2CWGA

Crystallographic refinement and structure analysis of the complex of wheat germ agglutinin with a bivalent sialoglycopeptide from glycophorin a
Total Genus 52
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
171
structure length
171
Chain Sequence
ERCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSGGCDG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords AGGLUTININ ISOLECTIN 1 (WGA1)
publication title Crystallographic refinement and structure analysis of the complex of wheat germ agglutinin with a bivalent sialoglycopeptide from glycophorin A.
pubmed doi rcsb
molecule tags Lectin(agglutinin)
total genus 52
structure length 171
sequence length 171
chains with identical sequence B
ec nomenclature
pdb deposition date 1993-01-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00187 Chitin_bind_1 Chitin recognition protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2cwgA04
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2cwgA02
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2cwgA03
3.30.60.10 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Endochitinase-like 2cwgA01
1K7UA 4AMLA 2LB7A 1K7TA 2UVOA 1ULMA 7WGAA 2CWGA 1ULNA 1P9GA 2WGCA 1WKXA 2DKVA 2X3TA 1WGTA 2X52A 1WGCA 9WGAA 1Q9BA 1P9ZA 4MPIA 1HEVA 1K7VA 1ULKA 1UHAA 4WP4A
chains in the Genus database with same CATH superfamily
1K7UA 1Y1CA 4AMLA 3UOEA 3PDNA 2YQPA 1IY5A 7WGAA 2CWGA 1TBOA 2E73A 5EX0A 3HH2C 2KMOA 1N13A 4B6DA 1TBNA 2LEOA 2OZUA 1X74A 2NU4I 2LUYA 5J8CA 1LR7A 1WKXA 1MJ9A 1TIHA 1HPTA 3OXGA 3TJQA 1HDLA 2KMPA 5FUYA 2J9RA 1M8CA 3FC3A 1FYBA 1M8BA 2J87A 1Q9BA 9WGAA 1V1HA 2CWFA 1DS3I 3UGIA 1Y8FA 3QTLD 4L9MA 2SGDI 2ODDA 2SGEI 1OYVI 1K7VA 1MT1A 3R5AA 4E1PA 3E2IA 3UGLA 2W0TA 3UGDA 1CE3A 2LB7A 2Y0MA 4SGBI 4UXJA 5J8FA 1Z7KB 3RU0A 2A20A 2JXDA 1SGNI 3OXFA 5DAEA 1PPFI 2GVIA 2WVJA 2CJSC 1NUBA 3FSXA 3MEKA 2E5RA 2SGPI 1MJBA 4A24A 2KCXA 2N1AB 2ROWA 2X52A 1YTPA 1WGCA 5FUVA 2ELIA 2NU0I 2JZMA 2NU1I 2CWHA 3GOXA 1W4RA 3R5DA 4MPIA 1HEVA 1KMAA 3OVOA 2N17A 1CHOI 3OL0A 3SEKC 2XRCA 2YUUA 1SGDI 2ARPF 1UVFA 3KY9A 2QQEA 1UUCA 2NU3I 5E3QA 3QAHA 5FUXA 4UXIA 1CGII 1VDDA 5EX3A 1TBQR 1DS2I 1OMUA 2ORVA 2P6AC 1IY6A 2UVOA 1PJUA 1ULMA 