2UVOA

High resolution crystal structure of wheat germ agglutinin in complex with n-acetyl-d-glucosamine
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
170
structure length
170
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Basis of Multivalent Binding to Wheat Germ Agglutinin.
pubmed doi rcsb
molecule tags Carbohydrate-binding protein
molecule keywords AGGLUTININ ISOLECTIN 1
total genus 51
structure length 170
sequence length 170
chains with identical sequence B, E, F
ec nomenclature
pdb deposition date 2007-03-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2uvoA01
1ULMA 2UVOA 1UHAA 1K7UA 2X3TA 9WGAA 1HEVA 2X52A 7WGAA 2CWGA 4AMLA 1K7VA 1K7TA 4MPIA 1P9ZA 1Q9BA 2DKVA 1ULNA 2LB7A 1WKXA 1WGTA 1WGCA 2WGCA 1P9GA 1ULKA 4WP4A
chains in the Genus database with same CATH superfamily
1FYBA 1FY7A 2L7XA 1MJBA 1LR9A 2CWHA 1TIHA 2M5XA 1YU6C 2N71A 1CGJI 5JHWC 1TOTA 2V1CA 1CT0I 2ENNA 2PQ8A 3VE5A 2CJSC 1RFHA 1TBOA 3SGBI 2B8TA 1SGDI 2N17A 3E59A 3SGQI 1X74A 4DNCA 3E2IA 2F3CI 1Y8FA 1K7TA 2SGEI 3UFFA 1OMUA 1P9ZA 2ARPF 1UUCA 2J87A 1TBNA 2OD1A 2RC4A 2WVJA 1LR7A 2L8EA 2QPOA 1PCEA 2QQDA 1WGCA 1VDDA 3R5BA 3TOAA 2OZUA 3UGLA 2B0UC 3TO6A 3BJIA 4HGUA 3CXLA 4E1PA 1TGSI 2RIJA 1UVGA 3FSYA 3TO7A 2QQ0A 1W4RA 3OXFA 2KMOA 2X3TA 5E3PA 4E1RA 1OMTA 2NU1I 3OVOA 1SGQI 1R79A 1PPFI 2CWGA 1XA6A 1R0RI 2V1CC 2W0TA 2GVIA 5DAEA 5CCMA 1CT2I 1FAQA 5HI7A 1BMOA 4FKDA 1OYVI 3VDPA 2OVOA 3R5DA 2LUYA 3UEJA 3TOBA 1HPTA 1DS2I 2DIPA 5FUXA 1CT4I 1TBRR 1V1IA 1YTPA 2KCXA 3UOEA 3KY9A 2N52A 2XRCA 2WCYA 1ULNA 2LB7A 2N1AB 1IW4A 1HJAI 1Y1BA 1IY6A 2JXDA 3RU0A 1P9GA 4WP4A 5EX0A 2E5RA 1XBTA 2NU4I 1W3SA 3QAHA 4UXJA 1U5KA 1HDLA 1Z7KB 1SGYI 2Y0MA 2UVOA 1CSOI 1SGEI 2KMQA 2QQEA 3TO9A 1UHAA 4UXHA 1TURA 5CCLA 1LR8A 9WGAA 2VRWB 1TBQR 1M8CA 1S20A 2KMPA 1FARA 2X52A 3PDNA 3UEYA 1IY5A 7WGAA 2NU2I 3FSXA 1CGII 1N13A 3D00A 1SGRI 3HH2C 1H0ZA 4AMLA 1DS3I 1M8BA 2K9HA 3GOXA 2JW6A 3QWPA 5FUWA 2YUUA 3FC3A 2JZMA 2JA1A 2SGFI 2ERWA 2ELIA 3QTLD 2YQPA 3VDUA 3UGDA 3B4VC 3SEKC 1NXUA 5J8FA 1MT1A 5E3QA 1WKXA 2GKRI 