2UVOA

High resolution crystal structure of wheat germ agglutinin in complex with n-acetyl-d-glucosamine
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
170
structure length
170
Chain Sequence
b'ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCD'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords AGGLUTININ ISOLECTIN 1
publication title Structural Basis of Multivalent Binding to Wheat Germ Agglutinin.
pubmed doi rcsb
molecule tags Carbohydrate-binding protein
total genus 51
structure length 170
sequence length 170
chains with identical sequence B, E, F
ec nomenclature
pdb deposition date 2007-03-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA01
2WGCA 1P9ZA 2DKVA 2LB7A 4MPIA 9WGAA 1WGCA 1P9GA 7WGAA 1ULNA 1WKXA 4WP4A 1K7VA 1K7UA 1UHAA 1HEVA 2X52A 1K7TA 1ULKA 2X3TA 1Q9BA 2UVOA 4AMLA 2CWGA 1ULMA 1WGTA
chains in the Genus database with same CATH superfamily
2E5RA 2ORWA 2KMRA 2UZ3A 4E1RA 2RC4A 2CWHA 2SGEI 3SEKC 2QQDA 5E3PA 3TO9A 1KMAA 1RFHA 4B6DA 1UUCA 2SGQI 3VDUA 1H0ZA 4WP4A 2ENZA 3OXFA 1CHOI 2NU2I 2F3CI 1FY7A 1HEVA 3UOEA 2OVOA 3HH2C 3OXLA 1X4SA 2J87A 2P6AC 1ULKA 2QPOA 4GI3C 2X3TA 2JZMA 2QQEA 1Y1BA 2BUSA 1R79A 3E59A 1TURA 3FC3A 1OMTA 1PJUA 1IW4A 5FUVA 3UFFA 2N71A 3SGBI 1Y8FA 2V53A 1HJAI 4E1PA 1R0RI 2M5XA 3OVOA 2A20A 2NU4I 4UXJA 1CT0I 1K7UA 1IY6A 5JHWC 2ROWA 1TBOA 1CE3A 1PPFI 2YQPA 1LR9A 1P9ZA 1XX6A 2V1CC 1LR7A 3TOAA 1SGQI 1ULNA 3QTLD 4A24A 1FARA 2JA1A 2CWFA 1Y1CA 3RU0A 2XRCA 1IY5A 1FAQA 1WKXA 3SGQI 2NU3I 1K7VA 1XA6A 3FSXA 1YTPA 2N52A 2ORVA 4UXIA 5E3RA 2CJSC 1LR8A 1SGEI 2SGDI 2SGPI 1Q9BA 3TJQA 5J8CA 2UVOA 5FUYA 2W0TA 1TBQR 4HGUA 3VDPA 3OXGA 1NUBA 1TIHA 2JYYA 2WCYA 1OYVI 3B4VC 1NXUA 1BMOA 1PTRA 2DIPA 2J9RA 4AMLA 2DB6A 3BJIA 1M8BA 1DS2I 1KBEA 1S20A 1Z7KB 3E2IA 1OVOA 2ARPF 2QQCA 1UVFA 5FUXA 2YUUA 5J8FA 2OU2A 1MT1A 2SGFI 3TO6A 1SGNI 2LB7A 1TBNA 2E73A 5DAEA 1WGCA 7WGAA 1W3SA 1SGPI 3R5BA 2GKTI 3KY9A 2FNFX 4OVOA 2GKRI 3R5CA 2GVIA 3MEKA 1UHAA 1DS3I 4L9MA 2X52A 1K7TA 2LUYA 3GOXA 3QWPA 2VRWB 3UGLA 1TOTA 5CCLA 1TGSI 3R5AA 2PQ8A 2N17A 5FUWA 1BUSA 2N1AB 2KMPA 