2DB6A 2L7XA 2OVOA 2KMQA 3UFFA 1XX6A 2QQ0A 1HJAI 3VDUA 3FSYA 2UZ3A 1ULNA 1X4SA 5CCLA 2GKRI 3UEJA 4FKDA 1P9GA 2OD1A 1Y1BA 3VDPA 1XA6A 2GKVA 2PQ8A 1V1IA 2GKTI 1TBRR 3TO6A 2SGQI 2X3TA 3R5BA 1CT4I 2K9HA 4UXHA 1FARA 2ENZA 1OMTA 1W3SA 1XBTA 1OVOA 1YU6C 2WCYA 1P9ZA 1SGRI 3CXLA 1R0RI 3R5CA 2B8TA 3D00A 4E1RA 5HI7A 3TO7A 5CCMA 2M5XA 2KMRA 1FAQA 2BUSA 3B4VC 1H0ZA 2QQDA 1TOTA 1UVGA 2F3CI 1PTQA 2NU2I 2SGFI 2RC4A 3VE5A 2DIPA 1KBFA 1K7TA 3BJIA 1CT0I 2ORWA 1IW4A 3E59A 3TOAA 1TGSI 5JHWC 2L8EA 2V1CC 4DNCA 1PTRA 3OXLA 5FUWA 1Z2IA 1AN1I 5HQ8A 2JYYA 2JA1A 1SGQI 2N52A 1CGJI 2QPOA 2WGCA 2V1CA 2OU2A 5E3RA 3TOBA 1R79A 1BUSA 1U5KA 1KBEA 2DKVA 1WTJA 1WGTA 2ERWA 2QQCA 4WP4A 4HGUA 2ENNA 1BMOA 2B0UC 1LR9A 4GI3C 4OVOA 3TO9A 1NXUA 3UEYA 3SGBI 1CSOI 2JW6A 1RFHA 2V53A 1SGEI 1PCEA 2RIJA 3QWPA 2VRWB 4JCVE 1TURA 1ULKA 1SGYI 1TUSA 2FNFX 2GIVA 1FY7A 3SGQI 5E3PA 1SGPI 1CT2I 1MJAA 1UHAA 1LR8A 1S20A 2N71A
chains in the Genus database with same CATH topology
1K7UA 4AMLA 2LB7A 1K7TA 2UVOA 1ULMA 7WGAA 2CWGA 1ULNA 1P9GA 2WGCA 1WKXA 2DKVA 2X3TA 1WGTA 2X52A 1WGCA 9WGAA 1Q9BA 1P9ZA 4MPIA 1HEVA 1K7VA 1ULKA 1UHAA 4WP4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K7U A;  4AML A;  2LB7 A;  1K7T A;  2UVO A;  1ULM A;  7WGA A;  2CWG A;  1ULN A;  1P9G A;  2WGC A;  1WKX A;  2DKV A;  2X3T A;  1WGT A;  2X52 A;  1WGC A;  9WGA A;  1Q9B A;  1P9Z A;  4MPI A;  1HEV A;  1K7V A;  1ULK A;  1UHA A;  4WP4 A; 
#chains in the Genus database with same CATH topology
 1K7U A;  1Y1C A;  4AML A;  3UOE A;  3PDN A;  2YQP A;  1IY5 A;  7WGA A;  2CWG A;  1TBO A;  2E73 A;  5EX0 A;  3HH2 C;  2KMO A;  1N13 A;  4B6D A;  1TBN A;  2LEO A;  2OZU A;  1X74 A;  2NU4 I;  2LUY A;  5J8C A;  1LR7 A;  1WKX A;  1MJ9 A;  1TIH A;  1HPT A;  3OXG A;  3TJQ A;  1HDL A;  2KMP A;  5FUY A;  2J9R A;  1M8C A;  3FC3 A;  1FYB A;  1M8B A;  2J87 A;  1Q9B A;  9WGA A;  1V1H A;  2CWF A;  1DS3 I;  3UGI A;  1Y8F A;  3QTL D;  4L9M A;  2SGD I;  2ODD A;  2SGE I;  1OYV I;  1K7V A;  1MT1 A;  3R5A A;  4E1P A;  3E2I A;  3UGL A;  2W0T A;  3UGD A;  1CE3 A;  2LB7 A;  2Y0M A;  4SGB I;  4UXJ A;  5J8F A;  1Z7K B;  3RU0 A;  2A20 A;  2JXD A;  1SGN I;  3OXF A;  5DAE A;  1PPF I;  2GVI A;  2WVJ A;  2CJS C;  1NUB A;  3FSX A;  