1WGTA 1SGPI 2P6AC 3R5CA 3TJQA 5EX3A 1ULKA 2ODDA 2V53A 2ROWA 1CE3A 2E73A 4OVOA 1ULMA 2UZ3A 1MJAA 3OXGA 5HQ8A 1V1HA 4GI3C 1TUSA 2QQCA 2OU2A 1K7UA 4SGBI 1HEVA 3MEKA 2CWFA 2GKVA 2SGPI 1WTJA 4A24A 5FUVA 1BUSA 2SGDI 2LEOA 5E3RA 1K7VA 1KBEA 1NUBA 2NU0I 1AN1I 1Y1CA 2A20A 2ENZA 3UGIA 2ORVA 3OXLA 1CHOI 1UVFA 2BUSA 4UXIA 1PJUA 1PTQA 3OL0A 2KMRA 3R5AA 2J9RA 2FNFX 1Q9BA 2DKVA 2GKTI 4MPIA 1SGNI 2GIVA 2DB6A 1PTRA 1Z2IA 2SGQI 2WGCA 1KBFA 1X4SA 5J8CA 1OVOA 1XX6A 2NU3I 4L9MA 1KMAA 4JCVE 1MJ9A 2JYYA 5FUYA 4B6DA 2ORWA
chains in the Genus database with same CATH topology
1ULMA 2UVOA 1UHAA 1K7UA 2X3TA 9WGAA 1HEVA 2X52A 7WGAA 2CWGA 4AMLA 1K7VA 1K7TA 4MPIA 1P9ZA 1Q9BA 2DKVA 1ULNA 2LB7A 1WKXA 1WGTA 1WGCA 2WGCA 1P9GA 1ULKA 4WP4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ULM A;  2UVO A;  1UHA A;  1K7U A;  2X3T A;  9WGA A;  1HEV A;  2X52 A;  7WGA A;  2CWG A;  4AML A;  1K7V A;  1K7T A;  4MPI A;  1P9Z A;  1Q9B A;  2DKV A;  1ULN A;  2LB7 A;  1WKX A;  1WGT A;  1WGC A;  2WGC A;  1P9G A;  1ULK A;  4WP4 A; 
#chains in the Genus database with same CATH topology
 1FYB A;  1FY7 A;  2L7X A;  1MJB A;  1LR9 A;  2CWH A;  1TIH A;  2M5X A;  1YU6 C;  2N71 A;  1CGJ I;  5JHW C;  1TOT A;  2V1C A;  1CT0 I;  2ENN A;  2PQ8 A;  3VE5 A;  2CJS C;  1RFH A;  1TBO A;  3SGB I;  2B8T A;  1SGD I;  2N17 A;  3E59 A;  3SGQ I;  1X74 A;  4DNC A;  3E2I A;  2F3C I;  1Y8F A;  1K7T A;  2SGE I;  3UFF A;  1OMU A;  1P9Z A;  2ARP F;  1UUC A;  2J87 A;  1TBN A;  2OD1 A;  2RC4 A;  2WVJ A;  1LR7 A;  2L8E A;  2QPO A;  1PCE A;  2QQD A;  1WGC A;  1VDD A;  3R5B A;  3TOA A;  2OZU A;  3UGL A;  2B0U C;  3TO6 A;  3BJI A;  4HGU A;  3CXL A;  4E1P A;  1TGS I;  2RIJ A;  1UVG A;  3FSY A;  3TO7 A;  2QQ0 A;  1W4R A;  3OXF A;  2KMO A;  2X3T A;  5E3P A;  4E1R A;  1OMT A;  2NU1 I;  3OVO A;  1SGQ I;  1R79 A;  1PPF I;  2CWG A;  1XA6 A;  1R0R I;  2V1C C;  2W0T A;  2GVI A;  5DAE A;  5CCM A;  1CT2 I;  1FAQ A;  5HI7 A;  1BMO A;  4FKD A;  1OYV I;  3VDP A;  2OVO A;  3R5D A;  2LUY A;  3UEJ A;  3TOB A;  1HPT A;  1DS2 I;  2DIP A;  5FUX