3D00A 2NU0I 1PTQA 5E3QA 1U5KA 1CGJI 4JCVE 2OD1A 1CT2I 1V1IA 2K9HA 2CWGA 2QQ0A 2L8EA 3FSYA 5EX0A 1TBRR 5HI7A 1UVGA 3VE5A 1HDLA 5CCMA 3UEJA 1WGTA 1SGDI 2ERWA 1SGYI 1TUSA 2LEOA 2WGCA 3UEYA 2JXDA 2B8TA 2B0UC 2V1CA 2DKVA 2WVJA 4MPIA 9WGAA 1KBFA 3PDNA 3TO7A 1P9GA 2L7XA 2JW6A 1PCEA 1YU6C 1V1HA 1VDDA 2Y0MA 3R5DA 5HQ8A 3TOBA 4SGBI 2RIJA 3CXLA 1M8CA 1X74A 1XBTA 1N13A 1CSOI 1CT4I 2KMOA 2NU1I 3QAHA 1W4RA 1FYBA 1OMUA 2KCXA 1WTJA 5EX3A 1HPTA 1MJAA 4UXHA 1MJBA 2GIVA 1MJ9A 1SGRI 3UGIA 4DNCA 3OL0A 2OZUA 1AN1I 2GKVA 4FKDA 1CGII 1ULMA 3UGDA 2ENNA 2KMQA 1Z2IA 2ODDA 2ELIA
chains in the Genus database with same CATH topology
2WGCA 1P9ZA 2DKVA 2LB7A 4MPIA 9WGAA 1WGCA 1P9GA 7WGAA 1ULNA 1WKXA 4WP4A 1K7VA 1K7UA 1UHAA 1HEVA 2X52A 1K7TA 1ULKA 2X3TA 1Q9BA 2UVOA 4AMLA 2CWGA 1ULMA 1WGTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WGC A;  1P9Z A;  2DKV A;  2LB7 A;  4MPI A;  9WGA A;  1WGC A;  1P9G A;  7WGA A;  1ULN A;  1WKX A;  4WP4 A;  1K7V A;  1K7U A;  1UHA A;  1HEV A;  2X52 A;  1K7T A;  1ULK A;  2X3T A;  1Q9B A;  2UVO A;  4AML A;  2CWG A;  1ULM A;  1WGT A; 
#chains in the Genus database with same CATH topology
 2E5R A;  2ORW A;  2KMR A;  2UZ3 A;  4E1R A;  2RC4 A;  2CWH A;  2SGE I;  3SEK C;  2QQD A;  5E3P A;  3TO9 A;  1KMA A;  1RFH A;  4B6D A;  1UUC A;  2SGQ I;  3VDU A;  1H0Z A;  4WP4 A;  2ENZ A;  3OXF A;  1CHO I;  2NU2 I;  2F3C I;  1FY7 A;  1HEV A;  3UOE A;  2OVO A;  3HH2 C;  3OXL A;  1X4S A;  2J87 A;  2P6A C;  1ULK A;  2QPO A;  4GI3 C;  2X3T A;  2JZM A;  2QQE A;  1Y1B A;  2BUS A;  1R79 A;  3E59 A;  1TUR A;  3FC3 A;  1OMT A;  1PJU A;  1IW4 A;  5FUV A;  3UFF A;  2N71 A;  3SGB I;  1Y8F A;  2V53 A;  1HJA I;  4E1P A;  1R0R I;  2M5X A;  3OVO A;  2A20 A;  2NU4 I;  4UXJ A;  1CT0 I;  1K7U A;  1IY6 A;  5JHW C;  2ROW A;  1TBO A;  1CE3 A;  1PPF I;  2YQP A;  1LR9 A;  1P9Z A;  1XX6 A;  2V1C C;  1LR7 A;  3TOA A;  1SGQ I;  1ULN A;  3QTL D;  4A24 A;  1FAR A;  2JA1 A;  2CWF A;  1Y1C A;  3RU0 A;  2XRC A;  1IY5 A;  1FAQ A;  1WKX A;  3SGQ I;  2NU3 I;  1K7V A;  1XA6 A;  3FSX A;  1YTP A;  2N52 A;  2ORV A;  