3MEK A;  2E5R A;  2SGP I;  1MJB A;  4A24 A;  2KCX A;  2N1A B;  2ROW A;  2X52 A;  1YTP A;  1WGC A;  5FUV A;  2ELI A;  2NU0 I;  2JZM A;  2NU1 I;  2CWH A;  3GOX A;  1W4R A;  3R5D A;  4MPI A;  1HEV A;  1KMA A;  3OVO A;  2N17 A;  1CHO I;  3OL0 A;  3SEK C;  2XRC A;  2YUU A;  1SGD I;  2ARP F;  1UVF A;  3KY9 A;  2QQE A;  1UUC A;  2NU3 I;  5E3Q A;  3QAH A;  5FUX A;  4UXI A;  1CGI I;  1VDD A;  5EX3 A;  1TBQ R;  1DS2 I;  1OMU A;  2ORV A;  2P6A C;  1IY6 A;  2UVO A;  1PJU A;  1ULM A;  2DB6 A;  2L7X A;  2OVO A;  2KMQ A;  3UFF A;  1XX6 A;  2QQ0 A;  1HJA I;  3VDU A;  3FSY A;  2UZ3 A;  1ULN A;  1X4S A;  5CCL A;  2GKR I;  3UEJ A;  4FKD A;  1P9G A;  2OD1 A;  1Y1B A;  3VDP A;  1XA6 A;  2GKV A;  2PQ8 A;  1V1I A;  2GKT I;  1TBR R;  3TO6 A;  2SGQ I;  2X3T A;  3R5B A;  1CT4 I;  2K9H A;  4UXH A;  1FAR A;  2ENZ A;  1OMT A;  1W3S A;  1XBT A;  1OVO A;  1YU6 C;  2WCY A;  1P9Z A;  1SGR I;  3CXL A;  1R0R I;  3R5C A;  2B8T A;  3D00 A;  4E1R A;  5HI7 A;  3TO7 A;  5CCM A;  2M5X A;  2KMR A;  1FAQ A;  2BUS A;  3B4V C;  1H0Z A;  2QQD A;  1TOT A;  1UVG A;  2F3C I;  1PTQ A;  2NU2 I;  2SGF I;  2RC4 A;  3VE5 A;  2DIP A;  1KBF A;  1K7T A;  3BJI A;  1CT0 I;  2ORW A;  1IW4 A;  3E59 A;  3TOA A;  1TGS I;  5JHW C;  2L8E A;  2V1C C;  4DNC A;  1PTR A;  3OXL A;  5FUW A;  1Z2I A;  1AN1 I;  5HQ8 A;  2JYY A;  2JA1 A;  1SGQ I;  2N52 A;  1CGJ I;  2QPO A;  2WGC A;  2V1C A;  2OU2 A;  5E3R A;  3TOB A;  1R79 A;  1BUS A;  1U5K A;  1KBE A;  2DKV A;  1WTJ A;  1WGT A;  2ERW A;  2QQC A;  4WP4 A;  4HGU A;  2ENN A;  1BMO A;  2B0U C;  1LR9 A;  4GI3 C;  4OVO A;  3TO9 A;  1NXU A;  3UEY A;  3SGB I;  1CSO I;  2JW6 A;  1RFH A;  2V53 A;  1SGE I;  1PCE A;  2RIJ A;  3QWP A;  2VRW B;  4JCV E;  1TUR A;  1ULK A;  1SGY I;  1TUS A;  2FNF X;  2GIV A;  1FY7 A;  3SGQ I;  5E3P A;  1SGP I;  1CT2 I;  1MJA A;  1UHA A;  1LR8 A;  1S20 A;  2N71 A; 
#chains in the Genus database with same CATH homology
 1K7U A;  4AML A;  2LB7 A;  1K7T A;  2UVO A;  1ULM A;  7WGA A;  2CWG A;  1ULN A;  1P9G A;  2WGC A;  1WKX A;  2DKV A;  2X3T A;  1WGT A;  2X52 A;  1WGC A;  9WGA A;  1Q9B A;  1P9Z A;  4MPI A;  1HEV A;  1K7V A;  1ULK A;  1UHA A;  4WP4 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...