A;  1CT4 I;  1TBR R;  1V1I A;  1YTP A;  2KCX A;  3UOE A;  3KY9 A;  2N52 A;  2XRC A;  2WCY A;  1ULN A;  2LB7 A;  2N1A B;  1IW4 A;  1HJA I;  1Y1B A;  1IY6 A;  2JXD A;  3RU0 A;  1P9G A;  4WP4 A;  5EX0 A;  2E5R A;  1XBT A;  2NU4 I;  1W3S A;  3QAH A;  4UXJ A;  1U5K A;  1HDL A;  1Z7K B;  1SGY I;  2Y0M A;  2UVO A;  1CSO I;  1SGE I;  2KMQ A;  2QQE A;  3TO9 A;  1UHA A;  4UXH A;  1TUR A;  5CCL A;  1LR8 A;  9WGA A;  2VRW B;  1TBQ R;  1M8C A;  1S20 A;  2KMP A;  1FAR A;  2X52 A;  3PDN A;  3UEY A;  1IY5 A;  7WGA A;  2NU2 I;  3FSX A;  1CGI I;  1N13 A;  3D00 A;  1SGR I;  3HH2 C;  1H0Z A;  4AML A;  1DS3 I;  1M8B A;  2K9H A;  3GOX A;  2JW6 A;  3QWP A;  5FUW A;  2YUU A;  3FC3 A;  2JZM A;  2JA1 A;  2SGF I;  2ERW A;  2ELI A;  3QTL D;  2YQP A;  3VDU A;  3UGD A;  3B4V C;  3SEK C;  1NXU A;  5J8F A;  1MT1 A;  5E3Q A;  1WKX A;  2GKR I;  1WGT A;  1SGP I;  2P6A C;  3R5C A;  3TJQ A;  5EX3 A;  1ULK A;  2ODD A;  2V53 A;  2ROW A;  1CE3 A;  2E73 A;  4OVO A;  1ULM A;  2UZ3 A;  1MJA A;  3OXG A;  5HQ8 A;  1V1H A;  4GI3 C;  1TUS A;  2QQC A;  2OU2 A;  1K7U A;  4SGB I;  1HEV A;  3MEK A;  2CWF A;  2GKV A;  2SGP I;  1WTJ A;  4A24 A;  5FUV A;  1BUS A;  2SGD I;  2LEO A;  5E3R A;  1K7V A;  1KBE A;  1NUB A;  2NU0 I;  1AN1 I;  1Y1C A;  2A20 A;  2ENZ A;  3UGI A;  2ORV A;  3OXL A;  1CHO I;  1UVF A;  2BUS A;  4UXI A;  1PJU A;  1PTQ A;  3OL0 A;  2KMR A;  3R5A A;  2J9R A;  2FNF X;  1Q9B A;  2DKV A;  2GKT I;  4MPI A;  1SGN I;  2GIV A;  2DB6 A;  1PTR A;  1Z2I A;  2SGQ I;  2WGC A;  1KBF A;  1X4S A;  5J8C A;  1OVO A;  1XX6 A;  2NU3 I;  4L9M A;  1KMA A;  4JCV E;  1MJ9 A;  2JYY A;  5FUY A;  4B6D A;  2ORW A; 
#chains in the Genus database with same CATH homology
 1ULM A;  2UVO A;  1UHA A;  1K7U A;  2X3T A;  9WGA A;  1HEV A;  2X52 A;  7WGA A;  2CWG A;  4AML A;  1K7V A;  1K7T A;  4MPI A;  1P9Z A;  1Q9B A;  2DKV A;  1ULN A;  2LB7 A;  1WKX A;  1WGT A;  1WGC A;  2WGC A;  1P9G A;  1ULK A;  4WP4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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