4UXI A;  5E3R A;  2CJS C;  1LR8 A;  1SGE I;  2SGD I;  2SGP I;  1Q9B A;  3TJQ A;  5J8C A;  2UVO A;  5FUY A;  2W0T A;  1TBQ R;  4HGU A;  3VDP A;  3OXG A;  1NUB A;  1TIH A;  2JYY A;  2WCY A;  1OYV I;  3B4V C;  1NXU A;  1BMO A;  1PTR A;  2DIP A;  2J9R A;  4AML A;  2DB6 A;  3BJI A;  1M8B A;  1DS2 I;  1KBE A;  1S20 A;  1Z7K B;  3E2I A;  1OVO A;  2ARP F;  2QQC A;  1UVF A;  5FUX A;  2YUU A;  5J8F A;  2OU2 A;  1MT1 A;  2SGF I;  3TO6 A;  1SGN I;  2LB7 A;  1TBN A;  2E73 A;  5DAE A;  1WGC A;  7WGA A;  1W3S A;  1SGP I;  3R5B A;  2GKT I;  3KY9 A;  2FNF X;  4OVO A;  2GKR I;  3R5C A;  2GVI A;  3MEK A;  1UHA A;  1DS3 I;  4L9M A;  2X52 A;  1K7T A;  2LUY A;  3GOX A;  3QWP A;  2VRW B;  3UGL A;  1TOT A;  5CCL A;  1TGS I;  3R5A A;  2PQ8 A;  2N17 A;  5FUW A;  1BUS A;  2N1A B;  2KMP A;  3D00 A;  2NU0 I;  1PTQ A;  5E3Q A;  1U5K A;  1CGJ I;  4JCV E;  2OD1 A;  1CT2 I;  1V1I A;  2K9H A;  2CWG A;  2QQ0 A;  2L8E A;  3FSY A;  5EX0 A;  1TBR R;  5HI7 A;  1UVG A;  3VE5 A;  1HDL A;  5CCM A;  3UEJ A;  1WGT A;  1SGD I;  2ERW A;  1SGY I;  1TUS A;  2LEO A;  2WGC A;  3UEY A;  2JXD A;  2B8T A;  2B0U C;  2V1C A;  2DKV A;  2WVJ A;  4MPI A;  9WGA A;  1KBF A;  3PDN A;  3TO7 A;  1P9G A;  2L7X A;  2JW6 A;  1PCE A;  1YU6 C;  1V1H A;  1VDD A;  2Y0M A;  3R5D A;  5HQ8 A;  3TOB A;  4SGB I;  2RIJ A;  3CXL A;  1M8C A;  1X74 A;  1XBT A;  1N13 A;  1CSO I;  1CT4 I;  2KMO A;  2NU1 I;  3QAH A;  1W4R A;  1FYB A;  1OMU A;  2KCX A;  1WTJ A;  5EX3 A;  1HPT A;  1MJA A;  4UXH A;  1MJB A;  2GIV A;  1MJ9 A;  1SGR I;  3UGI A;  4DNC A;  3OL0 A;  2OZU A;  1AN1 I;  2GKV A;  4FKD A;  1CGI I;  1ULM A;  3UGD A;  2ENN A;  2KMQ A;  1Z2I A;  2ODD A;  2ELI A; 
#chains in the Genus database with same CATH homology
 2WGC A;  1P9Z A;  2DKV A;  2LB7 A;  4MPI A;  9WGA A;  1WGC A;  1P9G A;  7WGA A;  1ULN A;  1WKX A;  4WP4 A;  1K7V A;  1K7U A;  1UHA A;  1HEV A;  2X52 A;  1K7T A;  1ULK A;  2X3T A;  1Q9B A;  2UVO A;  4AML A;  2CWG A;  1ULM A;  1WGT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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