59 A;  3UEJ A;  1X4S A;  1SGD I;  1WGC A;  3VDP A;  1HEV A;  1LR7 A;  2KMO A;  2N71 A;  2QQ0 A;  2YQP A;  2WCY A;  2NU1 I;  2RIJ A;  3B4V C;  1CE3 A;  1CSO I;  2F3C I;  1K7T A;  2ENZ A;  2SGD I;  2Y0M A;  3UGL A;  3MEK A;  3TJQ A;  1CGJ I;  1SGN I;  2NU4 I;  4L9M A;  3HH2 C;  2J87 A;  1S20 A;  2ORV A;  4SGB I;  2UVO A;  1P9G A;  1UVG A;  3R5D A;  1PJU A;  1Y8F A;  1WKX A;  5HI7 A;  5DAE A;  1CHO I;  1CT2 I;  2OD1 A;  3UOE A;  2QQC A;  1TBO A;  2CWF A;  3OVO A;  2OVO A;  1OMU A;  2A20 A;  2SGP I;  1TBR R;  2OU2 A;  5EX0 A;  1TBN A;  1ULK A;  1W4R A;  5J8F A;  3VDU A;  1FY7 A;  1N13 A;  2LUY A;  1TIH A;  1V1I A;  1IY5 A;  2GVI A;  1UUC A;  2GKT I;  2W0T A;  3R5B A;  3VE5 A;  3D00 A;  1PPF I;  4A24 A;  2NU0 I;  1R79 A;  2M5X A;  2WGC A;  2ENN A;  4UXI A;  1MJA A;  3SGQ I;  1HPT A;  1HJA I;  1XA6 A;  2DIP A;  1PTQ A;  5J8C A;  2ROW A;  3TO7 A;  3UFF A;  4UXJ A;  1TUS A;  1TOT A;  5E3R A;  3R5C A;  3OXF A;  4E1P A;  1IY6 A;  2LEO A;  1K7U A;  3KY9 A;  1R0R I;  1CT4 I;  1MJB A;  3OXG A;  5FUY A;  2QQE A;  4AML A;  2WVJ A;  1U5K A;  2KMR A;  1WGT A;  1Y1C A;  1OVO A;  1PCE A;  3UEY A;  2X3T A;  3QWP A;  1KMA A;  1OYV I;  2NU2 I;  3OL0 A;  4B6D A;  1Q9B A;  2V1C A;  2JZM A;  2X52 A;  2XRC A;  9WGA A;  2N1A B;  4HGU A;  2PQ8 A;  4OVO A;  3FC3 A;  1TBQ R;  1FYB A;  1RFH A;  1FAQ A;  3FSX A;  1CGI I;  1Y1B A;  2DB6 A;  1P9Z A;  1PTR A;  1W3S A;  1M8B A;  3SEK C;  2E5R A;  1Z7K B;  2KMQ A;  1OMT A;  2JYY A;  2DKV A;  2NU3 I;  2YUU A;  1XBT A;  2QQD A;  5FUW A;  2JXD A;  3PDN A;  2KCX A;  1LR8 A;  2SGQ I;  3TOA A;  3OXL A;  3TOB A;  1YU6 C;  3CXL A;  2L8E A;  2LB7 A;  2UZ3 A;  2SGE I;  4WP4 A;  2ORW A;  2B0U C;  1MJ9 A;  1FAR A;  1YTP A;  1X74 A;  2CWG A;  2P6A C;  1K7V A;  2VRW B;  1LR9 A;  2GIV A;  3R5A A;  4MPI A;  2JA1 A;  5FUX A;  3TO6 A;  2E73 A;  2ERW A;  1Z2I A; 
#chains in the Genus database with same CATH homology
 1KBF A;  1IW4 A;  1VDD A;  3UGD A;  4UXH A;  5CCL A;  2ARP F;  1UVF A;  5EX3 A;  1SGY I;  1TUR A;  1KBE A;  3SGB I;  2ELI A;  1DS2 I;  2V53 A;  1BUS A;  3QTL D;  1H0Z A;  2B8T A;  2K9H A;  2CJS C;  1BMO A;  2GKR I;  2BUS A;  5JHW C;  5FUV A;  2JW6 A;  2L7X A;  4E1R A;  1SGP I;  2N17 A;  1TGS I;  5CCM A;  2J9R A;  1SGQ I;  1AN1 I;  1V1H A;  1NUB A;  1SGR I;  2N52 A;  2SGF I;  3E2I A;  4GI3 C;  2QPO A;  3BJI A;  2FNF X;  2V1C C;  3RU0 A;  1CT0 I;  1SGE I;  2ODD A;  3UGI A;  2GKV A;  1MT1 A;  2KMP A;  5HQ8 A;  1DS3 I;  3GOX A;  4FKD A;  1HDL A;  4JCV E;  1XX6 A;  1M8C A;  3E59 A;  3UEJ A;  1X4S A;  1SGD I;  3VDP A;  1LR7 A;  2KMO A;  2N71 A;  2QQ0 A;  2YQP A;  2WCY A;  2NU1 I;  3B4V C;  1CE3 A;  1CSO I;  2F3C I;  2ENZ A;  2SGD I;  3UGL A;  3MEK A;  3TJQ A;  1CGJ I;  1SGN I;  2NU4 I;  4L9M A;  3HH2 C;  2J87 A;  2ORV A;  4SGB I;  1UVG A;  1PJU A;  1Y8F A;  5HI7 A;  5DAE A;  1CHO I;  1CT2 I;  2OD1 A;  2QQC A;  1TBO A;  3OVO A;  2OVO A;  1OMU A;  2A20 A;  2SGP I;  1TBR R;  5EX0 A;  1TBN A;  1W4R A;  3VDU A;  2LUY A;  1N13 A;  1TIH A;  1V1I A;  1IY5 A;  2GVI A;  1UUC A;  2GKT I;  2W0T A;  3VE5 A;  4A24 A;  3D00 A;  1PPF I;  2NU0 I;  1R79 A;  2M5X A;  2ENN A;  4UXI A;  3SGQ I;  1HPT A;  1HJA I;  1XA6 A;  2DIP A;  1PTQ A;  2ROW A;  3UFF A;  4UXJ A;  1TUS A;  1TOT A;  3OXF A;  4E1P A;  1IY6 A;  2LEO A;  3KY9 A;  5FUY A;  1R0R I;  1CT4 I;  3OXG A;  2QQE A;  2WVJ A;  1U5K A;  2KMR A;  1Y1C A;  1OVO A;  1PCE A;  1KMA A;  1OYV I;  2NU2 I;  3OL0 A;  4B6D A;  2V1C A;  2JZM A;  2XRC A;  2N1A B;  4HGU A;  4OVO A;  3FC3 A;  1TBQ R;  1FYB A;  1RFH A;  1FAQ A;  1CGI I;  1Y1B A;  2DB6 A;  1PTR A;  1W3S A;  1M8B A;  3SEK C;  2E5R A;  1Z7K B;  2KMQ A;  1OMT A;  2JYY A;  2NU3 I;  2YUU A;  1XBT A;  2QQD A;  5FUW A;  2JXD A;  3PDN A;  2KCX A;  1LR8 A;  2SGQ I;  3OXL A;  1YU6 C;  3CXL A;  2L8E A;  2UZ3 A;  2SGE I;  2ORW A;  2B0U C;  2P6A C;  1YTP A;  1FAR A;  1X74 A;  3QWP A;  5FUX A;  2VRW B;  3UEY A;  1LR9 A;  2JA1 A;  2E73 A;  2ERW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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